View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1343_low_116 (Length: 341)

Name: NF1343_low_116
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1343_low_116
NF1343_low_116
[»] chr1 (56 HSPs)
chr1 (7-299)||(49740945-49741238)
chr1 (7-231)||(12494868-12495099)
chr1 (13-284)||(16433113-16433386)
chr1 (7-183)||(9982945-9983121)
chr1 (7-228)||(44615478-44615707)
chr1 (7-228)||(44792862-44793091)
chr1 (24-191)||(34673329-34673496)
chr1 (12-228)||(29871288-29871511)
chr1 (7-223)||(18354088-18354312)
chr1 (7-223)||(45866193-45866417)
chr1 (9-223)||(17134806-17135028)
chr1 (7-268)||(3627947-3628219)
chr1 (12-159)||(35936896-35937043)
chr1 (7-183)||(40087518-40087695)
chr1 (7-191)||(23966729-23966915)
chr1 (7-191)||(28297790-28297976)
chr1 (7-223)||(29936273-29936497)
chr1 (7-299)||(49250692-49251005)
chr1 (7-191)||(17092006-17092191)
chr1 (7-191)||(24236808-24236993)
chr1 (7-183)||(34610930-34611107)
chr1 (7-191)||(42439717-42439902)
chr1 (9-223)||(51421717-51421939)
chr1 (7-223)||(36187228-36187452)
chr1 (7-223)||(19572520-19572743)
chr1 (7-160)||(42707908-42708062)
chr1 (7-191)||(50426708-50426887)
chr1 (7-165)||(20774489-20774649)
chr1 (7-299)||(5180902-5181209)
chr1 (10-108)||(44632266-44632364)
chr1 (27-223)||(16408823-16409023)
chr1 (7-137)||(34060121-34060251)
chr1 (92-191)||(13390356-13390455)
chr1 (92-223)||(23490779-23490917)
chr1 (7-166)||(24710715-24710875)
chr1 (7-166)||(39616160-39616320)
chr1 (50-163)||(2514668-2514782)
chr1 (21-108)||(13020559-13020647)
chr1 (7-78)||(23493497-23493568)
chr1 (225-299)||(24710942-24711017)
chr1 (141-183)||(16903515-16903557)
chr1 (221-289)||(24236690-24236759)
chr1 (225-289)||(40087393-40087458)
chr1 (134-179)||(41477011-41477056)
chr1 (233-299)||(34611176-34611243)
chr1 (225-299)||(36187139-36187214)
chr1 (225-299)||(44793100-44793175)
chr1 (184-268)||(2581612-2581697)
chr1 (140-181)||(8880439-8880480)
chr1 (7-40)||(13390306-13390339)
chr1 (142-183)||(23058459-23058500)
chr1 (231-299)||(29936523-29936592)
chr1 (134-183)||(48125738-48125787)
chr1 (184-228)||(10778570-10778614)
chr1 (184-228)||(33293534-33293578)
chr1 (225-292)||(51421953-51422021)
[»] chr4 (50 HSPs)
chr4 (7-231)||(1724311-1724542)
chr4 (7-220)||(26564694-26564914)
chr4 (7-288)||(5902551-5902847)
chr4 (10-188)||(19534321-19534499)
chr4 (9-231)||(6482036-6482266)
chr4 (7-299)||(37348986-37349287)
chr4 (10-255)||(12825439-12825690)
chr4 (7-221)||(7985136-7985354)
chr4 (7-176)||(13770518-13770687)
chr4 (7-223)||(48459343-48459567)
chr4 (7-223)||(6382281-6382506)
chr4 (7-223)||(44317396-44317621)
chr4 (7-223)||(7608832-7609056)
chr4 (10-289)||(32585353-32585648)
chr4 (7-191)||(21423723-21423908)
chr4 (7-222)||(47550363-47550586)
chr4 (7-189)||(31918608-31918792)
chr4 (9-299)||(43893092-43893402)
chr4 (7-191)||(37107274-37107458)
chr4 (7-163)||(9230146-9230301)
chr4 (7-223)||(31752318-31752542)
chr4 (7-191)||(42299653-42299837)
chr4 (7-139)||(425686-425818)
chr4 (20-191)||(11122917-11123089)
chr4 (7-223)||(11027934-11028159)
chr4 (7-191)||(39046815-39046999)
chr4 (10-238)||(32596178-32596413)
chr4 (7-154)||(42774623-42774771)
chr4 (8-175)||(39188379-39188545)
chr4 (50-191)||(55826671-55826814)
chr4 (7-191)||(47239433-47239618)
chr4 (24-183)||(28695198-28695357)
chr4 (7-113)||(29755456-29755562)
chr4 (12-118)||(39375148-39375253)
chr4 (50-166)||(13015324-13015446)
chr4 (7-84)||(53906437-53906514)
chr4 (7-132)||(4766419-4766546)
chr4 (25-107)||(15987372-15987455)
chr4 (7-62)||(13015550-13015605)
chr4 (151-255)||(29527819-29527930)
chr4 (110-188)||(53906356-53906434)
chr4 (146-191)||(15987310-15987355)
chr4 (151-237)||(24637199-24637281)
chr4 (134-183)||(42907876-42907925)
chr4 (135-255)||(568408-568523)
chr4 (135-177)||(11172960-11173002)
chr4 (135-255)||(10574396-10574523)
chr4 (204-237)||(11173040-11173073)
chr4 (204-237)||(31782680-31782713)
chr4 (184-228)||(43309530-43309574)
[»] chr3 (59 HSPs)
chr3 (7-231)||(4016044-4016275)
chr3 (7-231)||(4557305-4557536)
chr3 (7-191)||(53631761-53631945)
chr3 (7-188)||(34119515-34119694)
chr3 (7-223)||(48390825-48391048)
chr3 (7-299)||(49025537-49025837)
chr3 (24-191)||(54317018-54317185)
chr3 (7-183)||(31126850-31127026)
chr3 (24-228)||(42758248-42758459)
chr3 (7-223)||(39655281-39655505)
chr3 (7-299)||(44252603-44252916)
chr3 (7-223)||(44953443-44953667)
chr3 (7-191)||(19111592-19111775)
chr3 (9-299)||(22535760-22536071)
chr3 (7-223)||(44172482-44172706)
chr3 (7-223)||(44179182-44179406)
chr3 (7-180)||(830866-831039)
chr3 (12-175)||(30682683-30682846)
chr3 (7-299)||(49579920-49580233)
chr3 (7-299)||(52572465-52572778)
chr3 (20-299)||(7469697-7469997)
chr3 (7-191)||(29284192-29284377)
chr3 (7-183)||(29842164-29842341)
chr3 (7-191)||(39728527-39728712)
chr3 (7-223)||(20086865-20087077)
chr3 (7-163)||(41937077-41937233)
chr3 (7-223)||(34025810-34026034)
chr3 (7-222)||(34154274-34154493)
chr3 (7-223)||(6738413-6738626)
chr3 (7-172)||(10823759-10823925)
chr3 (7-183)||(44106847-44107024)
chr3 (47-191)||(44639170-44639315)
chr3 (10-191)||(52198013-52198196)
chr3 (7-183)||(17146205-17146382)
chr3 (7-191)||(23580684-23580868)
chr3 (7-222)||(43582434-43582656)
chr3 (7-137)||(23547073-23547204)
chr3 (125-299)||(23546867-23547055)
chr3 (57-223)||(23154073-23154245)
chr3 (97-165)||(23910317-23910385)
chr3 (122-299)||(48305560-48305757)
chr3 (10-117)||(48306657-48306765)
chr3 (9-89)||(55438829-55438909)
chr3 (184-231)||(30616281-30616328)
chr3 (184-246)||(1337081-1337143)
chr3 (142-231)||(10043282-10043378)
chr3 (225-299)||(39655192-39655267)
chr3 (225-299)||(39728765-39728840)
chr3 (225-299)||(44953354-44953429)
chr3 (225-299)||(54317238-54317313)
chr3 (219-268)||(10371223-10371273)
chr3 (141-183)||(30904870-30904912)
chr3 (231-299)||(4015963-4016032)
chr3 (225-289)||(29284430-29284495)
chr3 (52-120)||(1772540-1772608)
chr3 (221-268)||(3385806-3385854)
chr3 (240-299)||(12369103-12369163)
chr3 (9-113)||(14208260-14208363)
chr3 (225-276)||(42243481-42243533)
[»] chr6 (39 HSPs)
chr6 (7-289)||(14505943-14506233)
chr6 (12-299)||(24602787-24603082)
chr6 (7-173)||(14032413-14032579)
chr6 (7-189)||(30816114-30816299)
chr6 (7-299)||(27534540-27534853)
chr6 (7-299)||(10187999-10188305)
chr6 (7-222)||(12678103-12678324)
chr6 (7-299)||(32853700-32854013)
chr6 (7-255)||(7393863-7394118)
chr6 (7-223)||(2367182-2367406)
chr6 (7-191)||(3483970-3484155)
chr6 (22-221)||(24225569-24225776)
chr6 (47-223)||(27738668-27738852)
chr6 (12-183)||(14254820-14254991)
chr6 (93-255)||(32053031-32053206)
chr6 (20-223)||(5863391-5863602)
chr6 (7-191)||(10142565-10142750)
chr6 (47-227)||(11762342-11762529)
chr6 (20-192)||(12141254-12141427)
chr6 (7-117)||(14410954-14411064)
chr6 (12-117)||(14245109-14245214)
chr6 (13-188)||(12309441-12309610)
chr6 (110-223)||(32532500-32532620)
chr6 (134-231)||(13769056-13769160)
chr6 (147-255)||(14410832-14410946)
chr6 (7-84)||(32532420-32532497)
chr6 (154-231)||(28079696-28079780)
chr6 (225-299)||(31496528-31496603)
chr6 (225-299)||(31501914-31501989)
chr6 (184-268)||(9402629-9402714)
chr6 (225-299)||(30986347-30986422)
chr6 (184-228)||(18908934-18908978)
chr6 (225-299)||(5863302-5863377)
chr6 (141-223)||(15498315-15498404)
chr6 (184-255)||(29199861-29199932)
chr6 (202-255)||(8320771-8320824)
chr6 (134-183)||(29341240-29341289)
chr6 (229-268)||(9442527-9442567)
chr6 (225-268)||(12141479-12141523)
[»] chr8 (35 HSPs)
chr8 (7-299)||(17469112-17469412)
chr8 (7-190)||(24568796-24568978)
chr8 (7-228)||(1012474-1012703)
chr8 (7-223)||(43113634-43113857)
chr8 (7-188)||(34139304-34139485)
chr8 (7-222)||(45235921-45236144)
chr8 (7-231)||(20399448-20399680)
chr8 (7-299)||(32302916-32303230)
chr8 (7-191)||(24927805-24927990)
chr8 (20-191)||(24870071-24870242)
chr8 (12-223)||(29108830-29109049)
chr8 (7-299)||(36131848-36132147)
chr8 (31-255)||(14186205-14186432)
chr8 (7-166)||(28977186-28977346)
chr8 (7-223)||(27932269-27932493)
chr8 (10-120)||(35215364-35215474)
chr8 (9-223)||(1063365-1063587)
chr8 (7-165)||(2075907-2076066)
chr8 (30-182)||(34776945-34777098)
chr8 (7-166)||(4230791-4230951)
chr8 (7-113)||(29089567-29089672)
chr8 (13-183)||(34021341-34021509)
chr8 (7-159)||(17220573-17220726)
chr8 (7-188)||(11255058-11255236)
chr8 (7-223)||(39445584-39445799)
chr8 (184-255)||(9642327-9642398)
chr8 (7-84)||(40248502-40248579)
chr8 (110-231)||(40248371-40248499)
chr8 (141-255)||(5700347-5700468)
chr8 (141-183)||(30481476-30481518)
chr8 (225-299)||(4230649-4230724)
chr8 (225-299)||(24928043-24928118)
chr8 (11-84)||(31325125-31325197)
chr8 (134-178)||(9476073-9476117)
chr8 (225-268)||(27932507-27932551)
[»] scaffold0036 (1 HSPs)
scaffold0036 (7-231)||(33250-33481)
[»] chr5 (45 HSPs)
chr5 (7-299)||(12447238-12447537)
chr5 (7-255)||(38006446-38006701)
chr5 (7-191)||(2412774-2412958)
chr5 (7-191)||(35194037-35194221)
chr5 (11-247)||(2985008-2985251)
chr5 (7-223)||(4582975-4583199)
chr5 (7-177)||(27088414-27088583)
chr5 (7-166)||(3573081-3573240)
chr5 (7-191)||(30115340-30115524)
chr5 (7-299)||(5908608-5908921)
chr5 (7-223)||(17853302-17853524)
chr5 (7-191)||(28045511-28045696)
chr5 (9-191)||(1218615-1218796)
chr5 (7-299)||(4920682-4920995)
chr5 (7-153)||(33862270-33862415)
chr5 (7-215)||(35311679-35311894)
chr5 (21-188)||(18206888-18207056)
chr5 (13-228)||(6155924-6156145)
chr5 (7-223)||(15890063-15890286)
chr5 (7-191)||(22694949-22695134)
chr5 (30-191)||(6092566-6092728)
chr5 (7-282)||(12834511-12834808)
chr5 (7-222)||(12866561-12866785)
chr5 (7-191)||(40517662-40517847)
chr5 (7-221)||(42987490-42987712)
chr5 (7-299)||(29245871-29246184)
chr5 (7-191)||(13402052-13402235)
chr5 (7-188)||(3564778-3564960)
chr5 (9-191)||(30996455-30996637)
chr5 (7-221)||(27302746-27302965)
chr5 (141-299)||(10127072-10127243)
chr5 (22-175)||(42717696-42717849)
chr5 (13-156)||(8453457-8453598)
chr5 (10-137)||(20973587-20973715)
chr5 (21-179)||(6369566-6369725)
chr5 (184-255)||(10822503-10822574)
chr5 (75-166)||(33420404-33420494)
chr5 (7-84)||(10126964-10127041)
chr5 (141-222)||(27900411-27900499)
chr5 (92-163)||(15564578-15564649)
chr5 (221-299)||(38973012-38973091)
chr5 (225-299)||(40517900-40517975)
chr5 (225-289)||(17853223-17853288)
chr5 (154-191)||(20973544-20973581)
chr5 (134-166)||(17153153-17153185)
[»] chr2 (33 HSPs)
chr2 (7-299)||(6027820-6028121)
chr2 (7-188)||(31942236-31942417)
chr2 (12-191)||(19104888-19105067)
chr2 (10-223)||(24414140-24414361)
chr2 (7-299)||(30846802-30847116)
chr2 (7-191)||(36128153-36128339)
chr2 (7-191)||(13705408-13705593)
chr2 (7-191)||(14540643-14540823)
chr2 (7-299)||(9632243-9632556)
chr2 (9-222)||(45256682-45256903)
chr2 (7-222)||(12193836-12194059)
chr2 (7-163)||(16226803-16226958)
chr2 (7-215)||(10920502-10920711)
chr2 (7-299)||(13830593-13830905)
chr2 (7-223)||(37106556-37106773)
chr2 (7-188)||(8915987-8916169)
chr2 (20-268)||(37999353-37999616)
chr2 (7-191)||(7314695-7314880)
chr2 (7-223)||(10208438-10208662)
chr2 (7-191)||(42798035-42798221)
chr2 (7-223)||(44746117-44746341)
chr2 (10-222)||(45115418-45115638)
chr2 (7-113)||(37472854-37472961)
chr2 (7-166)||(18106162-18106322)
chr2 (7-70)||(37319799-37319862)
chr2 (134-230)||(35248386-35248489)
chr2 (184-231)||(15546786-15546833)
chr2 (134-232)||(25210362-25210467)
chr2 (225-289)||(12341695-12341760)
chr2 (134-179)||(35965320-35965365)
chr2 (135-231)||(38342519-38342622)
chr2 (202-238)||(35409160-35409196)
chr2 (184-268)||(37472709-37472806)
[»] chr7 (66 HSPs)
chr7 (7-231)||(2630574-2630805)
chr7 (7-228)||(5376947-5377175)
chr7 (7-231)||(12980238-12980470)
chr7 (24-268)||(3920417-3920669)
chr7 (7-289)||(27850261-27850556)
chr7 (7-231)||(18825872-18826103)
chr7 (28-289)||(26622834-26623103)
chr7 (35-289)||(26004415-26004675)
chr7 (7-228)||(16078875-16079103)
chr7 (7-299)||(17885326-17885639)
chr7 (7-189)||(25782956-25783138)
chr7 (7-299)||(35074330-35074644)
chr7 (7-191)||(18125275-18125460)
chr7 (9-223)||(21702522-21702744)
chr7 (20-289)||(30650505-30650795)
chr7 (7-299)||(7779869-7780182)
chr7 (10-268)||(24425246-24425511)
chr7 (12-191)||(37579129-37579308)
chr7 (20-183)||(46127238-46127398)
chr7 (7-223)||(45379967-45380192)
chr7 (7-223)||(16866030-16866254)
chr7 (7-222)||(45885774-45885997)
chr7 (7-166)||(37182136-37182296)
chr7 (7-223)||(38139800-38140025)
chr7 (12-223)||(39456023-39456240)
chr7 (7-181)||(44794084-44794259)
chr7 (7-223)||(38152763-38152972)
chr7 (47-183)||(17851755-17851892)
chr7 (13-176)||(23328477-23328641)
chr7 (7-154)||(44985984-44986130)
chr7 (7-189)||(37196047-37196230)
chr7 (49-191)||(44658496-44658639)
chr7 (7-191)||(25905489-25905674)
chr7 (7-166)||(24753037-24753196)
chr7 (7-189)||(44734406-44734589)
chr7 (7-223)||(41741458-41741681)
chr7 (51-268)||(16811635-16811860)
chr7 (7-191)||(45708912-45709094)
chr7 (7-299)||(39316856-39317169)
chr7 (7-84)||(26004675-26004752)
chr7 (21-223)||(41103528-41103741)
chr7 (92-223)||(3226954-3227092)
chr7 (24-108)||(5916196-5916280)
chr7 (141-268)||(23475225-23475360)
chr7 (7-223)||(43507294-43507530)
chr7 (110-299)||(10072431-10072640)
chr7 (7-223)||(25979925-25980149)
chr7 (7-84)||(3227698-3227775)
chr7 (146-231)||(3157084-3157176)
chr7 (141-299)||(23533535-23533700)
chr7 (141-268)||(19439972-19440107)
chr7 (7-82)||(10072350-10072425)
chr7 (225-299)||(18825785-18825860)
chr7 (225-299)||(24753262-24753337)
chr7 (184-231)||(27896475-27896522)
chr7 (110-156)||(3274761-3274807)
chr7 (184-222)||(33841124-33841162)
chr7 (225-289)||(12980476-12980541)
chr7 (225-289)||(16866268-16866333)
chr7 (186-255)||(21750830-21750899)
chr7 (225-289)||(43507544-43507609)
chr7 (202-255)||(43550393-43550446)
chr7 (184-228)||(10995837-10995881)
chr7 (135-179)||(32546182-32546226)
chr7 (225-264)||(37182373-37182413)
chr7 (225-268)||(37218104-37218148)
[»] scaffold0022 (1 HSPs)
scaffold0022 (7-289)||(90454-90750)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-183)||(197382-197558)
[»] scaffold0294 (1 HSPs)
scaffold0294 (7-189)||(14632-14814)
[»] scaffold0135 (1 HSPs)
scaffold0135 (7-163)||(36012-36167)
[»] scaffold0189 (1 HSPs)
scaffold0189 (7-166)||(4113-4274)
[»] scaffold0027 (2 HSPs)
scaffold0027 (7-156)||(6263-6412)
scaffold0027 (233-300)||(7798-7866)
[»] scaffold0097 (1 HSPs)
scaffold0097 (7-166)||(33440-33603)
[»] scaffold0014 (1 HSPs)
scaffold0014 (7-88)||(14295-14376)
[»] scaffold0519 (1 HSPs)
scaffold0519 (7-188)||(10157-10335)
[»] scaffold0902 (1 HSPs)
scaffold0902 (13-88)||(748-823)
[»] scaffold1630 (1 HSPs)
scaffold1630 (7-72)||(1479-1544)
[»] scaffold0095 (1 HSPs)
scaffold0095 (7-84)||(32685-32761)
[»] scaffold0795 (1 HSPs)
scaffold0795 (225-268)||(318-361)


Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 49741238 - 49740945
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49741238 tccaacaatatgttcactttaacatttgttaaaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 49741139  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgttt 206  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  49741138 ataacataacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcccatatccatgttt 49741039  T
Q  207 tgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||| ||||||    
T  49741038 tgaaattggggaaaacctaaacccagtcaaaaaggggaaaatccgtcaaattgagtttggttcaagtggataaccacgggtatggattttgttg 49740945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 12494868 - 12495099
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||||||||  ||||||| |||||||    
T  12494868 tccaacaatatgttcactttaacatttgttagaccgataaatttagttgctcctttaaatatcagtggtagtttttataacacgccaattataaaacaaa 12494967  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||| ||| | |||||| ||||||||||| |||| ||||||||||||||||||||| || |||||||||||||       |||| |||||||||||    
T  12494968 ataacatgtcatgtcaacatatagtagttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatc 12495067  T
Q  200 catgttttgaaatcggggaaaacctaaaccca 231  Q
    | ||||||||||||||| |||||| |||||||    
T  12495068 cgtgttttgaaatcgggaaaaaccaaaaccca 12495099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 13 - 284
Target Start/End: Complemental strand, 16433386 - 16433113
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgaca 112  Q
    |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |   ||||||||||||||||| |||    
T  16433386 aatatgctcactttaatatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttataata---caattatcaaacaaaataaca 16433290  T
Q  113 tgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgtt 205  Q
    |||||||| ||||||||||| ||||||||||| |||  |||||||||||||||| |||   ||||||||||       |||||||||||||| || ||||    
T  16433289 tgacatatcaacataaagtaattttctgcatttggggtgggtttgggtatgggttcgg---gggtacctatatatccgttacccgtcccatacccgtgtt 16433193  T
Q  206 ttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgg 284  Q
    |||||||||| ||||||  ||||||| |||||| |||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  16433192 ttgaaatcggagaaaactcaaacccaatcaaaatggggaaaatccgtcaaattgagtttggttcggatgggtaaccacgg 16433113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 183
Target Start/End: Complemental strand, 9983121 - 9982945
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||    ||||||||||||||    
T  9983121 tccagcaatatgctcactttaacatttgttagaccgattaatttagttgctcctttgaatatcaatggtagttttgataacatgagaattatcaaacaaa 9983022  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    || |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  9983021 ataacatgatatattaacataaagtaattttctgcattcgggatgggtttgggtatgggttcggggtgggtacctat 9982945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 44615707 - 44615478
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  44615707 tccaacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaa 44615608  T
Q  107 atgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    || ||||| ||||| || ||||||||| |||| || ||| |||||||||||||||||| ||  |||||||||||||||       ||||||||||||||     
T  44615607 ataacatggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatac 44615508  T
Q  199 ccatgttttgaaatcggggaaaacctaaac 228  Q
    || |||||| ||||| ||||||||| ||||    
T  44615507 ccgtgtttttaaatcagggaaaacccaaac 44615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 44792862 - 44793091
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  44792862 tccaacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaa 44792961  T
Q  107 atgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    || ||||| ||||| || ||||||||| |||| || ||| |||||||||||||||||| ||  |||||||||||||||       ||||||||||||||     
T  44792962 ataacatggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatac 44793061  T
Q  199 ccatgttttgaaatcggggaaaacctaaac 228  Q
    || |||||| ||||| ||||||||| ||||    
T  44793062 ccgtgtttttaaatcagggaaaacccaaac 44793091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 34673496 - 34673329
Alignment:
Q  24 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaa 123  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||| ||||| ||    
T  34673496 tttaacatttgttagaccggttgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaaataacatggcatatcaa 34673397  T
Q  124 cataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    |||||||||||||||| | ||||| || ||||||||||||||| |||||||||||||||| |||||||    
T  34673396 cataaagtagttttcttcgttcggaacaggtttgggtatgggttcggggtgggtacctatatacccgt 34673329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 29871511 - 29871288
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    ||||||| ||| ||||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||    |||||||||||||||| ||    
T  29871511 caatatgctcattttaatatttgttagaccgattgatgtagttgctcctttaaatatcaatggtagtttttataacatgggaattatcaaacaaaataac 29871412  T
Q  112 atgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgt 204  Q
    ||||||||| |||||||| || |||||| ||||||||||||||||||||||| || | ||||||||||||||       ||||| |||||||| ||||||    
T  29871411 atgacatatcaacataaaataattttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgt 29871312  T
Q  205 tttgaaatcggggaaaacctaaac 228  Q
    ||||||||||| ||||||| ||||    
T  29871311 tttgaaatcggagaaaacccaaac 29871288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 18354312 - 18354088
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||| ||||| || | ||||||||| || ||||||||||||| |||||||||| |||||   ||||||||||||||    
T  18354312 tccaacaatatgttcactttaacatttgatagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 18354213  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| |||||||| || |||| | |||| |||||| || ||||||| ||| ||||||||| || |||       ||||||||||||||     
T  18354212 aataacatgacatatcaacataaaataattttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatac 18354113  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    |||||||||||||||||||||||||    
T  18354112 ccatgttttgaaatcggggaaaacc 18354088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 45866417 - 45866193
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||    |||||||||||||    
T  45866417 tccaacaatatgttcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 45866318  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| ||||||||||| |||| | |||| |||| |||| |||||||| ||  |||||||||||||||       ||||| ||| ||||     
T  45866317 aataacatgacatatcaacataaagtaattttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatac 45866218  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||||||||||    
T  45866217 ccgtgttttgaaatcggggaaaacc 45866193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 17134806 - 17135028
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaaaa 107  Q
    ||||||||||||||||||||||||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||||    
T  17134806 caacaatatgttcactttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 17134905  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | ||||||||||| ||||||||||| |||| | |||  |||||| || ||||||||||| |||||  |||||||||       ||||||||| |||| ||    
T  17134906 taacatgacatatcaacataaagtaattttttacatatgggacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcataccc 17135005  T
Q  201 atgttttgaaatcggggaaaacc 223  Q
     ||||||||||||||||||||||    
T  17135006 gtgttttgaaatcggggaaaacc 17135028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 268
Target Start/End: Complemental strand, 3628219 - 3627947
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||||||||||||||||||  | | ||||||||| ||| |||||||| ||| ||||||||||| ||||    |||||||||||||    
T  3628219 tccaacaatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatattaatggtagtttttattaacatgataattatcaaacaa 3628120  T
Q  106 aatgacatgacatattaacataaagtagttttctg--cattcgggacgggtttgggtatgggtccggggtgggtaccta-------tttacccgtcccat 196  Q
    ||| ||||||||||| ||||||||||| |||| |   |||| ||||| ||  || |||||||| |||||||||||||||        |||||||||||||    
T  3628119 aataacatgacatatcaacataaagtaattttttttacatttgggactggaatgagtatgggttcggggtgggtacctacatacccgttacccgtcccat 3628020  T
Q  197 atccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    | || |||||||||||||||||||||||| |||||||||||| ||| ||||| | || |||||||||||||||    
T  3628019 acccgtgttttgaaatcggggaaaacctatacccagtcaaaacgggaaaaactcatcaaattgagtttggttc 3627947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 35937043 - 35936896
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||   |||||||||||||||| ||    
T  35937043 caatatgctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttgtaacacggaaattatcaaacaaaataac 35936944  T
Q  112 atgacatattaacataaagtagttttctgcattcgggacgggtttggg 159  Q
    ||||||||| ||||||||||| |||||| |||||  ||||||||||||    
T  35936943 atgacatatcaacataaagtaattttctacattcatgacgggtttggg 35936896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 183
Target Start/End: Complemental strand, 40087695 - 40087518
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  40087695 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 40087596  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||| |||||| |||| ||||||||||| |||| | |||| ||||||||| || ||||| || ||||||||||||||||    
T  40087595 aataacatgatatatcaacataaagtaattttttacatttgggacgggtatgagtatgagttcggggtgggtacctat 40087518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 23966729 - 23966915
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacat--caattatcaaaca 104  Q
    |||||||||||| ||||||||||||||||||||  || | ||||||||| | |||||||||||||||||||||||||||| ||||  |||||||||||||    
T  23966729 tccaacaatatgctcactttaacatttgttagatggaatgatttagttgatactttaaatatcaatagtagtttttataa-acatgacaattatcaaaca 23966827  T
Q  105 aaatgacatgacatattaacataaagt-agttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    |||| |||| |||||| |||||||||| | |||| | |||| ||||||||| || |||||||| |||||||||||||||| |||||||    
T  23966828 aaataacataacatatcaacataaagtaatttttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgt 23966915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 28297790 - 28297976
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  28297790 tccaacaataagctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 28297889  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||| ||| |||| | |||| ||||||||||||||||||||| |||||||||||||||| |||||||    
T  28297890 aataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgt 28297976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 29936273 - 29936497
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||| ||| ||    
T  29936273 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaa 29936372  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||     
T  29936373 aataacattacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatac 29936472  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || | |||||| |||||||||||||    
T  29936473 ccgtattttgagatcggggaaaacc 29936497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 49251005 - 49250692
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| || |||||||||||||  |||||||||| ||||   ||||||||||||||    
T  49251005 tccaacaataagctcactttcacatttgttagacaaaataatttagttgatcttttaaatatcaatgatagtttttatcaacatgacaattatcaaacaa 49250906  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    |||  ||| |||||| |||||||||||||||| | |||| ||||||||||||||||||||| || ||||| |||||||       ||||||||||||||     
T  49250905 aatagcataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatac 49250806  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || |||||||| ||||||||||            ||| |||||||||||||| || ||||||||||| |||||| |||||||| |  |||||||||||||    
T  49250805 ccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggttcgggcggataaccacggg 49250706  T
Q  286 tatggatattgttg 299  Q
    |||| || ||||||    
T  49250705 tatgaattttgttg 49250692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 17092191 - 17092006
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||||||||||||||||||| |||||  || | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  17092191 tccaacaatatgttcactttaacatttattagatggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 17092092  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||| ||||||| || ||||| |||||||    
T  17092091 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggcatgggttcggggtgagtgcctatatacccgt 17092006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 24236993 - 24236808
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| || |||||| |||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  24236993 tccaacaataagtccactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 24236894  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||| || |||| | |||| |||||||||||| |||||||| |||||||||||||||| |||||||    
T  24236893 aataacataacatatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgt 24236808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 183
Target Start/End: Original strand, 34610930 - 34611107
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| || ||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  34610930 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 34611029  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||| | || |||||| ||||||||||||| || | |||| ||||||||||||||||||||| ||||||| ||||||||    
T  34611030 aataatataacatatcaacataaagtagtattttacatttgggacgggtttgggtatgggttcggggtgagtacctat 34611107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 42439902 - 42439717
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | |||||||||||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  42439902 tccaacaataagctcactttaacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 42439803  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| ||||||||||| |||| | |||| |||| | |||||| ||||||| |||||||||||||||| |||||||    
T  42439802 aataacataacatatcaacataaagtaattttttacatttgggatgagtttggatatgggttcggggtgggtacctatatacccgt 42439717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 51421717 - 51421939
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaa 107  Q
    |||||||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||| |||| ||||||||||| ||||   ||||||||||||||||    
