View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1343_low_124 (Length: 321)

Name: NF1343_low_124
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1343_low_124
NF1343_low_124
[»] chr3 (71 HSPs)
chr3 (5-255)||(41850485-41850734)
chr3 (2-143)||(23525225-23525366)
chr3 (2-143)||(47895253-47895394)
chr3 (2-136)||(44676321-44676455)
chr3 (2-132)||(45213642-45213772)
chr3 (2-136)||(30431220-30431353)
chr3 (5-140)||(45566902-45567034)
chr3 (2-134)||(39359020-39359152)
chr3 (2-133)||(33193950-33194081)
chr3 (2-136)||(38363891-38364025)
chr3 (5-136)||(2458111-2458242)
chr3 (6-136)||(36460909-36461039)
chr3 (2-136)||(51398110-51398244)
chr3 (19-138)||(36729686-36729805)
chr3 (5-136)||(41287412-41287543)
chr3 (2-140)||(11393645-11393783)
chr3 (2-132)||(31853482-31853612)
chr3 (5-143)||(47138068-47138206)
chr3 (2-107)||(38016474-38016579)
chr3 (5-107)||(30426268-30426370)
chr3 (2-116)||(33024236-33024350)
chr3 (53-143)||(54933115-54933205)
chr3 (19-133)||(3152726-3152840)
chr3 (6-136)||(50088232-50088362)
chr3 (6-107)||(45518429-45518530)
chr3 (3-136)||(53200597-53200730)
chr3 (2-143)||(13756786-13756923)
chr3 (53-136)||(2988527-2988610)
chr3 (7-98)||(36381326-36381417)
chr3 (2-132)||(45391878-45392007)
chr3 (2-133)||(51482035-51482167)
chr3 (2-136)||(39168806-39168932)
chr3 (2-97)||(32492138-32492231)
chr3 (2-136)||(35557669-35557808)
chr3 (53-143)||(32303815-32303905)
chr3 (53-149)||(20512400-20512496)
chr3 (53-133)||(36541644-36541724)
chr3 (2-58)||(50346724-50346780)
chr3 (54-137)||(44645493-44645576)
chr3 (54-136)||(49470926-49471008)
chr3 (53-136)||(43687800-43687883)
chr3 (53-136)||(54261568-54261651)
chr3 (53-114)||(25722400-25722461)
chr3 (2-58)||(8817240-8817296)
chr3 (2-58)||(30315409-30315465)
chr3 (53-136)||(53560817-53560900)
chr3 (54-132)||(42006983-42007061)
chr3 (53-143)||(51381877-51381967)
chr3 (81-138)||(2567929-2567986)
chr3 (2-58)||(19373685-19373741)
chr3 (85-145)||(25061876-25061936)
chr3 (2-58)||(36844737-36844793)
chr3 (85-137)||(43599466-43599518)
chr3 (53-128)||(43169487-43169562)
chr3 (2-58)||(30934804-30934860)
chr3 (81-149)||(44854492-44854560)
chr3 (81-145)||(45095709-45095773)
chr3 (2-58)||(48903385-48903441)
chr3 (85-136)||(4476281-4476332)
chr3 (85-144)||(15514646-15514705)
chr3 (85-136)||(31290893-31290944)
chr3 (85-136)||(42740405-42740456)
chr3 (85-136)||(44648329-44648380)
chr3 (90-140)||(35099290-35099340)
chr3 (4-58)||(38141051-38141105)
chr3 (85-143)||(42791479-42791537)
chr3 (110-143)||(51057669-51057702)
chr3 (2-58)||(9189430-9189486)
chr3 (80-132)||(38277930-38277982)
chr3 (2-58)||(40487927-40487983)
chr3 (2-50)||(42072084-42072132)
[»] chr7 (58 HSPs)
chr7 (2-136)||(37815824-37815958)
chr7 (3-136)||(10599464-10599597)
chr7 (2-136)||(1742091-1742225)
chr7 (2-126)||(24680228-24680352)
chr7 (2-136)||(35777919-35778053)
chr7 (5-133)||(13405047-13405175)
chr7 (4-143)||(27947411-27947550)
chr7 (2-136)||(31418430-31418564)
