View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1343_low_107 (Length: 357)

Name: NF1343_low_107
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1343_low_107
NF1343_low_107
[»] chr7 (28 HSPs)
chr7 (121-357)||(10500526-10500780)
chr7 (121-357)||(42374094-42374350)
chr7 (308-357)||(14156388-14156437)
chr7 (124-204)||(24269728-24269808)
chr7 (312-357)||(9945010-9945055)
chr7 (312-357)||(14317516-14317561)
chr7 (312-357)||(23461633-23461678)
chr7 (310-357)||(5294430-5294477)
chr7 (310-357)||(5295603-5295650)
chr7 (310-357)||(5296776-5296823)
chr7 (312-357)||(8941271-8941316)
chr7 (312-357)||(11392516-11392561)
chr7 (312-357)||(14269084-14269129)
chr7 (312-357)||(26355194-26355239)
chr7 (312-357)||(26357646-26357691)
chr7 (313-357)||(11973152-11973196)
chr7 (305-357)||(13893453-13893505)
chr7 (288-357)||(8135214-8135283)
chr7 (312-357)||(8469339-8469384)
chr7 (305-350)||(20488350-20488395)
chr7 (312-357)||(45846765-45846810)
chr7 (313-357)||(21188926-21188970)
chr7 (319-357)||(15081169-15081207)
chr7 (288-330)||(15095613-15095655)
chr7 (311-357)||(16214481-16214527)
chr7 (305-342)||(15624040-15624077)
chr7 (312-357)||(38897549-38897593)
chr7 (309-337)||(41285057-41285085)
[»] chr8 (33 HSPs)
chr8 (121-357)||(15202098-15202351)
chr8 (121-357)||(27471527-27471782)
chr8 (121-356)||(20457476-20457729)
chr8 (121-357)||(32122525-32122774)
chr8 (121-357)||(37609513-37609767)
chr8 (149-357)||(24049407-24049633)
chr8 (121-217)||(19936029-19936125)
chr8 (310-357)||(32810491-32810538)
chr8 (312-357)||(1326445-1326490)
chr8 (312-357)||(5852507-5852552)
chr8 (312-357)||(11361314-11361359)
chr8 (312-357)||(16412635-16412680)
chr8 (312-357)||(19897311-19897356)
chr8 (313-357)||(20404076-20404120)
chr8 (305-357)||(21330831-21330883)
chr8 (250-330)||(22317850-22317929)
chr8 (250-330)||(22474790-22474869)
chr8 (124-195)||(20397266-20397337)
chr8 (305-352)||(34951436-34951483)
chr8 (312-357)||(24485254-24485299)
chr8 (312-357)||(38549133-38549178)
chr8 (312-357)||(45289761-45289806)
chr8 (305-353)||(22005070-22005118)
chr8 (305-345)||(44522172-44522212)
chr8 (307-353)||(21999433-21999479)
chr8 (312-350)||(22002665-22002703)
chr8 (312-357)||(20457999-20458044)
chr8 (289-330)||(36405109-36405150)
chr8 (312-353)||(44474702-44474743)
chr8 (121-149)||(20985587-20985615)
chr8 (305-353)||(21966694-21966742)
chr8 (305-353)||(21979460-21979508)
chr8 (305-345)||(25733813-25733853)
[»] scaffold0574 (1 HSPs)
scaffold0574 (121-357)||(7248-7502)
[»] chr4 (28 HSPs)
chr4 (121-357)||(363170-363419)
chr4 (121-357)||(3515804-3516063)
chr4 (121-217)||(25031329-25031425)
chr4 (312-357)||(7640400-7640445)
chr4 (312-357)||(14745700-14745745)
chr4 (312-357)||(14970027-14970072)
chr4 (312-357)||(19617395-19617440)
chr4 (312-357)||(19858410-19858455)
chr4 (312-357)||(44616194-44616239)
chr4 (250-324)||(19565857-19565930)
chr4 (312-353)||(1836734-1836775)
chr4 (316-357)||(3485872-3485913)
chr4 (312-357)||(12778196-12778241)
chr4 (312-357)||(15354846-15354891)
chr4 (312-357)||(18214524-18214569)
chr4 (312-357)||(52872402-52872447)
chr4 (317-357)||(11773-11813)
chr4 (313-357)||(52313551-52313595)
chr4 (288-330)||(12623350-12623392)
chr4 (312-350)||(18238826-18238864)
chr4 (312-350)||(50221552-50221590)
chr4 (312-353)||(15489469-15489510)
chr4 (305-350)||(18023023-18023068)
chr4 (308-349)||(26014299-26014340)
chr4 (312-357)||(26790262-26790307)
chr4 (312-353)||(42596477-42596518)
chr4 (310-354)||(16043968-16044012)
chr4 (310-350)||(19243613-19243653)
[»] chr1 (24 HSPs)
chr1 (121-357)||(22050141-22050395)
chr1 (121-357)||(29299038-29299291)
chr1 (121-217)||(15859106-15859202)
chr1 (312-357)||(9044518-9044563)
chr1 (312-357)||(16274573-16274618)
chr1 (312-357)||(42314751-42314796)
chr1 (312-357)||(43543500-43543545)
chr1 (312-357)||(46560085-46560130)
chr1 (124-204)||(21169119-21169198)
chr1 (313-357)||(22122168-22122212)
chr1 (313-357)||(40129688-40129732)
chr1 (313-357)||(41230941-41230985)
chr1 (250-330)||(51324538-51324617)
chr1 (312-357)||(51083181-51083226)
chr1 (305-345)||(20030630-20030670)
chr1 (312-351)||(34770621-34770660)
chr1 (312-350)||(21841681-21841719)
chr1 (288-330)||(24723327-24723369)
chr1 (312-353)||(11946451-11946492)
chr1 (312-357)||(14237655-14237700)
chr1 (305-357)||(22350723-22350775)
chr1 (310-350)||(23592942-23592982)
chr1 (310-350)||(41373384-41373424)
chr1 (310-350)||(48444405-48444445)
[»] chr6 (36 HSPs)
chr6 (121-357)||(31629651-31629906)
chr6 (121-357)||(17200872-17201125)
chr6 (121-255)||(18915097-18915231)
chr6 (124-204)||(19235295-19235375)
chr6 (124-204)||(19167638-19167718)
chr6 (312-357)||(17882710-17882755)
chr6 (312-357)||(19005945-19005990)
chr6 (312-357)||(8055933-8055978)
chr6 (312-357)||(16198402-16198447)
chr6 (312-357)||(17027864-17027909)
chr6 (312-357)||(19003484-19003529)
chr6 (312-357)||(22783131-22783176)
chr6 (312-357)||(25536012-25536057)
chr6 (312-357)||(25689430-25689475)
chr6 (312-357)||(25721102-25721147)
chr6 (312-357)||(25753445-25753490)
chr6 (312-357)||(25755615-25755660)
chr6 (312-357)||(30676039-30676084)
chr6 (312-357)||(34963977-34964022)
chr6 (313-357)||(1599038-1599082)
chr6 (305-353)||(9621543-9621591)
chr6 (305-357)||(25739328-25739380)
chr6 (124-194)||(18585990-18586060)
chr6 (312-353)||(23993030-23993071)
chr6 (289-330)||(28948609-28948650)
chr6 (250-324)||(18982612-18982686)
chr6 (311-357)||(20183727-20183773)
chr6 (311-357)||(22152218-22152264)
chr6 (124-194)||(28948772-28948842)
chr6 (305-350)||(2077214-2077259)
chr6 (310-343)||(10986179-10986212)
chr6 (312-357)||(18914922-18914966)
chr6 (305-342)||(23501694-23501731)
chr6 (312-345)||(28709586-28709619)
chr6 (307-343)||(25469700-25469736)
chr6 (124-176)||(30673197-30673249)
[»] chr2 (28 HSPs)
chr2 (121-357)||(24918937-24919191)
chr2 (121-217)||(38968539-38968635)
chr2 (288-357)||(18388166-18388235)
chr2 (312-357)||(24528867-24528912)
chr2 (312-357)||(45027220-45027265)
chr2 (310-357)||(22106262-22106309)
chr2 (312-357)||(23706346-23706391)
chr2 (312-357)||(23932257-23932302)
chr2 (312-357)||(32214250-32214295)
chr2 (313-357)||(6726844-6726888)
chr2 (313-357)||(24368624-24368668)
chr2 (313-357)||(24671822-24671866)
chr2 (313-357)||(25616584-25616628)
chr2 (314-357)||(24897411-24897454)