T  51421717 caacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatagcaatggtagtttttattaacatggcaattatcaaacaaaa 51421816  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | |||| |||||| |||||| |||| |||| | |||| ||||||||||||||||||||| |||||||||||| |||       |||||||||||||| ||    
T  51421817 taacataacatatcaacatagagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccataccc 51421916  T
Q  201 atgttttgaaatcggggaaaacc 223  Q
     |||||||| |||||| ||||||    
T  51421917 gtgttttgagatcgggaaaaacc 51421939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 36187452 - 36187228
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||||||||  | | ||||||||| || ||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  36187452 tccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 36187353  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||| ||  ||| | |||| ||||||||||||||||||||| | ||||||||||||||       ||||||||||||||     
T  36187352 aataacataacatatcaacataaaataactttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatac 36187253  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| |||||||||||||    
T  36187252 ccgtgttttgagatcggggaaaacc 36187228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 19572743 - 19572520
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| |||||||||||||||||||||  | | ||||| ||| ||||| || ||||||| ||||||||||| ||||   ||||||||||||||    
T  19572743 tccaccaatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaa-tatcaatggtagtttttattaacatggcaattatcaaacaa 19572645  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||||||| || |||||||| ||||||||||||||||       ||||| ||||||||     
T  19572644 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatac 19572545  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||| ||||||    
T  19572544 ccgtgttttgaaatcgggaaaaacc 19572520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 42708062 - 42707908
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||||||||| |||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  42708062 tccaacaatatgctcactttaacatctgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 42707963  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggt 160  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||||||| |||||    
T  42707962 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgggt 42707908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 50426887 - 50426708
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||||||||||||| |||| || | ||||||||| ||||||||||||||||  ||||||||| |||||   ||||||||||||||    
T  50426887 tccaacaatatgctcactttaacatttgtaagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 50426788  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| ||||||||||| |||||||||||  ||| | |||| |||||      |||||||||| |||||||||||||||| |||||||    
T  50426787 aataacatgacatatcaacataaagtaaatttttacatttgggac------gggtatgggttcggggtgggtacctatatacccgt 50426708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 165
Target Start/End: Original strand, 20774489 - 20774649
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||||  |||||||| |||||   ||||||||||||||    
T  20774489 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaataaaagtttttattaacatgacaattatcaaacaa 20774588  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatggg 165  Q
    ||| |||| |||||| |||||||||||| |||| | |||| ||||||||||||||||||||    
T  20774589 aataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatggg 20774649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 5180902 - 5181209
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||| |||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  5180902 tccaacaatatgctcactttaaaatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 5181001  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| |||||||| || |||| | |||| || ||      ||||||||||  ||||||||| |||||       ||||||||||||||     
T  5181002 aataacatgacatatcaacataaaataattttttacatttggaac------gggtatgggtttggggtgggtgcctatatacccgttacccgtcccatac 5181095  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || | |||||||||||||||||            |||||||||||||||||| |||||||||||||| |||||| |||||||| |  || ||||| ||||    
T  5181096 ccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaaattgaatttggttcgggcgggtaaccgcggg 5181195  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  5181196 tatgggttttgttg 5181209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 44632364 - 44632266
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaat 108  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||  ||||| |||||||||||    
T  44632364 aacaatatgatcactttaacatttgttagacctattgatttagttgctcctttaaatatcaatgatagtttttataacacgacaattgtcaaacaaaat 44632266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 16408823 - 16409023
Alignment:
Q  27 aacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaaaatgacatgacatattaaca 125  Q
    |||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||||| |||||||||    |||    
T  16408823 aacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat----aca 16408918  T
Q  126 taaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcgggga 218  Q
    ||||||| |||| | |||| ||  ||||||| | ||||||| |||||| |||||||||       |||||||||||||| || ||||||||||| |||||    
T  16408919 taaagtaattttttacatttggagcgggtttagctatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattgggga 16409018  T
Q  219 aaacc 223  Q
    |||||    
T  16409019 aaacc 16409023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 34060251 - 34060121
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||| || ||||||| |||||   ||||||||||||||    
T  34060251 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggttgtttttattaacatgacaattatcaaacaa 34060152  T
Q  106 aatgacatgacatattaacataaagtagtttt 137  Q
    ||| |||| |||||| ||||||||||| ||||    
T  34060151 aataacat-acatatcaacataaagtaatttt 34060121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 13390356 - 13390455
Alignment:
Q  92 caattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||| | |||| ||||||||| |||||||| || |||||||||||||||| |||||||    
T  13390356 caattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgagttcggggtgggtacctatatacccgt 13390455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 23490917 - 23490779
Alignment:
Q  92 caattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------t 184  Q
    ||||||||||||||||| |||| ||||||  ||||||| ||||||| | |||| ||||||||||| ||||||||| ||||||||||||||||       |    
T  23490917 caattatcaaacaaaataacataacatatccacataaattagttttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgt 23490818  T
Q  185 tacccgtcccatatccatgttttgaaatcggggaaaacc 223  Q
    ||||||||||||| || ||||| || |||||||||||||    
T  23490817 tacccgtcccatacccgtgtttcgagatcggggaaaacc 23490779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 24710715 - 24710875
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||| ||| |||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  24710715 tccaacaataagctcattttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 24710814  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| |||| |  ||| ||||||||||| |||| | |||| |||||||||||| ||||||||    
T  24710815 aataacataatgtatcaacataaagtaattttttacatttgggacgggtttgagtatgggt 24710875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 39616160 - 39616320
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||||||||| |||||||| || | |||||  || || ||||||||||||| ||| ||||||| ||||    ||||| |||||||    
T  39616160 tccaacaatatgctcactttaacatctgttagacggaatgatttaactgatcatttaaatatcaatggtaatttttattaacatgataattagcaaacaa 39616259  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||||||| |||||||||||    
T  39616260 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgggtatgggt 39616320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 2514668 - 2514782
Alignment:
Q  50 tagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatatt-aacataaagtagttttctgcattcggg 148  Q
    ||||| || |||||||||||||| ||||||||||| ||||  ||||||||||||||||| ||||||||| || |||||||| || |||| ||||||||||    
T  2514668 tagttactactttaaatatcaatggtagtttttattacacggcaattatcaaacaaaataacatgacatgttcaacataaaataattttatgcattcggg 2514767  T
Q  149 acgggtttgggtatg 163  Q
    || | ||| ||||||    
T  2514768 acagatttaggtatg 2514782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 13020559 - 13020647
Alignment:
Q  21 cactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaaaat 108  Q
    |||||||| ||||||||||| || | ||||||||| | |||||||||||||| |||||||||| |||||   |||||||||||||||||    
T  13020559 cactttaatatttgttagacggaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaat 13020647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 23493568 - 23493497
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagt 78  Q
    |||||||||| | ||||||  |||||||||||||  | ||||||||||| |||||||||||||||| |||||    
T  23493568 tccaacaataagctcacttccacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagt 23493497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 24710942 - 24711017
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| | ||||||| ||||||| ||| | ||||||    
T  24710942 aaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgggtggataatcacgggtgtgggttttgttg 24711017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 16903515 - 16903557
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  16903515 cattcgggacgggtttgggtatgagttcggggtgggtacctat 16903557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 24236759 - 24236690
Alignment:
Q  221 acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||| |  || |||||| |||||||    
T  24236759 acctaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccatgggtatg 24236690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 40087458 - 40087393
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtcaa-ttgagtttggttcagatggataaccacgggtatg 289  Q
    |||| ||||||||| |||||||| ||||||| |||| ||||||||||| |||||||| ||||||||    
T  40087458 aaactcagtcaaaacggggaaaatccgtcaaattgaatttggttcagacggataaccgcgggtatg 40087393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 41477056 - 41477011
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtac 179  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||    
T  41477056 ttttctgctttcgggacgggtttgggtatggattcggggtgggtac 41477011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 34611176 - 34611243
Alignment:
Q  233 tcaaaaaggggaaaacccgtcaa-ttgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||| |||||||||||||||| |||  ||||||||||  || ||||||||||||||||| ||||||    
T  34611176 tcaaaacggggaaaacccgtcaaattggatttggttcaggcgggtaaccacgggtatggattttgttg 34611243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 36187214 - 36187139
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||| | ||||||||||||||| |  || |||| |||||||||| | ||||||    
T  36187214 aaacccagtcaaaacggggaaaacccgccaaattgagtttggttcgggcgggtaacgacgggtatgggttttgttg 36187139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 44793100 - 44793175
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| ||| |||||||||| |||||||||||||   | ||| ||||||||||||||| | ||||||    
T  44793100 aaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttg 44793175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 2581612 - 2581697
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    ||||||||||| || ||||||||| ||||| | ||||||  |||| |||||||||   | |||||||||| |||||||||||||||    
T  2581612 ttacccgtcccttacccatgttttaaaatcagagaaaactcaaactcagtcaaaagctgaaaaacccgtcaaattgagtttggttc 2581697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 8880439 - 8880480
Alignment:
Q  140 gcattcgggacgggtttgggtatgggtccggggtgggtacct 181  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  8880439 gcatttgggacgggtttgggtatgggtccagggtggatacct 8880480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 13390306 - 13390339
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagac 40  Q
    |||||||||||| |||||||||||||||||||||    
T  13390306 tccaacaatatgctcactttaacatttgttagac 13390339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 23058459 - 23058500
Alignment:
Q  142 attcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    |||||||  |||||||||||||||| ||||||||||||||||    
T  23058459 attcgggtagggtttgggtatgggttcggggtgggtacctat 23058500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 29936523 - 29936592
Alignment:
Q  231 agtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||| |||||||||||||| ||||| ||||||||| |  || ||||||||||||||| | ||||||    
T  29936523 agtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 29936592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 48125787 - 48125738
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    |||||| |||||| |||| |||||||||||||| |||||||| |||||||    
T  48125787 ttttctacattcgcgacgagtttgggtatgggttcggggtggatacctat 48125738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 10778614 - 10778570
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaac 228  Q
    |||||||||||||| || ||||||||||||||| ||||| |||||    
T  10778614 ttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaac 10778570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 33293578 - 33293534
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaac 228  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||    
T  33293578 ttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaac 33293534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 51421953 - 51422021
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggat 292  Q
    |||||||||||||| ||||||||||| || ||||| ||||||||| |  || ||||||||| |||||||    
T  51421953 aaacccagtcaaaatggggaaaacccatcaaattgggtttggttcgggcgggtaaccacggatatggat 51422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 1724542 - 1724311
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1724542 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatctaacaaa 1724443  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||||||||||||| |    
T  1724442 ataacatgacatatcaacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacc 1724343  T
Q  200 catgttttgaaatcggggaaaacctaaaccca 231  Q
    |||||||||||||||||||||||| |||||||    
T  1724342 catgttttgaaatcggggaaaacccaaaccca 1724311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 26564694 - 26564914
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||  |||||||||||||||  || ||||||||||||    
T  26564694 tccaacaatatgttcactttaacatttgtttgaccgattgatttagttgttccgttaaatatcaatgatagtttttataacacggcagttatcaaacaaa 26564793  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
     | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||       |||||||||||||| |    
T  26564794 ctaacatgacatatcaacataaagtagttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacc 26564893  T
Q  200 catgttttgaaatcggggaaa 220  Q
    |  ||||||||||||||||||    
T  26564894 cgcgttttgaaatcggggaaa 26564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 5902847 - 5902551
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  5902847 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 5902748  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| | || |||||| |||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||     
T  5902747 aataagataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatac 5902648  T
Q  199 ccatgttttgaaatcggggaaa------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtat 288  Q
    || ||||| || ||||||||||      ||| |||||||||||||| |||||||||||||| ||||||||||||||| |  || |||||||||||||    
T  5902647 ccgtgtttcgagatcggggaaaacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtat 5902551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 19534321 - 19534499
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatg 109  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||  |||||||||||||||||     
T  19534321 aacaatatgctcactttaacatttgttagaccgattgatttagttgctcctttagatatcaatggtagtttttataacacgacaattatcaaacaaaata 19534420  T
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    ||||||||||| |||||||| || |||||| |||||| |||||||||||||||| || || ||||||||||||| ||||    
T  19534421 acatgacatatcaacataaaataattttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacc 19534499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 6482266 - 6482036
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaat 108  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||  |||||||||||||||||    
T  6482266 caacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgttagtttttataacacgacaattatcaaacaaaat 6482167  T
Q  109 gacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta-------tttacccgtcccatatcc 200  Q
     ||||| ||||| || ||||| ||| |||| |||||| ||||||||||||||||||||| |||||||||||| ||       ||||| ||||||||| ||    
T  6482166 aacatggcatatcaatataaattagtttttttgcatttgggacgggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccataccc 6482067  T
Q  201 atgttttgaaatcggggaaaacctaaaccca 231  Q
     |||||| |||| |||||||||| |||||||    
T  6482066 gtgtttttaaattggggaaaacccaaaccca 6482036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 37348986 - 37349287
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| |   ||||||||||||||    
T  37348986 tccagcaatatgctcactttaagatttgttagaccgattaatttagttgctcctttaaatatcaacggtagtttttataacgcgagaattatcaaacaaa 37349085  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgttt 206  Q
    || ||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||| |    || || |||||    
T  37349086 ataacatggcatatcaacataaaataattttctgcattcgggacgggtttgggtatgggttcagggtggatacctatatacccat----tacccgtgttt 37349181  T
Q  207 tgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggata 293  Q
    ||||||||||||||            ||| |||||||||||||| |||||||||| ||| ||||| ||||||||| |  || ||||||||||||||| |     
T  37349182 tgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccacgggtatgggtt 37349281  T
Q  294 ttgttg 299  Q
    ||||||    
T  37349282 ttgttg 37349287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 12825690 - 12825439
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatg 109  Q
    ||||||||  ||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||   ||||||||||||||||     
T  12825690 aacaatatcctcactttaatatttattagaccaattgatttagttgctcctttaaatatcaattttagtttttataacacgataattatcaaacaaaata 12825591  T
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccat 202  Q
    |||||| |||| ||||||||||| ||||||||| ||||||| ||||||||||| ||| | |||||||||| |||       |||||||||||||| || |    
T  12825590 acatgatatatcaacataaagtaattttctgcactcgggacaggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgt 12825491  T
Q  203 gttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||| ||||||    
T  12825490 gttttgaaatcggggaaaacccaaactcagtc-aaaacgggaaaacacgtcaa 12825439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 7985354 - 7985136
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttt-ataacacatcaattatcaaacaa 105  Q
    |||| |||||| ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||  ||||||||| |||||||  ||||||||||||||    
T  7985354 tccatcaatattttcactttaacatttgttagaccaattgatttagttgctcatttaaatatcaacggtagttttttataacacgacaattatcaaacaa 7985255  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta---tttacccgtcccatatccat 202  Q
    ||| ||||||| ||| |||||||| || ||||||||||||||||||||||||||||||||| |||| || |||| ||    ||| |||||||||| ||||    
T  7985254 aataacatgacttatcaacataaaatacttttctgcattcgggacgggtttgggtatgggttcgggatgagtacatacatgttatccgtcccatacccat 7985155  T
Q  203 gttttgaaatcggggaaaa 221  Q
    ||||||||||||| |||||    
T  7985154 gttttgaaatcggagaaaa 7985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 13770687 - 13770518
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||| || |||||||||||||   ||||||||||||||    
T  13770687 tccaacaatatgttcactttaacatttgtttgaccgattgatttagttgctccttcaaatattaatggtcgtttttataacacggtaattatcaaacaaa 13770588  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtggg 176  Q
    || ||||| | |||||||||||| ||||||| ||||||||||||||||||| ||||| || |||||||||    
T  13770587 ataacatggcttattaacataaaatagttttatgcattcgggacgggtttgagtatgagttcggggtggg 13770518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 48459343 - 48459567
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||||||||||| ||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  48459343 tccaacaatatgctcactttaacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 48459442  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| |||| |||| ||||||||||| ||||||||||||||||       |||||||| |||||     
T  48459443 aataacataacatatcaacataaagtaattttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatac 48459542  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    |||||||||||||||||||||||||    
T  48459543 ccatgttttgaaatcggggaaaacc 48459567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 6382506 - 6382281
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  6382506 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 6382407  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| |||||| |||||||| ||| |||| | |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||    
T  6382406 aataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccata 6382307  T
Q  198 tccatgttttgaaatcggggaaaacc 223  Q
     || |||||||| ||||| |||||||    
T  6382306 cccgtgttttgagatcggagaaaacc 6382281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 44317396 - 44317621
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  44317396 tccaacaataaactcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatcgtagtttttattaacatgacaattatcaaacaa 44317495  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| |||||| |||||||||||| |||| | |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||    
T  44317496 aataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccata 44317595  T
Q  198 tccatgttttgaaatcggggaaaacc 223  Q
     || ||||| || |||||||||||||    
T  44317596 cccgtgtttcgagatcggggaaaacc 44317621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 7608832 - 7609056
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||   ||||||||| ||||   ||||||||||||||    
T  7608832 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgacagtttttattaacatgacaattatcaaacaa 7608931  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||| ||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||     
T  7608932 aataacataacatatcaacatagagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatac 7609031  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||| || |||||||||||||    
T  7609032 ccgtgtttcgagatcggggaaaacc 7609056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 10 - 289
Target Start/End: Original strand, 32585353 - 32585648
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaat-agtagtttttat-aacacatcaattatcaaacaaaa 107  Q
    ||||||| | ||||||||||| ||||||||| || | ||||||||| |||||||||||||||| | |||||||||| ||||   ||||||||||||||||    
T  32585353 aacaatacgctcactttaacaattgttagacggaatgatttagttgatcctttaaatatcaatgattagtttttattaacatgacaattatcaaacaaaa 32585452  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | ||| ||||||| |||||||||||  ||| | |||| ||||||||||||||||||||| | ||||||||||||||       ||||| |||||||| ||    
T  32585453 taacaagacatataaacataaagtaagtttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccataccc 32585552  T
Q  201 atgttttgaaatcggggaaa------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
     |||||||||||||| ||||      ||| ||||||||||||||||||||||||| ||| ||||| ||||||||  |  |||||||| ||||||||    
T  32585553 gtgttttgaaatcggagaaaattcatacccaaacccagtcaaaaaggggaaaaccggtcaaattgggtttggtttgggcggataaccgcgggtatg 32585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 21423723 - 21423908
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||  |||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  21423723 tccaacaataaattcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 21423822  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| | || |||||| |||||||||||||||| | |||| |||||||||||| ||||||||  ||||||||||||||| |||||||    
T  21423823 aataatataacatatcaacataaagtagttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgt 21423908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 47550586 - 47550363
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  47550586 tccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 47550487  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||     
T  47550486 aataacataacatatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatac 47550387  T
Q  199 ccatgttttgaaatcggggaaaac 222  Q
    || |||||||| ||||||||||||    
T  47550386 ccgtgttttgagatcggggaaaac 47550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 31918792 - 31918608
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  31918792 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 31918693  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttaccc 189  Q
    ||| |||| |||||| |||||||||||| |||| | |||| ||||||||||||||||||||| ||||||||||| |||| |||||    
T  31918692 aataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgggtaactatataccc 31918608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 299
Target Start/End: Original strand, 43893092 - 43893402
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaa 107  Q
    |||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||||    
T  43893092 caacaataagctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 43893191  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | |||| |||||| |||||||||||||||| | |||| ||||||||||||||||||  | |||||||| |||||||       |||||||||||||| ||    
T  43893192 taacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccataccc 43893291  T
Q  201 atgttttgaaatcggggaaa-----------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtat 288  Q
     ||||| || ||||||||||           ||| |||||||||||||| |||||||||||||| ||||| |||||| || |  || |||||||||||||    
T  43893292 gtgtttcgagatcggggaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggctcgggcgggtaaccacgggtat 43893391  T
Q  289 ggatattgttg 299  Q
    || | ||||||    
T  43893392 gggttttgttg 43893402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 37107274 - 37107458
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| ||| ||||| |||||| ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||   |||||||||||||||    
T  37107274 tccagcaatatgctcattttaatatttgtcagaccgattgatttagttgcttctttaaataccaatggtagtttttataacatggcaattatcaaacaaa 37107373  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || ||||||||||| ||||||||||| ||||||||||||||||    ||| |||||   | |||||||||||||||| |||||||    
T  37107374 ataacatgacatatcaacataaagtaattttctgcattcgggatatattttggtataaattcggggtgggtacctatatacccgt 37107458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 9230146 - 9230301
Alignment:
Q  7 tccaacaatatgttcacttt-aacatttgttagaccgatttatttagttgct--cctttaaatatcaatagtagtttttataacacatcaattatcaaac 103  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||  || |||||||||    
T  9230146 tccaacaatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaac 9230245  T
Q  104 aaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatg 163  Q
    ||||| |||||||||||||    |  ||| ||||||||||||||||||||||||| ||||    
T  9230246 aaaataacatgacatatta----atggtaattttctgcattcgggacgggtttggttatg 9230301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 31752318 - 31752542
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| ||||||||||||||| ||||| || | ||||||||| || ||||||||||| |  |||||||||| ||||   ||||||||||||||    
T  31752318 tccagcaatatgctcactttaacatttgatagacggaatgatttagttgatcttttaaatatcattgttagtttttattaacatgacaattatcaaacaa 31752417  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||||| ||||||||||| ||||||||| ||||||       |||| |||| ||||     
T  31752418 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatac 31752517  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||||||||||    
T  31752518 ccgtgttttgaaatcggggaaaacc 31752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 42299653 - 42299837
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||  |  | |||||||||||| |||||||||||| ||||||||||| |||||   ||||||||||||||    
T  42299653 tccaacaatatgttcactttaacatttgttagagaggatgatttagttgctcatttaaatatcaacagtagtttttattaacaagacaattatcaaacaa 42299752  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| ||||| ||||| ||||||||||| |||| |  ||| |||||| ||||| |||||||| | |||||||||||||| |||||||    
T  42299753 aataacatggcatatcaacataaagtactttt-tatatttgggacgtgtttgagtatgggttcagggtgggtacctatatacccgt 42299837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 425686 - 425818
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||   |||||||||||||||    
T  425686 tccagcaatatgttcactttaagatttgttagaccgattgatttagttgttcttttaaatatcaatggtagtttttataacatgacaattatcaaacaaa 425785  T
Q  107 atgacatgacatattaacataaagtagttttct 139  Q
    || ||||| ||||| ||||||||||| ||||||    
T  425786 ataacatggcatatcaacataaagtaattttct 425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 11123089 - 11122917
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||| ||||||| ||||   ||||||| ||||||||| |||  ||||    
T  11123089 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtactttttattaacatgacaattataaaacaaaataacaaaacat 11122990  T