chr7 (2-143)||(27935867-27936008)
chr7 (2-133)||(22298096-22298232)
chr7 (2-134)||(29530854-29530986)
chr7 (2-136)||(23935521-23935655)
chr7 (2-132)||(42879855-42879985)
chr7 (7-136)||(44453238-44453367)
chr7 (2-138)||(45948545-45948681)
chr7 (6-144)||(23155371-23155509)
chr7 (2-133)||(48684823-48684954)
chr7 (6-136)||(45933506-45933636)
chr7 (18-143)||(7795153-7795278)
chr7 (5-128)||(41137832-41137954)
chr7 (2-107)||(36808034-36808139)
chr7 (53-136)||(19906565-19906648)
chr7 (56-136)||(6521973-6522053)
chr7 (31-138)||(8334209-8334316)
chr7 (53-143)||(36446981-36447071)
chr7 (55-136)||(16564720-16564801)
chr7 (55-136)||(16600861-16600942)
chr7 (53-136)||(32345753-32345836)
chr7 (53-136)||(39117407-39117490)
chr7 (2-58)||(47461370-47461426)
chr7 (53-136)||(36915520-36915603)
chr7 (5-58)||(34012559-34012612)
chr7 (5-58)||(45499820-45499873)
chr7 (2-58)||(21819382-21819438)
chr7 (2-58)||(29636222-29636278)
chr7 (5-58)||(6563414-6563467)
chr7 (55-128)||(19276543-19276616)
chr7 (5-58)||(28289317-28289370)
chr7 (5-58)||(40339561-40339614)
chr7 (2-58)||(19104997-19105053)
chr7 (2-58)||(25055881-25055937)
chr7 (53-133)||(31416672-31416752)
chr7 (19-58)||(10476252-10476291)
chr7 (53-143)||(10684741-10684831)
chr7 (53-143)||(26963632-26963722)
chr7 (85-139)||(33056200-33056254)
chr7 (5-51)||(48843655-48843701)
chr7 (86-143)||(5723170-5723227)
chr7 (2-58)||(8293064-8293120)
chr7 (2-58)||(21752107-21752163)
chr7 (6-58)||(40753425-40753477)
chr7 (2-58)||(47187751-47187807)
chr7 (2-58)||(24133124-24133182)
chr7 (85-136)||(40299021-40299072)
chr7 (85-143)||(715784-715842)
chr7 (88-143)||(6389569-6389626)
chr7 (5-58)||(37490890-37490943)
chr7 (106-143)||(39557277-39557314)
[»] chr2 (61 HSPs)
chr2 (2-136)||(12342193-12342327)
chr2 (2-136)||(441150-441284)
chr2 (2-136)||(4133122-4133256)
chr2 (8-143)||(25383397-25383532)
chr2 (2-133)||(29396602-29396733)
chr2 (2-136)||(16807436-16807570)
chr2 (2-136)||(16846717-16846851)
chr2 (5-144)||(29808916-29809055)
chr2 (6-148)||(8774156-8774298)
chr2 (6-148)||(8789337-8789479)
chr2 (5-132)||(42743131-42743256)
chr2 (5-99)||(34546104-34546198)
chr2 (2-128)||(38926706-38926832)
chr2 (2-107)||(19636608-19636713)
chr2 (2-107)||(19835201-19835306)
chr2 (2-101)||(6220358-6220457)
chr2 (5-136)||(30855208-30855339)
chr2 (19-138)||(42005007-42005126)
chr2 (2-114)||(32227952-32228064)
chr2 (2-132)||(13562094-13562223)
chr2 (2-136)||(36106322-36106456)
chr2 (18-136)||(42753863-42753981)
chr2 (3-132)||(12393842-12393971)
chr2 (53-136)||(25332722-25332805)
chr2 (2-143)||(45081818-45081953)
chr2 (2-136)||(18717176-18717310)
chr2 (2-133)||(4288635-4288764)
chr2 (53-134)||(14698140-14698221)
chr2 (53-129)||(39866596-39866673)
chr2 (53-145)||(38809849-38809941)
chr2 (53-149)||(43388563-43388659)
chr2 (53-132)||(775807-775886)
chr2 (2-58)||(18719430-18719486)
chr2 (2-58)||(37038767-37038823)
chr2 (53-136)||(2459925-2460008)
chr2 (85-136)||(42970071-42970122)
