View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1343_high_48 (Length: 466)

Name: NF1343_high_48
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1343_high_48
NF1343_high_48
[»] chr7 (41 HSPs)
chr7 (44-398)||(47119509-47119865)
chr7 (324-370)||(9332097-9332143)
chr7 (329-370)||(820542-820583)
chr7 (329-370)||(3561879-3561920)
chr7 (329-370)||(4969909-4969950)
chr7 (329-370)||(5909283-5909324)
chr7 (329-370)||(23982756-23982797)
chr7 (329-370)||(25709400-25709441)
chr7 (329-370)||(39757111-39757152)
chr7 (330-370)||(18102232-18102272)
chr7 (319-370)||(8091303-8091354)
chr7 (331-370)||(24462958-24462997)
chr7 (323-370)||(32117950-32117997)
chr7 (324-370)||(7040248-7040294)
chr7 (324-370)||(7170138-7170184)
chr7 (324-370)||(19889476-19889522)
chr7 (328-370)||(26050461-26050503)
chr7 (328-370)||(26059820-26059862)
chr7 (324-370)||(46290146-46290192)
chr7 (368-398)||(47294195-47294225)
chr7 (369-398)||(2960545-2960574)
chr7 (329-370)||(5833491-5833532)
chr7 (329-370)||(8595033-8595074)
chr7 (369-398)||(11476852-11476881)
chr7 (369-398)||(27772981-27773010)
chr7 (329-370)||(29398135-29398176)
chr7 (329-370)||(29692541-29692582)
chr7 (369-398)||(31684039-31684068)
chr7 (329-370)||(33343124-33343165)
chr7 (329-370)||(34270397-34270438)
chr7 (329-370)||(36548461-36548502)
chr7 (329-370)||(45501595-45501636)
chr7 (369-398)||(45723396-45723425)
chr7 (370-398)||(11476462-11476490)
chr7 (330-370)||(26037229-26037269)
chr7 (370-398)||(31684401-31684429)
chr7 (370-398)||(39033878-39033906)
chr7 (370-398)||(43968555-43968583)
chr7 (370-398)||(47218962-47218990)
chr7 (370-398)||(47281422-47281450)
chr7 (370-398)||(48629012-48629040)
[»] chr4 (47 HSPs)
chr4 (329-370)||(52391434-52391475)
chr4 (324-370)||(18882263-18882309)
chr4 (324-370)||(39876966-39877012)
chr4 (324-370)||(54495633-54495679)
chr4 (329-370)||(16667385-16667426)
chr4 (329-370)||(27362527-27362568)
chr4 (329-370)||(29190817-29190858)
chr4 (329-370)||(35999948-35999989)
chr4 (329-370)||(47326893-47326934)
chr4 (329-370)||(47341689-47341730)
chr4 (329-369)||(4779437-4779477)
chr4 (318-370)||(53376398-53376450)
chr4 (331-370)||(24684973-24685012)
chr4 (329-364)||(51691483-51691518)
chr4 (324-370)||(7349824-7349870)
chr4 (324-370)||(8736807-8736853)
chr4 (368-398)||(17847001-17847031)
chr4 (324-370)||(19468330-19468376)
chr4 (324-370)||(23553706-23553752)
chr4 (329-370)||(3085806-3085847)
chr4 (329-370)||(17409960-17410001)
chr4 (329-370)||(19450901-19450942)
chr4 (329-370)||(23545612-23545653)
chr4 (369-398)||(28264488-28264517)
chr4 (329-370)||(32279207-32279248)
chr4 (369-398)||(33173925-33173954)
chr4 (369-398)||(36444587-36444616)
chr4 (317-370)||(40049694-40049747)
chr4 (329-370)||(49228790-49228831)
chr4 (369-398)||(51371372-51371401)
chr4 (329-370)||(53961458-53961499)
chr4 (369-398)||(56555440-56555469)
chr4 (370-398)||(2055102-2055130)
chr4 (370-398)||(5227597-5227625)
chr4 (335-367)||(12499371-12499403)
chr4 (370-398)||(17847420-17847448)
chr4 (370-398)||(19169062-19169090)
chr4 (370-398)||(19496442-19496470)
chr4 (370-398)||(22298336-22298364)
chr4 (370-398)||(26017269-26017297)
chr4 (370-398)||(28160251-28160279)
chr4 (370-398)||(28264850-28264878)
chr4 (370-398)||(30141373-30141401)
chr4 (370-398)||(42273648-42273676)
chr4 (330-370)||(42479894-42479934)
chr4 (326-370)||(48910800-48910844)
chr4 (370-398)||(50276431-50276459)
[»] chr3 (47 HSPs)
chr3 (318-371)||(31318776-31318829)
chr3 (329-370)||(42180188-42180229)
chr3 (324-370)||(23523082-23523128)
chr3 (324-370)||(38389583-38389629)
chr3 (324-370)||(50204539-50204585)
chr3 (329-370)||(3863465-3863506)
chr3 (329-370)||(8165782-8165823)
chr3 (329-370)||(32553502-32553543)
chr3 (329-370)||(36426410-36426451)
chr3 (329-370)||(40930187-40930228)
chr3 (329-369)||(15269161-15269201)
chr3 (329-369)||(33474474-33474514)
chr3 (366-398)||(36315268-36315300)
chr3 (366-398)||(38446290-38446322)
chr3 (366-398)||(44152513-44152545)
chr3 (323-370)||(45983642-45983689)
chr3 (329-368)||(51618185-51618224)
chr3 (324-370)||(2571404-2571450)
chr3 (324-370)||(10307902-10307948)
chr3 (324-370)||(11611112-11611158)
chr3 (324-370)||(12515470-12515516)
chr3 (324-370)||(16875021-16875067)
chr3 (369-398)||(1016889-1016918)
chr3 (369-398)||(1448640-1448669)
chr3 (369-398)||(8097228-8097257)
chr3 (329-370)||(13495430-13495471)
chr3 (329-370)||(15862903-15862944)
chr3 (329-370)||(20938193-20938234)
chr3 (329-370)||(29686456-29686497)
chr3 (329-370)||(37055367-37055408)
chr3 (329-370)||(40497183-40497224)
chr3 (369-398)||(44152880-44152909)
chr3 (329-370)||(46492344-46492385)
chr3 (369-398)||(49799016-49799045)
chr3 (326-370)||(1569188-1569232)
chr3 (370-398)||(1687858-1687886)
chr3 (367-395)||(10618751-10618779)
chr3 (370-398)||(19664358-19664386)
chr3 (369-397)||(20086219-20086247)
chr3 (370-398)||(20760367-20760395)
chr3 (370-398)||(21564342-21564370)
chr3 (370-398)||(21656725-21656753)
chr3 (366-398)||(22851809-22851841)
chr3 (370-398)||(33151932-33151960)
chr3 (330-370)||(38277469-38277509)
chr3 (370-398)||(50287383-50287411)
chr3 (326-362)||(51567818-51567854)
[»] chr5 (32 HSPs)
chr5 (329-368)||(29855898-29855937)
chr5 (324-370)||(3398356-3398402)
chr5 (324-370)||(4047548-4047594)
chr5 (329-370)||(2795659-2795700)
chr5 (366-398)||(6252179-6252211)
chr5 (330-370)||(30893765-30893805)
chr5 (326-370)||(41350338-41350382)
chr5 (368-398)||(19659405-19659435)
chr5 (324-370)||(30839917-30839963)
chr5 (324-370)||(36597715-36597761)
chr5 (329-370)||(8103581-8103622)
chr5 (369-398)||(11001024-11001053)
chr5 (329-370)||(11636867-11636908)
chr5 (329-370)||(12641994-12642035)
chr5 (329-370)||(13515927-13515968)
chr5 (329-366)||(13713977-13714014)
chr5 (329-370)||(15191009-15191050)
chr5 (369-398)||(26593576-26593605)
chr5 (329-370)||(31365951-31365992)
chr5 (329-370)||(32019985-32020026)
chr5 (369-398)||(33003248-33003277)
chr5 (329-370)||(35469690-35469731)
chr5 (370-398)||(4016169-4016197)
chr5 (370-398)||(6600432-6600460)
chr5 (370-398)||(8215717-8215745)
chr5 (370-398)||(11935294-11935322)
chr5 (370-398)||(14717421-14717449)
chr5 (370-398)||(17002452-17002480)
chr5 (370-398)||(20408740-20408768)
chr5 (370-398)||(26035272-26035300)
chr5 (370-398)||(35861501-35861529)
chr5 (370-398)||(38964020-38964048)
[»] chr1 (44 HSPs)
chr1 (329-368)||(5879104-5879143)
chr1 (327-370)||(9516717-9516760)
chr1 (324-370)||(3168064-3168110)
chr1 (320-370)||(23576406-23576456)
chr1 (324-370)||(30172015-30172061)
chr1 (324-370)||(30187556-30187602)
chr1 (324-370)||(35512861-35512907)
chr1 (329-370)||(313885-313926)
chr1 (329-370)||(5875216-5875257)
chr1 (329-370)||(6180322-6180363)
chr1 (329-370)||(6569986-6570027)
chr1 (329-370)||(10896489-10896530)
chr1 (329-370)||(34802103-34802144)
chr1 (327-370)||(35438851-35438894)
chr1 (324-370)||(6307638-6307684)
chr1 (328-370)||(13241893-13241935)
chr1 (324-370)||(19066634-19066680)
chr1 (324-370)||(19114524-19114570)
chr1 (329-367)||(25465297-25465335)
chr1 (329-367)||(38812879-38812917)
chr1 (324-370)||(39150323-39150369)
chr1 (324-370)||(51382450-51382496)
chr1 (329-370)||(1502721-1502762)
chr1 (329-370)||(6754607-6754648)
chr1 (329-370)||(13322012-13322053)
chr1 (369-398)||(24204376-24204405)
chr1 (369-398)||(25800848-25800877)
chr1 (369-398)||(28425268-28425297)
chr1 (329-370)||(30288865-30288906)
chr1 (369-398)||(34971275-34971304)
chr1 (329-370)||(36490915-36490956)
chr1 (329-370)||(39310787-39310828)
chr1 (327-364)||(41676559-41676596)
chr1 (369-398)||(46051657-46051686)
chr1 (369-398)||(49594867-49594896)
chr1 (370-398)||(6711678-6711706)
chr1 (370-398)||(16508195-16508223)
chr1 (370-398)||(19274765-19274793)
chr1 (369-397)||(24036577-24036605)
chr1 (370-398)||(26549205-26549233)
chr1 (370-398)||(36157973-36158001)
chr1 (370-398)||(37217103-37217131)
chr1 (366-398)||(43396882-43396914)
chr1 (370-398)||(48802237-48802265)
[»] scaffold0111 (2 HSPs)
scaffold0111 (324-370)||(37110-37156)
scaffold0111 (329-370)||(41118-41159)
[»] scaffold0018 (1 HSPs)
scaffold0018 (324-370)||(182178-182224)
[»] chr8 (42 HSPs)
chr8 (324-370)||(10129239-10129285)
chr8 (324-370)||(13327937-13327983)
chr8 (324-370)||(27874677-27874723)
chr8 (324-370)||(28014854-28014900)
chr8 (324-370)||(38843840-38843886)
chr8 (315-364)||(11946907-11946956)
chr8 (329-370)||(13496710-13496751)
chr8 (329-370)||(18567417-18567458)
chr8 (329-370)||(22838361-22838402)
chr8 (329-370)||(38212945-38212986)
chr8 (329-369)||(40225988-40226028)
chr8 (324-370)||(3306051-3306097)
chr8 (324-370)||(6818153-6818199)
chr8 (324-370)||(7140455-7140501)
chr8 (324-370)||(9801804-9801850)
chr8 (324-370)||(14961659-14961705)
chr8 (368-398)||(24430475-24430505)
chr8 (324-370)||(26682204-26682250)
chr8 (324-370)||(31812249-31812295)
chr8 (329-370)||(1203737-1203778)
chr8 (329-370)||(2161523-2161564)
chr8 (329-370)||(5573422-5573463)
chr8 (329-370)||(8284569-8284610)
chr8 (369-398)||(9884672-9884701)
chr8 (329-370)||(12189589-12189630)
chr8 (329-370)||(12434017-12434058)
chr8 (321-370)||(26363983-26364032)
chr8 (369-398)||(33652048-33652077)
chr8 (329-370)||(39024858-39024899)
chr8 (329-370)||(39701804-39701845)
chr8 (369-398)||(41536432-41536461)
chr8 (318-370)||(4080384-4080436)
chr8 (318-370)||(4084533-4084585)
chr8 (318-370)||(4102840-4102892)
chr8 (370-398)||(5720427-5720455)
chr8 (370-398)||(8137338-8137366)
chr8 (370-398)||(15846955-15846983)
chr8 (366-398)||(24193579-24193611)
chr8 (370-398)||(24430868-24430896)
chr8 (370-398)||(35443518-35443546)
chr8 (370-398)||(43468909-43468937)
chr8 (330-370)||(44091454-44091494)
[»] chr2 (41 HSPs)
chr2 (324-370)||(8065259-8065305)
chr2 (324-370)||(16126555-16126601)
chr2 (329-370)||(6109525-6109566)
chr2 (329-370)||(6765136-6765177)
chr2 (366-398)||(920835-920867)
chr2 (329-369)||(5853464-5853504)
chr2 (326-370)||(8770884-8770928)
chr2 (329-369)||(16493533-16493573)
chr2 (330-370)||(19228561-19228601)
chr2 (330-370)||(26003348-26003388)
chr2 (366-398)||(37732095-37732127)
chr2 (367-398)||(7297168-7297199)
chr2 (324-367)||(43388477-43388520)
chr2 (357-398)||(3430517-3430559)
chr2 (329-367)||(11660895-11660933)
chr2 (324-370)||(12016802-12016848)
chr2 (324-370)||(16123414-16123460)
chr2 (324-370)||(24729573-24729619)