Q  119 attaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || |||||||||||||||| | |||| |||||||||||| |||||||| |||||||||||||||| |||||||    
T  11122989 atcaacataaagtagttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgt 11122917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 11027934 - 11028159
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||| |||||||||||||| |||||   ||||||||||||||    
T  11027934 tccaacaataagatcactttcacatttgttagacaaaatgatttagttgatcctttaaatataaatagtagtttttattaacatgacaattatcaaacaa 11028033  T
Q  106 aatgacatgacatattaacataaagt-agttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| |||||| || ||||||| | |||| | |||| ||||| |||||||||||| || ||||||||||||||||       ||||||||||||||    
T  11028034 aataacataacatatcaatataaagtaatttttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccata 11028133  T
Q  198 tccatgttttgaaatcggggaaaacc 223  Q
     || |||||||| |||||||||||||    
T  11028134 cccgtgttttgagatcggggaaaacc 11028159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 39046815 - 39046999
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||| ||||||||||||||||| || | ||||||||  |||||||||||||||  |||||||||| |||||   ||||||||||||||    
T  39046815 tccaacaatatgctcattttaacatttgttagacggaatgatttagttaatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaa 39046914  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||| |||||||||||  || |||||||||||| |||||||    
T  39046915 aataacat-acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggagtgggtacctatatacccgt 39046999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 32596413 - 32596178
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatg 109  Q
    ||||||||| ||||||||| |||||||||||  | | ||||||||| ||||| |||||| |||  ||||||||||||||   |||||||||||| |||||    
T  32596413 aacaatatgctcactttaaaatttgttagacttaatgatttagttgttccttcaaatattaatgctagtttttataacatgacaattatcaaaccaaatg 32596314  T
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccat 202  Q
    |||||  |||| |||||||| || |||||| |||||| |||  ||||||||||| ||  | |||||| ||||||       |||||||||||||| || |    
T  32596313 acatggtatatcaacataaaataattttctacattcgagacaagtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgt 32596214  T
Q  203 gttttgaaatcggggaaaacctaaacccagtcaaaa 238  Q
    |||||||||||||||||||||  |||||| ||||||    
T  32596213 gttttgaaatcggggaaaaccccaacccattcaaaa 32596178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 42774623 - 42774771
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||| ||||||||||||||||  || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  42774623 tccaacaatatgttcattttaacatttgttagaaggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 42774722  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggt 154  Q
    ||| ||||||||||| ||||||||||| |||| | ||||  ||||||||    
T  42774723 aataacatgacatatcaacataaagtaattttttacattttggacgggt 42774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 39188379 - 39188545
Alignment:
Q  8 ccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaa 107  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||  | |||||||||| ||| ||||||||| ||||||  || |||||||||||||    
T  39188379 ccaacaatatgttcactttaacatttgttagaacgattgatttagttttttctttaaatataaatggtagttttt-taacacgacagttatcaaacaaaa 39188477  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgg 175  Q
    | ||||||||||| ||||||||  | |||| ||||||||||| | ||||||  ||||||  |||||||    
T  39188478 taacatgacatatcaacataaaacaattttatgcattcgggatgagtttggacatgggtttggggtgg 39188545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 55826814 - 55826671
Alignment:
Q  50 tagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctg-cattcgg 147  Q
    |||||| |||||||||||||||| ||||||||||| |||    ||||||||||||||||| |||| |||||| |||||||||||||||| |  |||| ||    
T  55826814 tagttgatcctttaaatatcaatggtagtttttattaacgtgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgg 55826715  T
Q  148 gacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||    
T  55826714 gacgggtttggatatgggttcggggtgggtacctatatacccgt 55826671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 47239618 - 47239433
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| ||||||||||||||| || |   | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  47239618 tccagcaatatgctcactttaacatttgataaatgaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 47239519  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||| ||| ||||||||||| | ||||||| |||||| |||||||    
T  47239518 aataacatgacatatcaacataaaataattttttacatttgggacaggtatgggtatgggttcagggtgggaacctatatacccgt 47239433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 28695357 - 28695198
Alignment:
Q  24 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaa 123  Q
    |||||||||||||| ||||| | |||||||||||||||||||||| |||  |||||||||||||    ||||||||||| ||||| ||||  ||||| ||    
T  28695357 tttaacatttgttaaaccgaatgatttagttgctcctttaaatattaatgatagtttttataacgtgacaattatcaaataaaataacattgcatatcaa 28695258  T
Q  124 cataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||||||| | ||| ||  ||| | |||| ||||||||||| || ||||||| ||||||||    
T  28695257 cataaagcaatttcctatatttgagacgagtttgggtatgagttcggggtgagtacctat 28695198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 29755562 - 29755456
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||  ||| |||||||||||||||| ||||| |||||||| || |||||||||||||| ||||| ||||||||||   ||||||||||||||    
T  29755562 tccaacaatatactcattttaacatttgttagatcgattgatttagttacttctttaaatatcaatggtagtgtttataacacggtaattatcaaacaaa 29755463  T
Q  107 atgacat 113  Q
    || ||||    
T  29755462 ataacat 29755456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 39375148 - 39375253
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    ||||||| |||||| |||||||||| ||  |||||||||||||| |||||||||||| | | ||||||||||||||||  ||||||||||||||||| ||    
T  39375148 caatatgctcactt-aacatttgttcgattgatttatttagttgttcctttaaatattagtggtagtttttataacacggcaattatcaaacaaaataac 39375246  T
Q  112 atgacat 118  Q
    |||||||    
T  39375247 atgacat 39375253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 13015446 - 13015324
Alignment:
Q  50 tagttgctcctttaaatatcaatagtagtttttataacac----atcaa--ttatcaaacaaaatgacatgacatattaacataaagtagttttctgcat 143  Q
    ||||||||||||||||||||||| |||||||||||||||     || ||  |||||||||||||| ||||||||||| |||||||| || |||| | |||    
T  13015446 tagttgctcctttaaatatcaatggtagtttttataacatgaaaatgaaaattatcaaacaaaataacatgacatatcaacataaaataattttttacat 13015347  T
Q  144 tcgggacgggtttgggtatgggt 166  Q
    ||| |||||||||| ||||||||    
T  13015346 tcgagacgggtttgagtatgggt 13015324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 53906514 - 53906437
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    |||||||||| ||||||||||||||||||||||  || | ||||||||| ||| ||||||||||||||||||||||||    
T  53906514 tccaacaatacgttcactttaacatttgttagaaggaatgatttagttgatccattaaatatcaatagtagtttttat 53906437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 4766546 - 4766419
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta--taacacatcaattatcaaaca 104  Q
    |||||||||||||| ||||||||||||||||||   | | ||||||||  ||||||||||||||||  ||||||||   |||||   ||||||||||| |    
T  4766546 tccaacaatatgtttactttaacatttgttagaggtaatgatttagtttatcctttaaatatcaatgatagttttttattaacatgacaattatcaaata 4766447  T
Q  105 aaatgacatgacatattaacataaagta 132  Q
    |||| |||| |||||| |||||||||||    
T  4766446 aaataacataacatatcaacataaagta 4766419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 15987455 - 15987372
Alignment:
Q  25 ttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaaaa 107  Q
    |||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||||    
T  15987455 ttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 15987372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 13015605 - 13015550
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctccttt 62  Q
    ||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  13015605 tccaataatatgttcactttaacatctgttagaccgaataatttagttgctccttt 13015550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 29527819 - 29527930
Alignment:
Q  151 gggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaagggg 243  Q
    |||||||||||||||| |||||||||||| |||       ||||||||| | || || | |||||||||||||||||||| ||||||  |||||  ||||    
T  29527819 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaaccctatcaaagcgggg 29527918  T
Q  244 aaaacccgtcaa 255  Q
    ||||||||||||    
T  29527919 aaaacccgtcaa 29527930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 53906434 - 53906356
Alignment:
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    ||||||||||| ||||| ||||| |||| | |||| |||||| |||| | ||||||| |||||||||||||||| ||||    
T  53906434 acatgacatatcaacatgaagtaattttttacatttgggacgagtttagatatgggttcggggtgggtacctatatacc 53906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 15987355 - 15987310
Alignment:
Q  146 gggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||    
T  15987355 gggacgggtttgggtatgggttcggggtgggtatctatatacccgt 15987310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 24637199 - 24637281
Alignment:
Q  151 gggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaa 237  Q
    |||||||||||||||||| ||||||| || ||| | |||||    || || | |||||||||||||||||||| |||||||||||||    
T  24637199 gggtttgggtatgggtcctgggtgggcacatatatccccgt----tacccgtattttgaaatcggggaaaacccaaacccagtcaaa 24637281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 42907876 - 42907925
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    |||||| ||||||||||| |||||||||||||  ||||||||||||||||    
T  42907876 ttttctacattcgggacgagtttgggtatgggctcggggtgggtacctat 42907925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 568408 - 568523
Alignment:
Q  135 tttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtc 234  Q
    ||||| ||||||||   ||||||||||||||| |||||||||||| ||| | |||     ||  || | ||||||||||||| |||||| ||||| ||||    
T  568408 tttctacattcgggtaaggtttgggtatgggttcggggtgggtacatatatcccc-----attaccctattttgaaatcgggaaaaacccaaacctagtc 568502  T
Q  235 aaaaaggggaaaacccgtcaa 255  Q
    |||  ||||||||||||||||    
T  568503 aaatcggggaaaacccgtcaa 568523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 11172960 - 11173002
Alignment:
Q  135 tttctgcattcgggacgggtttgggtatgggtccggggtgggt 177  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  11172960 tttctacattcgggaagggtttgggtatgggttcggggtgggt 11173002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 10574523 - 10574396
Alignment:
Q  135 tttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaa 227  Q
    ||||| ||||||||  ||||||||||||| || ||||| |||||| |||       ||||||||||| || |  | || |||||||||||||||   |||    
T  10574523 tttctacattcgggtagggtttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaa 10574424  T
Q  228 cccagtcaaaaaggggaaaacccgtcaa 255  Q
    ||||||||||  ||||||||||||||||    
T  10574423 cccagtcaaatcggggaaaacccgtcaa 10574396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 11173040 - 11173073
Alignment:
Q  204 ttttgaaatcggggaaaacctaaacccagtcaaa 237  Q
    |||||||||||||||||||| |||||||||||||    
T  11173040 ttttgaaatcggggaaaacccaaacccagtcaaa 11173073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 31782680 - 31782713
Alignment:
Q  204 ttttgaaatcggggaaaacctaaacccagtcaaa 237  Q
    |||||||||||||||||||| |||||||||||||    
T  31782680 ttttgaaatcggggaaaacccaaacccagtcaaa 31782713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 43309530 - 43309574
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaac 228  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||    
T  43309530 ttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaac 43309574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 8e-89; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 4016275 - 4016044
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4016275 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcgatagtagtttttataacacatcaattatcaaacaaa 4016176  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||       ||| |||||||||| |    
T  4016175 ataacatgacatatcaacataaggtagttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacc 4016076  T
Q  200 catgttttgaaatcggggaaaacctaaaccca 231  Q
    |||||||||||||||||||||||| |||||||    
T  4016075 catgttttgaaatcggggaaaacccaaaccca 4016044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 4557536 - 4557305
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4557536 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 4557437  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||| ||||||||||| ||||||||||||||||  | ||||||||||||| ||||||||||||||||       |||||||||||||| |    
T  4557436 ataacatgacatatcaacataaagtaattttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacc 4557337  T
Q  200 catgttttgaaatcggggaaaacctaaaccca 231  Q
    |||||||||||| ||||||||||| |||||||    
T  4557336 catgttttgaaaacggggaaaacccaaaccca 4557305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 53631761 - 53631945
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  53631761 tccaacaatatgctcactttatcatttgttagaccgatcgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaa 53631860  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || ||||| ||||| ||||||||||| ||||||  |||||||||| ||||| |||||||| |||||||||||||||| |||||||    
T  53631861 ataacatggcatatcaacataaagtaattttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgt 53631945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 34119515 - 34119694
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||||||  |||||||||||||||  |||||||||||||||    
T  34119515 tccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcatttcaatatcaatgttagtttttataacacgacaattatcaaacaaa 34119614  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    ||   ||| ||||| |||| |||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||    
T  34119615 at--aatggcatatcaacacaaagtagttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacc 34119694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 48391048 - 48390825
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||| |||||||||||||| || | ||||||||| || ||||||||||||| ||||||||| |||||   |||||||||||||||    
T  48391048 tccaacaatatgttcacttcaacatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttttaacatgacaattatcaaacaaa 48390949  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||| ||||||||||| |||| | | |||||||||||| ||||||||||| | || |||||||||||       |||||||||||||| |    
T  48390948 ataacatgacatatcaacataaagtaattttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacc 48390849  T
Q  200 catgttttgaaatcggggaaaacc 223  Q
    | ||||||||||||||||||||||    
T  48390848 cgtgttttgaaatcggggaaaacc 48390825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 49025537 - 49025837
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||| |||| | ||||||| |||||| ||||||  | | ||||||||| |||||||||||||||| ||||||||||| |||| | ||||||||||||||    
T  49025537 tccaataataagctcactttcacatttattagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacataacaattatcaaacaa 49025636  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||| |||||| |||| | |||| ||||||||||||||||||||| | || || ||||||||       ||||||||||||||     
T  49025637 aataacataacatatcaacacaaagtaattttttacatttgggacgggtttgggtatgggttc-ggatgtgtacctatatacctgttacccgtcccatac 49025735  T
Q  199 ccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgt 297  Q
    || |||||||| ||||||||||||| ||||||||||||||  || ||||||| || ||||| |||||||||||  || ||||||||||||||||| ||||    
T  49025736 ccgtgttttgagatcggggaaaacccaaacccagtcaaaacaggaaaaacccatcaaattgggtttggttcaggcgggtaaccacgggtatggattttgt 49025835  T
Q  298 tg 299  Q
    ||    
T  49025836 tg 49025837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 54317018 - 54317185
Alignment:
Q  24 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaa 123  Q
    |||||||||||||||||   || |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||| ||    
T  54317018 tttaacatttgttagacatgttgatttagttgctcctttaaatatcaatagtagtttttataacacggcaattatcaaacaaaataacatggcatatcaa 54317117  T
Q  124 cataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||||||||| |||||| | || |||||||||||||| |||||| |||||||||||||||| |||||||    
T  54317118 cataaagtaattttcttcgtttgggacgggtttgggaatgggttcggggtgggtacctatatacccgt 54317185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 183
Target Start/End: Complemental strand, 31127026 - 31126850
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||  |||||||||||| ||  |||||||||||||||    
T  31127026 tccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataatacgacaattatcaaacaaa 31126927  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    || ||||| ||||| |||| || ||||||||||||||| |||||| ||||||||||| || |||||||| |||||||    
T  31126926 ataacatggcatatcaacacaatgtagttttctgcatttgggacgagtttgggtatgagttcggggtggatacctat 31126850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 24 - 228
Target Start/End: Original strand, 42758248 - 42758459
Alignment:
Q  24 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaa 123  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||  ||||||||||||||   ||||||||||||||||| ||||| ||||| ||    
T  42758248 tttaacatttgttagaccggttgatttaattgctcctttaaatatcaatgatagtttttataacatggcaattatcaaacaaaataacatggcatatcaa 42758347  T
Q  124 cataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggg 216  Q
    ||||||||| |||||| | |||||||||||||||||||||||| |||||||  |||||||       |||||||||||||| |  |||||||||||||||    
T  42758348 cataaagtaattttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcggg 42758447  T
Q  217 gaaaacctaaac 228  Q
    | ||||| ||||    
T  42758448 ggaaacccaaac 42758459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 39655505 - 39655281
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| ||||||||||||   | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  39655505 tccaacaataagctcactttcacatttgttagagaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 39655406  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||||||||||| | |||| | |||||||||||||||||||  |||||||||||||||       ||||||||||||||     
T  39655405 aataacataacatatcaacataaagtagttttttacatttgagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatac 39655306  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| |||||||||||||    
T  39655305 ccgtgttttgagatcggggaaaacc 39655281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 44252603 - 44252916
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  44252603 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 44252702  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||||||||||| |  ||| ||||||||||||||||||||| ||||||||||||||||       |||| |||||||||     
T  44252703 aataacataacatatcaacataaagtagttttttatatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatac 44252802  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || ||||| || ||||||||||            ||| |||||||||||||| |||||||||||||| ||||  ||||| ||| || || ||||||||||    
T  44252803 ccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttgattcggacgggtaaccacggg 44252902  T
Q  286 tatggatattgttg 299  Q
    ||||||| ||||||    
T  44252903 tatggattttgttg 44252916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 44953667 - 44953443
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  44953667 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44953568  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||||||||||| | |||| |||||||||||| ||||| || ||||||| ||||||||       ||||||||||||||     
T  44953567 aataacataacatatcaacataaagtagttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatac 44953468  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| |||||||||||||    
T  44953467 ccgtgttttgagatcggggaaaacc 44953443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 19111592 - 19111775
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| |||||||||||||||||| ||| ||| |||||||| ||||||||||||||||| ||||||||||||||||   ||||||||||||||    
T  19111592 tccaacaatatgatcactttaacatttgttataccaattgatttagttactcctttaaatatcaatggtagtttttataacacgaaaattatcaaacaaa 19111691  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || |||||||||| |||||||||||| |||||| ||||  | ||||||||||| ||||||   |||||||||| ||| |||||||    
T  19111692 ataacatgacata-taacataaagtaattttctacattttgtacgggtttgggcatgggtttagggtgggtacttatatacccgt 19111775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 299
Target Start/End: Complemental strand, 22536071 - 22535760
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaaaa 107  Q
    |||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||||    
T  22536071 caacaatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 22535972  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | ||||||||||| |||||||| || |||| | ||||  ||||| || || |||||||| |||||||||| ||| |       |||||||||||||||||    
T  22535971 taacatgacatatcaacataaaataattttttacatttaggacgagtatgtgtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatcc 22535872  T
Q  201 atgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggta 287  Q
     ||||||||||| |||||||            ||| |||||||||||||| ||||||||||| || ||||||||||||||| |  |||||||| ||||||    
T  22535871 gtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggcggataaccgcgggta 22535772  T
Q  288 tggatattgttg 299  Q
    ||| | ||||||    
T  22535771 tgggttttgttg 22535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 44172482 - 44172706
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||| | ||||||||||| ||||   ||||||||||||||    
T  44172482 tccaacaatacgctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaa 44172581  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||| |||||||||||| |||       ||||||||||||||     
T  44172582 aataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatac 44172681  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| |||||||||||||    
T  44172682 ccgtgttttgagatcggggaaaacc 44172706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 44179182 - 44179406
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||| | ||||||||||| ||||   ||||||||||||||    
T  44179182 tccaacaatacgctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaa 44179281  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||| |||||||||||| |||       ||||||||||||||     
T  44179282 aataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatac 44179381  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| |||||||||||||    
T  44179382 ccgtgttttgagatcggggaaaacc 44179406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 830866 - 831039
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| |||| ||||||||| ||||||| ||| |||||||| |||||| ||||||||||  |||||||||||| ||  |||||||||||||||    
T  830866 tccagcaatatgctcacgttaacattttttagaccaattgatttagtttctccttaaaatatcaatgatagtttttataagacggcaattatcaaacaaa 830965  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacc 180  Q
    || ||||  ||||||||||||||||| ||||||||||||||||||  ||||||||||||| | |||||||||||    
T  830966 ataacatagcatattaacataaagtaattttctgcattcgggacgaatttgggtatgggttcagggtgggtacc 831039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 30682683 - 30682846
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    |||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||  ||||||||||||||   | ||||||||||||||| ||    
T  30682683 caatatgttcactttaacatttgttagaacgaatgatttaattgctcctttaaatatcaatgatagtttttataacatgaccattatcaaacaaaataac 30682782  T
Q  112 atgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgg 175  Q
    ||||||||| ||||||||||| |||||| ||||| ||||||||||| |||| ||| || |||||    
T  30682783 atgacatatcaacataaagtaattttctacattcaggacgggtttgagtataggttcgaggtgg 30682846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 49579920 - 49580233
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   |||| |||||||||    
T  49579920 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatcatcaaacaa 49580019  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| || |||||||| |||| | |||| |||||||||||| |||||||| || |||||||||||||       ||||||||||||||     
T  49580020 aataacataacatatcaatataaagtaattttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatac 49580119  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || |||||||| ||||||||||            ||| |||||||||||||| |||||||||||||| |||||  |||||||| |  |||||||||||||    
T  49580120 ccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacggg 49580219  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  49580220 tatgggttttgttg 49580233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 52572465 - 52572778
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| | |||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  52572465 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 52572564  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||||||||||||||| |||| | |||| |||||||| ||| |||||| | |||||||||| |||||       ||||||||||||||     
T  52572565 aataacataacatattaacataaagtaattttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatac 52572664  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || |||||||| |||| |||||            ||| |||||||||||||| |||||||||| ||| ||||||||||||||| |  |||||||||||||    
T  52572665 ccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggttcgggcggataaccacggg 52572764  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  52572765 tatgggttttgttg 52572778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 7469997 - 7469697
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| || |   ||||||||||||||||| |||| ||||    
T  7469997 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataacat 7469898  T
Q  119 attaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaa 211  Q
    ||  |||||||||||| || | |||| |||||||||||| |||||||| ||||||||||||||||       |||||||||||||| || ||||| || |    
T  7469897 atccacataaagtagtgttttacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 7469798  T
Q  212 tcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgtt 298  Q
    || ||||||            ||| |||||||||||||| |||||||||||||| ||||| ||||||||| |  || ||||||||||||||| | |||||    
T  7469797 tcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgtt 7469698  T
Q  299 g 299  Q
    |    
T  7469697 g 7469697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 29284192 - 29284377
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||| ||  | ||||||||||| || ||||||||| ||| ||||||||||| ||||   ||||||||||||||    
T  29284192 tccaacaataagctcactttcacatttgttaaacaaaattatttagttgatcttttaaatattaatggtagtttttattaacatgacaattatcaaacaa 29284291  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||||||||||| | |||  ||||||||||||||||||||| |||| ||||||||||| |||||||    
T  29284292 aataacataacatatcaacataaagtagttttttacatctgggacgggtttgggtatgggttcgggctgggtacctatatacccgt 29284377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 183
Target Start/End: Original strand, 29842164 - 29842341
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||| ||||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  29842164 tccaacaatatgctcacttcaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 29842263  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||| |||||||| || ||||||||||| |||| | |||| | ||||||| || |||||||| ||||||||||||||||    
T  29842264 aataacatgacaaatcaacataaagtaattttttacatttgagacgggtatgagtatgggttcggggtgggtacctat 29842341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 39728527 - 39728712
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||  || |||||||||||||  |||||||||| |||| | ||||||||||||||    
T  39728527 tccaacaataagctcactttcacatttgttagacaaaatgatttagttaatcttttaaatatcaatgatagtttttattaacagaacaattatcaaacaa 39728626  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||| |||||||||||| ||| |||||||    
T  39728627 aataacattacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgt 39728712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 20086865 - 20087077
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    ||||||||||||  |||||||||||||||||||  || | ||||||||| |||||||||||||||| |||||||||| |||||   |||||||||| |||    
T  20086865 tccaacaatatgcccactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaagcaa 20086964  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgtt 205  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||||||| || ||| |||| |||||||||||||||| ||||| |    || || ||||    
T  20086965 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgagta-gggttcggggtgggtacctatatacccat----tacccgtgtt 20087059  T
Q  206 ttgaaatcggggaaaacc 223  Q
    ||||||||||||||||||    
T  20087060 ttgaaatcggggaaaacc 20087077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 41937233 - 41937077
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||| || ||| |||||||||  |||| ||||||||||  |||||||||||||||    
T  41937233 tccaacaacatgctcactttaacatttgttagaccgattgatttagttgttcatttcaatatcaatgttagtctttataacacgacaattatcaaacaaa 41937134  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatg 163  Q
    || | ||||||| | |||| |||||||||||||||||| | |||| |||||||||||    