chr2 (2-59)||(1423291-1423348)
chr2 (5-58)||(8540141-8540194)
chr2 (2-58)||(10195774-10195830)
chr2 (2-58)||(33055990-33056046)
chr2 (85-149)||(40987188-40987252)
chr2 (2-50)||(43480875-43480923)
chr2 (2-58)||(43971588-43971644)
chr2 (52-134)||(10580777-10580859)
chr2 (85-139)||(34225932-34225986)
chr2 (5-58)||(4658229-4658282)
chr2 (2-58)||(7872774-7872830)
chr2 (2-58)||(11188247-11188303)
chr2 (2-58)||(27964222-27964278)
chr2 (2-58)||(36685739-36685794)
chr2 (2-58)||(40608603-40608659)
chr2 (53-136)||(4566040-4566123)
chr2 (7-58)||(27726417-27726468)
chr2 (4-51)||(27726545-27726592)
chr2 (106-145)||(40987417-40987456)
chr2 (78-132)||(1360343-1360397)
chr2 (20-58)||(17647013-17647051)
chr2 (5-55)||(19469628-19469678)
chr2 (53-143)||(33093519-33093609)
chr2 (99-136)||(14378167-14378204)
chr2 (53-93)||(41984571-41984610)
[»] chr5 (57 HSPs)
chr5 (2-136)||(42103982-42104116)
chr5 (2-134)||(39730046-39730178)
chr5 (5-136)||(6519080-6519211)
chr5 (2-143)||(14620405-14620547)
chr5 (2-136)||(3305927-3306062)
chr5 (5-132)||(8336330-8336457)
chr5 (2-132)||(42977996-42978126)
chr5 (6-136)||(26660858-26660988)
chr5 (6-136)||(26932451-26932581)
chr5 (2-143)||(2729698-2729839)
chr5 (2-131)||(34445952-34446080)
chr5 (2-128)||(14005992-14006118)
chr5 (2-128)||(39566283-39566409)
chr5 (2-143)||(42661852-42661993)
chr5 (5-136)||(39335122-39335253)
chr5 (2-136)||(34972569-34972703)
chr5 (7-132)||(27600499-27600624)
chr5 (2-101)||(4425074-4425173)
chr5 (5-136)||(21375569-21375700)
chr5 (5-136)||(29807233-29807364)
chr5 (5-136)||(13761823-13761952)
chr5 (53-128)||(793531-793606)
chr5 (5-143)||(39504828-39504966)
chr5 (53-132)||(4833559-4833638)
chr5 (53-143)||(27652231-27652321)
chr5 (53-137)||(42329462-42329546)
chr5 (53-132)||(29653435-29653514)
chr5 (53-136)||(36296051-36296134)
chr5 (6-58)||(7579591-7579643)
chr5 (2-58)||(34534458-34534514)
chr5 (2-58)||(36164986-36165042)
chr5 (86-136)||(24436459-24436509)
chr5 (5-58)||(4911112-4911165)
chr5 (2-58)||(843117-843173)
chr5 (2-58)||(1309356-1309412)
chr5 (85-133)||(4751452-4751500)
chr5 (52-132)||(32962931-32963011)
chr5 (81-136)||(4371529-4371584)
chr5 (2-57)||(11977687-11977742)
chr5 (7-62)||(21319305-21319360)
chr5 (2-58)||(28591620-28591680)
chr5 (85-143)||(38982066-38982124)
chr5 (2-51)||(7748902-7748951)
chr5 (85-133)||(4742188-4742236)
chr5 (6-58)||(27797881-27797933)
chr5 (2-50)||(38362143-38362191)
chr5 (85-136)||(33693913-33693964)
chr5 (53-136)||(33822420-33822503)
chr5 (86-136)||(8960954-8961004)
chr5 (5-58)||(13974376-13974429)
chr5 (106-143)||(42978227-42978264)
chr5 (2-58)||(7721194-7721250)
chr5 (2-58)||(7736473-7736529)
chr5 (2-58)||(14161898-14161954)
chr5 (2-58)||(15167009-15167065)
chr5 (85-133)||(36660608-36660656)
chr5 (6-58)||(41645339-41645391)
[»] chr8 (49 HSPs)
chr8 (6-143)||(4760471-4760608)
chr8 (2-137)||(40228674-40228809)
chr8 (2-128)||(31899175-31899301)
chr8 (2-136)||(39463358-39463491)