chr2 (324-370)||(27665040-27665086)
chr2 (317-371)||(34817880-34817934)
chr2 (324-370)||(36731316-36731362)
chr2 (324-370)||(38248416-38248462)
chr2 (369-398)||(2094316-2094345)
chr2 (329-370)||(9747453-9747494)
chr2 (329-370)||(15231967-15232008)
chr2 (329-370)||(20566018-20566059)
chr2 (369-398)||(36211254-36211283)
chr2 (329-370)||(43806496-43806537)
chr2 (370-398)||(2057132-2057160)
chr2 (366-398)||(8899888-8899920)
chr2 (330-370)||(15411624-15411664)
chr2 (329-369)||(22704674-22704714)
chr2 (370-398)||(23671718-23671746)
chr2 (370-398)||(27328791-27328819)
chr2 (370-398)||(28650332-28650360)
chr2 (324-364)||(29157825-29157865)
chr2 (367-395)||(31187442-31187470)
chr2 (367-395)||(31195502-31195530)
chr2 (370-398)||(37654301-37654329)
chr2 (370-398)||(37838504-37838532)
chr2 (370-398)||(38750864-38750892)
[»] scaffold0155 (1 HSPs)
scaffold0155 (329-370)||(3414-3455)
[»] scaffold0061 (1 HSPs)
scaffold0061 (329-370)||(52780-52821)
[»] scaffold0017 (1 HSPs)
scaffold0017 (329-370)||(145813-145854)
[»] scaffold0011 (1 HSPs)
scaffold0011 (329-370)||(13221-13262)
[»] chr6 (22 HSPs)
chr6 (329-370)||(10887165-10887206)
chr6 (329-370)||(29863303-29863344)
chr6 (329-370)||(34692490-34692531)
chr6 (329-367)||(8977467-8977505)
chr6 (324-370)||(13391811-13391857)
chr6 (324-370)||(17552583-17552629)
chr6 (332-370)||(20979108-20979146)
chr6 (368-398)||(26393305-26393335)
chr6 (329-370)||(2830682-2830723)
chr6 (329-370)||(3853079-3853120)
chr6 (329-370)||(6016992-6017033)
chr6 (369-398)||(12626843-12626872)
chr6 (329-370)||(14228127-14228168)
chr6 (329-370)||(18332689-18332730)
chr6 (329-370)||(24979150-24979191)
chr6 (329-370)||(27819628-27819669)
chr6 (329-370)||(28943770-28943811)
chr6 (329-370)||(31069583-31069624)
chr6 (329-370)||(31169764-31169805)
chr6 (329-370)||(31568245-31568286)
chr6 (329-370)||(32614945-32614986)
chr6 (370-398)||(2598006-2598034)
[»] scaffold0727 (1 HSPs)
scaffold0727 (324-370)||(5827-5873)
[»] scaffold0073 (1 HSPs)
scaffold0073 (324-370)||(16531-16577)
[»] scaffold1986 (1 HSPs)
scaffold1986 (369-398)||(293-322)
[»] scaffold0618 (1 HSPs)
scaffold0618 (330-370)||(8416-8456)
[»] scaffold0157 (1 HSPs)
scaffold0157 (335-367)||(21074-21106)
[»] scaffold0136 (1 HSPs)
scaffold0136 (330-370)||(1445-1485)
[»] scaffold0117 (1 HSPs)
scaffold0117 (370-398)||(14495-14523)


Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 44 - 398
Target Start/End: Original strand, 47119509 - 47119865
Alignment:
44 gaaaatgtcaattagtatattagatgaacgaatagtgcatgcaaacttctttcatatcaaacatttttctttttaataatatgtatgcatgccataaaac 143  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
47119509 gaaaatgtcaattagtatattagatgaacgaatagttcatgcaaacttctttcatatcaaacatttttgtttttaataatatgtatgcatgccataaaac 47119608  T
144 tacgag--ataacattgaggttcaaagtttacctctaaacacgtgtaatgttatgcattttttgtgaaaatgtagattgtcacttgatcttgggagtatg 241  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
47119609 tacgagctataacattgaggttcaaagtttacctctaaacacgtgtaatgttatgcattttttgtgaacatgtagattgtcacttgatcttgggagtatg 47119708  T
242 aaagtaagagaaaatttgaatccgcaacaacgttctaccactgaacttgaggatgaggtatagtcgatgtcattgataaaacaa-ggttttttctatcat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
47119709 aaagtaagagaaaatttgaatccgcaacaacgttctaccactgaacttgaggatgaggtatggtcgatgtcattgataaaacaagggttttttctatcat 47119808  T
341 gtgtaaatttgcacacgttaagaagtttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |   | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
47119809 g-caatatttgcacacgttaagaagtttaaggtcaaatgcatctaaaggtcctttaag 47119865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 9332143 - 9332097
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
9332143 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 9332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 820542 - 820583
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
820542 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 820583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 3561879 - 3561920
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
3561879 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 3561920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 4969950 - 4969909
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
4969950 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 4969909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 5909283 - 5909324
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
5909283 tttttctatcatgtgtaaatttgcacatgataagaagtttaa 5909324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 23982756 - 23982797
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
23982756 tttttctatcatgtgcaaatttgcacacgttaagaaatttaa 23982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 25709400 - 25709441
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
25709400 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 25709441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 39757111 - 39757152
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
39757111 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 39757152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 18102232 - 18102272
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
18102232 ttttctatcatgtgcaaatttgcacatgttaagaagtttaa 18102272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 8091303 - 8091354
Alignment:
319 aaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||| | ||||||||||||||| |||||| |||| ||||||||||||||    
8091303 aaaacaaaggtttttctatcatgtgcaaatttacacatgttaagaagtttaa 8091354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 24462958 - 24462997
Alignment:
331 tttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
24462958 tttctatcatgtgcaaatttgcacatgttaagaagtttaa 24462997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 32117997 - 32117950
Alignment:
323 caaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| ||||||||||||||| ||||||||||| |||||||| |||||    
32117997 caagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 32117950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 7040248 - 7040294
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||| ||||||||| ||||||||||| ||||||||||||||    
7040248 aagggtttttatatcatgtgcaaatttgcacatgttaagaagtttaa 7040294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 7170184 - 7170138
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||||||||    
7170184 aagggtttttctatcatgtgcaaatttgcacatgataagaagtttaa 7170138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 19889522 - 19889476
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||||||||    
19889522 aagggtttttctatcatgtgcaaatttgcacatgataagaagtttaa 19889476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 26050461 - 26050503
Alignment:
328 ttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||| ||||||||||| |||||||| |||||    
26050461 ttttttctatcatgtgcaaatttgcacatgttaagaaatttaa 26050503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 26059820 - 26059862
Alignment:
328 ttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||| ||||||||||| |||||||| |||||    
26059820 ttttttctatcatgtgcaaatttgcacatgttaagaaatttaa 26059862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 46290192 - 46290146
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
46290192 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 46290146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 398
Target Start/End: Original strand, 47294195 - 47294225
Alignment:
368 taaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||    
47294195 taaggtcaaatgcatctaaaggtcctttaag 47294225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 2960545 - 2960574
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
2960545 aaggtcaaatgcatctaaaggtcctttaag 2960574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 5833532 - 5833491
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
5833532 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaa 5833491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 8595074 - 8595033
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
8595074 tttttctatcatgtgcaaatttacacatgttaagaagtttaa 8595033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 11476881 - 11476852
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
11476881 aaggtcaaatgcatctaaaggtcctttaag 11476852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 27772981 - 27773010
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
27772981 aaggtcaaatgcatctaaaggtcctttaag 27773010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 29398135 - 29398176
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||  ||||||||||| ||||||||||||||    
29398135 tttttctatcatgttcaaatttgcacatgttaagaagtttaa 29398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 29692541 - 29692582
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||    
29692541 tttttctatcatgtgcaaatttgtacatgttaagaagtttaa 29692582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 31684039 - 31684068
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
31684039 aaggtcaaatgcatctaaaggtcctttaag 31684068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 33343165 - 33343124
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
33343165 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 33343124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 34270438 - 34270397
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
34270438 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 34270397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 36548461 - 36548502
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||    
36548461 tttttttatcatgtgcaaatttgcacatgttaagaagtttaa 36548502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 45501636 - 45501595
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||||||||  |||||||||||||    
45501636 tttttctatcatgtgcaaatttgcacatcttaagaagtttaa 45501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 45723396 - 45723425
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
45723396 aaggtcaaatgcatctaaaggtcctttaag 45723425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 11476462 - 11476490
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