chr2 (314-357)||(24899894-24899937)
chr2 (314-357)||(24902371-24902414)
chr2 (314-357)||(24904848-24904891)
chr2 (314-357)||(24907323-24907366)
chr2 (313-356)||(41523202-41523245)
chr2 (312-357)||(24682233-24682278)
chr2 (312-357)||(38968380-38968425)
chr2 (313-357)||(21154136-21154180)
chr2 (309-353)||(37380516-37380560)
chr2 (312-350)||(26506289-26506327)
chr2 (312-350)||(26508767-26508805)
chr2 (312-350)||(27919978-27920016)
chr2 (306-350)||(9785552-9785596)
chr2 (310-350)||(34401734-34401774)
[»] scaffold0001 (2 HSPs)
scaffold0001 (125-357)||(501861-502107)
scaffold0001 (305-345)||(152104-152144)
[»] chr5 (15 HSPs)
chr5 (121-357)||(295394-295648)
chr5 (121-357)||(18419458-18419710)
chr5 (121-255)||(21573769-21573904)
chr5 (248-303)||(21573703-21573758)
chr5 (312-357)||(24473871-24473916)
chr5 (312-357)||(2153952-2153997)
chr5 (312-357)||(17516290-17516335)
chr5 (312-357)||(20901326-20901371)
chr5 (312-357)||(29330770-29330815)
chr5 (313-357)||(20917168-20917212)
chr5 (313-357)||(32028822-32028866)
chr5 (312-350)||(263982-264020)
chr5 (312-350)||(38620346-38620384)
chr5 (301-330)||(20566580-20566609)
chr5 (312-353)||(31251892-31251933)
[»] scaffold0278 (1 HSPs)
scaffold0278 (121-357)||(8729-8981)
[»] chr3 (28 HSPs)
chr3 (121-255)||(12535475-12535609)
chr3 (121-215)||(53300623-53300717)
chr3 (121-217)||(22146557-22146653)
chr3 (121-199)||(28195577-28195655)
chr3 (313-357)||(8899620-8899664)
chr3 (313-357)||(16282079-16282123)
chr3 (313-357)||(38961158-38961202)
chr3 (124-194)||(9510733-9510803)
chr3 (124-194)||(9518708-9518778)
chr3 (311-357)||(12119184-12119230)
chr3 (312-357)||(10379936-10379981)
chr3 (312-357)||(20629512-20629557)
chr3 (312-357)||(24514280-24514325)
chr3 (312-357)||(46823058-46823103)
chr3 (312-357)||(55318624-55318669)
chr3 (313-357)||(13937295-13937339)
chr3 (305-357)||(16828274-16828326)
chr3 (313-357)||(17444084-17444128)
chr3 (313-357)||(41124736-41124780)
chr3 (313-357)||(13938301-13938345)
chr3 (305-343)||(13437259-13437297)
chr3 (312-350)||(55477402-55477440)
chr3 (312-345)||(5842893-5842926)
chr3 (312-357)||(11202228-11202273)
chr3 (305-350)||(14671795-14671840)
chr3 (312-357)||(26054435-26054480)
chr3 (312-345)||(45577655-45577688)
chr3 (310-350)||(1864365-1864405)
[»] scaffold0013 (1 HSPs)
scaffold0013 (121-215)||(31303-31397)
[»] scaffold0059 (2 HSPs)
scaffold0059 (124-204)||(49917-49997)
scaffold0059 (250-330)||(49763-49843)
[»] scaffold0100 (1 HSPs)
scaffold0100 (124-204)||(26420-26500)
[»] scaffold0007 (2 HSPs)
scaffold0007 (250-357)||(158761-158867)
scaffold0007 (250-327)||(16357-16434)
[»] scaffold0535 (1 HSPs)
scaffold0535 (312-357)||(7581-7626)
[»] scaffold0306 (1 HSPs)
scaffold0306 (312-357)||(10660-10705)
[»] scaffold0043 (1 HSPs)
scaffold0043 (312-357)||(10781-10826)
[»] scaffold0023 (1 HSPs)
scaffold0023 (312-357)||(16760-16805)
[»] scaffold0019 (1 HSPs)
scaffold0019 (312-357)||(21969-22014)
[»] scaffold0112 (1 HSPs)
scaffold0112 (124-204)||(3075-3155)
[»] scaffold0285 (2 HSPs)
scaffold0285 (124-199)||(19916-19991)
scaffold0285 (288-329)||(19788-19829)
[»] scaffold1792 (1 HSPs)
scaffold1792 (312-357)||(1155-1200)
[»] scaffold1296 (1 HSPs)
scaffold1296 (312-357)||(2051-2096)
[»] scaffold0747 (1 HSPs)
scaffold0747 (312-357)||(1505-1550)
[»] scaffold0711 (1 HSPs)
scaffold0711 (312-357)||(6897-6942)
[»] scaffold0322 (1 HSPs)
scaffold0322 (312-357)||(18734-18779)
[»] scaffold0317 (1 HSPs)
scaffold0317 (312-357)||(6257-6302)
[»] scaffold0297 (1 HSPs)
scaffold0297 (312-357)||(2918-2963)
[»] scaffold0230 (3 HSPs)
scaffold0230 (312-357)||(22700-22745)
scaffold0230 (124-194)||(6482-6552)
scaffold0230 (315-357)||(20527-20569)
[»] scaffold0191 (1 HSPs)
scaffold0191 (312-357)||(3617-3662)
[»] scaffold0149 (1 HSPs)
scaffold0149 (312-357)||(34293-34338)
[»] scaffold0040 (2 HSPs)
scaffold0040 (312-357)||(20641-20686)
scaffold0040 (310-350)||(13031-13071)
[»] scaffold0035 (2 HSPs)
scaffold0035 (312-357)||(107272-107317)
scaffold0035 (312-357)||(115773-115818)
[»] scaffold0323 (1 HSPs)
scaffold0323 (313-357)||(11871-11915)
[»] scaffold0108 (1 HSPs)
scaffold0108 (250-330)||(6452-6531)
[»] scaffold0042 (1 HSPs)
scaffold0042 (313-357)||(43169-43213)
[»] scaffold0016 (2 HSPs)
scaffold0016 (313-357)||(185066-185110)
scaffold0016 (307-353)||(172104-172150)
[»] scaffold0011 (1 HSPs)
scaffold0011 (250-330)||(33488-33567)
[»] scaffold0716 (1 HSPs)
scaffold0716 (312-357)||(5491-5536)
[»] scaffold0494 (1 HSPs)
scaffold0494 (312-357)||(36-81)
[»] scaffold0319 (1 HSPs)
scaffold0319 (312-357)||(6118-6163)
[»] scaffold0151 (1 HSPs)
scaffold0151 (312-357)||(36599-36644)
[»] scaffold0109 (2 HSPs)
scaffold0109 (312-357)||(19-64)
scaffold0109 (316-357)||(5326-5367)
[»] scaffold0053 (1 HSPs)
scaffold0053 (313-354)||(60736-60777)
[»] scaffold0031 (1 HSPs)
scaffold0031 (312-357)||(56220-56265)
[»] scaffold0028 (6 HSPs)
scaffold0028 (312-357)||(135116-135161)
scaffold0028 (312-357)||(137585-137630)
scaffold0028 (312-357)||(140054-140099)
scaffold0028 (312-357)||(142523-142568)
scaffold0028 (312-357)||(144992-145037)
scaffold0028 (258-342)||(2998-3082)
[»] scaffold0021 (1 HSPs)
scaffold0021 (312-357)||(623-668)
[»] scaffold0457 (1 HSPs)
scaffold0457 (305-353)||(10891-10939)
[»] scaffold0301 (2 HSPs)
scaffold0301 (305-353)||(11315-11363)
scaffold0301 (305-353)||(15715-15763)
[»] scaffold0695 (1 HSPs)
scaffold0695 (312-350)||(6855-6893)
[»] scaffold0454 (1 HSPs)
scaffold0454 (312-350)||(493-531)
[»] scaffold0439 (1 HSPs)
scaffold0439 (311-357)||(12401-12447)
[»] scaffold0422 (1 HSPs)
scaffold0422 (309-343)||(3981-4015)
[»] scaffold0363 (1 HSPs)
scaffold0363 (312-350)||(10156-10194)
[»] scaffold0122 (1 HSPs)
scaffold0122 (312-350)||(33837-33875)
[»] scaffold1128 (1 HSPs)
scaffold1128 (312-353)||(508-549)
[»] scaffold0679 (1 HSPs)
scaffold0679 (312-345)||(1584-1617)
[»] scaffold0546 (1 HSPs)
scaffold0546 (316-357)||(7940-7981)
[»] scaffold0078 (1 HSPs)
scaffold0078 (310-339)||(11420-11449)
[»] scaffold0254 (1 HSPs)
scaffold0254 (310-350)||(21661-21701)
[»] scaffold0115 (1 HSPs)
scaffold0115 (124-176)||(17316-17368)
[»] scaffold0029 (1 HSPs)
scaffold0029 (310-350)||(12200-12240)
[»] scaffold0015 (1 HSPs)
scaffold0015 (305-353)||(209871-209919)