T  41937133 ataatatgacatgtcaacacaaagtagttttctgcatttgagacgagtttgggtatg 41937077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 34025810 - 34026034
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||||| || |||||||||||| ||||  || | ||||||||| |||||||||||||||| ||| ||||||| ||||   ||||||||||||||    
T  34025810 tccaacaatatgctccctttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaa 34025909  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||||||| |||||||| || ||||||||  ||||||       ||||||||||||||     
T  34025910 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatac 34026009  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    |  ||||||||||||||||||||||    
T  34026010 ctgtgttttgaaatcggggaaaacc 34026034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 34154274 - 34154493
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||| |||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  34154274 tccaacaatatgttcactttaatatttgttagacataatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 34154373  T
Q  106 aatgacatgacatattaacataaagt-agttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    |     || |||||| |||||||||| | |||| | |||| ||||||||| ||||||||||| ||||||||||||||||       ||||||||  ||||    
T  34154374 a-----ataacatatcaacataaagtaatttttttacatttgggacgggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcata 34154468  T
Q  198 tccatgttttgaaatcggggaaaac 222  Q
     ||||||||||||||||||||||||    
T  34154469 cccatgttttgaaatcggggaaaac 34154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 6738626 - 6738413
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| |||||||||||| ||||||||  | | ||||| ||| |||||  ||||||||| ||||||||||| ||||   ||||||||||||||    
T  6738626 tccaccaatatgctcactttaacatctgttagacataatgatttaattgatccttccaatatcaatggtagtttttattaacatggcaattatcaaacaa 6738527  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgtt 205  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||||| || |||||| |  ||||||||||||||| |||||||    || || ||||    
T  6738526 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgagtatggatttggggtgggtacctatatacccgt----tacccgtgtt 6738431  T
Q  206 ttgaaatcggggaaaacc 223  Q
    ||||||||||||||||||    
T  6738430 ttgaaatcggggaaaacc 6738413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 10823925 - 10823759
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  10823925 tccaacaataagttcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 10823826  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccgggg 172  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||  ||||||||||||||| |||||    
T  10823825 aataacataacatatcaacataaagtaattttttacatttgggagaggtttgggtatgggttcgggg 10823759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 7 - 183
Target Start/End: Complemental strand, 44107024 - 44106847
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||| ||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  44107024 tccaacaataaactcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44106925  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||| |||| |||||||||||||||||| |||| | |||| |||||||||||| |||||||| |||||| | |||||||    
T  44106924 aataacataacatattaacataaagtaattttttacatttgggacgggtttgagtatgggttcggggtagatacctat 44106847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 44639170 - 44639315
Alignment:
Q  47 atttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattc 145  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||||| |||| |||||| |||||||| || |||| | ||||     
T  44639170 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacattt 44639269  T
Q  146 gggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || |||||||||||||||||| |||||||||||||||| |||||||    
T  44639270 ggaacgggtttgggtatgggttcggggtgggtacctatatacccgt 44639315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 52198013 - 52198196
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaat 108  Q
    ||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   |||||||||||||||||    
T  52198013 aacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaat 52198112  T
Q  109 ga-catgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
     | |||  ||||| ||| ||||||| |||| | |||| || |||||||||||||||||| |||||||||||||||| |||||||    
T  52198113 aaacatagcatatcaacgtaaagtaattttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgt 52198196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 183
Target Start/End: Complemental strand, 17146382 - 17146205
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | | ||||| |||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  17146382 tccaacaataagctgactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 17146283  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||| |||| |||||| ||||||||||| |||| | |||| |||| ||||||| |||||||| |||||||| |||||||    
T  17146282 aataacataacatatcaacataaagtaattttttacatttgggaagggtttgtgtatgggttcggggtggatacctat 17146205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 23580684 - 23580868
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||   ||||||||||||||||| || || | ||||||||| ||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  23580684 tccaacaatatccacactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaa 23580783  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||   || ||||||||||| ||| |||||||||||| |||||||    
T  23580784 aataacat-acatatcaacataaaataattttttacatttgggataagtgtgggtatgggttcggagtgggtacctatatacccgt 23580868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 43582434 - 43582656
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||||||||||||||||||  | | ||||||||| ||| |||||||||||| |||||||||| | |||    |||||||||||||    
T  43582434 tccaacaatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatatcaatggtagtttttatttacatgataattatcaaacaa 43582533  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta-------tttacccgtcccatat 198  Q
    ||| ||||||||||| || |||||||| |||| | |||| ||||||||| ||  ||||||| | |||||||||||||        ||||||||| ||||     
T  43582534 aataacatgacatatcaatataaagtaattttttacatttgggacgggtatgaatatgggttc-gggtgggtacctacatacacgttacccgtctcatac 43582632  T
Q  199 ccatgttttgaaatcggggaaaac 222  Q
    || |||||||||||||||||||||    
T  43582633 ccgtgttttgaaatcggggaaaac 43582656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 23547204 - 23547073
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||| ||  | ||||||||||| |||||||||||| |||  |||||||||| ||||   ||||||||||||||    
T  23547204 tccaacaataagctcactttcacatttgttaaacaaaattatttagttgatcctttaaatataaatgctagtttttattaacatgacaattatcaaacaa 23547105  T
Q  106 aatgacatgacatattaacataaagtagtttt 137  Q
    ||| |||| |||||||||||||||||||||||    
T  23547104 aataacataacatattaacataaagtagtttt 23547073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 125 - 299
Target Start/End: Complemental strand, 23547055 - 23546867
Alignment:
Q  125 ataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcgggg 217  Q
    ||||||||||||| | |||| |||||| |||||||||||||| ||||||||||||||||       |||||||||||||| || ||||| || |||||||    
T  23547055 ataaagtagttttttacatttgggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggg 23546956  T
Q  218 aaa------acctaaacccagtcaaaaaggggaaaacccg-tcaattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||      ||| |||||||||||||| |||||||||||| | ||||| ||||||||||   || ||||||||||||||| | ||||||    
T  23546955 aaaacccatacccaaacccagtcaaaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttg 23546867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 223
Target Start/End: Complemental strand, 23154245 - 23154073
Alignment:
Q  57 tcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtt 155  Q
    |||||||||||||||  ||||||||||| ||||   ||||||||||||||||| |||| |||||| ||||||||||| |||| | |||| ||||  |||     
T  23154245 tcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggataggta 23154147  T
Q  156 tgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| ||| ||||||||||||       |||||||| ||||| || || |||||||||||||||||||    
T  23154146 tgagtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtg-tttgaaatcggggaaaacc 23154073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 23910385 - 23910317
Alignment:
Q  97 atcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatggg 165  Q
    |||||||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||| ||| ||||    
T  23910385 atcaaacaaaataacatgacatatcaacataaagtaattttctacattcgggacgggtttaggtgtggg 23910317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 299
Target Start/End: Complemental strand, 48305757 - 48305560
Alignment:
Q  122 aacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccg-------tcccatatccatgttttgaaatcg 214  Q
    ||||||||||| |||| | |||| || |||||||||||||| ||| |||||||||||||||| ||||||       | ||||| || ||||||||||| |    
T  48305757 aacataaagtaattttttacatttggaacgggtttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattg 48305658  T
Q  215 gggaaaac------------ctaaacccagtcaaaaaggggaaaacccgtca-attgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    ||||||||            | |||||||||||||| ||||||||||||||| |||| ||||||||| | ||| ||||| ||||||||||| ||||||    
T  48305657 gggaaaactcatacccataaccaaacccagtcaaaatggggaaaacccgtcagattgggtttggttcgggtgggtaaccgcgggtatggattttgttg 48305560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 48306765 - 48306657
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaaaat 108  Q
    ||||||| | ||||||||| ||||||||||| || | ||||||||| | ||||||||||||||  ||||||||| |||||   ||||||||||||||| |    
T  48306765 aacaatacgctcactttaatatttgttagacggaatgatttagttgatactttaaatatcaatgatagtttttattaacatgacaattatcaaacaaatt 48306666  T
Q  109 gacatgaca 117  Q
     ||||||||    
T  48306665 aacatgaca 48306657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 55438909 - 55438829
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacac 89  Q
    |||||||||||| | |||||||||||||| | ||||| ||||||||||||||  ||||||| || |||||||| |||||||    
T  55438909 caacaatatgtttattttaacatttgttaaagcgattgatttagttgctcctccaaatatcgatggtagttttaataacac 55438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 30616328 - 30616281
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaaccca 231  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30616328 ttacccgtcccatatccgtgttttgaaatcggggaaaacccaaaccca 30616281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 1337081 - 1337143
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaa 246  Q
    ||||||||||||||  | |||||||||||||| ||||||| |||||||||||||| |||||||    
T  1337081 ttacccgtcccatacacttgttttgaaatcggtgaaaacccaaacccagtcaaaacggggaaa 1337143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 10043378 - 10043282
Alignment:
Q  142 attcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaaccca 231  Q
    |||||||| |||| ||||||||||| |||||||||| | |||       |||||||||||||| ||||||||||||| | ||||||||| |||||||    
T  10043378 attcgggatgggtatgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaaccca 10043282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 39655267 - 39655192
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    ||||||| |||||| |||||||||||||| ||||| ||||||||| |  || ||||||||||||||| | ||||||    
T  39655267 aaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 39655192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 39728765 - 39728840
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||| ||||| |||||  |||||||| || || ||||||||||||||| | ||||||    
T  39728765 aaacccagtcaaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttg 39728840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 44953429 - 44953354
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||    || |||||||||||||| || ||||||    
T  44953429 aaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtatgaattttgttg 44953354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 54317238 - 54317313
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| |||||  |||||||| |  || ||||||||| ||||||| ||||||    
T  54317238 aaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcgggtaaccacggatatggattttgttg 54317313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 10371273 - 10371223
Alignment:
Q  219 aaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    ||||| |||||||||||||| |||||||||||||| ||||| |||||||||    
T  10371273 aaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttc 10371223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 30904912 - 30904870
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||    
T  30904912 cattcgagacggatttgggtatgggttcggggtgggtacctat 30904870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 4016032 - 4015963
Alignment:
Q  231 agtcaaaaaggggaaaacccgtcaa-ttgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||| ||| |||||||||||| |||||||| |||| | ||| ||||||||||||||| | ||||||    
T  4016032 agtcaaaacgggaaaaacccgtcaaattgagtttcgttcgggtgggtaaccacgggtatgggttttgttg 4015963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 29284430 - 29284495
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    |||||||||||||| || ||||||||||| ||||| ||||||||| |  || ||||||||||||||    
T  29284430 aaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatg 29284495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 1772608 - 1772540
Alignment:
Q  52 gttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatat 120  Q
    ||||||||||||| ||||||||  |||| ||||| ||    |||||||||||||||| |||||||||||    
T  1772608 gttgctcctttaagtatcaataaaagttcttatatcatgataattatcaaacaaaataacatgacatat 1772540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 3385854 - 3385806
Alignment:
Q  221 acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    |||||||||||||||||  |||||||||||||| ||||| |||||||||    
T  3385854 acctaaacccagtcaaagcggggaaaacccgtcgaattgggtttggttc 3385806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 12369103 - 12369163
Alignment:
Q  240 ggggaaaacccgtcaa-ttgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||| ||||||| ||||||||||||| | || |||||||||||||||| | ||||||    
T  12369103 ggggaaaatccgtcaaattgagtttggttcgggtgaataaccacgggtatgggttttgttg 12369163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 14208260 - 14208363
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaat 108  Q
    ||||||||| |||| ||||||||||  | ||| || | |||| ||||||||||||||||||||| |   |||||||||||   |||||||||||| ||||    
T  14208260 caacaatattttcattttaacatttccttgactgaatgattttgttgctcctttaaatatcaat-gacatttttataacatgacaattatcaaaccaaat 14208358  T
Q  109 gacat 113  Q
     ||||    
T  14208359 aacat 14208363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 42243481 - 42243533
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggat 276  Q
    |||||||||||||  |||||||||||||| ||||| |||||||||||| ||||    
T  42243481 aaacccagtcaaaccggggaaaacccgtcaaattgggtttggttcagacggat 42243533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 2e-83; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 14505943 - 14506233
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||  |||||||||||||||  |||||||||||||||    
T  14505943 tccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataacacgacaattatcaaacaaa 14506042  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta-------tttacccgtcccatatc 199  Q
    || || |||||||| |||| |||||||||||||||||| |||||||||||  |||||||| |||||||||||||||        |||||||||||||| |    
T  14506043 ataacgtgacatatcaacacaaagtagttttctgcatttgggacgggtttaagtatgggttcggggtgggtacctaaatacttgttacccgtcccatacc 14506142  T
Q  200 catgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
      |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |||| ||||| ||||||||||||||    
T  14506143 tgtgttttgaaatcggggaaaacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttcgttcggatggttaaccacgggtatg 14506233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 24603082 - 24602787
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||    
T  24603082 caatatgctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagtttttataacacgtcaattatcaaacaaaataac 24602983  T
Q  112 atgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgt 204  Q
    ||| || || ||||||||||| |||||| |||||| || |||||||||||||||| ||||||||||| ||||       ||||||||| |||| ||||||    
T  24602982 atggcacatcaacataaagtaattttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgt 24602883  T
Q  205 tttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    ||||||||| ||||||||| ||||||||||||||  ||||||| ||||| |||||||||| |||| | ||| |||||||| |||||||| ||||||    
T  24602882 tttgaaatctgggaaaacccaaacccagtcaaaacagggaaaaaccgtcaaattgagtttcgttcgggtgggtaaccacgtgtatggattttgttg 24602787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 14032413 - 14032579
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  14032413 tccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaacaaa 14032512  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggt 173  Q
    || ||||||||||| ||||||||||| |||| |||||| ||||||||||||||||||||| ||||||    
T  14032513 ataacatgacatatcaacataaagtaattttatgcatttgggacgggtttgggtatgggttcggggt 14032579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 30816114 - 30816299
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||  |||||||| ||||||    
T  30816114 tccaacaatatgtacactttaacatttgttagaccgattgatttaggtgctcctttaaatgtcaatggtagtttttataacacggcaattatccaacaaa 30816213  T
Q  107 atgacatgacatattaacataaagtag---ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttaccc 189  Q
    || |||| |||||| ||||||||||||   |||| |||||||||||||||||||| ||||||| |||||||||| ||||| |||||    
T  30816214 ataacatcacatatcaacataaagtagtttttttttgcattcgggacgggtttggatatgggttcggggtgggttcctatataccc 30816299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 27534540 - 27534853
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| ||||||||| |||||||||||||  | ||||||||||| | ||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  27534540 tccaacaataagttcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 27534639  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||||||||||| | |||| ||||||||||||||||||| | ||||||||||||||||       ||||||||||||||     
T  27534640 aataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatac 27534739  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || ||||| || ||||||||||            ||| ||||||| |||||| |||||||||||||| ||||||||||||||| || || ||||||||||    
T  27534740 ccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggttcggacggttaaccacggg 27534839  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  27534840 tatgggttttgttg 27534853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 10188305 - 10187999
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   |||||||| |||||    
T  10188305 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcgaacaa 10188206  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgtt 205  Q
    ||| |||| | |||| |||||||| || |||| | |||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||| || ||||    
T  10188205 aataacataatatatcaacataaaataattttttacatttgggatgggtttgggtatgggttcggggtgggtacctatatacccgtcccatacccgtgtt 10188106  T
Q  206 ttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggat 292  Q
    |||| ||||||||||            ||| |||||||||||||| |||||||||||||| ||||| ||||||||| |  || ||||||||||||||| |    
T  10188105 ttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggt 10188006  T
Q  293 attgttg 299  Q
     ||||||    
T  10188005 tttgttg 10187999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 12678324 - 12678103
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||  || ||||||||||||  |||||||||||||||    
T  12678324 tccagcaatatgctcactttaac-tttattagaccgattgatttagttgctcctttaaatatcaatgataatttttataacacgacaattatcaaacaaa 12678226  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta-------tttacccgtcccatatc 199  Q
    || ||||||||||| || ||||| || ||||||  ||||||||||||||||||||||||| | |||||||||||||       ||||||||||||||| |    
T  12678225 ataacatgacatatcaatataaaataattttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacc 12678126  T
Q  200 catgttttgaaatcggggaaaac 222  Q
      ||| |||||||||||||||||    
T  12678125 tgtgtcttgaaatcggggaaaac 12678103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 32853700 - 32854013
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| || ||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  32853700 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatggcaattatcaaacaa 32853799  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||     
T  32853800 aataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatac 32853899  T
Q  199 ccatgttttgaaatcggggaaaac------------ctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || |||||||| ||||||||||||            | |||||||||||||| || ||||||||||| ||||| ||||||||| |  |||||||||||||    
T  32853900 ccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcggtcggataaccacggg 32853999  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  32854000 tatgggttttgttg 32854013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 255
Target Start/End: Complemental strand, 7394118 - 7393863
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  7394118 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 7394019  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || | |||| |||  |||||||| ||  ||| ||||||| ||| | ||||| |||||||| |||||||| |||||||       ||| ||||| | ||      
T  7394018 ataatatgatataccaacataaaataaatttatgcattcaggatgagtttgagtatgggttcggggtggatacctatatacccattatccgtctcttact 7393919  T
Q  200 catgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    | |||||||||||||||||||| | ||||||| |||||| |||||||| |||||||    
T  7393918 cgtgttttgaaatcggggaaaatccaaacccaatcaaaatggggaaaatccgtcaa 7393863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 2367182 - 2367406
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | |||||||||||||||||||||  | | ||||||||  |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  2367182 tccaacaataagctcactttaacatttgttagacaaaatgatttagtttatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 2367281  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| ||||||  |||||||||| |||| | |||| ||||||||||||||||||||| |||||||||||| |||       ||||||||||||||     
T  2367282 aataacataacatatccacataaagtaattttttccatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatac 2367381  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| |||||||||||||    
T  2367382 ccgtgttttgagatcggggaaaacc 2367406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 3484155 - 3483970
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| || |   ||||||| ||||||    
T  3484155 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatgaaacaa 3484056  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| ||||||  ||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||| |||||||    
T  3484055 aataacataacatatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgt 3483970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 24225569 - 24225776
Alignment:
Q  22 actttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatat 120  Q
    ||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||||| |||| ||||||    
T  24225569 actttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatat 24225668  T
Q  121 taacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatc 213  Q
     |||||||| || |||| | |||| |||||||||||||| |||||| ||||||||||||||||       ||||||||||||||||| |||||||| |||    
T  24225669 caacataaaataattttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatc 24225768  T
Q  214 ggggaaaa 221  Q
    ||||||||    
T  24225769 ggggaaaa 24225776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 47 - 223
Target Start/End: Original strand, 27738668 - 27738852
Alignment:
Q  47 atttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattc 145  Q
    |||||||||||||||||||||||||| ||||||||||| ||||   ||||||||| ||||||| |||| |||||| ||||||||||| |||| | ||||     
T  27738668 atttagttgctcctttaaatatcaatggtagtttttattaacatgacaattatcatacaaaataacataacatatcaacataaagtaattttttacattt 27738767  T
Q  146 gggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacc 223  Q
    ||||||||||||||||||||| |||||||||||| |||       |||||||||||||| || ||||||||||||||||||||||    
T  27738768 gggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacc 27738852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 14254820 - 14254991
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    ||||||||| |||||||||||| ||||||||| | ||||| | ||||||||||||||||||  |||||||||||||||||||| | ||||||||||| ||    
T  14254820 caatatgttgactttaacatttattagaccgaatgatttaatcgctcctttaaatatcaatgatagtttttataacacatcaaatttcaaacaaaataac 14254919  T
Q  112 atgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||||||||| ||||||||||  || | |||||| ||||||  ||||||||||||| |  |||||||||||||    
T  14254920 atgacatatcaacataaagttattatttgcatttgggacgaatttgggtatgggttcatggtgggtacctat 14254991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 93 - 255
Target Start/End: Original strand, 32053031 - 32053206
Alignment:
Q  93 aattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------tt 185  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||| | ||||  ||||||||||||||||||||  ||||||||||| |||       ||    
T  32053031 aattatcaaacaaaataacatgacatatcaacataaagtatttttttacattttggacgggtttgggtatgggtttggggtgggtacatatatacccgtt 32053130  T
Q  186 acccgtcccatatccatgttttgaaatcggggaaa------acctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    |||||||||||||||||||||||||||||||||||      ||| |||||||||||||| ||||||||||||||||    
T  32053131 acccgtcccatatccatgttttgaaatcggggaaaacccatacccaaacccagtcaaaacggggaaaacccgtcaa 32053206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 5863602 - 5863391
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacat 118  Q
    ||||||| |||||| ||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||    |||||||||||||||| |||| ||||    
T  5863602 tcactttcacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacataacat 5863503  T
Q  119 attaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaa 211  Q
    || |||||||| || |||| | |||| ||||||||||||||||||||| || |||||||| ||||       |||||||||||||| || ||||||||||    
T  5863502 atcaacataaaatatttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaa 5863403  T
Q  212 tcggggaaaacc 223  Q
    ||||||||||||    
T  5863402 tcggggaaaacc 5863391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 10142750 - 10142565
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  10142750 tccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 10142651  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||| |||||||||||| || |||||||||||||||| |||||||    
T  10142650 aataacataacatatcaacataaaataattttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgt 10142565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 47 - 227
Target Start/End: Original strand, 11762342 - 11762529
Alignment:
Q  47 atttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcg 146  Q
    |||||||||||||| ||||||||||| ||||||||||||||||  |||||||  |||||||| ||||| ||||| ||||||||||| |||||| |||| |    
T  11762342 atttagttgctcctataaatatcaatggtagtttttataacacgacaattatataacaaaataacatggcatatcaacataaagtaattttctacatttg 11762441  T
Q  147 ggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaa 227  Q
    ||| ||||||||||||| || ||||||||  ||||||       |||||||||||||| || ||||| ||||||||| ||||||||||    
T  11762442 ggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaatcgggaaaaacctaaa 11762529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 12141254 - 12141427
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| || |   ||||||||||||||||| |||| || |    
T  12141254 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgttagtttttattaagatgacaattatcaaacaaaataacataacgt 12141353  T
Q  119 attaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtc 192  Q
    || |||||||| || |||| | |||| ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  12141354 atcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtc 12141427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 14411064 - 14410954
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||  | |||||||||||||  |||||||||||||||    
T  14411064 tccagcaatatgctcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgatggtttttataacacgacaattatcaaacaaa 14410965  T
Q  107 atgacatgaca 117  Q
    || ||| ||||    
T  14410964 ataacacgaca 14410954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 14245109 - 14245214
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    |||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||| ||| ||||||||||||||||  ||||| ||||||||||| ||    
T  14245109 caatatgttcactttaacatttattagaccgaatgatttagtcgctcctttaaatattaatggtagtttttataacacgacaattttcaaacaaaataac 14245208  T
Q  112 atgaca 117  Q
    ||||||    
T  14245209 atgaca 14245214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 12309441 - 12309610
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgaca 112  Q
    |||||||| |||||||||||||||||||  | | ||||| |||| |||||||||||||||  ||||      || |   ||||||||||||||||| |||    