11476462 aggtcaaatgcatctaaaggtcctttaag 11476490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 26037269 - 26037229
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||| ||||||||| | ||||||||||||||    
26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaa 26037229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 31684429 - 31684401
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
31684429 aggtcaaatgcatctaaaggtcctttaag 31684401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 39033878 - 39033906
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
39033878 aggtcaaatgcatctaaaggtcctttaag 39033906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 43968583 - 43968555
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
43968583 aggtcaaatgcatctaaaggtcctttaag 43968555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 47218962 - 47218990
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
47218962 aggtcaaatgcatctaaaggtcctttaag 47218990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 47281450 - 47281422
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
47281450 aggtcaaatgcatctaaaggtcctttaag 47281422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 48629040 - 48629012
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
48629040 aggtcaaatgcatctaaaggtcctttaag 48629012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 52391475 - 52391434
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaa 52391434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 18882263 - 18882309
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
18882263 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 18882309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 39877012 - 39876966
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||    
39877012 aagggtttttctatcatgtgtaaatttgcacatgttaagaaatttaa 39876966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 54495633 - 54495679
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
54495633 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 54495679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 16667385 - 16667426
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
16667385 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 16667426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 27362568 - 27362527
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
27362568 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 27362527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 29190817 - 29190858
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
29190817 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 29190858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 35999948 - 35999989
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
35999948 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 35999989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 47326893 - 47326934
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
47326893 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 47326934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 47341689 - 47341730
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
47341689 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 47341730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 4779437 - 4779477
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttta 369  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
4779437 tttttctatcatgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 53376398 - 53376450
Alignment:
318 taaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| |||| ||||| ||||||||| ||||||||||| ||||||||||||||    
53376398 taaaataagggtttttttatcatgtgaaaatttgcacatgttaagaagtttaa 53376450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 24685012 - 24684973
Alignment:
331 tttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaa 24684973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 364
Target Start/End: Complemental strand, 51691518 - 51691483
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaa 364  Q
    ||||||||||||||||||||||||||| ||||||||    
51691518 tttttctatcatgtgtaaatttgcacatgttaagaa 51691483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 7349870 - 7349824
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||||||||||| ||| | ||||||||||||    
7349870 aagggtttttctatcatgtgtaaatttgtacatgataagaagtttaa 7349824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 8736807 - 8736853
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| |||||||||| |||||||||||||||| |||||||| |||||    
8736807 aagggtttttctatcgtgtgtaaatttgcacatgttaagaaatttaa 8736853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 398
Target Start/End: Original strand, 17847001 - 17847031
Alignment:
368 taaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||    
17847001 taaggtcaaatgcatctaaaggtcctttaag 17847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 19468376 - 19468330
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||| ||||| ||||||||||| ||||||||||||||    
19468376 aagggtttttctattatgtgcaaatttgcacatgttaagaagtttaa 19468330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 23553752 - 23553706
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||| ||||||||    
23553752 aaggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaa 23553706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 3085847 - 3085806
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||||||||  |||||||||||||    
3085847 tttttctatcatgtgcaaatttgcacattttaagaagtttaa 3085806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 17410001 - 17409960
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
17410001 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 17409960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 19450901 - 19450942
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||    
19450901 tttttctattatgtgcaaatttgcacatgttaagaagtttaa 19450942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 23545653 - 23545612
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
23545653 tttttctatcatgtgcaaatttgcacatgttaataagtttaa 23545612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 28264488 - 28264517
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
28264488 aaggtcaaatgcatctaaaggtcctttaag 28264517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 32279248 - 32279207
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||    
32279248 tttttttatcatgtgtaaatttgcacatgttaaaaagtttaa 32279207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 33173925 - 33173954
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
33173925 aaggtcaaatgcatctaaaggtcctttaag 33173954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 36444587 - 36444616
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
36444587 aaggtcaaatgcatctaaaggtcctttaag 36444616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 40049747 - 40049694
Alignment:
317 ataaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||    
40049747 ataaaaaaagggtttttctattatgtgcaaatttgcacatgttaagaaatttaa 40049694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 49228831 - 49228790
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||  ||||||||||||||    
49228831 tttttctatcatgtgcaaatttgcacgtgttaagaagtttaa 49228790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 51371401 - 51371372
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
51371401 aaggtcaaatgcatctaaaggtcctttaag 51371372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 53961499 - 53961458
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||| |||| ||||||||||| ||||||||||||||    
53961499 tttttctatcgtgtgcaaatttgcacatgttaagaagtttaa 53961458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 56555469 - 56555440
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
56555469 aaggtcaaatgcatctaaaggtcctttaag 56555440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 2055102 - 2055130
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
2055102 aggtcaaatgcatctaaaggtcctttaag 2055130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 5227625 - 5227597
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
5227625 aggtcaaatgcatctaaaggtcctttaag 5227597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 12499403 - 12499371
Alignment:
335 tatcatgtgtaaatttgcacacgttaagaagtt 367  Q
    ||||||||||||||||||||| |||||||||||    
12499403 tatcatgtgtaaatttgcacatgttaagaagtt 12499371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 17847448 - 17847420
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
17847448 aggtcaaatgcatctaaaggtcctttaag 17847420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 19169090 - 19169062
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
19169090 aggtcaaatgcatctaaaggtcctttaag 19169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 19496470 - 19496442
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
19496470 aggtcaaatgcatctaaaggtcctttaag 19496442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 22298336 - 22298364
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
22298336 aggtcaaatgcatctaaaggtcctttaag 22298364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 26017269 - 26017297
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
26017269 aggtcaaatgcatctaaaggtcctttaag 26017297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 28160279 - 28160251
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
28160279 aggtcaaatgcatctaaaggtcctttaag 28160251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 28264878 - 28264850
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
28264878 aggtcaaatgcatctaaaggtcctttaag 28264850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 30141401 - 30141373
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
30141401 aggtcaaatgcatctaaaggtcctttaag 30141373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 42273648 - 42273676
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
42273648 aggtcaaatgcatctaaaggtcctttaag 42273676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 42479894 - 42479934