Alignment Details
Target: chr7 (Bit Score: 180; Significance: 4e-97; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 10500526 - 10500780
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10500526 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 10500625  T
Q  221 gaaattaggttagaatagtttttaagtgaaaac------------------aaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||||||||                  |||||||||||||||||||||||||||||||| |||||||||||| |||    
T  10500626 gaaattaggttagaatagtttttacgtgaaaacaatgatgtgggagaaaataaagagaagagaagagtcagagaatgagaagtctgtagaaccttgttgt 10500725  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10500726 caatcaatctaaggtaagggtgggactatcattcaataatcttgagtctatgatt 10500780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 42374094 - 42374350
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatat--aaaagag 218  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| ||    
T  42374094 aataatataataagtagacttggggagatgaattagaaattaaagaagtttagtaggcttaagtagaattaagagaagtggttagtgatataaaaaaaag 42374193  T
Q  219 gagaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgct 300  Q
    |||||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  42374194 gagaaattaggttagaatagtttttacgtgataacaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttact 42374293  T
Q  301 gtcaatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||||||| ||||| ||||||||  |||| || ||||||||    
T  42374294 gtcaatcaatctaaggtaagggtgggactaacattcaatcttcttaagcctatgatt 42374350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 14156388 - 14156437
Alignment:
Q  308 aatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14156388 aatctaaggtaagggtgggactatcattcaataatcttgagtctatgatt 14156437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 24269728 - 24269808
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggtta 204  Q
    |||||||||| |||||||| |||||||||||| || ||| | |||||||||||  ||||||||||||||||||| ||||||    
T  24269728 aatagaataattagacttgaggggctgaattataatttagaaaagtttagtggaattaagtagaattaagagaattggtta 24269808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 9945010 - 9945055
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  9945010 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 9945055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 14317516 - 14317561
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  14317516 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 14317561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 23461633 - 23461678
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  23461633 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 23461678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 5294430 - 5294477
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5294430 tctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 5294477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 5295603 - 5295650
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5295603 tctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 5295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 5296776 - 5296823
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5296776 tctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 5296823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 8941316 - 8941271
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8941316 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 8941271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 11392516 - 11392561
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  11392516 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 11392561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 14269084 - 14269129
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  14269084 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 14269129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 26355194 - 26355239
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  26355194 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 26355239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 26357646 - 26357691
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  26357646 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 26357691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 11973196 - 11973152
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  11973196 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 11973152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 13893505 - 13893453
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||||||    
T  13893505 atcaatctaaggtaagggtgggactatcattcagtgatcttaagtctatgatt 13893453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 8135214 - 8135283
Alignment:
Q  288 gtagaaccttgctgtcaatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||   ||||||||||||||||||||||||||||| | |||| ||||| | ||| |||||||    
T  8135214 gtagaaccttgtgatcaatcaatctaaggtaagggtgagactaaccttcactaatcctaagtgtatgatt 8135283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 8469384 - 8469339
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  8469384 taaggtaagggtgggactaacattcaataattttgagtctatgatt 8469339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 350
Target Start/End: Complemental strand, 20488395 - 20488350
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||    
T  20488395 atcaatccaaggtaagggtgagactaacattcaataatcttaagtc 20488350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 45846765 - 45846810
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  45846765 taaggtaagggtgggactaacattcaataatcttgagtctctgatt 45846810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 21188926 - 21188970
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||    
T  21188926 aaggtaagggtgggactaacatttaataatcttgagtctatgatt 21188970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 15081169 - 15081207
Alignment:
Q  319 agggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  15081169 agggtgggactaacattcaataatcttgagtctatgatt 15081207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 15095613 - 15095655
Alignment:
Q  288 gtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    ||||||||||||  ||||||||||||||||||||||| |||||    
T  15095613 gtagaaccttgcgatcaatcaatctaaggtaagggtgggacta 15095655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 16214527 - 16214481
Alignment:
Q  311 ctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||| || ||  |||||||||||||||||||||||||    
T  16214527 ctaaggtaagggtgggattaatattcaataatcttgagtctatgatt 16214481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 15624077 - 15624040
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataat 342  Q
    |||||||||||||||||||||||||| | |||||||||    
T  15624077 atcaatctaaggtaagggtgagactaaccttcaataat 15624040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 38897549 - 38897593
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||    
T  38897549 taaggtaggggtgagactaacatt-aataatcttgagtctatgatt 38897593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 337
Target Start/End: Complemental strand, 41285085 - 41285057
Alignment:
Q  309 atctaaggtaagggtgagactatcattca 337  Q
    |||||||||||||||||||||||||||||    
T  41285085 atctaaggtaagggtgagactatcattca 41285057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 178; Significance: 6e-96; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 15202098 - 15202351
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15202098 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 15202197  T
Q  221 gaaattaggttagaatagttttta-----------------agtgaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtc 303  Q
    ||||||||||||||||||||||||                  | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15202198 gaaattaggttagaatagtttttacatgaaaaaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttgctgtc 15202297  T
Q  304 aatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15202298 aattaatctaaggtaagggtgagactaacattcaataatcttgagtctatgatt 15202351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 27471527 - 27471782
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471527 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 27471626  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27471627 gaaattaggttagaatagtttttatgtgaaaacaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttgctgt 27471726  T
Q  303 caatc-aatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  27471727 caatcaaatctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 27471782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 121 - 356
Target Start/End: Complemental strand, 20457729 - 20457476
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20457729 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagttggcttaagtagaattaagagaagtggttagtgatataaaagagga 20457630  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  20457629 gaaattaggttagaatagtttttacgtgaaaacaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaactttgctgt 20457530  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgat 356  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  20457529 caatcaatctaaggtaagggtgggactaacattcaataatcttgagtctatgat 20457476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 32122774 - 32122525
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32122774 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtataattaagagaagtggttagtgatataaaagagga 32122675  T
Q  221 gaaattaggttagaatagtttttaagtgaaaacaaaga-------------gaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatc 307  Q
    ||||||||||||||||||||||||  ||||||||| ||              |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32122674 gaaattaggttagaatagtttttacatgaaaacaaggatttgggagaaaacaaagagaagagtcagagaatgagaagtctgtagaaccttgctgtcaatc 32122575  T
Q  308 aatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  32122574 aatctaaggtaagggtggaactaacattcaataatcttgagtctatgatt 32122525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 37609513 - 37609767
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  37609513 aataatagaataagtagacttggggggctgaattagaaattaaagaagttttgtgggcttaagtagaattaagagaagtggttagtaatataaaagagaa 37609612  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  37609613 gaaattaggttagaatagtttttacgtgaatacaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtttgtagaaccttgttgt 37609712  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37609713 caatcaatctaaggtaagggtgagactaacattcaataatcttgagtctatgatt 37609767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 149 - 357
Target Start/End: Complemental strand, 24049633 - 24049407
Alignment:
Q  149 tgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagaggagaaattaggttagaatagtttttaagt- 247  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  24049633 tgaattagaaattaaagaagtttagcgggcttaagtagaattaagagaagtggttagtgatataaaagaggagaaattaggttagaatagtttttacgtg 24049534  T
Q  248 -----------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
                     ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  24049533 aaaaaaagtatttgggagaaaacaaagagaagagaagagtcagagaattagaagtctgtagaaccttgctgtcaatcaatctaaggtaagggtgggacta 24049434  T
Q  331 tcattcaataatcttgagtctatgatt 357  Q
     ||||||||||||||||||||||||||    
T  24049433 acattcaataatcttgagtctatgatt 24049407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 19936029 - 19936125
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaaga 217  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19936029 aataatagaataagtagacttggggggcagaattagaaattaaagaagtttagtgggcttaagtagaattaagaaaagtggttagtgatataaaaga 19936125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 32810538 - 32810491
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  32810538 tctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 32810491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 1326445 - 1326490
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1326445 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 1326490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 5852507 - 5852552
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5852507 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 5852552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 11361359 - 11361314
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  11361359 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 11361314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 16412635 - 16412680
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  16412635 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 16412680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 19897356 - 19897311
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  19897356 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 19897311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 20404120 - 20404076
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  20404120 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 20404076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 21330883 - 21330831
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||||||    
T  21330883 atcaatctaaggtaagggtgggactatcattcagtgatcttaagtctatgatt 21330831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 22317850 - 22317929
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||| ||||||||||||||||||||| | |||||    ||||||||||||  ||||||||||||||||||||||| |||||    