T  12309441 aatatgtttactttaacatttgttagacgaaatgatttaattgcccctttaaatatcaatgatagt------aatatgacaattatcaaacaaaataaca 12309534  T
Q  113 tgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    |||||||| ||||||||||| |||| | |||| ||||||||||||||||| ||| |||||||||||| ||| ||||    
T  12309535 tgacatatcaacataaagtaattttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacc 12309610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 32532500 - 32532620
Alignment:
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccat 202  Q
    ||||||||||| ||||||||||| |||| | |||| ||||||||| || |||||||| ||||||||||||||||       |||||||||||||| || |    
T  32532500 acatgacatatcaacataaagtaattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgt 32532599  T
Q  203 gttttgaaatcggggaaaacc 223  Q
    |||||||||||||||||||||    
T  32532600 gttttgaaatcggggaaaacc 32532620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 13769056 - 13769160
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaa 226  Q
    |||||| ||||| |||||||||||| ||||||| | ||||||||||||||       |||||||||||||| |||||||||||| |||||||||||| ||    
T  13769056 ttttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttttgaagtcggggaaaaccgaa 13769155  T
Q  227 accca 231  Q
    |||||    
T  13769156 accca 13769160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 14410946 - 14410832
Alignment:
Q  147 ggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaa 239  Q
    |||||||||||||||||||| ||||||||||||||||       |||||||||||||| || |||||||||||| ||||||||  ||||| |||| ||||    
T  14410946 ggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaacctagtc-aaaa 14410848  T
Q  240 ggggaaaacccgtcaa 255  Q
     ||||||| |||||||    
T  14410847 cgggaaaatccgtcaa 14410832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 32532420 - 32532497
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    ||||| |||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||| | |||||||||||    
T  32532420 tccaataatatgctcactttaacatttgttagacggaatgatttagttggtcctttaaatatcattggtagtttttat 32532497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 28079780 - 28079696
Alignment:
Q  154 tttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaaccca 231  Q
    ||||||||||||| ||||||||||||||||       ||||||||||| || ||||||||||||||||||||||||| |||||||    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaaccca 28079696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 31496528 - 31496603
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| ||||||||||||||  || || ||||||||||||||| | ||||||    
T  31496528 aaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgttg 31496603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 31501914 - 31501989
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| ||||||||||||||  || || ||||||||||||||| | ||||||    
T  31501914 aaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgttg 31501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 9402629 - 9402714
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    ||||||||||  || ||||||||||||||||||||||||| ||| |||||||||  |||||||| || || ||||| |||||||||    
T  9402629 ttacccgtcctgtacccatgttttgaaatcggggaaaacccaaatccagtcaaagcggggaaaatccatcaaattgggtttggttc 9402714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 30986347 - 30986422
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||| |  || ||||||||||||||| | ||||||    
T  30986347 aaactcagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttg 30986422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 18908934 - 18908978
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaac 228  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||    
T  18908934 ttacccgtcccatatccgtattttgaaatcggggaaaacccaaac 18908978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 5863377 - 5863302
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| |   | ||||||||||||||| | ||||||    
T  5863377 aaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttg 5863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 15498315 - 15498404
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacc 223  Q
    |||| ||||||||||||||| ||||| |||| |||||||||||       ||||| ||| |||| || ||||||||||||||||||||||    
T  15498315 catttgggacgggtttgggtgtgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacc 15498404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 29199932 - 29199861
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    ||||||||||| || || | |||||||||||||||||| | ||||||| |||||  |||||||| |||||||    
T  29199932 ttacccgtcccgtacccgtattttgaaatcggggaaaatccaaacccaatcaaatcggggaaaatccgtcaa 29199861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 8320824 - 8320771
Alignment:
Q  202 tgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    ||||||||||| |||||||||| ||||| |||||||  |||||||| |||||||    
T  8320824 tgttttgaaattggggaaaacccaaacctagtcaaagcggggaaaatccgtcaa 8320771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 29341240 - 29341289
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    |||||| ||||||||||||||||||||||| ||  ||| |||||||||||    
T  29341240 ttttctacattcgggacgggtttgggtatgagtttgggatgggtacctat 29341289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 9442527 - 9442567
Alignment:
Q  229 ccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  9442527 ccagtcaaaacggggaaaacccgtcaaattgagtttggttc 9442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 12141479 - 12141523
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||    
T  12141479 aaacccagtcaaaacggggaaaacccgtcaaattgaatttggttc 12141523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 7e-80; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 17469112 - 17469412
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||||||||||||| |||| ||||||| ||| |||||||| ||||||||||||||||| |||| ||||||||||   |||||||||||||||    
T  17469112 tccaacaatatgttcactttaaaattttttagacccattgatttagtttctcctttaaatatcaatggtagcttttataacaaggcaattatcaaacaaa 17469211  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||  |||||||||||||||       |||||||||||||| |    
T  17469212 ataacatggcatatcaacataaagtagttttctgcagttgggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 17469311  T
Q  200 catgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgtt 298  Q
    | |||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||| | ||| |||| |||||||||| | |||||    
T  17469312 cgtgttttgaaatcggggaaaacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggtgggtaactacgggtatgggttttgtt 17469411  T
Q  299 g 299  Q
    |    
T  17469412 g 17469412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 24568796 - 24568978
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24568796 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 24568895  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccg 190  Q
    || || |||||||| |||||||||||||||||| |||||||||||| |||| |||||||| |||||||| ||||||| ||||||    
T  24568896 ataac-tgacatatcaacataaagtagttttctccattcgggacggatttgagtatgggttcggggtggatacctatatacccg 24568978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 1012474 - 1012703
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  1012474 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatggtactttttataacacagcaattatcaaacaaa 1012573  T
Q  107 atgacatgacatattaacataaagtag--ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    || ||||| ||||| ||||||||||||  |||| ||||||||||||| |||||||||||||| ||||||||||||||||       ||||||||||||||    
T  1012574 ataacatggcatatcaacataaagtagttttttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccata 1012673  T
Q  198 tccatgttttgaaatcggggaaaacctaaac 228  Q
      |||||||| ||||||||||||||| ||||    
T  1012674 ctcatgtttt-aaatcggggaaaacccaaac 1012703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 43113857 - 43113634
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||  |||||||||||||||  |||||||| ||||||    
T  43113857 tccaacactatattcactttaacatttgttataccgattgatttagttgctccttcaaatatcaatgatagtttttataacacgacaattatctaacaaa 43113758  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || |||| |||||| ||||| ||||||||||||||||||| ||||| |||||||||| || ||||||||||||||||       |||||||||||||  |    
T  43113757 ataacataacatatcaacatgaagtagttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcc 43113658  T
Q  200 catgttttgaaatcggggaaaacc 223  Q
    | ||||||||||||||| ||||||    
T  43113657 cgtgttttgaaatcgggaaaaacc 43113634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 34139304 - 34139485
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  || ||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  34139304 tccaacaatatgttcactttaacatttgttagaccgattgatttgtttactcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 34139403  T
Q  107 atgacatgacatattaacataaagt-agttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    || |||||   ||| |||||||||| | |||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  34139404 ataacatggtctatcaacataaagtaatttttttgcattcgggacgggtttgggtat-ggttcggggtgggtacctatatacc 34139485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 45235921 - 45236144
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||    |||||||||||||    
T  45235921 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 45236020  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||||||| ||| ||||||| ||||||||||||||||       ||||||||||||||     
T  45236021 aataacataacatatcaacataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatac 45236120  T
Q  199 ccatgttttgaaatcggggaaaac 222  Q
    || |||||||||||| ||||||||    
T  45236121 ccgtgttttgaaatcagggaaaac 45236144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 20399448 - 20399680
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattat-caaacaa 105  Q
    |||| ||| ||| |||||||||||||||||||||||||| |||| |||| ||||||||||||||||  |||||||||||||||  |||||||  ||| ||    
T  20399448 tccagcaagatgctcactttaacatttgttagaccgattgatttggttggtcctttaaatatcaatgctagtttttataacacgacaattatataaaaaa 20399547  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||||  |||| |||||||| || |||| ||||||||||||||||||||| |||||| ||||||||||| ||||       ||||||||||||||     
T  20399548 aataacatggtatatcaacataaaataattttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatac 20399647  T
Q  199 ccatgttttgaaatcggggaaaacctaaaccca 231  Q
    || |||||||||||||| ||||||| |||||||    
T  20399648 ccgtgttttgaaatcggagaaaacccaaaccca 20399680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 32302916 - 32303230
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  32302916 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 32303015  T
Q  106 aatgacatgacatattaacataaagtagttttctg-cattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| |||||| |||||||| ||||||| |  |||| ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||    
T  32303016 aataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccata 32303115  T
Q  198 tccatgttttgaaatcggggaaaaccta------------aacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgg 284  Q
     || ||||| || ||||||||||||| |            ||||||||||||| |||||||||||||| ||||| ||||| ||| |  || |||||||||    
T  32303116 cccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgtttcgggcgggtaaccacgg 32303215  T
Q  285 gtatggatattgttg 299  Q
    |||||| | ||||||    
T  32303216 gtatgggttttgttg 32303230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 24927805 - 24927990
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| |  |||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| || |   ||||||||||||||    
T  24927805 tccaacaataagcccactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaa 24927904  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| ||||||  ||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||| |||||||    
T  24927905 aataacataacatatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgt 24927990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 24870242 - 24870071
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacata 119  Q
    ||||||||||||||||||||| || | ||||||||| |||||||||||||||| ||||||||  |||||   ||||||||||||||| | ||||||||||    
T  24870242 tcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagttttattaacatgacaattatcaaacaaattaacatgacata 24870143  T
Q  120 ttaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    | ||||||||||| |||| | |||| ||||||||||| ||||||||  |||||||||||||||| |||||||    
T  24870142 tcaacataaagtaattttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgt 24870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 29109049 - 29108830
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatga 110  Q
    ||||||| |||||||||||||||||||||  | | ||||| ||| ||||| |||||||||| ||||||||||| ||||   ||||||||||||||||| |    
T  29109049 caatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataa 29108950  T
Q  111 catgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatg 203  Q
     ||||||||| ||||||||||| |||| | |||| ||||||||| ||||||||||| |||||||||||| |||       |||||||||||||| |||||    
T  29108949 tatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatg 29108850  T
Q  204 ttttgaaatcggggaaaacc 223  Q
    |||| |||||||| ||||||    
T  29108849 ttttaaaatcgggaaaaacc 29108830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 36132147 - 36131848
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| ||| ||||||||||||| |||||||| ||||| ||||| |||||||| | ||| ||| ||||||||||||  |||||||||||||||    
T  36132147 tccagcaatatgctcattttaacatttgtttgaccgattaatttaattgcttctttaaattttaatggtaatttttataacacggcaattatcaaacaaa 36132048  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacct-------atttacccgtcccatatc 199  Q
    || |||||||||| ||||||||| ||  |||||||||||||||||| |||| ||||| || |||||||| |||||        ||||||| |||||||      
T  36132047 ataacatgacata-taacataaaataactttctgcattcgggacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatact 36131949  T
Q  200 catgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgtt 298  Q
    | ||||||||||| |||||||||  ||||||| |||||| ||  |||| || || ||||  ||||||||| | ||| ||||||||| |||| || |||||    
T  36131948 cgtgttttgaaataggggaaaactcaaacccaatcaaaacggaaaaaatccatcaaattaggtttggttcgggtgggtaaccacggatatgaattttgtt 36131849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 255
Target Start/End: Original strand, 14186205 - 14186432
Alignment:
Q  31 tttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaacataaag 130  Q
    ||||||||||| ||| |||||||| ||||||||||||||||| |||||||    |||||  |  |||||||||||||| ||||| ||||||||||||||     
T  14186205 tttgttagaccaattgatttagttactcctttaaatatcaatggtagttt----aacacgactgttatcaaacaaaataacatggcatattaacataaat 14186300  T
Q  131 tagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacc 223  Q
    || |||||| ||||| |||||||||||||||||||| | ||||| ||||||||       |||||| ||||||| || ||||||||||||| | |||||     
T  14186301 taattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaaact 14186400  T
Q  224 taaacccagtcaaaaaggggaaaacccgtcaa 255  Q
     ||||||| |||||| || |||||||||||||    
T  14186401 caaacccaatcaaaacggagaaaacccgtcaa 14186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 28977346 - 28977186
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| ||||||||| |||||||||||||  | ||||||||||| || ||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  28977346 tccaacaataagttcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 28977247  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| |||| |||||| |||||||||||||||| | |||| ||||||||||||||| |||||    
T  28977246 aataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtgtgggt 28977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 27932269 - 27932493
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| |||| || |||||||||||||||||||||  | | ||||| ||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  27932269 tccaccaatgtgctcactttaacatttgttagacgtaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 27932368  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||||| | || |||||||| ||||||||||||||||       |||| |||||||||     
T  27932369 aataacatgacatatcaacataaaataattttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatac 27932468  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||||||||||    
T  27932469 ccgtgttttgaaatcggggaaaacc 27932493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 35215364 - 35215474
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatg 109  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||  |||||||||||||||||     
T  35215364 aacaatatgttcactttaacatttgttagaccgattgatttagttgctccattaaatatcaagggtagtttttataacacgacaattatcaaacaaaata 35215463  T
Q  110 acatgacatat 120  Q
    ||||| |||||    
T  35215464 acatggcatat 35215474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 1063365 - 1063587
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaa 107  Q
    |||||||| ||||||||||||||||||||||| || | ||||||||| || ||||||||||||| ||| ||||||| ||||   ||||||||||||||||    
T  1063365 caacaatacgttcactttaacatttgttagacggaatgatttagttgatcgtttaaatatcaatggtaatttttatcaacatgacaattatcaaacaaaa 1063464  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | ||| ||||||| ||||||||||| |||| | || | |||| || |||||||||| || |||||||||||| |||       ||| |||||||||| ||    
T  1063465 taacaagacatatcaacataaagtaattttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccataccc 1063564  T
Q  201 atgttttgaaatcggggaaaacc 223  Q
     ||||||||||||||| ||||||    
T  1063565 gtgttttgaaatcgggaaaaacc 1063587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 2076066 - 2075907
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  2076066 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 2075967  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatggg 165  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||    
T  2075966 aataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatggg 2075907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 182
Target Start/End: Original strand, 34776945 - 34777098
Alignment:
Q  30 atttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataa 128  Q
    |||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||||| |||| |||||| |||||||    
T  34776945 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 34777044  T
Q  129 agtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta 182  Q
    | || |||| | |||| |||| || ||||||||||||| |||||||||||||||    
T  34777045 aataattttttacatttgggatggatttgggtatgggttcggggtgggtaccta 34777098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 4230951 - 4230791
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  4230951 tccaacaataagctcacttttacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 4230852  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| |||| |  ||| ||||||||||| |||| | |||| |||||||||||||||||||||    
T  4230851 aataacataatgtatcaacataaagtaattttttacatttgggacgggtttgggtatgggt 4230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 29089567 - 29089672
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||||  ||||||| ||||||||  ||||||||||||||    
T  29089567 tccaacaatatgtttactttaa-atttgttagacccattaatttagttgctcctttaaatatcaatgatagttttaataacacaataattatcaaacaaa 29089665  T
Q  107 atgacat 113  Q
    || ||||    
T  29089666 ataacat 29089672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 34021341 - 34021509
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgaca 112  Q
    |||||| ||||||||||||||||||||   ||| |||| ||||||||||||||||||||||||||||||||||  |   ||||||||||||||||| |||    
T  34021341 aatatgctcactttaacatttgttagattaattgatttcgttgctcctttaaatatcaatagtagtttttatataatgacaattatcaaacaaaataaca 34021440  T
Q  113 tgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    | |||||| |||||||| |  |||||||||||| ||||| || || |||| |||  |||||| ||||||||    
T  34021441 t-acatatcaacataaa-tgattttctgcattcaggacgagtctgtgtattggtttggggtgtgtacctat 34021509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 17220573 - 17220726
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||| ||||||| |||||||||||||||||||||  | | ||||| ||| ||||| |||||||||| |||||||||| |||||   ||||||||||||||    
T  17220573 tccaccaatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaa 17220672  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttggg 159  Q
    ||| ||||||||||| ||||||||||| | || | |||| ||||||||| ||||    
T  17220673 aataacatgacatatcaacataaagtaatcttttacatttgggacgggtatggg 17220726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 11255236 - 11255058
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||    |  |||||||||| ||| |   ||||||||||||||    
T  11255236 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat---gacggtagtttttattaatatgacaattatcaaacaa 11255140  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    ||| |||| |||||| |||| |||||| |||| | |||| ||||||||| ||||||||||| ||  |||||||||||| ||||    
T  11255139 aataacat-acatatcaacacaaagtaattttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacc 11255058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 39445799 - 39445584
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||| ||| | | |||||||||||| |||||||||| |||||   ||||||||||||||    
T  39445799 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcaatggtagtttttattaacatgacaattatcaaacaa 39445701  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||||||||||  |||        |||| | |||| ||||||||| |||||||| || ||||||||||||||||       ||||| ||||||||     
T  39445700 aataacatgacatatctaca--------ttttttacatttgggacgggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatac 39445609  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||| ||||||    
T  39445608 ccgtgttttgaaatcgggaaaaacc 39445584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 9642398 - 9642327
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  9642398 ttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaagcggggaaaacccgtcaa 9642327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 40248579 - 40248502
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    |||||||||||  ||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||||    
T  40248579 tccaacaatattctcactttaacatttgttagactgaatgatttagttgatcctttaaatatcaatggtagtttttat 40248502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 40248499 - 40248371
Alignment:
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccat 202  Q
    ||||||||||| ||||||||||| |||| | |||| ||||||| | ||||||||||| |||| |||||||||||       ||| ||||| |||| || |    
T  40248499 acatgacatatcaacataaagtaattttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgt 40248400  T
Q  203 gttttgaaatcggggaaaacctaaaccca 231  Q
    |||||||||||||||||||| || |||||    
T  40248399 gttttgaaatcggggaaaacatataccca 40248371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 5700347 - 5700468
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagt 233  Q
    ||||||||| || ||||||||||||| || |||||||| ||||       ||||| ||| |||| |  ||||||||||||||| ||||| ||||||||||    
T  5700347 cattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgttttgaaatcgggaaaaacttaaacccagt 5700446  T
Q  234 caaaaaggggaaaacccgtcaa 255  Q
    ||||| ||  ||||||||||||    
T  5700447 caaaacggaaaaaacccgtcaa 5700468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 30481518 - 30481476
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  30481518 cattcgggacgagtttgggtatgggttcggggtgggtacctat 30481476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 4230724 - 4230649
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| |  || |||||||  |||||||| ||||||    
T  4230724 aaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacatgtatggattttgttg 4230649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 24928043 - 24928118
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| |  || ||||| ||||||||| | ||||||    
T  24928043 aaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttg 24928118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 31325125 - 31325197
Alignment:
Q  11 acaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    |||||| | ||||||| |||||||||||||  | | ||||||||| || ||||||||||||| |||||||||||    
T  31325125 acaataagctcactttcacatttgttagacaaaatgatttagttgatc-tttaaatatcaatggtagtttttat 31325197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 9476117 - 9476073
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggta 178  Q
    |||||| ||||||||| |||||||||||||||| || ||||||||    
T  9476117 ttttctacattcgggatgggtttgggtatgggttcgaggtgggta 9476073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 27932507 - 27932551
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||    
T  27932507 aaacccagtcaaaacggggaaaacccgtcaaattgggtttggttc 27932551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 33250 - 33481
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  33250 tccaacaatatgtttactttaacaattgttagaccgattgatttagttgttcctttaaatatcaatcgtagtttttataacacaacaattaccaaacaaa 33349  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||       |||||||||||||| |    
T  33350 ataacatggcatgtcaacataaagtagttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacc 33449  T
Q  200 catgttttgaaatcggggaaaacctaaaccca 231  Q
    | |||||||||||||||||||||| |||||||    
T  33450 cgtgttttgaaatcggggaaaacccaaaccca 33481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 3e-70; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 12447238 - 12447537
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||  ||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  12447238 tccaacaatatattcactttaacatttgttagatcgattgatttaactgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 12447337  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||| ||||||||||||||||       ||||| |||||||| |    
T  12447338 ataacatgacatattaacataaagtagttttctatatttgggacgggtttgggtataggttcggggtgggtacctatatacccattacctgtcccatacc 12447437  T
Q  200 catgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgtt 298  Q
      ||||||  ||||  |||||||| |||||||||||||| |||| ||| ||||| ||||| ||||||||| | ||| ||||||||||||||| | |||||    
T  12447438 tgtgttttacaatcaaggaaaacccaaacccagtcaaaatgggg-aaatccgtcaaattgggtttggttcgggtgggtaaccacgggtatgggttttgtt 12447536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 255
Target Start/End: Complemental strand, 38006701 - 38006446
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||  ||||||| |||||||||| ||| |||||||||||||||||||||||||| || |||||||||| ||  | |||||||||||||    
T  38006701 tccaacaatatgctcgttttaacaattgttagaccaattgatttagttgctcctttaaatatcaatggtggtttttataatacgactattatcaaacaaa 38006602  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || |||||||||||||||||||| || |||||  |||||||||||| ||||||||||||| ||||||||||||||||       |||| ||||||||| |    
T  38006601 ataacatgacatattaacataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacc 38006502  T
Q  200 catgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    | | ||||||||| |||||||||| |||||||||||||| || |||||||||||||    
T  38006501 cgtattttgaaattggggaaaacccaaacccagtcaaaatggagaaaacccgtcaa 38006446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 2412958 - 2412774
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  2412958 tccaacaatatgctcactttaatatttgttagaccgattaatttagttgctcctttaaatatcaattgtagtttttatgacacaacaattatcaaacaaa 2412859  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || ||||||||||| || |||||||| |||||||||| ||||||| |||||||||| ||| | || ||||||| ||| |||||||    
T  2412858 ataacatgacatatcaatataaagtaattttctgcatacgggacgagtttgggtattggttcaggatgggtacatatatacccgt 2412774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 35194221 - 35194037
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| |||||||||||||||||||||| ||||||| ||| ||||||||  | |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  35194221 tccagcaatatgttcactttaacattttttagaccaattgatttagtttattctttaaatatcaatggtagtttttataacacagcaattatcaaacaaa 35194122  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || ||||  ||||||||||||||||| |||||| ||||||||||||||||| ||||| ||  ||||||||||||||| |||||||    
T  35194121 ataacatagcatattaacataaagtaattttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgt 35194037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 2985008 - 2985251
Alignment:
Q  11 acaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatga 110  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||| |    
T  2985008 acaatatgctcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaataaaataa 2985107  T
Q  111 catgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatg 203  Q
    |||||||||| || ||||| || ||||||  ||||| ||| | ||||||||||| | |||| || ||||||||       |||||||||||| | |||||    
T  2985108 catgacatatcaatataaaataattttctatattcgagacagatttgggtatggtttcgggatgagtacctatatacccgttacccgtcccaaacccatg 2985207  T
Q  204 ttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaa 247  Q
    | |||||||||| ||||||  |||||||||||||| ||||||||    
T  2985208 tcttgaaatcggagaaaactcaaacccagtcaaaacggggaaaa 2985251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 4582975 - 4583199