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||| ||||||||||| |||||||| |||||    
42479894 ttttctatcatgtgcaaatttgcacatgttaagaaatttaa 42479934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 48910800 - 48910844
Alignment:
326 ggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| || ||||||||| | ||||||||||||||    
48910800 ggttttttctatcatatgcaaatttgcatatgttaagaagtttaa 48910844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 50276459 - 50276431
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
50276459 aggtcaaatgcatctaaaggtcctttaag 50276431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 31318829 - 31318776
Alignment:
318 taaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaag 371  Q
    ||||| || ||||||||||||||||| ||||||||||| |||||||||||||||    
31318829 taaaaaaatgttttttctatcatgtgaaaatttgcacatgttaagaagtttaag 31318776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 42180229 - 42180188
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
42180229 tttttctatcatgtgtaaatttgcacatgttaagaagtttaa 42180188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 23523128 - 23523082
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
23523128 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 23523082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 38389629 - 38389583
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
38389629 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 38389583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 50204585 - 50204539
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
50204585 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 50204539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 3863506 - 3863465
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
3863506 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 3863465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 8165823 - 8165782
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
8165823 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 8165782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 32553543 - 32553502
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
32553543 tttttctatcatgtgtaaatttacacatgttaagaagtttaa 32553502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 36426410 - 36426451
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
36426410 tttttctatcatgtgtaaatttacacatgttaagaagtttaa 36426451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 40930228 - 40930187
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
40930228 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 40930187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 15269161 - 15269201
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttta 369  Q
    |||||||||||| |||||||||||||| |||||||||||||    
15269161 tttttctatcatatgtaaatttgcacatgttaagaagttta 15269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 33474474 - 33474514
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttta 369  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
33474474 tttttctatcatgtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 36315300 - 36315268
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||||    
36315300 tttaaggtcaaatgcatctaaaggtcctttaag 36315268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 38446290 - 38446322
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||||    
38446290 tttaaggtcaaatgcatctaaaggtcctttaag 38446322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 44152513 - 44152545
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||||    
44152513 tttaaggtcaaatgcatctaaaggtcctttaag 44152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 45983689 - 45983642
Alignment:
323 caaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| ||||| ||||||||| ||||||||||| ||||||||||||||    
45983689 caagggtttttttatcatgtgcaaatttgcacaggttaagaagtttaa 45983642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 368
Target Start/End: Complemental strand, 51618224 - 51618185
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttt 368  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
51618224 tttttctatcatgtgcaaatttgcacatgttaagaagttt 51618185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 2571450 - 2571404
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
2571450 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 2571404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 10307948 - 10307902
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
10307948 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 10307902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 11611158 - 11611112
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||||||||    
11611158 aagggtttttctatcatgtgcaaatttgcacatgataagaagtttaa 11611112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 12515470 - 12515516
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||||||||||||||| ||||| || |||||    
12515470 aagggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaa 12515516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 16875021 - 16875067
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||    
16875021 aagggtttttctatcgtgtgcaaatttgcacatgttaagaagtttaa 16875067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 1016889 - 1016918
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
1016889 aaggtcaaatgcatctaaaggtcctttaag 1016918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 1448640 - 1448669
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
1448640 aaggtcaaatgcatctaaaggtcctttaag 1448669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 8097257 - 8097228
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
8097257 aaggtcaaatgcatctaaaggtcctttaag 8097228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 13495471 - 13495430
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
13495471 tttttctatcatgtgaaaatttgcacatgataagaagtttaa 13495430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 15862903 - 15862944
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||| ||||| |||||| |||||||    
15862903 tttttctatcatgtgtaaattcgcacatgttaaggagtttaa 15862944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 20938234 - 20938193
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
20938234 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 20938193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 29686497 - 29686456
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
29686497 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 29686456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 37055367 - 37055408
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||||||||  |||||||||||||    
37055367 tttttctatcatgtgaaaatttgcacatattaagaagtttaa 37055408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 40497224 - 40497183
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
40497224 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 40497183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 44152909 - 44152880
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
44152909 aaggtcaaatgcatctaaaggtcctttaag 44152880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 46492344 - 46492385
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||| ||||||||||||| |||||    
46492344 tttttctatcatgtgcaaattttcacacgttaagaaatttaa 46492385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 49799016 - 49799045
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
49799016 aaggtcaaatgcatctaaaggtcctttaag 49799045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 1569188 - 1569232
Alignment:
326 ggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||| |||||| | ||| ||||||||||||||    
1569188 ggttttttctatcatgtataaattcgtacatgttaagaagtttaa 1569232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 1687886 - 1687858
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
1687886 aggtcaaatgcatctaaaggtcctttaag 1687858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 395
Target Start/End: Complemental strand, 10618779 - 10618751
Alignment:
367 ttaaggtcaaatgcatctaaaggtccttt 395  Q
    |||||||||||||||||||||||||||||    
10618779 ttaaggtcaaatgcatctaaaggtccttt 10618751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 19664358 - 19664386
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
19664358 aggtcaaatgcatctaaaggtcctttaag 19664386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Original strand, 20086219 - 20086247
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaa 397  Q
    |||||||||||||||||||||||||||||    
20086219 aaggtcaaatgcatctaaaggtcctttaa 20086247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 20760395 - 20760367
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
20760395 aggtcaaatgcatctaaaggtcctttaag 20760367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 21564342 - 21564370
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
21564342 aggtcaaatgcatctaaaggtcctttaag 21564370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 21656753 - 21656725
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
21656753 aggtcaaatgcatctaaaggtcctttaag 21656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 22851809 - 22851841
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||| |||||    
22851809 tttaaggtcaaatgcatctaaaggtccgttaag 22851841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 33151960 - 33151932
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
33151960 aggtcaaatgcatctaaaggtcctttaag 33151932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 38277509 - 38277469
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||  ||||||||||||||||| ||||||||||||||    
38277509 ttttctacgatgtgtaaatttgcacatgttaagaagtttaa 38277469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 50287383 - 50287411
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
50287383 aggtcaaatgcatctaaaggtcctttaag 50287411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 51567818 - 51567854
Alignment:
326 ggttttttctatcatgtgtaaatttgcacacgttaag 362  Q
    |||||||||||||||||| ||||||||||| ||||||    
51567818 ggttttttctatcatgtgcaaatttgcacatgttaag 51567854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 368