T  22317850 aaaccaagagaagagaagagtcagagga-gagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtgggacta 22317929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 22474869 - 22474790
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||| |||||||||||||||||| |||| |||||    ||||||||||||  ||||||||||||||||||||||| |||||    
T  22474869 aaaccaagagaagagaagagtcaaagaa-gagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtgggacta 22474790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 20397266 - 20397337
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagag 195  Q
    |||||||||| |||||||| |||| |||||||||| ||| || ||||||||||  |||||||||||| ||||    
T  20397266 aatagaataattagacttgaggggatgaattagaatttagaggagtttagtggaattaagtagaatttagag 20397337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 34951483 - 34951436
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtcta 352  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  34951483 atcaatctaaggtaagggtgagactatcattcagtgatcttaagtcta 34951436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 24485254 - 24485299
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||    
T  24485254 taaggtaagggtgggactaacatttaataatcttgagtctatgatt 24485299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 38549133 - 38549178
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||    
T  38549133 taaggtaagggttggactaacattcaataatcttgagtctatgatt 38549178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 45289761 - 45289806
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||    
T  45289761 taaggtaagggtgggactaacattcaataatcttaagtctatgatt 45289806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 22005070 - 22005118
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||    
T  22005070 atcaatctaaggtaagggtgggactatcattcagtgatcttcagtctat 22005118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 44522172 - 44522212
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatctt 345  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  44522172 atcaatctaaggtaagggtgggactatcattcagtaatctt 44522212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 21999433 - 21999479
Alignment:
Q  307 caatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||| |||||||||||| | ||||| |||||||    
T  21999433 caatctaaggtaagggtgggactatcattcagtgatcttaagtctat 21999479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 22002703 - 22002665
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  22002703 taaggtaagggtgagactaacattcaataatcttaagtc 22002665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 20458044 - 20457999
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| | ||||||||| |||||| |||||||    
T  20458044 taaggtaagggtgagactaaccttcaataattttgagtatatgatt 20457999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 36405109 - 36405150
Alignment:
Q  289 tagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||||||||||  ||||||||||||||||||||||| |||||    
T  36405109 tagaaccttgcgatcaatcaatctaaggtaagggtgtgacta 36405150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 44474702 - 44474743
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  44474702 taaggtaagggtgagactatcattcagtgatcttaagtctat 44474743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 20985587 - 20985615
Alignment:
Q  121 aataatagaataagtagacttggggggct 149  Q
    |||||||||||||||||||||||||||||    
T  20985587 aataatagaataagtagacttggggggct 20985615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 21966694 - 21966742
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||| ||||||||||||| |||||||||||| | ||||| |||||||    
T  21966694 atcaatgtaaggtaagggtgggactatcattcagtgatcttaagtctat 21966742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 21979460 - 21979508
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    ||||||||||||||| |||| |||||||||||| | ||||| |||||||    
T  21979460 atcaatctaaggtaaaggtgggactatcattcagtgatcttaagtctat 21979508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 25733813 - 25733853
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatctt 345  Q
    ||||||| |||||||||||| ||||| ||||||||||||||    
T  25733813 atcaatccaaggtaagggtgggactaacattcaataatctt 25733853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 176; Significance: 9e-95; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 7502 - 7248
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7502 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 7403  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7402 gaaattaggttagaatagtttttacgtaaaaacaaggatttgggagaaaacaaagagaagagaagagtcagagaacgagaagtttgtagaaccttgctgt 7303  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  7302 caatcaatctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 7248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 4e-94; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 363419 - 363170
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  363419 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 363320  T
Q  221 gaaattaggttagaatagtttttaagt---------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaa 305  Q
    |||||||||||||||||||||||| ||               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  363319 gaaattaggttagaatagtttttacgtgaaaaccatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttgctgtcaa 363220  T
Q  306 tcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||  ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  363219 tc--tctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 363170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 3516063 - 3515804
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3516063 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 3515964  T
Q  221 gaaattaggttagaatagtttttaagtgaaaaca------------------aagagaagag-----aagagtcagagaatgagaagtatgtagaacctt 297  Q
    |||||||||||||||||||||||| |||||||||                  ||||||||||     ||||||||||||||||||||| |||||||||||    
T  3515963 gaaattaggttagaatagtttttacgtgaaaacaaagatttgggagaaaacaaagagaagagaagagaagagtcagagaatgagaagtctgtagaacctt 3515864  T
Q  298 gctgtcaatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3515863 gttgtcaatcaatctaaggtaagggtgagactaacattcaataatcttgagtctatgatt 3515804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 25031425 - 25031329
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaaga 217  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25031425 aataatagaataagtagacttgtagggctgatttagaaattaaagaagtttagtgggcttaagtagaattaagaaaagtggttagtgatataaaaga 25031329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 7640400 - 7640445
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  7640400 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 7640445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 14745700 - 14745745
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  14745700 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 14745745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 14970027 - 14970072
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||    
T  14970027 taaggtaagggtgagactaacattcaataatcttgagtctgtgatt 14970072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 19617395 - 19617440
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  19617395 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 19617440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 19858455 - 19858410
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  19858455 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 19858410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 44616239 - 44616194
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  44616239 taaggtaagggtgagactaacattcaataatcttgggtctatgatt 44616194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 19565857 - 19565930
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtg 324  Q
    |||| |||||||||||||||| |||||| |||||    ||||||||||||  |||||||||||||||||||||||    
T  19565857 aaaccaagagaagagaagagtaagagaa-gagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtg 19565930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 1836734 - 1836775
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  1836734 taaggtaagggtgggactaacattcaataatcttgagtctat 1836775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 3485913 - 3485872
Alignment:
Q  316 gtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  3485913 gtaagggtgagactaacattcaataatcttaagtctatgatt 3485872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 12778196 - 12778241
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  12778196 taaggcaagggtgggactaacattcaataatcttgagtctatgatt 12778241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 15354846 - 15354891
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||  |||| ||||||||||||||||||||||||||    
T  15354846 taaggtaagggtggaactaacattcaataatcttgagtctatgatt 15354891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 18214524 - 18214569
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  18214524 taaggtaagcgtgggactaacattcaataatcttgagtctatgatt 18214569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 52872402 - 52872447
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| || || ||||||||||||||||||||||||||    
T  52872402 taaggtaagggtgggattaacattcaataatcttgagtctatgatt 52872447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 11773 - 11813
Alignment:
Q  317 taagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  11773 taagggtgggactaacattcaataatcttgagtctatgatt 11813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 52313595 - 52313551
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||    
T  52313595 aaggtaagggtgggactaacattcaataatcttaagtctatgatt 52313551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 12623392 - 12623350
Alignment:
Q  288 gtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    ||||||||||||  ||||||||||||||||||||||| |||||    
T  12623392 gtagaaccttgcgatcaatcaatctaaggtaagggtgggacta 12623350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 18238826 - 18238864
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  18238826 taaggtaagggtgagactaacattcaataatcttaagtc 18238864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 50221552 - 50221590
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  50221552 taaggtaagggtgagactaacattcaataatcttaagtc 50221590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 15489469 - 15489510
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    ||||||||||||| || || ||||||||||||||||||||||    
T  15489469 taaggtaagggtgggaataacattcaataatcttgagtctat 15489510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 350
Target Start/End: Complemental strand, 18023068 - 18023023
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  18023068 atcaatccaaggtaagggtgggactaacattcaataatcttaagtc 18023023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 26014340 - 26014299
Alignment:
Q  308 aatctaaggtaagggtgagactatcattcaataatcttgagt 349  Q
    ||||||||||||||||| ||||| | ||||||||||||||||    
T  26014340 aatctaaggtaagggtgggactaaccttcaataatcttgagt 26014299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 26790307 - 26790262
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||||    
T  26790307 taaggtaagggtgagactaacattcaattttcttaagtctatgatt 26790262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 42596477 - 42596518
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  42596477 taaggtaagggtgagactatcattcagtgatcttaagtctat 42596518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 16044012 - 16043968
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtctatg 354  Q
    ||||||||||||||||||||| ||| || ||||||| ||||||||    
T  16044012 tctaaggtaagggtgagactaacatgcagtaatcttaagtctatg 16043968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 19243653 - 19243613
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  19243653 tctaaggtaagggtgggactaacattcaataatcttaagtc 19243613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 22050141 - 22050395
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22050141 aataatagaataagtagacttggggggatgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 22050240  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22050241 gaaattaggttagaatagtttttacgtaaaaacaaggatttgggagaaaacaaagagaagagaagggtcagagaatgagaagtctgtagaaccttgctgt 22050340  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  22050341 caatcaatctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 22050395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 29299291 - 29299038
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29299291 aataatagaataagtagacttggggg-ctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 29299193  T
Q  221 gaaattaggttagaatagtttttaagtgaaaac------------------aaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    ||||||| ||||||||| |||||| ||||||||                  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29299192 gaaattatgttagaataatttttacgtgaaaacaaggatttcggagaaaataaagagaagagaagagtcagagaatgagaagtctgtagaaccttgctgt 29299093  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  29299092 caatcaatctaaggtaagggtgggactaacattcaataatcttgaatctatgatt 29299038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 15859106 - 15859202
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaaga 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15859106 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagaaaagtggttagtgatataaaaga 15859202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 9044518 - 9044563
