View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1343_high_148 (Length: 202)
Name: NF1343_high_148
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1343_high_148 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 8e-63; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 48414368 - 48414493
Alignment:
| Q |
1 |
catacatttactcaatttggatattcaaaaacaagttcagttcagactcttcagagggataatgatcttacaacttatctgttgcttcccttatctactc |
100 |
Q |
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| T |
48414368 |
catacatttattcaatttggatattcaaaaacaagttcagttcagactcttcagagggataatgatcttacaacttatctgttgcttcccttatctactc |
48414467 |
T |
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| Q |
101 |
cagtcaatattggtttcctttgtttc |
126 |
Q |
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| T |
48414468 |
cagtcaatattggtttcctttgtttc |
48414493 |
T |
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