Target Start/End: Original strand, 29855898 - 29855937
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttt 368  Q
    ||||||||||||||||||||||||||| ||||||||||||    
29855898 tttttctatcatgtgtaaatttgcacatgttaagaagttt 29855937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 3398402 - 3398356
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
3398402 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 3398356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 4047594 - 4047548
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
4047594 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 4047548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 2795700 - 2795659
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
2795700 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 2795659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 6252211 - 6252179
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||||    
6252211 tttaaggtcaaatgcatctaaaggtcctttaag 6252179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 30893805 - 30893765
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaa 30893765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 41350382 - 41350338
Alignment:
326 ggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||    
41350382 ggttttttttatcatgtgcaaatttgcacatgttaagaagtttaa 41350338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 398
Target Start/End: Original strand, 19659405 - 19659435
Alignment:
368 taaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||    
19659405 taaggtcaaatgcatctaaaggtcctttaag 19659435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 30839963 - 30839917
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
30839963 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 30839917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 36597761 - 36597715
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
36597761 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 36597715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 8103581 - 8103622
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
8103581 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 8103622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 11001053 - 11001024
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
11001053 aaggtcaaatgcatctaaaggtcctttaag 11001024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 11636908 - 11636867
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
11636908 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 11636867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 12641994 - 12642035
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||    
12641994 tttttctataatgtgcaaatttgcacatgttaagaagtttaa 12642035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 13515927 - 13515968
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||||||| ||||| || |||||    
13515927 tttttctatcatgtgtaaatttgcacatgttaacaaatttaa 13515968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 13714014 - 13713977
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagt 366  Q
    |||||| |||||||||||||||||||| ||||||||||    
13714014 tttttccatcatgtgtaaatttgcacaagttaagaagt 13713977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 15191050 - 15191009
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| |||||||| |||||||||||| ||||||||||||||    
15191050 tttttttatcatgtataaatttgcacatgttaagaagtttaa 15191009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 26593605 - 26593576
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
26593605 aaggtcaaatgcatctaaaggtcctttaag 26593576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 31365951 - 31365992
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||    
31365951 tttttctatcatgtgcaaatttgtacatgttaagaagtttaa 31365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 32019985 - 32020026
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
32019985 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 32020026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 33003277 - 33003248
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
33003277 aaggtcaaatgcatctaaaggtcctttaag 33003248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 35469731 - 35469690
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||||||| ||||| || |||||    
35469731 tttttctatcatgtgtaaatttgcacatgttaaaaaatttaa 35469690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 4016197 - 4016169
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
4016197 aggtcaaatgcatctaaaggtcctttaag 4016169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 6600460 - 6600432
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
6600460 aggtcaaatgcatctaaaggtcctttaag 6600432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 8215717 - 8215745
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
8215717 aggtcaaatgcatctaaaggtcctttaag 8215745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 11935294 - 11935322
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
11935294 aggtcaaatgcatctaaaggtcctttaag 11935322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 14717421 - 14717449
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
14717421 aggtcaaatgcatctaaaggtcctttaag 14717449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 17002480 - 17002452
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
17002480 aggtcaaatgcatctaaaggtcctttaag 17002452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 20408768 - 20408740
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
20408768 aggtcaaatgcatctaaaggtcctttaag 20408740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 26035272 - 26035300
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
26035272 aggtcaaatgcatctaaaggtcctttaag 26035300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 35861529 - 35861501
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
35861529 aggtcaaatgcatctaaaggtcctttaag 35861501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 38964020 - 38964048
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
38964020 aggtcaaatgcatctaaaggtcctttaag 38964048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 368
Target Start/End: Original strand, 5879104 - 5879143
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttt 368  Q
    ||||||||||||||||||||||||||| ||||||||||||    
5879104 tttttctatcatgtgtaaatttgcacatgttaagaagttt 5879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 9516760 - 9516717
Alignment:
327 gttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||||||||| |||||||| |||||    
9516760 gttttttctatcatgtgtaaatttgcacatgttaagaaatttaa 9516717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 3168064 - 3168110
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||    
3168064 aagggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaa 3168110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 23576406 - 23576456
Alignment:
320 aaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||| |||||    
23576406 aaacaagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 23576456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 30172061 - 30172015
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
30172061 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 30172015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 30187602 - 30187556
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
30187602 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 30187556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 35512907 - 35512861
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
35512907 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 35512861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 313926 - 313885
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
313926 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 313885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 5875216 - 5875257
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
5875216 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 5875257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 6180363 - 6180322
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
6180363 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 6180322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 6569986 - 6570027
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
6569986 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 6570027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 10896530 - 10896489
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
10896530 tttttctatcatgtgtaaaattgcacatgttaagaagtttaa 10896489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 34802144 - 34802103
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
34802144 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 34802103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 35438894 - 35438851
Alignment:
327 gttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||    
35438894 gttttttctatcatgtgcaaatttgcacatgttaagaaatttaa 35438851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 6307684 - 6307638
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||| ||||||||| ||||||||||| ||||||||||||||    
6307684 aagggtttttatatcatgtgcaaatttgcacatgttaagaagtttaa 6307638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 13241935 - 13241893
Alignment:
328 ttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||| ||||||||||| |||||||| |||||    
13241935 ttttttctatcatgtgaaaatttgcacatgttaagaaatttaa 13241893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 19066680 - 19066634
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| |||||||||||||| |||||||||||| ||||| ||||||||    
19066680 aagggtttttctatcatgtataaatttgcacatgttaaaaagtttaa 19066634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 19114570 - 19114524
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| |||||||||||||| |||||||||||| ||||| ||||||||    
19114570 aagggtttttctatcatgtataaatttgcacatgttaaaaagtttaa 19114524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 367
Target Start/End: Complemental strand, 25465335 - 25465297