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  9044518 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 9044563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 16274573 - 16274618
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  16274573 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 16274618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 42314751 - 42314796
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  42314751 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 42314796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 43543545 - 43543500
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  43543545 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 43543500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 46560130 - 46560085
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  46560130 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 46560085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 21169198 - 21169119
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggtta 204  Q
    |||||||||| |||||||| ||| ||||||||||| ||| || || |||||||  ||||||||||||||||||| ||||||    
T  21169198 aatagaataattagacttgaggg-ctgaattagaatttagaggagattagtggaattaagtagaattaagagaattggtta 21169119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 22122168 - 22122212
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  22122168 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 22122212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 40129732 - 40129688
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  40129732 aaggtaagggtgagactaacattcaataattttgagtctatgatt 40129688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 41230941 - 41230985
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  41230941 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 41230985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 51324617 - 51324538
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||| ||||||||||||||  ||||||| |||||    ||||||||||||  |||||||||||||||||||||||||||||    
T  51324617 aaaccaagagaagagaagaaccagagaa-gagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtgagacta 51324538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 51083226 - 51083181
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||    
T  51083226 taaggtaagggtgggactaacattcaataatcttaagtctatgatt 51083181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 20030630 - 20030670
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatctt 345  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  20030630 atcaatctaaggtaagggtgggactatcattcagtaatctt 20030670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 351
Target Start/End: Complemental strand, 34770660 - 34770621
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtct 351  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  34770660 taaggtaagggtgggactaacattcaataatcttgagtct 34770621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 21841719 - 21841681
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  21841719 taaggtaagggtgagactaacattcaataatcttaagtc 21841681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 24723327 - 24723369
Alignment:
Q  288 gtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    ||||||||||||  ||||||||||||||||||||||| |||||    
T  24723327 gtagaaccttgcgatcaatcaatctaaggtaagggtgggacta 24723369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 11946492 - 11946451
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  11946492 taaggtaagggtgagactatcattcagtgatcttaagtctat 11946451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 14237655 - 14237700
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||||    
T  14237655 taaggtaagggtgggactaatattcaataatcttaagtctatgatt 14237700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 22350775 - 22350723
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||| ||||| | |||||||||  ||||| |||||||    
T  22350775 atcaatctaaggtaagggtgggactaaccttcaataattctgagtatatgatt 22350723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 23592942 - 23592982
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  23592942 tctaaggtaagggtgggactaacattcaataatcttaagtc 23592982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 41373424 - 41373384
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  41373424 tctaaggtaagggtgggactaacattcaataatcttaagtc 41373384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 48444445 - 48444405
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  48444445 tctaaggtaagggtgggactaacattcaataatcttaagtc 48444405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 31629651 - 31629906
Alignment:
Q  121 aataatagaataagtagacttgggg-ggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagg 219  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31629651 aataatagaataagtagacttgggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagaga 31629750  T
Q  220 agaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctg 301  Q
    ||||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  31629751 agaaattaggttagaatagtttttacgtgaaaacaaagatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttgatg 31629850  T
Q  302 tcaatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31629851 tcaatcaatctaaggtaagggtgagactaacattcaataatcttgagtctatgatt 31629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 17200872 - 17201125
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  17200872 aataatagaataagtagacttggggggatgaattagaaattaaagaagtttagtaggcttaagtagaattaagagaagtggttagtgatataaaa-agga 17200970  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  17200971 gaaattaggttagaatagtttttacgtgataacaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttactgt 17201070  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||||| ||||| ||||||||  |||| || ||||||||    
T  17201071 caatcaatctaaggtaagggtgggactaacattcaatcttcttaagcctatgatt 17201125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 18915231 - 18915097
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18915231 aataaaagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtgattagtgatataaaagagga 18915132  T
Q  221 gaaattaggttagaatagtttttaagtgaaaacaa 255  Q
    |||||||||||||||||||||||| ||||||||||    
T  18915131 gaaattaggttagaatagtttttacgtgaaaacaa 18915097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 19235375 - 19235295
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggtta 204  Q
    |||||||||| |||||||| ||||||||||||||| ||| || ||||||||||  ||||||||||||||||||| ||||||    
T  19235375 aatagaataattagacttgaggggctgaattagaatttagaggagtttagtggaattaagtagaattaagagaaatggtta 19235295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 19167638 - 19167718
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggtta 204  Q
    |||||||||| ||| |||| ||||||||||||||| ||| || ||||||||||  ||||||||||||||||||| ||||||    
T  19167638 aatagaataattaggcttgaggggctgaattagaatttagaggagtttagtggaattaagtagaattaagagaattggtta 19167718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 17882710 - 17882755
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  17882710 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 17882755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 19005990 - 19005945
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  19005990 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 19005945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 8055978 - 8055933
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8055978 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 8055933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 16198447 - 16198402
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  16198447 taaggtaagggtgtgactaacattcaataatcttgagtctatgatt 16198402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 17027864 - 17027909
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17027864 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 17027909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 19003529 - 19003484
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  19003529 taaggtaagggtgaaactaacattcaataatcttgagtctatgatt 19003484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 22783176 - 22783131
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  22783176 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 22783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 25536057 - 25536012
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25536057 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 25536012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 25689475 - 25689430
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25689475 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 25689430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 25721147 - 25721102
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25721147 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 25721102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 25753490 - 25753445
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25753490 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 25753445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 25755660 - 25755615
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25755660 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 25755615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 30676039 - 30676084
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  30676039 taaggtaagggtgagactaacatgcaataatcttgagtctatgatt 30676084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 34964022 - 34963977
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  34964022 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 34963977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 1599082 - 1599038
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  1599082 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 1599038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 9621543 - 9621591
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  9621543 atcaatctaaggtaagggtgagactatcattcagtgatcttaagtctat 9621591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 25739380 - 25739328
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||||||    
T  25739380 atcaatctaaggtaagggtgggactatcattcagtgatcttaagtctatgatt 25739328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 18586060 - 18585990
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaaga 194  Q
    |||||||||| |||||||| ||||||||||||||| ||| || |||||||||   ||||||||||| ||||    
T  18586060 aatagaataattagacttgaggggctgaattagaatttagaggagtttagtgaaattaagtagaataaaga 18585990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 23993071 - 23993030
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  23993071 taaggtaagggtgggactaacattcaataatcttgagtctat 23993030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 28948650 - 28948609
Alignment:
Q  289 tagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  28948650 tagaaccttgcgatcaatcaatctaaggtaagggtgagacta 28948609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 18982686 - 18982612
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgag-aagtatgtagaaccttgctgtcaatcaatctaaggtaagggtg 324  Q
    |||| ||||||||||||||||||||||| ||| |||  ||||||||||||   |||||||||||||||||| ||||    
T  18982686 aaaccaagagaagagaagagtcagagaa-gagaaagcttgtagaaccttgtaatcaatcaatctaaggtaacggtg 18982612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 20183773 - 20183727
Alignment:
Q  311 ctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||| |||||||||||| || |||| |||||||||||    
T  20183773 ctaaggtaagggtgggactatcattcagtactcttaagtctatgatt 20183727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 22152218 - 22152264
Alignment:
Q  311 ctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||| |||||||||||| || |||| |||||||||||    
T  22152218 ctaaggtaagggtgggactatcattcagtactcttaagtctatgatt 22152264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 28948842 - 28948772
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaaga 194  Q
    |||||||||| |||||||| ||||||||||||||| ||  || |||||||||   ||||||||||| ||||    
T  28948842 aatagaataattagacttgaggggctgaattagaattttgaggagtttagtgaaattaagtagaataaaga 28948772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 350
Target Start/End: Complemental strand, 2077259 - 2077214
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  2077259 atcaatccaaggtaagggtgggactaacattcaataatcttaagtc 2077214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 343
Target Start/End: Original strand, 10986179 - 10986212
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatc 343  Q
    ||||||||||||||||||||||| ||||||||||    
T  10986179 tctaaggtaagggtgagactatctttcaataatc 10986212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 18914966 - 18914922
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||    
T  18914966 taaggtaagggtgggactaacattcaataatcttga-tctatgatt 18914922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 23501731 - 23501694
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataat 342  Q
    |||||||||||||||||||||||||| | |||||||||    
T  23501731 atcaatctaaggtaagggtgagactaaccttcaataat 23501694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 28709619 - 28709586