chr8 (2-133)||(39698588-39698719)
chr8 (2-136)||(9304553-9304686)
chr8 (2-136)||(9880420-9880554)
chr8 (2-128)||(29025676-29025802)
chr8 (2-143)||(43448816-43448957)
chr8 (2-128)||(4989578-4989704)
chr8 (5-107)||(17921060-17921162)
chr8 (2-132)||(43084550-43084680)
chr8 (2-104)||(44713634-44713736)
chr8 (2-83)||(36669766-36669847)
chr8 (2-134)||(7839558-7839687)
chr8 (53-134)||(8471409-8471490)
chr8 (2-129)||(31693545-31693675)
chr8 (53-136)||(34168131-34168214)
chr8 (5-95)||(5790606-5790696)
chr8 (53-143)||(14541658-14541748)
chr8 (53-143)||(27416653-27416743)
chr8 (78-143)||(8382399-8382464)
chr8 (53-139)||(18673015-18673101)
chr8 (53-134)||(34461503-34461584)
chr8 (2-58)||(43970049-43970105)
chr8 (4-58)||(9812274-9812328)
chr8 (85-143)||(41415014-41415072)
chr8 (2-58)||(34156634-34156690)
chr8 (6-58)||(34796679-34796731)
chr8 (2-51)||(14234220-14234269)
chr8 (5-58)||(15750327-15750380)
chr8 (2-58)||(514976-515032)
chr8 (2-58)||(6374512-6374568)
chr8 (53-132)||(32271661-32271738)
chr8 (2-58)||(40399875-40399931)
chr8 (2-58)||(41679411-41679467)
chr8 (2-50)||(42179194-42179242)
chr8 (81-136)||(9022574-9022629)
chr8 (53-136)||(11168834-11168917)
chr8 (53-112)||(13109139-13109198)
chr8 (2-49)||(29312197-29312244)
chr8 (81-136)||(36915543-36915598)
chr8 (85-132)||(39970498-39970545)
chr8 (109-143)||(14234382-14234416)
chr8 (85-143)||(32326637-32326695)
chr8 (5-58)||(5295403-5295456)
chr8 (2-58)||(13496337-13496393)
chr8 (119-147)||(37185567-37185595)
chr8 (2-58)||(43561422-43561478)
[»] chr4 (68 HSPs)
chr4 (2-143)||(27653774-27653915)
chr4 (2-143)||(53814413-53814554)
chr4 (2-136)||(52957713-52957847)
chr4 (2-146)||(37654509-37654654)
chr4 (2-143)||(2728314-2728455)
chr4 (5-136)||(50623187-50623318)
chr4 (2-143)||(54042098-54042240)
chr4 (2-143)||(2493202-2493343)
chr4 (5-138)||(40010793-40010926)
chr4 (2-151)||(41920217-41920366)
chr4 (8-136)||(39984923-39985051)
chr4 (5-136)||(24940983-24941114)
chr4 (2-133)||(45043514-45043645)
chr4 (2-144)||(1819662-1819804)
chr4 (2-136)||(52847977-52848111)
chr4 (2-143)||(29519441-29519582)
chr4 (2-136)||(19878748-19878882)
chr4 (2-140)||(19930814-19930951)
chr4 (2-128)||(28734698-28734824)
chr4 (2-136)||(49080400-49080534)
chr4 (2-143)||(18430089-18430230)
chr4 (6-107)||(29370707-29370808)
chr4 (2-143)||(56373491-56373632)
chr4 (2-114)||(20448139-20448251)
chr4 (2-136)||(42605672-42605806)
chr4 (2-132)||(49089563-49089693)
chr4 (7-136)||(40345270-40345399)
chr4 (2-143)||(38991679-38991818)
chr4 (53-143)||(24259760-24259850)
chr4 (2-102)||(52253948-52254048)
chr4 (2-136)||(34316322-34316454)
chr4 (2-132)||(44571792-44571922)
chr4 (53-143)||(55126646-55126736)
chr4 (53-137)||(45889712-45889796)
chr4 (53-136)||(47321294-47321377)
chr4 (52-144)||(51434169-51434261)
chr4 (53-137)||(19282329-19282413)
chr4 (53-149)||(34124444-34124540)
chr4 (53-143)||(28116394-28116484)
chr4 (53-136)||(17499637-17499720)
chr4 (55-149)||(6462165-6462259)