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtt 367  Q
    ||||||||||||||| ||||||||||| |||||||||||    
25465335 tttttctatcatgtgcaaatttgcacatgttaagaagtt 25465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 367
Target Start/End: Complemental strand, 38812917 - 38812879
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtt 367  Q
    ||||||||||||||| ||||||||||| |||||||||||    
38812917 tttttctatcatgtgcaaatttgcacatgttaagaagtt 38812879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 39150323 - 39150369
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||||||||    
39150323 aagggtttttctatcatgtgcaaatttgcacatgataagaagtttaa 39150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 51382496 - 51382450
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| || |||||||| ||||||||||||||    
51382496 aagggtttttctatcatgtgcaactttgcacatgttaagaagtttaa 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 1502721 - 1502762
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
1502721 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 1502762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 6754648 - 6754607
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
6754648 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 6754607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 13322053 - 13322012
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||| | ||||||||||||||    
13322053 tttttctatcatgtgcaaatttgcatatgttaagaagtttaa 13322012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 24204376 - 24204405
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
24204376 aaggtcaaatgcatctaaaggtcctttaag 24204405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 25800877 - 25800848
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
25800877 aaggtcaaatgcatctaaaggtcctttaag 25800848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 28425268 - 28425297
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
28425268 aaggtcaaatgcatctaaaggtcctttaag 28425297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 30288865 - 30288906
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
30288865 tttttctatcatgtgcaaatttacacatgttaagaagtttaa 30288906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 34971304 - 34971275
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
34971304 aaggtcaaatgcatctaaaggtcctttaag 34971275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 36490956 - 36490915
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||| | ||||||||||| ||||||||||||||    
36490956 tttttctatcatgagcaaatttgcacatgttaagaagtttaa 36490915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 39310787 - 39310828
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
39310787 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaa 39310828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 41676559 - 41676596
Alignment:
327 gttttttctatcatgtgtaaatttgcacacgttaagaa 364  Q
    ||||||||||||||||| ||||||||||| ||||||||    
41676559 gttttttctatcatgtgcaaatttgcacatgttaagaa 41676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 46051686 - 46051657
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
46051686 aaggtcaaatgcatctaaaggtcctttaag 46051657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 49594867 - 49594896
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
49594867 aaggtcaaatgcatctaaaggtcctttaag 49594896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 6711706 - 6711678
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
6711706 aggtcaaatgcatctaaaggtcctttaag 6711678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 16508223 - 16508195
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
16508223 aggtcaaatgcatctaaaggtcctttaag 16508195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 19274793 - 19274765
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
19274793 aggtcaaatgcatctaaaggtcctttaag 19274765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Original strand, 24036577 - 24036605
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaa 397  Q
    |||||||||||||||||||||||||||||    
24036577 aaggtcaaatgcatctaaaggtcctttaa 24036605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 26549205 - 26549233
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
26549205 aggtcaaatgcatctaaaggtcctttaag 26549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 36158001 - 36157973
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
36158001 aggtcaaatgcatctaaaggtcctttaag 36157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 37217131 - 37217103
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
37217131 aggtcaaatgcatctaaaggtcctttaag 37217103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 43396914 - 43396882
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||| ||||||||||    
43396914 tttaaggtcaaatgcatctaaaagtcctttaag 43396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 48802237 - 48802265
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
48802237 aggtcaaatgcatctaaaggtcctttaag 48802265  T

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Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 37110 - 37156
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
37110 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 37156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 41159 - 41118
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||| | | ||||||||||||||    
41159 tttttctatcatgtgtaaatttgtatatgttaagaagtttaa 41118  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 182224 - 182178
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||    
182224 aagggtttttctatcatgtgtaaatttgtacatgttaagaagtttaa 182178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 10129285 - 10129239
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
10129285 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 10129239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 13327937 - 13327983
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
13327937 aaggatttttctatcatgtgcaaatttgcacatgttaagaagtttaa 13327983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 27874677 - 27874723
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
27874677 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 27874723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 28014854 - 28014900
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
28014854 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 28014900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 38843886 - 38843840
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||    
38843886 aagggtttttctatcatgtgtaaatttgcacatgctaagaagtttaa 38843840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 11946907 - 11946956
Alignment:
315 tgataaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaa 364  Q
    |||||||| | || ||||||||||||||||||||||||||| ||||||||    
11946907 tgataaaatatggatttttctatcatgtgtaaatttgcacatgttaagaa 11946956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 13496710 - 13496751
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
13496710 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 13496751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 18567417 - 18567458
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
18567417 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 18567458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 22838402 - 22838361
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
22838402 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 22838361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 38212945 - 38212986
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
38212945 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 38212986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 40225988 - 40226028
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttta 369  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
40225988 tttttctatcatgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 3306051 - 3306097
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
3306051 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 3306097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 6818199 - 6818153
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||| ||| ||||||||||||||    
6818199 aagggtttttctatcatgtgcaaatttgtacatgttaagaagtttaa 6818153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 7140455 - 7140501
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||    
7140455 aagggtttttctatcatgtgcaaatttgcacatattaagaagtttaa 7140501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 9801850 - 9801804
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| |||||| |||||||| ||||||||||| ||||||||||||||    
9801850 aagggtttttcaatcatgtgcaaatttgcacatgttaagaagtttaa 9801804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 14961659 - 14961705
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||||||||    
14961659 aagggtttttctatcatgtgcaaatttgcacatgctaagaagtttaa 14961705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 398
Target Start/End: Original strand, 24430475 - 24430505
Alignment:
368 taaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||    
24430475 taaggtcaaatgcatctaaaggtcctttaag 24430505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 26682250 - 26682204
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
26682250 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 26682204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 31812295 - 31812249
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||    
31812295 aagggtttttctatcatgtgcaaatttgcacatattaagaagtttaa 31812249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 1203778 - 1203737
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
1203778 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 1203737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 2161564 - 2161523
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
2161564 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 2161523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 5573463 - 5573422