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||| ||||| || | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  4582975 tccaacaatatgctcactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 4583074  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||||| |||||||||||  |||||||| ||||||       ||||||||||||||     
T  4583075 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatac 4583174  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||||||||||    
T  4583175 ccgtgttttgaaatcggggaaaacc 4583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 177
Target Start/End: Complemental strand, 27088583 - 27088414
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||    
T  27088583 tccagcaatatgcttactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacataacaattatcaaacaaa 27088484  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggt 177  Q
    || |||| |||||| |||||||| || |||||| |||||| ||||||||||||||||||| ||||||||||    
T  27088483 ataacat-acatatcaacataaaataattttctacattcgagacgggtttgggtatgggttcggggtgggt 27088414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 3573081 - 3573240
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||| |    
T  3573081 tccagcaatatgctcactttaacatttgttagaccgattgatttagttgctcctttgaatatcaatggtagtttttataacacgacaattatcaaacaga 3573180  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    || ||||||||||| |||||||| || |||||| ||||||||| ||||||| ||||||||    
T  3573181 ataacatgacatatcaacataaaataattttctacattcgggaggggtttgagtatgggt 3573240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 30115340 - 30115524
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||||||||||||||||||||| |||  |||||||||||||||||||||| ||| || |||||||||||||  |||||||||||||||    
T  30115340 tccaacaatatgctcactttaacatttgttagactgatcgatttagttgctcctttaaatataaatggtggtttttataacacggcaattatcaaacaaa 30115439  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || ||||  ||||| |||||||| || |||| |||||||||||||||||||  ||||||| |||| |||||||| || |||||||    
T  30115440 ataacatagcatatcaacataaaataattttatgcattcgggacgggtttgaatatgggttcgggatgggtaccaatatacccgt 30115524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 5908921 - 5908608
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  5908921 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 5908822  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| |||||||||||||||||||||  |||||| |||| |||       ||||||||||||||     
T  5908821 aataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatac 5908722  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || ||||| || ||||||||||            ||| ||||||| |||||| |||||||||||||| ||||| ||||||||| |  |||||||||||||    
T  5908721 ccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtttggttcgggcggataaccacggg 5908622  T
Q  286 tatggatattgttg 299  Q
    ||||||| ||||||    
T  5908621 tatggattttgttg 5908608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 17853524 - 17853302
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  17853524 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 17853425  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||| ||||||||||| ||| ||||||| ||||       ||||||||||||||     
T  17853424 aataacat-acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatac 17853326  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || || |||||||||||||||||||    
T  17853325 ccgtg-tttgaaatcggggaaaacc 17853302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 28045511 - 28045696
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta--taacacatcaattatcaaaca 104  Q
    ||||||||||||||||||||||||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||  ||||| | ||||||| |||||    
T  28045511 tccaacaatatgttcactttaacatttgttagacgtaatgatttagttgatcctttaaatatcaatgatagtttttatttaacataacaattataaaaca 28045610  T
Q  105 aaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    |||| ||||||||||| ||||||||||| |||| | |||| ||||||||| ||||||||||| | |||||||||||||| |||||||    
T  28045611 aaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttc-gggtgggtacctatatacccgt 28045696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 1218615 - 1218796
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaat 108  Q
    |||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||| ||||||||| |||||   |||||||||||||||||    
T  1218615 caacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaat 1218714  T
Q  109 gacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
     |||| ||| || ||||||||||| |||| | |||| ||||||||| ||||||||||| ||| |||||||||||| |||||||    
T  1218715 aacat-acaaatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtacctatatacccgt 1218796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 4920682 - 4920995
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||| |||| | ||||||| |||||||||||||  | | ||||||||| || ||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  4920682 tccaataataagctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 4920781  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||| |||||||| |||||||       ||||||||||||||     
T  4920782 aataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatac 4920881  T
Q  199 ccatgttttgaaatcggggaaaaccta------------aacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || |||||||| ||||||||||||| |            ||||||||||||| || ||||||||||| ||||| ||||||||| |  || ||||||||||    
T  4920882 ccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacggg 4920981  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  4920982 tatgggttttgttg 4920995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 33862415 - 33862270
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||||| || ||||||||||||| |||||||||| ||||   |||||||||||||||    
T  33862415 tccaacaatatgttcactttaacatttgttagccc-attgatttagttggtcatttaaatatcaatcgtagtttttacaacatgacaattatcaaacaaa 33862317  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacggg 153  Q
    || ||||| ||||| |||||||| |||||||||||||||||||||||    
T  33862316 ataacatggcatatcaacataaaatagttttctgcattcgggacggg 33862270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 35311679 - 35311894
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  35311679 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 35311778  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||||||| || |||||||| ||| ||||||||||||       ||||||||||||||     
T  35311779 aataacat-acatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggagtgggtacctatatatctgttacccgtcccatac 35311877  T
Q  199 ccatgttttgaaatcgg 215  Q
    || ||||||||||||||    
T  35311878 ccgtgttttgaaatcgg 35311894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 18206888 - 18207056
Alignment:
Q  21 cactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatc-aattatcaaacaaaatgacatgacata 119  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  | |||||| ||||||||| ||||| ||||    
T  18206888 cactttaatatttgttagaccgattgatttagttgctcctttaaatatcattagtagtttttataacacggcaaattattaaacaaaataacatggcata 18206987  T
Q  120 ttaacata-aagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    | |||||| ||||| |||||| |||||||||||||||||  ||||||| | |||||||||||||| ||||    
T  18206988 tcaacatagaagtaattttctacattcgggacgggtttgaatatgggttc-gggtgggtacctatatacc 18207056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 228
Target Start/End: Complemental strand, 6156145 - 6155924
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacat--caattatcaaacaaaatga 110  Q
    |||||| ||||||||||||||||||||| || | ||||| ||||||||||||||||||||  || ||||||| || |||  ||||||||||||||||| |    
T  6156145 aatatgctcactttaacatttgttagacggaatgatttatttgctcctttaaatatcaatgatattttttattac-catgacaattatcaaacaaaataa 6156047  T
Q  111 catgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-----ttacccgtcccatatccatgtt 205  Q
    |||| ||||| ||||||||||| |||||  |||| | ||||| ||||||||||||| |||||||||||| |||     ||||| |||| ||| || ||||    
T  6156046 catgtcatataaacataaagtaattttcaacatttgtgacggttttgggtatgggttcggggtgggtacatatataccttacctgtcctatacccgtgtt 6155947  T
Q  206 ttgaaatcggggaaaacctaaac 228  Q
    |||||||||||||||||| ||||    
T  6155946 ttgaaatcggggaaaacccaaac 6155924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 15890063 - 15890286
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| |||||||||||||||||||||||||||||  | ||||||| ||| ||||| |||||||||| |||||||| || || |   ||||||||||| ||    
T  15890063 tccaccaatatgttcactttaacatttgttagacgtaattatttaattgatccttcaaatatcaatggtagttttcattaatatgacaattatcaaataa 15890162  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||||| ||||||||||| | ||||||||||||||       ||||||||||||||     
T  15890163 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttc-gggtgggtacctatatacccgttacccgtcccatac 15890261  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||||||||| |||||||    
T  15890262 ccgtgttttgaaatcggagaaaacc 15890286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 22695134 - 22694949
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | || |||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  22695134 tccaacaataagctcactttcacatttgttagacaaaatgatatagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 22695035  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||||||||||||||||||| |||||||||||||| | |||||||    
T  22695034 aataacattacatatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctctatacccgt 22694949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 6092728 - 6092566
Alignment:
Q  30 atttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataa 128  Q
    |||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||||| |||| |||||| |||||||    
T  6092728 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 6092629  T
Q  129 agtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    |||| |||| | |||| ||||||| ||||||||||||| |||||||||||||||| |||||||    
T  6092628 agtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgt 6092566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 282
Target Start/End: Complemental strand, 12834808 - 12834511
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| |||||||||||||||||||||  |   ||||| ||| || || |||||||||| ||||||||||| ||||   ||||||||||||||    
T  12834808 tccaccaatatgctcactttaacatttgttagacgtaacgatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaa 12834709  T
Q  106 aatgacat-gacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| ||||||| |||||||| || |||| | |||| ||||||||| ||||||||||| |||||| |||||||||       ||||||||||||||    
T  12834708 aataacatagacatatcaacataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccata 12834609  T
Q  198 tccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccac 282  Q
    ||||||||||||||| || ||||            ||| |||||||||||||| |||||||||||||| ||||||||||||||| || || |||||||    
T  12834608 tccatgttttgaaattggagaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttggttcggacgggtaaccac 12834511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 12866785 - 12866561
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| |||||||||||||||||||||  |   ||||| ||| || || |||||||||| ||||||||||| ||||   ||||||||||||||    
T  12866785 tccaccaatatgctcactttaacatttgttagacgtaacaatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaa 12866686  T
Q  106 aatgacat-gacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| ||||||| ||||||||||| |||| | |||| ||||||||| ||||||||||| || |||||||||||||       ||||||||||||||    
T  12866685 aataacatagacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccata 12866586  T
Q  198 tccatgttttgaaatcggggaaaac 222  Q
     ||||||||||||||||| ||||||    
T  12866585 cccatgttttgaaatcggagaaaac 12866561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 40517662 - 40517847
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  40517662 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 40517761  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||| || |||| | | || |||||||||||| |||||||| ||||||||||| |||| |||||||    
T  40517762 aataacataacatatcaacataaaataattttttacctttgggacgggtttgagtatgggttcggggtgggtaactatatacccgt 40517847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 42987712 - 42987490
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  42987712 tccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 42987613  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||||||||||||||||||| |||| |||||||||||       |||| |||||||||     
T  42987612 aataacataacatatcaacataaaataattttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatac 42987513  T
Q  199 ccatgttttgaaatcggggaaaa 221  Q
    || |||||||| |||||||||||    
T  42987512 ccgtgttttgagatcggggaaaa 42987490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 29246184 - 29245871
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||| ||| | | |||||||||||| ||||| ||||| |||| | ||||||||||||||    
T  29246184 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgattcattaaatatcaatggtagtgtttattaacataacaattatcaaacaa 29246085  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||  |||||||| || |||| | |||| |||| |||| |||||||||||  |||||||||||||||       |||  |||||||||     
T  29246084 aataacatgacataccaacataaaataattttttacatttgggatgggtatgggtatgggtttggggtgggtacctatatacatgttattcgtcccatac 29245985  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || |||||||||||||| ||||            ||| ||||| |||||||| |||||||||||||| ||||||||||||||| |  || ||||| ||||    
T  29245984 ccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccgcggg 29245885  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  29245884 tatgggttttgttg 29245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 13402235 - 13402052
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||| |||||||||||||||||  | | ||||||||| ||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  13402235 tccaacaatatgctcattttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaa 13402136  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||| | ||| ||||| ||| |||||||||||  |||||||    
T  13402135 aataacat-acatatcaacataaagtaattttttacatttgggacgggtatcggt-tgggttcggagtgggtacctaaatacccgt 13402052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 3564960 - 3564778
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||||||| ||||||||||||||||  ||||||||| |||||   ||||||||||||||    
T  3564960 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 3564861  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggt-gggtacctatttacc 188  Q
    ||| |||| |||||| ||||||||||| |||| | |||| || |||||| ||| ||||||| ||| || |||||||||| ||||    
T  3564860 aataacat-acatatcaacataaagtaattttttacatttggaacgggtatggatatgggttcggagtagggtacctatatacc 3564778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 30996455 - 30996637
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaa 107  Q
    |||||||| | ||||||||||||| ||||||| || | ||||| ||| |||||||||||||||  ||||||||||| ||||   ||||||||||||||||    
T  30996455 caacaatacgctcactttaacatt-gttagacggaatgatttatttgatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaa 30996553  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    | ||||| ||||| ||| ||||||| |||| | |||| ||||||||||||||| || || |||||||||||||||| |||||||    
T  30996554 taacatggcatatcaacttaaagtaattttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgt 30996637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 27302965 - 27302746
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||||||||||||||||||||  || | ||||||||| |||||||||||||||| |||  |  ||  |||   |||||||||||||||    
T  27302965 tccaacaatatgatcactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtacgtagta--acatgacaattatcaaacaaa 27302868  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||||||||||||||| |||| | | || |||||| || ||  ||||| | ||||||||||||||||       ||| ||||| ||||||    
T  27302867 ataacatgacatattaacataaagtaattttttacgtttgggacgtgtatgactatggattcggggtgggtacctatatatttgttatccgtctcatatc 27302768  T
Q  200 catgttttgaaatcggggaaaa 221  Q
    | ||||||||||||||||||||    
T  27302767 cgtgttttgaaatcggggaaaa 27302746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 299
Target Start/End: Original strand, 10127072 - 10127243
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgttttgaaatcggggaaa------------acctaaac 228  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| || |||||||| ||||||||||            ||| ||||    
T  10127072 catttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaac 10127171  T
Q  229 ccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||| |||||||||||||| |||||  |||||||| |  |||||||||||||||||||| ||||||    
T  10127172 ccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatggattttgttg 10127243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 42717849 - 42717696
Alignment:
Q  22 actttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatc-aaacaaaatgacatgacatat 120  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||||  |||||||||||||||  |||||||| |||||||||  |||| ||| |    
T  42717849 actttaacatttgttagaccggttgatttagtttctcctttaaatatcaatgatagtttttataacacgacaattatcaaaacaaaatatcatggcatgt 42717750  T
Q  121 taacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgg 175  Q
     ||||| ||||| |||||||||||| |||||| |||| | |||||| | ||||||    
T  42717749 caacat-aagtaattttctgcattcaggacggatttgagcatgggttcagggtgg 42717696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 8453598 - 8453457
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgaca 112  Q
    |||||| ||| ||||||||||||| |||||| | |||||||| ||||||||||||||||| ||| |||||||||||   ||||||| ||||||||| ||     
T  8453598 aatatgctcattttaacatttgtttgaccgaatgatttagttactcctttaaatatcaatggtaatttttataacatgacaattattaaacaaaataac- 8453500  T
Q  113 tgacatattaacataaagtagttttctgcattcgggacgggttt 156  Q
     |||||||||||||||| || |||||| |||| |||||| ||||    
T  8453499 -gacatattaacataaactaattttctacatttgggacgagttt 8453457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 20973715 - 20973587
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaaaat 108  Q
    ||||||| | ||||||||| |||| |||||| || | ||||||||| | ||||| |||||||| |||||||||| |||||   |||||||||||||||||    
T  20973715 aacaatacgctcactttaatattttttagacggaatgatttagttgatactttacatatcaatggtagtttttattaacatgacaattatcaaacaaaat 20973616  T
Q  109 gacatgacatattaacataaagtagtttt 137  Q
      |||||||||| ||||||||||| ||||    
T  20973615 accatgacatatcaacataaagtaatttt 20973587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 6369566 - 6369725
Alignment:
Q  21 cactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacata 119  Q
    |||||||||||||||||||| || | ||||||||| || |||||| |||||  |||||||| || ||||    |||||||||||||||| ||| |||  |    
T  6369566 cactttaacatttgttagacggaatgatttagttgatcttttaaacatcaacggtagttttcattaacatgataattatcaaacaaaataacacgacgca 6369665  T
Q  120 ttaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtac 179  Q
    | ||||||||||| |||| | ||||  |||||||||   |||||||| ||||||||||||    
T  6369666 tcaacataaagtaattttttacattttggacgggttaaagtatgggttcggggtgggtac 6369725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 10822574 - 10822503
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    |||||||||| ||| || |||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||    
T  10822574 ttacccgtcctatacccgtgttttgaaatcggagaaaacccaaatccagtcaaaatggggaaaacccgtcaa 10822503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 33420494 - 33420404
Alignment:
Q  75 tagtttttataacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||| || ||||| || |||||| |||||  |||||||||||||||||||    
T  33420494 tagtttttataacacgacaattatcaaataaaataacatgacatatcaatataaaata-ttttctacattcaagacgggtttgggtatgggt 33420404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 10126964 - 10127041
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| || ||||||||||||| |||||||||||    
T  10126964 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcttttaaatatcaatggtagtttttat 10127041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 27900499 - 27900411
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaac 222  Q
    |||||||| ||| ||||||||||||| || | |||||||||||       |||||||||||||| |||||||||||||||||| |||||    
T  27900499 cattcggggcggatttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaac 27900411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 15564578 - 15564649
Alignment:
Q  92 caattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatg 163  Q
    ||||| ||||| ||||| ||||||||||| ||  ||||||| |||||| ||||||||||| ||||| |||||    
T  15564578 caattttcaaaaaaaataacatgacatatcaatgtaaagtaattttctacattcgggacgagtttgagtatg 15564649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 38973012 - 38973091
Alignment:
Q  221 acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||||||| |||||||||| ||| || |||||||||||  | |||||| || |||| | |||||||||||    
T  38973012 acctaaacccagtcaaaacggggaaaacctgtcaaaatgagtttggttggggtggatacccgcgggcaaggatattgttg 38973091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 40517900 - 40517975
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtcaa-ttgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| ||| |||| ||||||| |||| ||||||||||  || ||||||||||||||| | ||||||    
T  40517900 aaacccagtcaaaacgggaaaaatccgtcaaattgaatttggttcaggcgggtaaccacgggtatgggttttgttg 40517975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 17853288 - 17853223
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    ||||||| |||||| |||||||||||||| ||||  ||||||||||| ||| ||||| ||||||||    
T  17853288 aaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcaggtgggtaaccgcgggtatg 17853223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 20973581 - 20973544
Alignment:
Q  154 tttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  20973581 tttgggtatgggttcggggtgggtacctatatacccgt 20973544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 17153153 - 17153185
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggt 166  Q
    |||||| ||||||||||||||||||||||||||    
T  17153153 ttttctacattcgggacgggtttgggtatgggt 17153185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 6028121 - 6027820
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttt-ataacacatcaattatcaaacaa 105  Q
    |||| ||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||| |||||||  ||||||||||||||    
T  6028121 tccatcaatattctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatgatagttttttataacacgacaattatcaaacaa 6028022  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||| | ||| |||||||| || |||||||||||| |||||||| || |||||||| ||||||||||||||||       ||||||||| ||||     
T  6028021 aataacatggcttatcaacataaaatacttttctgcattcaggacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgtctcatac 6027922  T
Q  199 ccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgt 297  Q
    ||||||||| ||||||||||||||| ||||||| |||||| |||||||||||||| ||||| ||||||||| |  ||||||||||| |||||| | ||||    
T  6027921 ccatgttttaaaatcggggaaaacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgt 6027822  T
Q  298 tg 299  Q
    ||    
T  6027821 tg 6027820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 31942417 - 31942236
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  31942417 tccaacaatatgttcactttaacatttgttagaccgactgatttagttgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 31942318  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    || ||||| ||||| | ||||||||||||||||||||| | ||| ||||||| |||||||  ||||||||||| ||| ||||    
T  31942317 ataacatggcatatcagcataaagtagttttctgcatttgtgacaggtttggttatgggtttggggtgggtacttatatacc 31942236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 19105067 - 19104888
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||||||||||||  ||||||| ||||||||| ||    
T  19105067 caatatgctcactttaacatttgttagaccgatcgatttagttgctcttttaaatatcgatagtagtttttataacacggcaattattaaacaaaataac 19104968  T
Q  112 atgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||||||  | ||||||||||| |||||||||||||||||||||||| |||||| | || ||||| ||||||| |||||||    
T  19104967 atgacacgtcaacataaagtaattttctgcattcgggacgggtttgagtatggattcgaggtggatacctatatacccgt 19104888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 24414361 - 24414140
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaat 108  Q
    ||||||| | ||||||| |||||||||||||  | ||||||||||| || ||||||||||||| ||||||||||| ||||   |||||||||||||||||    
T  24414361 aacaataagctcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaat 24414262  T
Q  109 gacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcca 201  Q
     |||| |||||| |||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||       |||||||||||||| ||     
T  24414261 aacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccg 24414162  T
Q  202 tgttttgaaatcggggaaaacc 223  Q
    |||||||| |||||||||||||    
T  24414161 tgttttgagatcggggaaaacc 24414140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 30846802 - 30847116
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  30846802 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 30846901  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| |||||| |||||||||||| |||| | || | ||||||||||||||||||||| ||||||||||||||||       ||||||||||||||    
T  30846902 aataacataacatatcaacataaagtagtttttttacaattgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccata 30847001  T
Q  198 tccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgg 284  Q
     || ||||| || ||||||||||            ||| |||||||||||||| |||||||||||||| ||||| ||||||||| |  || |||||||||    
T  30847002 cccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgg 30847101  T
Q  285 gtatggatattgttg 299  Q
    |||||| | ||||||    
T  30847102 gtatgggttttgttg 30847116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 36128339 - 36128153
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| ||||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  36128339 tccaacaataagttcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 36128240  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||||||| |||| | |||| ||||||||||||||||||||| ||||||| |||||||| |||||||    
T  36128239 aataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacccgt 36128153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 13705593 - 13705408
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | |||||||||||||||||| || || | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  13705593 tccaacaatacgctcactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 13705494  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| ||||||||||| ||||||||||| ||||   |||| ||||||||||| ||||||||| |||||||||||||||| |||||||    
T  13705493 aataacatgacatatcaacataaagtaatttttcacatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgt 13705408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 14540643 - 14540823
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||    ||||||||||||||||  |||||||||||||||    
T  14540643 tccagcaatatgctcactttaacatttgttagactgattgatttagttgctcctttaaatatc----gtagtttttataacacgacaattatcaaacaaa 14540738  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    || ||||||||||| ||||||||||| |||||| | |||||||||| |||| |||||| | | | |||||| ||||| |||||||    
T  14540739 ataacatgacatatcaacataaagtaattttctacgttcgggacggatttgagtatggattccgagtgggtgcctatatacccgt 14540823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 9632243 - 9632556
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||||||||| ||||   ||||||| ||| ||    
T  9632243 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaa 9632342  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||||||||||| | |||| ||||||||||||||||||||| |||||||| |||||||       ||||||||||||||     
T  9632343 aataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatac 9632442  T
Q  199 ccatgttttgaaatcggggaaaaccta------------aacccagtcaaaaaggggaaaacccgtcaa-ttgagtttggttcagatggataaccacggg 285  Q
    || ||||| || ||||||||||||| |            |||||| |||||| ||| |||||||||||| ||||||||||||| |  || ||||||||||    
T  9632443 ccgtgtttcgagatcggggaaaacccatacccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccacggg 9632542  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  9632543 tatgggttttgttg 9632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 45256682 - 45256903
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaa 107  Q
    |||||||| ||||||||||||||||||||||| || | ||||||||| |||||||||||||||| ||| ||||||| ||||   ||||||||||||||||    
T  45256682 caacaatacgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaa 45256781  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | ||| ||||||| || |||||||| |||| | |||| ||||||||||| ||||||||| |||||||||||| |||       ||| ||||| |||| ||    
T  45256782 taacaagacatatcaaaataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcataccc 45256881  T
Q  201 atgttttgaaatcggggaaaac 222  Q
     |||||||||||||||||||||    
T  45256882 gtgttttgaaatcggggaaaac 45256903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 12194059 - 12193836
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||| || | || |||||| |||||||||||||||| |||||||||| |||||    |||||||||||||    
T  12194059 tccaacaatatgttcactttaacatttgttagacggaatgatgtagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 12193960  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||||| ||| ||||| | || |||||||| ||||       ||||||||||||||     