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatctt 345  Q
    |||||||||||||||||||||||||||| |||||    
T  28709619 taaggtaagggtgagactatcattcaatgatctt 28709586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 25469700 - 25469736
Alignment:
Q  307 caatctaaggtaagggtgagactatcattcaataatc 343  Q
    ||||||||||||||||||||||||||  |||||||||    
T  25469700 caatctaaggtaagggtgagactatctctcaataatc 25469736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 30673197 - 30673249
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgg 176  Q
    |||||||||| |||||||| ||||||||||||||  ||| || ||||||||||    
T  30673197 aatagaataattagacttgaggggctgaattagagtttagaggagtttagtgg 30673249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 24919191 - 24918937
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  24919191 aataatagaataagtagacttggggggctgaattaaaaattaaagaagtttagtgggctcaagtagaattaagagaagtggtta-tgatataaaagagga 24919093  T
Q  221 gaaattaggttagaatagttttta-------------------agtgaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctg 301  Q
    ||||||||||||||||||||||||                   || |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24919092 gaaattaggttagaatagtttttacgtgaaaaacaaggatttgagagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttgctg 24918993  T
Q  302 tcaatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  24918992 tcaatcaatctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 24918937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 38968635 - 38968539
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaaga 217  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  38968635 aataatagaataattagacttgtagggctgatttagaaattaaaaaagtttagtgggcttaagtagaattaagaaaagtggatagtgatataaaaga 38968539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 18388166 - 18388235
Alignment:
Q  288 gtagaaccttgctgtcaatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||  ||||||||||||||||||||||||||||| | |||||||||| ||||| |||||||    
T  18388166 gtagaaccttgcgatcaatcaatctaaggtaagggtgagactaaccttcaataatcctgagtatatgatt 18388235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 24528867 - 24528912
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  24528867 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 24528912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 45027220 - 45027265
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  45027220 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 45027265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 22106309 - 22106262
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  22106309 tctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 22106262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 23706346 - 23706391
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  23706346 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 23706391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 23932302 - 23932257
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  23932302 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 23932257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 32214250 - 32214295
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  32214250 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 32214295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 6726888 - 6726844
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  6726888 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 6726844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 24368668 - 24368624
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  24368668 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 24368624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 24671866 - 24671822
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  24671866 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 24671822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 25616628 - 25616584
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  25616628 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 25616584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 24897411 - 24897454
Alignment:
Q  314 aggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  24897411 aggtaagggtgggactaacattcaataatcttgagtctatgatt 24897454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 24899894 - 24899937
Alignment:
Q  314 aggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  24899894 aggtaagggtgggactaacattcaataatcttgagtctatgatt 24899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 24902371 - 24902414
Alignment:
Q  314 aggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  24902371 aggtaagggtgggactaacattcaataatcttgagtctatgatt 24902414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 24904848 - 24904891
Alignment:
Q  314 aggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  24904848 aggtaagggtgggactaacattcaataatcttgagtctatgatt 24904891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 24907323 - 24907366
Alignment:
Q  314 aggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  24907323 aggtaagggtgggactaacattcaataatcttgagtctatgatt 24907366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 41523202 - 41523245
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgat 356  Q
    |||||||||||||| ||| |||||||||||||||||||||||||    
T  41523202 aaggtaagggtgaggctaacattcaataatcttgagtctatgat 41523245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 24682278 - 24682233
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||    
T  24682278 taaggtaagggtgggactaacattcaataatcttaagtctatgatt 24682233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 38968425 - 38968380
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||    
T  38968425 taaggtaagggtgggactaacattcaataatcttaagtctatgatt 38968380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 21154136 - 21154180
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||    
T  21154136 aaggtaagagtgggactaacattcaataatcttgagtctatgatt 21154180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 37380560 - 37380516
Alignment:
Q  309 atctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    ||||||||||||||||||||||||||||| | ||||| |||||||    
T  37380560 atctaaggtaagggtgagactatcattcagtgatcttaagtctat 37380516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 26506327 - 26506289
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  26506327 taaggtaagggtgagactaacattcaataatcttaagtc 26506289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 26508805 - 26508767
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  26508805 taaggtaagggtgagactaacattcaataatcttaagtc 26508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 27919978 - 27920016
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  27919978 taaggtaagggtgagactaacattcaataatcttaagtc 27920016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 9785596 - 9785552
Alignment:
Q  306 tcaatctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    |||||| |||||||||||| ||||| |||||||||||||| ||||    
T  9785596 tcaatccaaggtaagggtgggactaacattcaataatcttaagtc 9785552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 34401734 - 34401774
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  34401734 tctaaggtaagggtgggactaacattcaataatcttaagtc 34401774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 125 - 357
Target Start/End: Complemental strand, 502107 - 501861
Alignment:
Q  125 atagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagaggagaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  502107 atagaataagtagacttggggggctgaattagaaattaaagaagtttagtgttcttaagtagaattaagagaagtggttagtgatataaaagaggagaaa 502008  T
Q  225 ttaggttagaatagt-ttttaagtgaaaacaaaga-------------gaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaat 310  Q
    ||||||||||||||| ||||| |||||||||| ||              |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  502007 ttaggttagaatagttttttacgtgaaaacaaggatttgggagaaaacaaagagaagagtcagagaatgagaagtctgtagaaccttgctgtcaatcaat 501908  T
Q  311 ctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||    
T  501907 ctaaggtaagtgtggtactaacattcaataatcttgagtctatgatt 501861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 152104 - 152144
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatctt 345  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  152104 atcaatctaaggtaagggtgggactatcattcagtaatctt 152144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 2e-80; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 295394 - 295648
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  295394 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggattaagtagaattaagagaagtggttaatgatataaaagagga 295493  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| | || ||| ||| |||    
T  295494 gaaattaggttagaatagtttttacgtgaaaacaatgatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctctacaactttgttgt 295593  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  295594 caatcaatctaaggtaagagtgagactaacattcaataatctttagtctatgatt 295648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 18419710 - 18419458
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18419710 aataatagaataagtagacttggggga-tgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaa-agga 18419613  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
    |||||||||||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  18419612 gaaattaggttagaatagtttttacgtgataacaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttactgt 18419513  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||| |||| ||||| ||||||||  |||| || ||||||||    
T  18419512 caatcaatctaaggtaaaggtgggactaacattcaatcttcttaagcctatgatt 18419458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 21573904 - 21573769
Alignment:
Q  121 aataatagaataagtagacttgggggg-ctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagg 219  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21573904 aataatagaataagtagacttgggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagg 21573805  T
Q  220 agaaattaggttagaatagtttttaagtgaaaacaa 255  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21573804 agaaattaggttagaatagtttttacgtgaaaacaa 21573769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 21573758 - 21573703
Alignment:
Q  248 gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtc 303  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  21573758 gaaaacaaagagaagagaagagtcagagaatgaaaagtctgtagaaccttgctgtc 21573703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 24473916 - 24473871
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  24473916 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 24473871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 2153952 - 2153997
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2153952 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 2153997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 17516290 - 17516335
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17516290 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 17516335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 20901326 - 20901371
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20901326 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 20901371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 29330815 - 29330770
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  29330815 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 29330770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 20917168 - 20917212
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  20917168 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 20917212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 32028866 - 32028822
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||    
T  32028866 aaggtaaggatgagactaacattcaataatcttgagtttatgatt 32028822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 263982 - 264020
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  263982 taaggtaagggtgagactaacattcaataatcttaagtc 264020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 38620384 - 38620346
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  38620384 taaggtaagggtgagactaacattcaataatcttaagtc 38620346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Complemental strand, 20566609 - 20566580
Alignment:
Q  301 gtcaatcaatctaaggtaagggtgagacta 330  Q
    ||||||||||||||||||||||||||||||    
T  20566609 gtcaatcaatctaaggtaagggtgagacta 20566580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 31251892 - 31251933
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  31251892 taaggtaagggtgagactatcattcagtgatcttaagtctat 31251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 8981 - 8729
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8981 aataatagaataagtagacttgggg--ctgaattagaaattaaagaagtttagtgagcttaagtagaattaagagaagtggttagtgatataaaagagga 8884  T
Q  221 gaaattaggttagaatagtttttaagt------------------gaaaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgt 302  Q
     |||||| |||||||||||||||| ||                  |||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  8883 taaattatgttagaatagtttttacgtgaaaacaaggatttgggagaaaacaaagagaagagaagagtcagagaatgagaagtctgtagaaccttgttgt 8784  T
Q  303 caatcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||||||  |||| |||||||||||||||||| |||||||    
T  8783 caatcaatctaagttaagggtggaactaacattcaataatcttgagtgtatgatt 8729  T