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||    
5573463 tttttctatcatgtgcaaatttgtacatgttaagaagtttaa 5573422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 8284569 - 8284610
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||    
8284569 tttttctatcatgtgcaaatttgtacatgttaagaagtttaa 8284610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 9884672 - 9884701
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
9884672 aaggtcaaatgcatctaaaggtcctttaag 9884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 12189589 - 12189630
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
12189589 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 12189630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 12434017 - 12434058
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
12434017 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 12434058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 26363983 - 26364032
Alignment:
321 aacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||| ||||||||||||||| |||||||| || |||||||| |||||    
26363983 aacaagggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaa 26364032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 33652077 - 33652048
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
33652077 aaggtcaaatgcatctaaaggtcctttaag 33652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 39024858 - 39024899
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
39024858 tttttctatcatgtgcaaatttgcacatgataagaagtttaa 39024899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 39701804 - 39701845
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
39701804 tttttctatcatgtgcaaatttgcacatgttaacaagtttaa 39701845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 41536432 - 41536461
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
41536432 aaggtcaaatgcatctaaaggtcctttaag 41536461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 4080384 - 4080436
Alignment:
318 taaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| |||| ||||||||||||||| ||||||||||| | |||||| |||||    
4080384 taaaaaaaggatttttctatcatgtgcaaatttgcacatgataagaaatttaa 4080436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 4084533 - 4084585
Alignment:
318 taaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| |||| ||||||||||||||| ||||||||||| | |||||| |||||    
4084533 taaaaaaaggatttttctatcatgtgcaaatttgcacatgataagaaatttaa 4084585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 4102840 - 4102892
Alignment:
318 taaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||| |||| ||||||||||||||| ||||||||||| | |||||| |||||    
4102840 taaaaaaaggatttttctatcatgtgcaaatttgcacatgataagaaatttaa 4102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 5720427 - 5720455
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
5720427 aggtcaaatgcatctaaaggtcctttaag 5720455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 8137366 - 8137338
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
8137366 aggtcaaatgcatctaaaggtcctttaag 8137338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 15846955 - 15846983
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
15846955 aggtcaaatgcatctaaaggtcctttaag 15846983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 24193611 - 24193579
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||| |||||||||||||||    
24193611 tttaaggtcaaatgcatttaaaggtcctttaag 24193579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 24430896 - 24430868
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
24430896 aggtcaaatgcatctaaaggtcctttaag 24430868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 35443546 - 35443518
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
35443546 aggtcaaatgcatctaaaggtcctttaag 35443518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 43468909 - 43468937
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
43468909 aggtcaaatgcatctaaaggtcctttaag 43468937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 44091494 - 44091454
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||||||||||| | |||||||| |||||    
44091494 ttttctatcatgtgtaaatttgcatatgttaagaaatttaa 44091454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 8065305 - 8065259
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
8065305 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 8065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 16126555 - 16126601
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
16126555 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 16126601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 6109566 - 6109525
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
6109566 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 6109525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 6765177 - 6765136
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
6765177 tttttctatcatgtgtagatttgcacatgttaagaagtttaa 6765136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 920835 - 920867
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||||    
920835 tttaaggtcaaatgcatctaaaggtcctttaag 920867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 5853464 - 5853504
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttta 369  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
5853464 tttttctatcatgtgcaaatttgcacatgttaagaagttta 5853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 8770884 - 8770928
Alignment:
326 ggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||    
8770884 ggttttttttatcatgtgcaaatttgcacatgttaagaagtttaa 8770928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 16493533 - 16493573
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttta 369  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
16493533 tttttctatcatgtgcaaatttgcacatgttaagaagttta 16493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 19228601 - 19228561
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaa 19228561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 26003348 - 26003388
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
26003348 ttttctatcatgtgcaaatttgcacatgttaagaagtttaa 26003388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 37732095 - 37732127
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||||    
37732095 tttaaggtcaaatgcatctaaaggtcctttaag 37732127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 398
Target Start/End: Original strand, 7297168 - 7297199
Alignment:
367 ttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||||    
7297168 ttaaggtcaaatgcatctaaaggtcctttaag 7297199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 367
Target Start/End: Original strand, 43388477 - 43388520
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtt 367  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
43388477 aagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 43388520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 398
Target Start/End: Original strand, 3430517 - 3430559
Alignment:
357 gttaagaagtttaa-ggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
3430517 gttaagaagtttaaaggtcaaatgcatctaaaggttctttaag 3430559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 367
Target Start/End: Original strand, 11660895 - 11660933
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtt 367  Q
    ||||||||||||||| ||||||||||| |||||||||||    
11660895 tttttctatcatgtgcaaatttgcacatgttaagaagtt 11660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 12016848 - 12016802
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||    
12016848 aagggtttttctatcatgtgcaaatttgcacatattaagaagtttaa 12016802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 16123460 - 16123414
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||||||||    
16123460 aaggatttttctatcatgtgcaaatttgcacatgataagaagtttaa 16123414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 24729573 - 24729619
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
24729573 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 24729619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 27665040 - 27665086
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||||||||    
27665040 aagggtttttctatcatgtgcaaatttgcacatgataagaagtttaa 27665086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 34817934 - 34817880
Alignment:
317 ataaaacaaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaag 371  Q
    ||||||| ||| ||||||||||||||| ||| || |||| |||||||||||||||    
34817934 ataaaactagggtttttctatcatgtgcaaacttacacatgttaagaagtttaag 34817880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 36731362 - 36731316
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| |||||||||||||||||||||| |||| |||||||| |||||    
36731362 aagggtttttctatcatgtgtaaatttacacatgttaagaaatttaa 36731316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 38248416 - 38248462
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
38248416 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 38248462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Original strand, 2094316 - 2094345
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
2094316 aaggtcaaatgcatctaaaggtcctttaag 2094345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 9747494 - 9747453
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
9747494 tttttctatcatgtgcaaattttcacatgttaagaagtttaa 9747453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 15232008 - 15231967
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||    
15232008 tttttctattatgtgcaaatttgcacatgttaagaagtttaa 15231967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 20566018 - 20566059
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
20566018 tttttctatcatgtgcaaatttacacatgttaagaagtttaa 20566059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 36211283 - 36211254
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
36211283 aaggtcaaatgcatctaaaggtcctttaag 36211254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 43806537 - 43806496
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||| |||||||||||||||| ||||| ||||||||    
43806537 tttttctatcgtgtgtaaatttgcacatgttaaaaagtttaa 43806496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 2057160 - 2057132