T  12193959 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatggatatggattcgaggtgggtatctatatacccattacccgtcccatac 12193860  T
Q  199 ccatgttttgaaatcggggaaaac 222  Q
    || |||| |||||||||| |||||    
T  12193859 ccgtgttctgaaatcgggaaaaac 12193836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 16226958 - 16226803
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||| ||||||||||||||| ||||||| ||| |||||||||||  ||||||||||||| ||||||||||||||||  ||||||||||| |||    
T  16226958 tccaacaatatattcactttaacatttcttagaccaattgatttagttgctaatttaaatatcaatggtagtttttataacacgacaattatcaaataaa 16226859  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatg 163  Q
    || |||||||| || ||||| |||||| ||||||||||| | |||||||||||||||    
T  16226858 ataacatgacaaatcaacatgaagtag-tttctgcattccgaacgggtttgggtatg 16226803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 10920502 - 10920711
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  10920502 tccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 10920601  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgtcccatatccatgtt 205  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||| ||||||||||||| |||||||| ||||||| || ||||||||||  | ||||    
T  10920602 aataacataacatatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtggatacctatatatccgtcccatactcgtgtt 10920701  T
Q  206 ttgaaatcgg 215  Q
    |||| |||||    
T  10920702 ttgagatcgg 10920711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 13830593 - 13830905
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttata-acacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| |||||||||||  |||   ||||||||||||||    
T  13830593 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttatttacatgacaattatcaaacaa 13830692  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttac------ccgtcccatatc 199  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||| |||||| |||||||| |||||||||||| ||| |||      |||||||||| |    
T  13830693 aataacataacatatcaacataaagtaattttttacatttgggacaggtttgagtatgggttcggggtgggtacttatatacccgttaccgtcccatacc 13830792  T
Q  200 catgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggt 286  Q
    | |||||||| |||| |||||            ||| |||||||||||||| |||||||||||||| ||||| ||||||||| |  || |||||||||||    
T  13830793 cgtgttttgagatcgaggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggt 13830892  T
Q  287 atggatattgttg 299  Q
    |||| | ||||||    
T  13830893 atgggttttgttg 13830905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 37106556 - 37106773
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  37106556 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37106655  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| | |||| ||||||||||| |||| | |||| |||||      |||||||||| ||| ||||||||||||       ||||||||||||||     
T  37106656 aataacat-atatatcaacataaagtaattttttacatttgggac------gggtatgggttcggagtgggtacctatatacccgttacccgtcccatac 37106748  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||||||||||    
T  37106749 ccgtgttttgaaatcggggaaaacc 37106773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 8916169 - 8915987
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||  |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  8916169 tccaacaataagctcactttcacatttgttagacaaaataatttagttaatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 8916070  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    ||| |||| |||||| |||||||| || |||| | |||| |||||||||||| |||||||| |||||||||||||||| ||||    
T  8916069 aataacataacatatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacc 8915987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 37999353 - 37999616
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||||||| | |||||||||||||| ||||||||||| ||||   ||||||||||||||||| |||| ||||    
T  37999353 tcactttcacatttgttagacaaaatgatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 37999452  T
Q  119 attaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaa 211  Q
    || ||||||||||| |||| | |||| |||||||||||||||||| || |||||||||||| |||       ||||||||| |||| || |||||||| |    
T  37999453 atcaacataaagtaattttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgaga 37999552  T
Q  212 tcggggaaa------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    |||||||||      ||| | |||||||||||| |||| ||||||||| |||||| ||||||||    
T  37999553 tcggggaaaacccatacccatacccagtcaaaatgggggaaacccgtcaaattgaatttggttc 37999616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 7314880 - 7314695
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||||  |||||||||||||| ||||| || | ||||||||| ||||||||||||||||  |||||||||| ||||    | |||||||||||    
T  7314880 tccaacaatatgcccactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgatatttatcaaacaa 7314781  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| ||||||||||| |||||||| || |||| | |||| ||||||||| ||||||||||| ||||||||| |||||| |||||||    
T  7314780 aataacatgacatatcaacataaaataattttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgt 7314695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 10208662 - 10208438
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||| ||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  10208662 tccaacaataaactcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 10208563  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||||||||||||||| |||| | |||| ||||| |||||| |||||||| |||||| |||||||||       ||||||||||||||     
T  10208562 aataacataacatattaacataaagtaattttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatac 10208463  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||| | || ||||||||||    
T  10208462 ccgtgttttaagattggggaaaacc 10208438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 42798221 - 42798035
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  42798221 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 42798122  T
Q  106 aatgacatgacatattaacataaagt-agttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||||| | |||| | |||| ||||| |||||| |||||||| |||||||||||| ||| |||||||    
T  42798121 aataacataacatatcaacataaagtaatttttttacatttgggacaggtttgtgtatgggttcggggtgggtacttatatacccgt 42798035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 44746341 - 44746117
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacat--caattatcaaaca 104  Q
    |||||||||||| ||||| ||||||||||||||| || | ||||| ||||||||||||||||||||  ||||||||||||| |||  |||| |||||| |    
T  44746341 tccaacaatatgctcactctaacatttgttagacggaataatttatttgctcctttaaatatcaatgatagtttttataac-cattacaatgatcaaata 44746243  T
Q  105 aaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    |||| ||||| ||||| || |||||||  |||||| |||| |||||||||||| ||||| ||  |  |||||||| |||       ||||||||||||||    
T  44746242 aaataacatggcatatcaagataaagtgattttctacatttgggacgggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccata 44746143  T
Q  198 tccatgttttgaaatcggggaaaacc 223  Q
    | | ||||||||||||||||||||||    
T  44746142 ttcgtgttttgaaatcggggaaaacc 44746117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 45115418 - 45115638
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaat 108  Q
    ||||||| | |||||||||||||| ||||||  | | ||||| ||| |||||||||||||||| ||||||||||| ||||   |||||||||||||||||    
T  45115418 aacaatacgctcactttaacatttattagacaaaatgatttaattgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaat 45115517  T
Q  109 gacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcca 201  Q
     ||||||||||| ||||||| ||| |||| | |||| |||| ||||||   ||||||| |||| |||||||||||       ||||||||| |||| ||     
T  45115518 aacatgacatatcaacataatgtaattttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgtctcatacccg 45115617  T
Q  202 tgttttgaaatcggggaaaac 222  Q
    ||||||||||||| |||||||    
T  45115618 tgttttgaaatcgaggaaaac 45115638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 37472961 - 37472854
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  37472961 tccaacaatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37472862  T
Q  106 aatgacat 113  Q
    ||| ||||    
T  37472861 aataacat 37472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 18106322 - 18106162
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| ||||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||  ||||||||| |||||   ||||||||||||||    
T  18106322 tccaacaataagttcactttcacatttgttagacaaaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 18106223  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| |||| |  ||| |||||||| || |||| | |||| || || |||| ||||||||||    
T  18106222 aataacataatgtatcaacataaaataattttttacatttggaacaggttcgggtatgggt 18106162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 37319799 - 37319862
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatca 70  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  37319799 tccagcaatatgttcattttaacatttgttagaccgattgatttagttgctactttaaatatca 37319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 35248489 - 35248386
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacct-------atttacccgtcccatatccatgttttgaaatcggggaaaacctaa 226  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||||        ||||||||||||||| || ||||||| ||||| |||||||| ||    
T  35248489 ttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaa 35248390  T
Q  227 accc 230  Q
    ||||    
T  35248389 accc 35248386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 15546786 - 15546833
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaaccca 231  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||    
T  15546786 ttacccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca 15546833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 25210362 - 25210467
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaa 226  Q
    |||||| ||||||||| |||||| |||||||||  ||||||||||| |||       |||||||||||||| || |||||| || ||||| |||||||||    
T  25210362 ttttctacattcgggaggggttttggtatgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaaaacctaa 25210461  T
Q  227 acccag 232  Q
    ||||||    
T  25210462 acccag 25210467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 12341695 - 12341760
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    |||| ||||||||| |||||||||||||| ||||| ||||||||| || |||||||| ||||||||    
T  12341695 aaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggataaccgcgggtatg 12341760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35965320 - 35965365
Alignment:
Q  134 ttttctgcattcgggacgggtttgggtatgggtccggggtgggtac 179  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||    
T  35965320 ttttctacattcgggacgggtttgggtatgggttcggagtgggtac 35965365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 38342622 - 38342519
Alignment:
Q  135 tttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaa 227  Q
    ||||| ||||||||  |||||||||||||||| |||||||||||| |||       ||||||||||| ||||| | |||| ||||||||||||||  |||    
T  38342622 tttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaa 38342523  T
Q  228 ccca 231  Q
    ||||    
T  38342522 ccca 38342519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 35409196 - 35409160
Alignment:
Q  202 tgttttgaaatcggggaaaacctaaacccagtcaaaa 238  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35409196 tgttttgaaatcggggaaaacccaaacccagtcaaaa 35409160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 37472806 - 37472709
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    |||||||||||||| || |||||||||||||||||||            ||| |||||||||||||| |||||||||||||| |||||||||||||||    
T  37472806 ttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttc 37472709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 2630805 - 2630574
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||| ||  |||||||||||||||    
T  2630805 tccaacaatatgttcactttaacatttgatagaccgattgatttagttgctcatttaaatatcaatggtagtttttataatacggcaattatcaaacaaa 2630706  T
Q  107 atgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    || ||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||       | ||||||||||||     
T  2630705 ataacatggcatatcaacataaagtagtttttttgcattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatac 2630606  T
Q  199 ccatgttttgaaatcggggaaaacctaaaccca 231  Q
    ||||||||| ||||||||||||||| |||||||    
T  2630605 ccatgtttt-aaatcggggaaaacccaaaccca 2630574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 5376947 - 5377175
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||    
T  5376947 tccaacaatatgctcattttaacatttgttaaaccgattgatttagttgctcctttaaatatcattggtagtttttataacacgacaattatcaaacaaa 5377046  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta-------tttacccgtcccatatc 199  Q
    || |||||| |||| ||||||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||       ||||||||||||||| |    
T  5377047 attacatgatatatcaacataaagtaattttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacc 5377146  T
Q  200 catgttttgaaatcggggaaaacctaaac 228  Q
      |||||||||||||||||||||| ||||    
T  5377147 tgtgttttgaaatcggggaaaacccaaac 5377175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 12980238 - 12980470
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  12980238 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacgaaaattatcaaacaaa 12980337  T
Q  107 atgacatgacatattaacataaagta-gttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    || ||||| ||||| |||||||| ||  |||| |||||| ||||||||||||||||||||| |||||||||||| |||       ||||||||||||||     
T  12980338 ataacatggcatatcaacataaaatattttttttgcatttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatac 12980437  T
Q  199 ccatgttttgaaatcggggaaaacctaaaccca 231  Q
    || |||||||||||||||||||||| |||||||    
T  12980438 ccgtgttttgaaatcggggaaaaccaaaaccca 12980470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 24 - 268
Target Start/End: Original strand, 3920417 - 3920669
Alignment:
Q  24 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaa 123  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||   ||||||||||||||||| ||||| ||||| ||    
T  3920417 tttaacatttgttagaccgattcatttagttgttcctttaaatatcaatggtagtttttataacatggcaattatcaaacaaaataacatggcatatcaa 3920516  T
Q  124 cataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggg 216  Q
    |||||| || |||||| |||||||||| | ||||||||||||| ||||||||||||||||       ||| |||||||||| |  |||||||||||||||    
T  3920517 cataaaataattttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggg 3920616  T
Q  217 gaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    ||||||| |||||||||||||| ||| ||||||| || ||||| |||||||||    
T  3920617 gaaaacccaaacccagtcaaaacgggaaaaacccatcaaattgggtttggttc 3920669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 27850556 - 27850261
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||||||   ||||||||||||||  |||||||||||||||    
T  27850556 tccaacaatatgctca-tttaacatttgttagatcgattgatttagttgctcctttaaatatcaatgaaagtttttataacacgacaattatcaaacaaa 27850458  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||| | | ||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||       |||||||||||||| |    
T  27850457 ataacatgacatatcatcgtaaagtaattttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacc 27850358  T
Q  200 catgttttgaaatcggggaaa------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    | |||||||||||||||||||      ||| ||||||| |||||| |||||||| ||||| ||||| ||||||||| |  || ||||||||| ||||    
T  27850357 cgtgttttgaaatcggggaaaacccatacccaaacccaatcaaaacggggaaaaaccgtcaaattgggtttggttcgggcgggtaaccacggatatg 27850261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 18826103 - 18825872
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||| |||||| |||||||||||||||||||||||||| ||||||||| || |||| |||||||| ||||||||||||||||  |||||||||||||||    
T  18826103 tccaataatatgctcactttaacatttgttagaccgattgatttagttgttcttttatatatcaatggtagtttttataacacgacaattatcaaacaaa 18826004  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||| ||||| ||| |||| || ||||||| ||| |||| ||||||||||| |||| ||||||||||||||||       |||||||||||||| |    
T  18826003 ataacatggcatatcaacgtaaaataattttctgtatttgggatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacc 18825904  T
Q  200 catgttttgaaatcggggaaaacctaaaccca 231  Q
    | |||||||||||||||||||||| |||||||    
T  18825903 cgtgttttgaaatcggggaaaacccaaaccca 18825872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 26622834 - 26623103
Alignment:
Q  28 acatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaacata 127  Q
    ||||||||| |||| ||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||    
T  26622834 acatttgtttgaccaattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatggcatatcaacata 26622933  T
Q  128 aagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaa 220  Q
    || || |||| ||||||||  ||| |||||||||||||| |||||||||||| |||       |||||| ||||||| || |||||||||||| ||||||    
T  26622934 aaataattttttgcattcgaaacgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaa 26623033  T
Q  221 acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    ||| ||||||| |||||| |||||||| ||| | || ||| |||||||| ||  ||||| ||||||||||    
T  26623034 acccaaacccactcaaaacggggaaaatccgacaaaatgaatttggttcggaccgataaacacgggtatg 26623103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 35 - 289
Target Start/End: Complemental strand, 26004675 - 26004415
Alignment:
Q  35 ttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacatattaacataaagtagt 134  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||||| |   ||||||||||||||||| ||||| ||||| ||||||||||| |    
T  26004675 ttagaccgattgatttagtcgctcctttaaatatcaatgatagtttttataagaagacaattatcaaacaaaataacatggcatatcaacataaagtaat 26004576  T
Q  135 tttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaa 227  Q
    |||||||||||||| || |||  ||||||||| ||||||||||| ||||       |||||||||||||| ||| |||||||||||| |||||||| |||    
T  26004575 tttctgcattcggggcgagtt--ggtatgggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaaacccaaa 26004478  T
Q  228 cccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    ||||||||||| ||| ||||||| || ||||| ||||||||| |  || ||||||||||||||    
T  26004477 cccagtcaaaacgggaaaaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatg 26004415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 16078875 - 16079103
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||  ||||||||||||||||  |||||||||||||||    
T  16078875 tccaacaatatgttcactttaacattttttagaccgattgatttagtttctcctttaaatatcaagggtagtttttataacacgacaattatcaaacaaa 16078974  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||| ||||| ||| ||||||| ||||||| ||||  |||| |||||||||| |||  |||||||| ||||||       |||||||||||||| |    
T  16078975 ataacatggcatatcaacgtaaagtaattttctgtattcatgacgagtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacc 16079074  T
Q  200 catgttttgaaatcggggaaaacctaaac 228  Q
    | |||||||| ||||| ||||||| ||||    
T  16079075 cgtgttttgagatcggagaaaacccaaac 16079103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 17885326 - 17885639
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttata-acacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||| ||||  || | ||||||||| |||||||||||||||| |||||||||||  |||   ||||||||||||||    
T  17885326 tccaacaatatgttcactttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtagtttttattgacatgacaattatcaaacaa 17885425  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||||| ||||||||||| |||||| || ||||||       ||||||||||||||     
T  17885426 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatac 17885525  T
Q  199 ccatgttttgaaatcggggaaaaccta------------aacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    ||||||||| ||||||||||||||| |            ||||||||||||| |||||||||||||| ||||| ||||||||| |   | ||||||||||    
T  17885526 ccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacggg 17885625  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  17885626 tatgggttttgttg 17885639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 25783138 - 25782956
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    ||||||||| || ||||||||| |||| ||| ||||||| ||||||||||||||||||||||  ||  |||||||||||||||  |||||||||||||||    
T  25783138 tccaacaatgtgctcactttaatatttattataccgattgatttagttgctcctttaaatattgatgatagtttttataacactgcaattatcaaacaaa 25783039  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttaccc 189  Q
    || | |||| |||||||||||||||| ||||||||||||||||||| ||| |||||| || |||||||||||||||| |||||    
T  25783038 ataatatgagatattaacataaagtaattttctgcattcgggacggattttggtatgagttcggggtgggtacctatataccc 25782956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 35074330 - 35074644
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  35074330 tccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 35074429  T
Q  106 aatgacatgacatattaacataaagtag-ttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| |||| |||||| |||||||||||| |||| | |||| ||||||||||||||||||||| |||| |||||||||||       ||||||||||||||    
T  35074430 aataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccata 35074529  T
Q  198 tccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgg 284  Q
     || |||||| | ||||||||||            ||| |||||||||||||| |||||||||||||| ||||| ||||||||| |  || |||||||||    
T  35074530 cccgtgttttaagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtctaattgggtttggttcgggcgggtaaccacgg 35074629  T
Q  285 gtatggatattgttg 299  Q
    |||||| | ||||||    
T  35074630 gtatgggttttgttg 35074644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 18125460 - 18125275
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | ||||||||||| | |||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  18125460 tccaacaataagctcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 18125361  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||||||||||| | |||| |||||||||||||||||| || |||||||||||||||| |||||||    
T  18125360 aataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgt 18125275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 21702522 - 21702744
Alignment:
Q  9 caacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaa 107  Q
    |||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||| ||| ||||||||||| ||||   ||||||||||||||||    
T  21702522 caacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatataaatggtagtttttattaacatgacaattatcaaacaaaa 21702621  T
Q  108 tgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatcc 200  Q
    | |||| |||||| |||||||||||||||| | |||| |||||||||| |||||||||| ||||||||||||||||       |||||||||||||| ||    
T  21702622 taacataacatatcaacataaagtagttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccataccc 21702721  T
Q  201 atgttttgaaatcggggaaaacc 223  Q
     ||||| || |||||||||||||    
T  21702722 gtgtttcgagatcggggaaaacc 21702744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 289
Target Start/End: Original strand, 30650505 - 30650795
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||||| |||| ||||    
T  30650505 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 30650604  T
Q  119 attaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaa 211  Q
    || ||||||||||| |||| | |||| ||||||| ||||||||||||| ||||||||||||||||       |||||||||||||| || |||||||| |    
T  30650605 atcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaga 30650704  T
Q  212 tcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    | |||||||            |||||||||||||||||| |||||||||||||| ||||| ||||||||| |  || ||||||||||||||    
T  30650705 ttggggaaaactcatacccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatg 30650795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 7779869 - 7780182
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||||||||   ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  7779869 tccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 7779968  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| |||||||| ||  ||| | |||| ||||||||||||||||| ||| ||||||||||||||||       ||| ||||||||||     
T  7779969 aataacataacatatcaacataaaataaatttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatac 7780068  T
Q  199 ccatgttttgaaatcggggaaa------------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || |||||||| ||||||||||            ||| |||||||||||||| |||||||| ||||| ||||||||||||||| ||||| ||||||||||    
T  7780069 ccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgggtaaccacggg 7780168  T
Q  286 tatggatattgttg 299  Q
    ||||| | ||||||    
T  7780169 tatgggttttgttg 7780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 10 - 268
Target Start/End: Original strand, 24425246 - 24425511
Alignment:
Q  10 aacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatg 109  Q
    ||||||||| ||||||||||||||||||||||| || ||||| ||| |||||||||||||||| ||||||||||||||||   |||||||||||| |||     
T  24425246 aacaatatgctcactttaacatttgttagaccggttgatttatttg-tcctttaaatatcaatggtagtttttataacacgataattatcaaacagaata 24425344  T
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccat 202  Q
    ||||| ||||| |||||| |||| |||| |||||| || ||||||||||  |||||  | ||||||||||||||       |||||||||||||| || |    
T  24425345 acatggcatatcaacatatagtaattttatgcatttggaacgggtttggaaatggggtcagggtgggtacctatatacccgttacccgtcccatacccgt 24425444  T
Q  203 gttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    ||||||||||| | |||||   ||||||| |||||| || ||||| ||||| ||||| |||||||||    
T  24425445 gttttgaaatcagagaaaattcaaacccaatcaaaacggagaaaatccgtcaaattgggtttggttc 24425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 37579129 - 37579308
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgac 111  Q
    ||||||| ||||||||||||||||||||  |||| |||||||||||| |||||||||||||  || |||||||||||   ||||||||||||||||| ||    
T  37579129 caatatgctcactttaacatttgttagatggattgatttagttgctcatttaaatatcaatgataatttttataacatgacaattatcaaacaaaataac 37579228  T
Q  112 atgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| ||||  ||||||||||| ||||||||||| | ||| | ||||||||| ||| |||||||||||||||| |||||||    
T  37579229 atggcatagcaacataaagtaattttctgcatttgagacagctttgggtataggttcggggtgggtacctatatacccgt 37579308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 46127398 - 46127238
Alignment:
Q  20 tcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgacatgacata 119  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||||||||  |||| |||||||||||| ||||||||||    
T  46127398 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagttattataacacgacaatgatcaaacaaaataacatgacata 46127299  T
Q  120 ttaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    |   |||||| || ||||||||||| |||||||||||| ||||| |  ||| ||||||||||||    
T  46127298 t---cataaaataattttctgcatttgggacgggtttgagtatgagatcggtgtgggtacctat 46127238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 45379967 - 45380192
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | |||||||||||||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  45379967 tccaacaatacgctcactttaacatttgttagacgaactgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 45380066  T
Q  106 aatgacatgacatattaacataaagt-agttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| ||||||||| | |||||||||| | |||| | |||| |||||| |||| ||||||||| ||||||||||||||||       ||||||||||||||    
T  45380067 aataacatgacatgtcaacataaagtaatttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccata 45380166  T
Q  198 tccatgttttgaaatcggggaaaacc 223  Q
     || | ||||||||||||| ||||||    
T  45380167 cccgtattttgaaatcgggaaaaacc 45380192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 16866030 - 16866254
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||  || |||||||||||||  |||||||||| ||||   ||||||||||||||    
T  16866030 tccaacaataagctcactttcacatttgttagacaaaatgatttagttaatcatttaaatatcaatgatagtttttattaacatggcaattatcaaacaa 16866129  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||| ||||||||||||||||       |||| |||||||||     
T  16866130 aataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatac 16866229  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || |||||||| |||||||||||||    
T  16866230 ccgtgttttgagatcggggaaaacc 16866254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 45885997 - 45885774
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||| ||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  45885997 tccaacaataagctcactttcacatttgttagacaaaatgattaagttgatcctttaaatatcaatgatagtttttattaacatggcaattatcaaacaa 45885898  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| |||| |||||| ||||||||||| |||| | |||| ||||||| ||| ||||||||| ||||||||||||||||       ||||||||||||||     
T  45885897 aataacataacatatcaacataaagtaattttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatac 45885798  T
Q  199 ccatgttttgaaatcggggaaaac 222  Q
    || |||||||| ||||||||||||    
T  45885797 ccgtgttttgagatcggggaaaac 45885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 37182136 - 37182296
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    ||||||||||||||||||||||||||||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  37182136 tccaacaatatgttcactttaacatttgttagacacaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37182235  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| ||||||||||| |||||||  || |||| | |||| ||||||||| |||||||||||    