chr4 (53-134)||(4408099-4408180)
chr4 (53-128)||(34534021-34534096)
chr4 (53-136)||(54233965-54234048)
chr4 (78-132)||(30022239-30022293)
chr4 (5-50)||(30780029-30780074)
chr4 (52-89)||(31941706-31941743)
chr4 (5-89)||(40837235-40837317)
chr4 (5-58)||(45839740-45839793)
chr4 (2-51)||(50203173-50203222)
chr4 (2-58)||(10573156-10573212)
chr4 (5-58)||(8971145-8971198)
chr4 (2-58)||(30261358-30261414)
chr4 (2-58)||(44868253-44868309)
chr4 (2-58)||(52162203-52162259)
chr4 (81-136)||(29840230-29840285)
chr4 (81-136)||(30492895-30492950)
chr4 (53-140)||(55548136-55548223)
chr4 (85-143)||(22212520-22212578)
chr4 (101-138)||(31987490-31987527)
chr4 (85-138)||(32140796-32140849)
chr4 (2-59)||(46392063-46392120)
chr4 (5-58)||(47817841-47817894)
chr4 (2-58)||(11364325-11364381)
chr4 (2-58)||(19451206-19451262)
chr4 (85-133)||(36805376-36805423)
chr4 (111-151)||(45043759-45043799)
chr4 (85-133)||(45049878-45049926)
[»] chr1 (66 HSPs)
chr1 (4-136)||(31491687-31491819)
chr1 (2-136)||(9915543-9915678)
chr1 (2-148)||(5463675-5463821)
chr1 (2-143)||(10842880-10843021)
chr1 (2-136)||(32806855-32806989)
chr1 (2-134)||(15823134-15823266)
chr1 (5-143)||(15573716-15573854)
chr1 (2-128)||(49468636-49468762)
chr1 (2-151)||(48009110-48009259)
chr1 (2-95)||(43759432-43759525)
chr1 (5-150)||(44108704-44108849)
chr1 (2-143)||(52125046-52125187)
chr1 (2-143)||(35847846-35847984)
chr1 (2-136)||(46046073-46046207)
chr1 (6-143)||(49426329-49426466)
chr1 (4-128)||(46286743-46286867)
chr1 (5-131)||(50094333-50094459)
chr1 (29-134)||(43358133-43358238)
chr1 (5-104)||(52066239-52066338)
chr1 (2-132)||(38530760-38530890)
chr1 (2-136)||(48025171-48025305)
chr1 (2-138)||(34110627-34110763)
chr1 (5-136)||(1740557-1740688)
chr1 (2-143)||(25151909-25152051)
chr1 (5-88)||(31798693-31798776)
chr1 (48-143)||(40717272-40717367)
chr1 (53-143)||(49894932-49895022)
chr1 (19-136)||(7213951-7214073)
chr1 (63-128)||(11134387-11134452)
chr1 (5-89)||(24611483-24611567)
chr1 (53-136)||(28200141-28200224)
chr1 (53-144)||(50591229-50591320)
chr1 (53-135)||(22665087-22665169)
chr1 (53-134)||(44582699-44582780)
chr1 (2-58)||(27209088-27209144)
chr1 (53-136)||(5854143-5854226)
chr1 (53-143)||(9552269-9552357)
chr1 (2-58)||(8895011-8895067)
chr1 (79-143)||(30686811-30686875)
chr1 (53-136)||(254830-254913)
chr1 (53-128)||(672209-672284)
chr1 (53-136)||(2459156-2459239)
chr1 (53-136)||(26252270-26252353)
chr1 (53-95)||(9333230-9333272)
chr1 (53-95)||(9357003-9357045)
chr1 (2-58)||(29567995-29568051)
chr1 (2-58)||(31699285-31699341)
chr1 (85-136)||(6377205-6377256)
chr1 (53-128)||(42650176-42650251)
chr1 (90-143)||(31699200-31699253)
chr1 (78-143)||(45749411-45749476)
chr1 (6-58)||(5225821-5225873)
chr1 (2-58)||(8989635-8989691)
chr1 (2-58)||(25560868-25560924)
chr1 (6-58)||(26595065-26595117)
chr1 (78-133)||(28751330-28751385)
chr1 (85-140)||(40719197-40719252)
chr1 (90-136)||(13408253-13408299)