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
2057160 aggtcaaatgcatctaaaggtcctttaag 2057132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 8899920 - 8899888
Alignment:
366 tttaaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||| ||||||||||||||||||||||||||||    
8899920 tttatggtcaaatgcatctaaaggtcctttaag 8899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 15411624 - 15411664
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||| |||||| ||||||||||| ||||||||||||||    
15411624 ttttctaacatgtgcaaatttgcacatgttaagaagtttaa 15411664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 369
Target Start/End: Complemental strand, 22704714 - 22704674
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagttta 369  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
22704714 tttttctatcatgtgcaaatttgcacatcttaagaagttta 22704674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 23671718 - 23671746
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
23671718 aggtcaaatgcatctaaaggtcctttaag 23671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 27328819 - 27328791
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
27328819 aggtcaaatgcatctaaaggtcctttaag 27328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 28650332 - 28650360
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
28650332 aggtcaaatgcatctaaaggtcctttaag 28650360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 29157825 - 29157865
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaa 364  Q
    |||| ||||||||||||||| ||||||||||| ||||||||    
29157825 aagggtttttctatcatgtgcaaatttgcacatgttaagaa 29157865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 395
Target Start/End: Complemental strand, 31187470 - 31187442
Alignment:
367 ttaaggtcaaatgcatctaaaggtccttt 395  Q
    |||||||||||||||||||||||||||||    
31187470 ttaaggtcaaatgcatctaaaggtccttt 31187442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 395
Target Start/End: Complemental strand, 31195530 - 31195502
Alignment:
367 ttaaggtcaaatgcatctaaaggtccttt 395  Q
    |||||||||||||||||||||||||||||    
31195530 ttaaggtcaaatgcatctaaaggtccttt 31195502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 37654329 - 37654301
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
37654329 aggtcaaatgcatctaaaggtcctttaag 37654301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 37838532 - 37838504
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
37838532 aggtcaaatgcatctaaaggtcctttaag 37838504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 38750864 - 38750892
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
38750864 aggtcaaatgcatctaaaggtcctttaag 38750892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 3414 - 3455
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||||||||||||||  |||||||||||||    
3414 tttttctatcatgtgtaaatttgcacatattaagaagtttaa 3455  T

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Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 52780 - 52821
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
52780 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 52821  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 145854 - 145813
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
145854 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 145813  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 13262 - 13221
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
13262 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 13221  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 10887206 - 10887165
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
10887206 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 10887165  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 29863303 - 29863344
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
29863303 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 29863344  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 34692531 - 34692490
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
34692531 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 34692490  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 367
Target Start/End: Original strand, 8977467 - 8977505
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtt 367  Q
    ||||||||||||||||||||||||||  |||||||||||    
8977467 tttttctatcatgtgtaaatttgcacttgttaagaagtt 8977505  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 13391857 - 13391811
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| |||||||| || ||||||||||||||    
13391857 aagggtttttctatcatgtgcaaatttgcgcatgttaagaagtttaa 13391811  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 17552583 - 17552629
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||    
17552583 aagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaa 17552629  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 370
Target Start/End: Complemental strand, 20979146 - 20979108
Alignment:
332 ttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||| ||||||||||| ||||||||||||||    
20979146 ttctatcatgtgcaaatttgcacatgttaagaagtttaa 20979108  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 398
Target Start/End: Complemental strand, 26393335 - 26393305
Alignment:
368 taaggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||||    
26393335 taaggtcaaatgcatctaaaggtcctttaag 26393305  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 2830682 - 2830723
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||  ||||||||||| ||||||||||||||    
2830682 tttttctatcatgtacaaatttgcacatgttaagaagtttaa 2830723  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 3853120 - 3853079
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
3853120 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 3853079  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 6017033 - 6016992
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
6017033 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaa 6016992  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 12626872 - 12626843
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
12626872 aaggtcaaatgcatctaaaggtcctttaag 12626843  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 14228127 - 14228168
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
14228127 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 14228168  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 18332689 - 18332730
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
18332689 tttttctatcatgtgcaaattttcacatgttaagaagtttaa 18332730  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 24979150 - 24979191
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||    
24979150 tttttctatcatgtgcaaatttgcacatgttaagatgtttaa 24979191  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 27819628 - 27819669
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||  ||||||||||| ||||||||||||||    
27819628 tttttctatcatgtacaaatttgcacatgttaagaagtttaa 27819669  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 28943770 - 28943811
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
28943770 tttttctatcatgtgcaaatttgcacatgttaagaaatttaa 28943811  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 31069583 - 31069624
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
31069583 tttttctatcatgtgcaaatttacacatgttaagaagtttaa 31069624  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 31169764 - 31169805
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||||||||||||||| ||||| || |||||    
31169764 tttttctatcatgtgtaaatttgcacatgttaacaaatttaa 31169805  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 31568286 - 31568245
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
31568286 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaa 31568245  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 32614945 - 32614986
Alignment:
329 tttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    ||||||||||||||  ||||||||||| ||||||||||||||    
32614945 tttttctatcatgtacaaatttgcacatgttaagaagtttaa 32614986  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 2598006 - 2598034
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
2598006 aggtcaaatgcatctaaaggtcctttaag 2598034  T

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Target: scaffold0727 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 5873 - 5827
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||||||||| ||||||||||| ||||| ||||||||    
5873 aaggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaa 5827  T

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Target: scaffold0073 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 16531 - 16577
Alignment:
324 aaggttttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||| ||||||||| ||||||||||| ||||||||||||||    
16531 aagggtttttatatcatgtgcaaatttgcacatgttaagaagtttaa 16577  T

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Target: scaffold1986 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 322 - 293
Alignment:
369 aaggtcaaatgcatctaaaggtcctttaag 398  Q
    ||||||||||||||||||||||||||||||    
322 aaggtcaaatgcatctaaaggtcctttaag 293  T

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Target: scaffold0618 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 8416 - 8456
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||||||||||||||||||||||| | |||||||| |||||    
8416 ttttctatcatgtgtaaatttgcatatgttaagaaatttaa 8456  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 21074 - 21106
Alignment:
335 tatcatgtgtaaatttgcacacgttaagaagtt 367  Q
    ||||||||||||||||||||| |||||||||||    
21074 tatcatgtgtaaatttgcacatgttaagaagtt 21106  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 1445 - 1485
Alignment:
330 ttttctatcatgtgtaaatttgcacacgttaagaagtttaa 370  Q
    |||| ||||||||| ||||||||||| ||||||||||||||    
1445 ttttttatcatgtgcaaatttgcacatgttaagaagtttaa 1485  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 14495 - 14523
Alignment:
370 aggtcaaatgcatctaaaggtcctttaag 398  Q
    |||||||||||||||||||||||||||||    
14495 aggtcaaatgcatctaaaggtcctttaag 14523  T

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