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Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 121 - 255
Target Start/End: Original strand, 12535475 - 12535609
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 220  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12535475 aataatagaataagtagacttggggggctgaataagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaagagga 12535574  T
Q  221 gaaattaggttagaatagtttttaagtgaaaacaa 255  Q
    |||||||||||||||||||||||| ||||||||||    
T  12535575 gaaattaggttagaatagtttttacgtgaaaacaa 12535609  T

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Target: chr3; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 53300623 - 53300717
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53300623 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagaaaagtggttagtgatataaaa 53300717  T

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Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 22146557 - 22146653
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaaga 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  22146557 aataattgaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagaaaagtggttagtaatataaaaga 22146653  T

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Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 28195655 - 28195577
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagt 199  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28195655 aataattgaataagtagatttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagaaaagt 28195577  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 8899664 - 8899620
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  8899664 aaggtaagggtgagactaacattcaataatcttgagtctatgatt 8899620  T

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Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 16282079 - 16282123
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  16282079 aaggtaagggtgagactaacattcaataatcttgagtctatgatt 16282123  T

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Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 38961158 - 38961202
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  38961158 aaggtaagggtgagactaacattcaataatcttgagtctatgatt 38961202  T

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Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 9510733 - 9510803
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaaga 194  Q
    |||||||||| |||||||| ||||||||||||||| ||| || ||||||||||  ||||||||||| ||||    
T  9510733 aatagaataattagacttgaggggctgaattagaatttagaggagtttagtggaattaagtagaataaaga 9510803  T

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Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 9518708 - 9518778
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaaga 194  Q
    |||||||||| |||||||| ||||||||||||||| ||| || ||||||||||  ||||||||||| ||||    
T  9518708 aatagaataattagacttgaggggctgaattagaatttagaggagtttagtggaattaagtagaataaaga 9518778  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 12119184 - 12119230
Alignment:
Q  311 ctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  12119184 ctaaggtaagggtgggactaacattcaataatcttgagtctatgatt 12119230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 10379981 - 10379936
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  10379981 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 10379936  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 20629512 - 20629557
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20629512 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 20629557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 24514325 - 24514280
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  24514325 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 24514280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 46823103 - 46823058
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  46823103 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 46823058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 55318624 - 55318669
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  55318624 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 55318669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 13937295 - 13937339
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  13937295 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 13937339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 16828274 - 16828326
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||||||    
T  16828274 atcaatctaaggtaagggtgggactatcattcagtgatcttaagtctatgatt 16828326  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 17444084 - 17444128
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  17444084 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 17444128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 41124780 - 41124736
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  41124780 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 41124736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 13938301 - 13938345
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| || || ||||||||||||||||||||||||||    
T  13938301 aaggtaagggtgggaataacattcaataatcttgagtctatgatt 13938345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 13437297 - 13437259
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatc 343  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  13437297 atcaatctaaggtaagggtgagactaacattcagtaatc 13437259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 55477440 - 55477402
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  55477440 taaggtaagggtgagactaacattcaataatcttaagtc 55477402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 5842926 - 5842893
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatctt 345  Q
    |||||||||||||||||||||||||||| |||||    
T  5842926 taaggtaagggtgagactatcattcaatgatctt 5842893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 11202273 - 11202228
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||||    
T  11202273 taaggtaagggtgagactagcattcaatcttcttaagtctatgatt 11202228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 350
Target Start/End: Complemental strand, 14671840 - 14671795
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  14671840 atcaatccaaggtaagggtgggactaacattcaataatcttaagtc 14671795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 26054435 - 26054480
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||| |||| || ||||||||    
T  26054435 taaggtaagggtgagactaacattcaatattcttaagcctatgatt 26054480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Original strand, 45577655 - 45577688
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatctt 345  Q
    ||||||||||||||||||| ||||||||||||||    
T  45577655 taaggtaagggtgagactaacattcaataatctt 45577688  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 1864365 - 1864405
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  1864365 tctaaggtaagggtgggactaacattcaataatcttaagtc 1864405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 31397 - 31303
Alignment:
Q  121 aataatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggttagtgatataaaa 215  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31397 aataattgaataagtagacttggggggctgaattagaatttaaagaagtttagtgggcttaagtagaattaagaaaagtggttagtgatataaaa 31303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 49997 - 49917
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggtta 204  Q
    |||| ||||| |||||||| ||||||||||||||| ||| || ||||||||||  ||||||||||||||||||||||||||    
T  49997 aatacaataattagacttgaggggctgaattagaatttagaggagtttagtggaattaagtagaattaagagaagtggtta 49917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 49843 - 49763
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaa-gtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||| ||||||||||||||||||||||| ||||| |  ||||||||||||   |||| |||||||||||||||||| |||||    
T  49843 aaaccaagagaagagaagagtcagagaa-gagaaagcttgtagaaccttgtaatcaaccaatctaaggtaagggtgggacta 49763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 26420 - 26500
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggtta 204  Q
    ||||| |||| |||||||| ||||||||||||||| ||| || ||||||||||  ||||||||||||||||||| ||||||    
T  26420 aatagcataattagacttgaggggctgaattagaatttagaggagtttagtggaattaagtagaattaagagaattggtta 26500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 357
Target Start/End: Original strand, 158761 - 158867
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagactatcattcaataatcttgagt 349  Q
    |||| ||||||||||||||||||||||| |||||    ||| ||||||||  ||||||||||||||||||||||| ||||| | |||||||||  |||||    
T  158761 aaaccaagagaagagaagagtcagagaa-gagaaagcggtaaaaccttgcgatcaatcaatctaaggtaagggtgggactaaccttcaataattctgagt 158859  T
Q  350 ctatgatt 357  Q
     |||||||    
T  158860 atatgatt 158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 16357 - 16434
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaa-gtatgtagaaccttgctgtcaatcaatctaaggtaagggtgaga 327  Q
    |||| ||||||||||||||||  ||||| ||||| |  ||||||||||||   ||||||||||||||||||||||||||    
T  16357 aaaccaagagaagagaagagttggagaa-gagaaagcttgtagaaccttgtgatcaatcaatctaaggtaagggtgaga 16434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 7626 - 7581
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  7626 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 7581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 10660 - 10705
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  10660 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 10705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 10826 - 10781
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  10826 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 16760 - 16805
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  16760 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 16805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 22014 - 21969
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  22014 taaggtaagggtgagactaacattcaataatcttgagtctatgatt 21969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 3155 - 3075
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagtggtta 204  Q
    |||||||||| |||||||| || |||||||||||| ||| || |||||||| |  ||||||||||||||||||| ||||||    
T  3155 aatagaataattagacttgaggtgctgaattagaatttagaggagtttagtagaattaagtagaattaagagaattggtta 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 19991 - 19916
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaagagaagt 199  Q
    |||||||||| |||||||  ||||||||||||||| ||| || ||||||||||  |||||||||||||||| ||||    
T  19991 aatagaataattagacttaaggggctgaattagaatttagaggagtttagtggaattaagtagaattaagaaaagt 19916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 19829 - 19788
Alignment:
Q  288 gtagaaccttgctgtcaatcaatctaaggtaagggtgagact 329  Q
    ||||||||||||  |||| |||||||||||||||||||||||    
T  19829 gtagaaccttgcaatcaaccaatctaaggtaagggtgagact 19788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 1200 - 1155
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1200 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 2096 - 2051
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||    
T  2096 taaggtaagggtgagactaacattcaataatcttaagtctatgatt 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 1550 - 1505
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1550 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 1505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 6897 - 6942
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  6897 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 6942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 18779 - 18734
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  18779 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 18734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 6257 - 6302
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  6257 taaggaaagggtgagactaacattcaataatcttgagtctatgatt 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 2918 - 2963
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2918 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 2963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 22700 - 22745
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  22700 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 22745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 6482 - 6552
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgggcttaagtagaattaaga 194  Q
    |||||||||| |||||||| ||||||||||||||| ||| || |||||||||   ||||||||||| ||||    
T  6482 aatagaataattagacttgaggggctgaattagaatttagaggagtttagtgaaattaagtagaataaaga 6552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 20527 - 20569
Alignment:
Q  315 ggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  20527 ggtaagggtgggactaacattcaataatcttgagtctatgatt 20569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 3662 - 3617
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  3662 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 34338 - 34293
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  34338 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 34293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 20686 - 20641
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20686 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 20641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 13031 - 13071
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  13031 tctaaggtaagggtgggactaacattcaataatcttaagtc 13071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 107317 - 107272
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  107317 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 107272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 115818 - 115773
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  115818 taaggtaagggtgggactaacattcaataatcttgagtctatgatt 115773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 11915 - 11871
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||    
T  11915 aaggtacgggtgagactaacattcaataatcttgagtctatgatt 11871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 6531 - 6452
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||| |||||||||||||| |||||||| |||||    ||||||||||||  |||||||||||||||||||||| ||||||    
T  6531 aaaccaagagaagagaagattcagagaa-gagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtaagacta 6452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 43169 - 43213
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  43169 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 43213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 185110 - 185066
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  185110 aaggtaagggtgggactaacattcaataatcttgagtctatgatt 185066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 172104 - 172150
Alignment:
Q  307 caatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||| |||||||||||| | ||||| |||||||    
T  172104 caatctaaggtaagggtgggactatcattcagtgatcttaagtctat 172150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 33567 - 33488
Alignment:
Q  250 aaacaaagagaagagaagagtcagagaatgagaagtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagacta 330  Q
    |||| ||||||| ||||||||||||||| |||||    ||||||||||||  ||||||||||||||||||||||| |||||    
T  33567 aaaccaagagaatagaagagtcagagaa-gagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtgggacta 33488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 5536 - 5491
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| || || ||||||||||||||||||||||||||    
T  5536 taaggtaagggtgggaataacattcaataatcttgagtctatgatt 5491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 36 - 81
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  36 taaggtaagggtgggactaacattcaataatcttgagtctgtgatt 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 6163 - 6118
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||    
T  6163 taaggtaaaggtgagactaacattcaataattttgagtctatgatt 6118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 36599 - 36644
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  36599 taaggtaagtgtgggactaacattcaataatcttgagtctatgatt 36644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 19 - 64
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||    
T  19 taaggtaagggtgagactaatattcaataatcttaagtctatgatt 64  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 5326 - 5367
Alignment:
Q  316 gtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||| ||||| |||||||||||||| |||||||||||    
T  5326 gtaagggtgggactaacattcaataatcttaagtctatgatt 5367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 60777 - 60736
Alignment:
Q  313 aaggtaagggtgagactatcattcaataatcttgagtctatg 354  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  60777 aaggtaagggtgggactaacattcaataatcttgagtctatg 60736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 56220 - 56265
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  56220 taaggtaagggtgggactaacattcaataatcttgggtctatgatt 56265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 135161 - 135116
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  135161 taaggtaagggtgggactaacattcaataatcttgggtctatgatt 135116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 137630 - 137585
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  137630 taaggtaagggtgggactaacattcaataatcttgggtctatgatt 137585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 140099 - 140054
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  140099 taaggtaagggtgggactaacattcaataatcttgggtctatgatt 140054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 142568 - 142523
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  142568 taaggtaagggtgggactaacattcaataatcttgggtctatgatt 142523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 145037 - 144992
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  145037 taaggtaagggtgggactaacattcaataatcttgggtctatgatt 144992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 2998 - 3082
Alignment:
Q  258 agaagagaagagtcagagaatgagaa-gtatgtagaaccttgctgtcaatcaatctaaggtaagggtgagactatcattcaataat 342  Q
    |||| ||||||||| ||||| ||||| || |||||||||||||  || ||||||| |||||||||||| ||||| | |||||||||    
T  2998 agaacagaagagtcggagaa-gagaaagtctgtagaaccttgcaatcgatcaatccaaggtaagggtgggactaaccttcaataat 3082  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 668 - 623
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  668 taaggtaagggtgagactaacattcaataatctcgactctatgatt 623  T