T  37182236 aataacatgacatatcaacataagataattttttacatttgggacgggtatgggtatgggt 37182296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 38140025 - 38139800
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||||||||||||||||| || | ||||||||| ||||||||||||||||  ||||||||| |||||   ||||||||||||||    
T  38140025 tccaacaatacgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 38139926  T
Q  106 aatgacatgacatattaacataaagt-agttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccata 197  Q
    ||| ||||||||||| || ||||| | | |||| | |||| | ||||||||||| ||||||| |||||||||||| |||       ||||||||||||||    
T  38139925 aataacatgacatatcaatataaaataatttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccata 38139826  T
Q  198 tccatgttttgaaatcggggaaaacc 223  Q
      | ||||||||||| ||||||||||    
T  38139825 ctcgtgttttgaaattggggaaaacc 38139800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 39456240 - 39456023
Alignment:
Q  12 caatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacat--caattatcaaacaaaatg 109  Q
    ||||||| |||||||||||||||||||||  | | ||||| ||| |||||  ||||||||| ||| ||||||| || |||  |||||||||||||||||     
T  39456240 caatatgctcactttaacatttgttagacgtaatgatttaattgatccttccaatatcaatggtaatttttattac-catggcaattatcaaacaaaata 39456142  T
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccat 202  Q
    ||||||||||| ||||||||||| |||| | |||| ||||||||| || |||| ||| ||||||||||||||||       |||||||||||||| ||||    
T  39456141 acatgacatatcaacataaagtaatttt-tacatttgggacgggtatgagtat-ggttcggggtgggtacctatatacccgttacccgtcccatacccat 39456044  T
Q  203 gttttgaaatcggggaaaacc 223  Q
    |||||||||||||||||||||    
T  39456043 gttttgaaatcggggaaaacc 39456023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 44794259 - 44794084
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| || ||||| ||||||| |||||||||| |||||   ||||||||||||||    
T  44794259 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcatttaagtatcaatggtagtttttagtaacatgacaattatcaaacaa 44794160  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacct 181  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||| ||||||||||||||| ||||||||||||||    
T  44794159 aataacataacatatcaacataaaataattttttacatttgggacaggtttgggtatgggttcggggtgggtacct 44794084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 38152763 - 38152972
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||||||||| | ||||||||||||||||||||| || | ||||||||| ||||||| |||||||| |||||              ||||||||||||||    
T  38152763 tccaacaatacgctcactttaacatttgttagacggaatgatttagttgatcctttagatatcaatggtagt--------------aattatcaaacaaa 38152848  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||||||||| |||||||| || |||| | |||| ||||||||||| ||||||||| ||||||||||||||||       ||| |||| ||||| |    
T  38152849 ataacatgacatatcaacataaaataattttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacc 38152948  T
Q  200 catgttttgaaatcggggaaaacc 223  Q
    ||||||||||||||||||||||||    
T  38152949 catgttttgaaatcggggaaaacc 38152972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 183
Target Start/End: Original strand, 17851755 - 17851892
Alignment:
Q  47 atttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattc 145  Q
    ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||||| |||| |||||| |||||||||||||||| | ||||     
T  17851755 atttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacattt 17851854  T
Q  146 gggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    |||| |||||||||||||||| |||| |||||||||||    
T  17851855 gggatgggtttgggtatgggttcgggatgggtacctat 17851892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 23328477 - 23328641
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaatgaca 112  Q
    |||||| |||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||  || |||||||| |||  ||||||||||||||||| |||    
T  23328477 aatatgctcactttagcatttattagaccgattgatttagttattcctttaaatatcaatgataatttttatagcacgacaattatcaaacaaaataaca 23328576  T
Q  113 tgacatattaacat-aaagtagttttctgcattcgggacgggtttgggtatgggtccggggtggg 176  Q
     ||||| | ||||| ||| || |||||| |||||||||||||||||||||| ||  |||||||||    
T  23328577 agacatgtcaacataaaaataattttctccattcgggacgggtttgggtataggatcggggtggg 23328641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 44986130 - 44985984
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  44986130 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44986031  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggt 154  Q
    ||| |||| |||||| |||||||| || |||| | |||| |||||||||    
T  44986030 aataacat-acatatcaacataaa-taattttttacatttgggacgggt 44985984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 37196230 - 37196047
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    ||||| |||| | ||||||||||||||||||||| || | ||||||||| || |||| |||||||| ||||||||||| ||||   || |||||||||||    
T  37196230 tccaataatacgctcactttaacatttgttagacggaatgatttagttgatcttttatatatcaatggtagtttttattaacatgacagttatcaaacaa 37196131  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttaccc 189  Q
    ||| |||| |||||| ||||||||||| |||| | ||||   ||||||||||||||||| | ||||||||||| |||| |||||    
T  37196130 aataacataacatatcaacataaagtaattttttacatttatgacgggtttgggtatggattcggggtgggtagctatataccc 37196047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 44658639 - 44658496
Alignment:
Q  49 ttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgg 147  Q
    ||||||| |||||||||||||||| ||||||||||| ||||   ||||||||||||||||| ||||||||||| |||||||| || |||| | |||| ||    
T  44658639 ttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaatatttttttacatttgg 44658540  T
Q  148 gacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
     |||||||||||||||||| |||| | ||||||||| |||||||    
T  44658539 tacgggtttgggtatgggttcgggataggtacctatatacccgt 44658496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 25905489 - 25905674
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||| | |||| || |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||||||||    
T  25905489 tccaacaataagctcaccttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 25905588  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacg-ggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| |||| |||||| |||||||| || |||| | |||| ||||||  ||||||||||| || |||||| ||||||||| |||||||    
T  25905589 aataacataacatatcaacataaaataattttttacatttgggacgatgtttgggtatgagttcggggt-ggtacctatgtacccgt 25905674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 24753037 - 24753196
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| || ||||||||||||| ||||||||||| ||||   ||||||||||||||    
T  24753037 tccaacaataagctcactttcacatttgttagacaaaataatttagttgatc-tttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 24753135  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| |||| |||||| |||||||| || |||| | |||| |||||||||||||||||||||    
T  24753136 aataacataacatatcaacataaaataattttttacatttgggacgggtttgggtatgggt 24753196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 44734589 - 44734406
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| || |||||| |||||||||||  | | ||||| ||| ||||| ||||||||||  |||||||||| ||||   ||||||||||| ||    
T  44734589 tccaccaatatgctcgctttaatatttgttagacgtaatgatttaattgatccttcaaatatcaatgatagtttttattaacatgacaattatcaaataa 44734490  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttaccc 189  Q
    ||| ||||||||||| ||||||||||| |||| | |||| ||||||| | || |||||||| |||||||||||||||| |||||    
T  44734489 aataacatgacatatcaacataaagtaattttttacatttgggacggatatgtgtatgggttcggggtgggtacctatataccc 44734406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 41741681 - 41741458
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||| |||||||||||||||||||||  | | ||||| ||| ||| |||||||||||| |||||||||| |||||    |||||||||||||    
T  41741681 tccaacaatatgctcactttaacatttgttagacgtaatgatttaattgatccgttaaatatcaatggtagtttttattaacatgataattatcaaacaa 41741582  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtaccta-------tttacccgtcccatat 198  Q
    ||| ||||||||||| |  |||||||| |||| | |||| ||||||||| ||  ||||||| | |||||||||||||        ||| ||||| ||||     
T  41741581 aataacatgacatatcagtataaagtaattttttacatttgggacgggtatgaatatgggttc-gggtgggtacctacatacccgttatccgtctcatac 41741483  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    || ||||||||||||||||||||||    
T  41741482 ccgtgttttgaaatcggggaaaacc 41741458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 268
Target Start/End: Original strand, 16811635 - 16811860
Alignment:
Q  51 agttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcggga 149  Q
    ||||| || ||||||||||||| ||||||||||| ||||   ||||||||||||||||| |||| | |||| ||||||||||| |||| | |||| ||||    
T  16811635 agttgatcttttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataatatatcaacataaagtaattttttacatttggga 16811734  T
Q  150 cgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggg 242  Q
    ||| ||||||||||||| | ||||||||| ||||       ||| ||||| |||| || |||||||| ||||||||||| | |||| ||||||||| ||     
T  16811735 cggctttgggtatgggttc-gggtgggtatctatatacccattatccgtctcatacccgtgttttgagatcggggaaaatccaaactcagtcaaaatgga 16811833  T
Q  243 gaaaacccgtc-aattgagtttggttc 268  Q
    ||||||| ||| ||||||||| |||||    
T  16811834 gaaaacctgtcaaattgagttaggttc 16811860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 45709094 - 45708912
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||| ||||||| || |   ||||||||||||||    
T  45709094 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtaatttttattaatatgacaattatcaaacaa 45708995  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacccgt 191  Q
    ||| | || |||||| |||||||||||   || | ||||  |||||||||| |||||| || |||||||||||||||| |||||||    
T  45708994 aataatataacatatcaacataaagta---ttttacattttggacgggtttaggtatgagttcggggtgggtacctatatacccgt 45708912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 39316856 - 39317169
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||| ||||||| |||||||||||||||||||||  | | ||||| | | ||||| |||||||||| ||||||||||| ||||   ||||||||||||||    
T  39316856 tccaccaatatgctcactttaacatttgttagacgtaatgatttaatcgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaa 39316955  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||||| |||||||| || |||| | |||| | ||||| | |||||||| || | || ||| ||| |||        |||||||||||||     
T  39316956 aataacatgacatatcaacataaaataattttttacatttgagacggatatgggtatgagttcaggatggatacatatatacccgctacccgtcccatac 39317055  T
Q  199 ccatgttttgaaatcggggaaaac------------ctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacggg 285  Q
    || ||||||||||||| |||||||            | |||||||||||||| |||||||||||||| ||||||||||||||| |  |||||||| || |    
T  39317056 ccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcggataaccgcgag 39317155  T
Q  286 tatggatattgttg 299  Q
    |||| || ||||||    
T  39317156 tatgaattttgttg 39317169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 26004752 - 26004675
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  26004752 tccaacaatatgctcattttaacatttgttagaccgattgatttagtcgctcctttaaatatcaatggtagtttttat 26004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 41103528 - 41103741
Alignment:
Q  21 cactttaacatttgttagaccgatttatttagttgctcctttaaatatca---atagtagtttttat-aacacatcaattatcaaacaaaatgacatgac 116  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||||||   || ||| ||| ||| ||||   ||||||||||||||||| ||| ||     
T  41103528 cactttaacatttgttagacggaatgatttagttgatcctttaaatatcatcaatggtaatttgtattaacatgacaattatcaaacaaaataacaagag 41103627  T
Q  117 atattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttga 209  Q
    |||| |||||||| || |||| | ||||  ||||||||||  |||||||| |||||||||||| |||       ||| |||||||||| || ||||||||    
T  41103628 atatcaacataaaataattttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttga 41103727  T
Q  210 aatcggggaaaacc 223  Q
    ||||||||||||||    
T  41103728 aatcggggaaaacc 41103741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 3227092 - 3226954
Alignment:
Q  92 caattatcaaacaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------t 184  Q
    ||||||||||||||||| ||||||||||| |||||||| || |||| | |||| |||| | || || |||||||| ||||||||||||||||       |    
T  3227092 caattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggatgtgtatgagtatgggttcggggtgggtacctatattcctgt 3226993  T
Q  185 tacccgtcccatatccatgttttgaaatcggggaaaacc 223  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  3226992 tacccgtcccatacccgtgttttgaaatcggggaaaacc 3226954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 5916280 - 5916196
Alignment:
Q  24 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaat 108  Q
    |||||||||||||||||||||| ||| | || ||||||||||||||||| |||||||| |||||||| |||||||||||||||||    
T  5916280 tttaacatttgttagaccgattgattgatttactcctttaaatatcaatggtagttttgataacacagcaattatcaaacaaaat 5916196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 23475360 - 23475225
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagt 233  Q
    |||||||||||||||||||||||||| ||  |||||||| |||       |||||| ||||| | || ||||||||||||||| |||||| |||||||||    
T  23475360 cattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcgggaaaaacccaaacccagt 23475261  T
Q  234 caaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    ||||  |||||||||||||| |||||||||||||||    
T  23475260 caaagcggggaaaacccgtcaaattgagtttggttc 23475225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 43507294 - 43507530
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaa---- 101  Q
    |||||||||||| ||||||||| ||||||||||| || | ||||||||| || ||||||||||||| ||||||||||| || |   ||||||||||        
T  43507294 tccaacaatatgctcactttaaaatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaatatgacaattatcaaacaa 43507393  T
Q  102 --------acaaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------tta 186  Q
            ||||||| ||||||||||| |||||||| || |||| | |||| |||||| || | ||||||||| | |||||||| |||||       |||    
T  43507394 aataacatacaaaataacatgacatatcaacataaaataattttttacatttgggacgagtataggtatgggttcagggtgggtgcctatatacccgtta 43507493  T
Q  187 cccgtcccatatccatgttttgaaatcggggaaaacc 223  Q
    |||||| |||| |||||||||||||||||||||||||    
T  43507494 cccgtctcatacccatgttttgaaatcggggaaaacc 43507530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 10072431 - 10072640
Alignment:
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccat 202  Q
    ||||||||||| ||||||||||| |||| | |||| ||||||| | ||||||||||| ||||||||||||||||       |||||||| ||||| || |    
T  10072431 acatgacatatcaacataaagtaattttttacatttgggacggttatgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgt 10072530  T
Q  203 gttttgaaatcggggaaaaccta------------aacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    ||||||||||||||||||||| |            ||||||||||||| |||||||||||||| ||||| ||||||||| |  || ||||| ||||||||    
T  10072531 gttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatg 10072630  T
Q  290 gatattgttg 299  Q
    | | ||||||    
T  10072631 ggttttgttg 10072640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 25980149 - 25979925
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat-aacacatcaattatcaaacaa 105  Q
    |||||||||| |  |||||||||||||||||||| || | ||||| ||  ||||||||||||||||   ||||||||| ||||    |||||||||||||    
T  25980149 tccaacaatacgcacactttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagtttttattaacatgataattatcaaacaa 25980050  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatat 198  Q
    ||| ||||||||| | |||||||| || |||| | |||| || | || |||||||||| ||  ||||||||||| |||       ||||||||| ||||     
T  25980049 aataacatgacatttcaacataaaataattttttacatttggaaaggatttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatac 25979950  T
Q  199 ccatgttttgaaatcggggaaaacc 223  Q
    |  ||||||||||||||||||||||    
T  25979949 ctgtgttttgaaatcggggaaaacc 25979925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 3227775 - 3227698
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    |||||||||||| |||||| |||||||||||||| || | ||||||||| |||||||||||||||| |||||||||||    
T  3227775 tccaacaatatgctcacttcaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttat 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 3157084 - 3157176
Alignment:
Q  146 gggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaaccca 231  Q
    ||||||||||||||||| ||| ||| ||||||||||||       ||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  3157084 gggacgggtttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaaccca 3157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 299
Target Start/End: Complemental strand, 23533700 - 23533535
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtc 234  Q
    ||||||||||| |||||||||||||| ||  |||||||| |||      |||||| || |||| || | |||| ||||||||||||||| ||||||||||    
T  23533700 cattcgggacgagtttgggtatgggttcgaagtgggtacatatatcccattacccatcgcatacccgtattttcaaatcggggaaaacccaaacccagtc 23533601  T
Q  235 aaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||  ||| |||||||||| ||||| ||||||||| |  || || || ||||||||||| ||||||    
T  23533600 aaatcgggaaaaacccgtcaaattgggtttggttcgggagggtacccgcgggtatggattttgttg 23533535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 19440107 - 19439972
Alignment:
Q  141 cattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatccatgttttgaaatcggggaaaacctaaacccagt 233  Q
    |||||||||||||||||||||||||| ||  |||||||| |||       |||||| ||||| | || |||||| ||||| ||||||||  |||||||||    
T  19440107 cattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttcaaatcagggaaaactcaaacccagt 19440008  T
Q  234 caaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    ||||  |||||||||||||| ||||| |||||||||    
T  19440007 caaagcggggaaaacccgtcaaattgggtttggttc 19439972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 10072350 - 10072425
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttt 82  Q
    |||||| ||||| ||||||||||||||||||| | || | ||||||||| || ||||| ||||||| |||||||||    
T  10072350 tccaacgatatgctcactttaacatttgttaggcggaatgatttagttgatcatttaattatcaatggtagttttt 10072425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 18825860 - 18825785
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| || || |||||| |||||||| | ||||||    
T  18825860 aaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggttaaccatgggtatgggttttgttg 18825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 24753262 - 24753337
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtcaa-ttgagtttggttcagatggataaccacgggtatggatattgttg 299  Q
    |||||||||||||| || ||||| ||||||| |||| |||||||| || || ||||||||||||||| | ||||||    
T  24753262 aaacccagtcaaaacggagaaaatccgtcaaattgaatttggttcggacgggtaaccacgggtatgggttttgttg 24753337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 27896522 - 27896475
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaaccca 231  Q
    |||||||||||||| ||||||||||||||  ||||||||| |||||||    
T  27896522 ttacccgtcccatacccatgttttgaaataagggaaaacccaaaccca 27896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 3274807 - 3274761
Alignment:
Q  110 acatgacatattaacataaagtagttttctgcattcgggacgggttt 156  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||||||||    
T  3274807 acatgacatatcaacataatgtaattttctacattcgggacgggttt 3274761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 33841124 - 33841162
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaac 222  Q
    |||||||||||||| || |||||||||||||||||||||    
T  33841124 ttacccgtcccatacccgtgttttgaaatcggggaaaac 33841162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 12980476 - 12980541
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccg-tcaattgagtttggttcagatggataaccacgggtatg 289  Q
    |||||||||||||| |||||||||||| | |||||||||||||||    || ||||||||||||||    
T  12980476 aaacccagtcaaaatggggaaaacccgttaaattgagtttggttctagcgggtaaccacgggtatg 12980541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 16866268 - 16866333
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| |  || ||||||||| ||||    
T  16866268 aaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatg 16866333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 21750830 - 21750899
Alignment:
Q  186 acccgtcccatatccatgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    ||||||| ||||||| | ||||||||||||| |||||||||||||  |||||  ||  ||||||||||||    
T  21750830 acccgtctcatatccgtattttgaaatcgggaaaaacctaaacccgatcaaatcggaaaaaacccgtcaa 21750899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 43507544 - 43507609
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    |||||||||||||| ||||||||||| || ||||| |||||||||||| || ||||| ||| ||||    
T  43507544 aaacccagtcaaaacggggaaaacccatcaaattgggtttggttcagacgggtaaccgcggatatg 43507609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 43550446 - 43550393
Alignment:
Q  202 tgttttgaaatcggggaaaacctaaacccagtcaaaaaggggaaaacccgtcaa 255  Q
    |||||| ||| ||||||||||  ||||||| |||||| ||||||||||||||||    
T  43550446 tgttttaaaaacggggaaaactcaaacccaatcaaaatggggaaaacccgtcaa 43550393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 10995881 - 10995837
Alignment:
Q  184 ttacccgtcccatatccatgttttgaaatcggggaaaacctaaac 228  Q
    |||||||||||||| || ||| |||||||||||||||||| ||||    
T  10995881 ttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaac 10995837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 32546182 - 32546226
Alignment:
Q  135 tttctgcattcgggacgggtttgggtatgggtccggggtgggtac 179  Q
    ||||| ||||||||  |||||||||||||||| ||||||||||||    
T  32546182 tttctacattcgggtagggtttgggtatgggttcggggtgggtac 32546226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 37182373 - 37182413
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttg 264  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  37182373 aaacccagtcaaaacggggaaaacccgtcaaattgagtttg 37182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 37218104 - 37218148
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttc 268  Q
    |||||||||||||| ||||||||||| || |||||||||||||||    
T  37218104 aaacccagtcaaaacggggaaaacccatcaaattgagtttggttc 37218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 90454 - 90750
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||  ||||||||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||||||||||||| |||||||    
T  90454 tccagcaatatactcactttaatatttgttagaccgattgatttatttgctcctttaaatatcaatggttgttttaataacacatcaattattaaacaaa 90553  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat-------ttacccgtcccatatc 199  Q
    || ||||| ||||| |||||||| || |||||||||||| |||||  |||| |||||||| ||||| ||||||| ||       ||| ||||| |||| |    
T  90554 ataacatggcatatcaacataaaataattttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacc 90653  T
Q  200 catgttttgaaatcggggaaa------acctaaacccagtcaaaaaggggaaaacccgtc-aattgagtttggttcagatggataaccacgggtatg 289  Q
    | |||||||||||||||||||      ||| |||||||||||||| |||||||| ||||| |||||||||| |||| |  || ||||||||||||||    
T  90654 cgtgttttgaaatcggggaaaacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttagttcgggcgggtaaccacgggtatg 90750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 183
Target Start/End: Complemental strand, 197558 - 197382
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||| ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||    
T  197558 tccagcaaaatgctcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatggtagtttttataacaaggtaattatcaaacaaa 197459  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctat 183  Q
    || ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| | | |||  |||||||||||    
T  197458 ataacatggcatatcaacataaagtaattttctgcattcgggacgggtttgggtatagattcggtttgggtacctat 197382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 14632 - 14814
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||    
T  14632 tccagcaatatgctcactttaacatttgttaaaccgattgatttagttgctcctttaaatatcaatggtagtttttacaacacaataattatcaaacaaa 14731  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttaccc 189  Q
    || | ||  ||||| ||||| || || |||||| |||| |||||| ||||||||||| || |  ||||||||||||| |||||    
T  14732 ataatatatcatatcaacattaaataattttctacatttgggacgagtttgggtatgtgttcaaggtgggtacctatataccc 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 36012 - 36167
Alignment:
Q  7 tccaacaatatgttcacttt-aacatttgttagaccgatttatttagttgct--cctttaaatatcaatagtagtttttataacacatcaattatcaaac 103  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||  || |||||||||    
T  36012 tccaacaatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaac 36111  T
Q  104 aaaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatg 163  Q
    ||||| |||||||||||||    |  ||| ||||||||||||||||||||||||| ||||    
T  36112 aaaataacatgacatatta----atggtaattttctgcattcgggacgggtttggttatg 36167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 4113 - 4274
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||  || | ||||||||||||||||||||||||||  ||||||||| |||||   ||||||||||||||    
T  4113 tccaacaatatgttcactttaacatttgttagatggaatgatttagttgctcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 4212  T
Q  106 aatgacatgacatattaacataaagta-gttttctgcattcgggacgggtttgggtatgggt 166  Q
    ||| ||||||||||| |||||||||||  |||| | |||| |||||| ||||||||||||||    
T  4213 aataacatgacatatcaacataaagtattttttttacatttgggacgagtttgggtatgggt 4274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 6263 - 6412
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 106  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| |||||||| |||  ||| |||||||||||    
T  6263 tccagcaatatgttcactttaacatttgttagatcgattgatttagttgctcctttaaatttcaatggtaatttttatagcacgacaactatcaaacaaa 6362  T
Q  107 atgacatgacatattaacataaagtagttttctgcattcgggacgggttt 156  Q
    || ||||| ||||| |||||||||||  |||||||||| | |||||||||    
T  6363 ataacatggcatatcaacataaagtaactttctgcatttgagacgggttt 6412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 7798 - 7866
Alignment:
Q  233 tcaaaaaggggaaaacccgtcaa-ttgagtttggttcagatggataaccacgggtatggatattgttgg 300  Q
    |||||| |||||||||||||||| || | ||| |||| | ||| ||||||||||||||||| |||||||    
T  7798 tcaaaacggggaaaacccgtcaaattaaatttagttcgggtgggtaaccacgggtatggattttgttgg 7866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 33440 - 33603
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaa-ca- 104  Q
    |||||||||||||||||||||| |||||||| ||||| | ||||| ||||| |||||||||||||| ||||||||||||||||   |||||||||| ||     
T  33440 tccaacaatatgttcactttaatatttgttacaccgactgatttaattgcttctttaaatatcaatggtagtttttataacacgaaaattatcaaatcaa 33539  T
Q  105 --aaatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggt 166  Q
      |||| ||||| ||||| | ||||||||||||||||||||| | ||||||||||| |||||||    
T  33540 ataaataacatggcatatcatcataaagtagttttctgcatttgtgacgggtttggttatgggt 33603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 14376 - 14295
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataaca 88  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||||||||    
T  14376 tccaacaatatgttcactttaacatttgttagaccgattgatttaattgttcctttaaatatcaatggtagtttttataaca 14295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 10157 - 10335
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatcaaacaa 105  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||    |  |||||||||| ||| |   ||||||||||||||    
T  10157 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat---gacggtagtttttattaatatgacaattatcaaacaa 10253  T
Q  106 aatgacatgacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggtccggggtgggtacctatttacc 188  Q
    ||| |||| |||||| |||| |||||| |||| | |||| ||||||||| ||||||||||| ||  |||||||||||| ||||    
T  10254 aataacat-acatatcaacacaaagtaattttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacc 10335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0902 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 748 - 823
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataaca 88  Q
    |||||||||||| |||||||| || || ||| | |||| |||||| |||||||||||||| |||| ||||||||||    
T  748 aatatgttcactataacatttctttgatcgaatgatttggttgctactttaaatatcaatggtaggttttataaca 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1630 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 1479 - 1544
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaat 72  Q
    |||||||||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||    
T  1479 tccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaat 1544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 32761 - 32685
Alignment:
Q  7 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttat 84  Q
    |||||||||||| ||||||||||||||||||||| || | ||||| ||| | | |||||||||| | |||||||||||    
T  32761 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcactggtagtttttat 32685  T

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Target: scaffold0795 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 318 - 361
Alignment:
Q  225 aaacccagtcaaaaaggggaaaacccgtcaattgagtttggttc 268  Q
    |||| ||||||||| || ||||||||||||||||||||||||||    
T  318 aaactcagtcaaaacggagaaaacccgtcaattgagtttggttc 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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