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Target: scaffold0457 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 10891 - 10939
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||    
T  10891 atcaatctaaggtaagggtgggactatcattcagtgatcttaagtctat 10939  T

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Target: scaffold0301 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 11315 - 11363
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||    
T  11315 atcaatctaaggtaagggtgggactatcattcagtgatcttaagtctat 11363  T

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Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 15715 - 15763
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||    
T  15715 atcaatctaaggtaagggtgggactatcattcagtgatcttaagtctat 15763  T

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Target: scaffold0695 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 6893 - 6855
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  6893 taaggtaagggtgagactaacattcaataatcttaagtc 6855  T

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Target: scaffold0454 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 531 - 493
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  531 taaggtaagggtgagactaacattcaataatcttaagtc 493  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 12447 - 12401
Alignment:
Q  311 ctaaggtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    |||||||||||||||||||| ||||||||  |||| |||||||||||    
T  12447 ctaaggtaagggtgagactagcattcaatcttcttaagtctatgatt 12401  T

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Target: scaffold0422 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 343
Target Start/End: Complemental strand, 4015 - 3981
Alignment:
Q  309 atctaaggtaagggtgagactatcattcaataatc 343  Q
    |||||||||||||||||||||| ||||||||||||    
T  4015 atctaaggtaagggtgagactaacattcaataatc 3981  T

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Target: scaffold0363 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 10194 - 10156
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  10194 taaggtaagggtgagactaacattcaataatcttaagtc 10156  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 33837 - 33875
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  33837 taaggtaagggtgagactaacattcaataatcttaagtc 33875  T

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Target: scaffold1128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 549 - 508
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  549 taaggtaagggtgagactatcattcagtgatcttaagtctat 508  T

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Target: scaffold0679 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Original strand, 1584 - 1617
Alignment:
Q  312 taaggtaagggtgagactatcattcaataatctt 345  Q
    |||||||||||||||||||||||||||| |||||    
T  1584 taaggtaagggtgagactatcattcaatgatctt 1617  T

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Target: scaffold0546 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 7981 - 7940
Alignment:
Q  316 gtaagggtgagactatcattcaataatcttgagtctatgatt 357  Q
    ||||||||| ||||| |||||||||||||| |||||||||||    
T  7981 gtaagggtgggactaacattcaataatcttaagtctatgatt 7940  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 339
Target Start/End: Complemental strand, 11449 - 11420
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaat 339  Q
    ||||||||||||||||||||||||||||||    
T  11449 tctaaggtaagggtgagactatcattcaat 11420  T

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Target: scaffold0254 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 21701 - 21661
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  21701 tctaaggtaagggtgggactaacattcaataatcttaagtc 21661  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 17316 - 17368
Alignment:
Q  124 aatagaataagtagacttggggggctgaattagaaattaaagaagtttagtgg 176  Q
    |||||||||| |||||||| ||||||||||||||| ||| || || |||||||    
T  17316 aatagaataattagacttgaggggctgaattagaatttagaggaggttagtgg 17368  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 12240 - 12200
Alignment:
Q  310 tctaaggtaagggtgagactatcattcaataatcttgagtc 350  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  12240 tctaaggtaagggtgggactaacattcaataatcttaagtc 12200  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 209919 - 209871
Alignment:
Q  305 atcaatctaaggtaagggtgagactatcattcaataatcttgagtctat 353  Q
    |||||| ||||||||||||| |||||||||||| | ||||| |||||||    
T  209919 atcaatgtaaggtaagggtgggactatcattcagtgatcttaagtctat 209871  T

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