chr1 (85-151)||(15646977-15647043)
chr1 (20-58)||(27721065-27721103)
chr1 (20-58)||(27721180-27721218)
chr1 (5-50)||(9092694-9092739)
chr1 (78-143)||(12851907-12851972)
chr1 (81-134)||(24040945-24040998)
chr1 (25-58)||(47696107-47696140)
chr1 (18-58)||(5094-5134)
[»] chr6 (36 HSPs)
chr6 (5-134)||(19675081-19675210)
chr6 (2-136)||(1135025-1135159)
chr6 (2-143)||(24163625-24163767)
chr6 (2-136)||(23259244-23259378)
chr6 (5-143)||(24555838-24555977)
chr6 (2-136)||(10520309-10520443)
chr6 (2-89)||(10540442-10540529)
chr6 (2-136)||(29713325-29713459)
chr6 (61-144)||(34513569-34513652)
chr6 (2-151)||(234134-234274)
chr6 (53-138)||(25932781-25932866)
chr6 (2-61)||(31443439-31443498)
chr6 (53-132)||(17345061-17345136)
chr6 (2-56)||(18737087-18737141)
chr6 (2-58)||(9940747-9940803)
chr6 (53-132)||(34576696-34576771)
chr6 (56-125)||(26189664-26189733)
chr6 (2-55)||(32619825-32619878)
chr6 (2-58)||(1502750-1502806)
chr6 (2-58)||(20226218-20226274)
chr6 (2-58)||(22120202-22120258)
chr6 (2-56)||(16128006-16128060)
chr6 (5-59)||(17552243-17552297)
chr6 (85-143)||(30627264-30627322)
chr6 (5-50)||(577164-577209)
chr6 (2-51)||(8957867-8957916)
chr6 (2-51)||(8961441-8961490)
chr6 (5-58)||(12459316-12459369)
chr6 (5-58)||(13503841-13503893)
chr6 (2-58)||(3988741-3988797)
chr6 (6-58)||(21271400-21271452)
chr6 (19-58)||(12322881-12322920)
chr6 (3-58)||(13011345-13011400)
chr6 (53-131)||(6992553-6992631)
chr6 (106-143)||(10540670-10540707)
chr6 (6-58)||(17828386-17828438)
[»] scaffold0110 (1 HSPs)
scaffold0110 (2-143)||(24652-24793)
[»] scaffold0048 (1 HSPs)
scaffold0048 (9-128)||(62740-62859)
[»] scaffold0015 (1 HSPs)
scaffold0015 (2-136)||(21000-21134)
[»] scaffold0294 (1 HSPs)
scaffold0294 (2-94)||(3465-3557)
[»] scaffold0078 (1 HSPs)
scaffold0078 (55-132)||(1371-1448)
[»] scaffold0758 (1 HSPs)
scaffold0758 (56-136)||(6246-6326)
[»] scaffold0565 (3 HSPs)
scaffold0565 (2-70)||(9627-9695)
scaffold0565 (85-136)||(9579-9630)
scaffold0565 (2-58)||(9952-10008)
[»] scaffold0003 (1 HSPs)
scaffold0003 (53-128)||(321878-321953)
[»] scaffold2107 (1 HSPs)
scaffold2107 (21-95)||(344-418)
[»] scaffold0047 (1 HSPs)
scaffold0047 (53-136)||(70372-70455)
[»] scaffold0136 (1 HSPs)
scaffold0136 (5-50)||(9647-9692)
[»] scaffold0009 (1 HSPs)
scaffold0009 (79-132)||(62993-63046)
[»] scaffold0007 (1 HSPs)
scaffold0007 (78-143)||(158265-158329)
[»] scaffold0182 (1 HSPs)
scaffold0182 (2-58)||(18252-18308)
[»] scaffold0072 (1 HSPs)
scaffold0072 (81-136)||(12001-12056)
[»] scaffold0502 (1 HSPs)
scaffold0502 (2-58)||(569-625)
[»] scaffold0300 (1 HSPs)
scaffold0300 (2-58)||(4664-4720)


Alignment Details
Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 255
Target Start/End: Original strand, 41850485 - 41850734
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||||||| |||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  41850485 ttttttctttaatgaaaa-caaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgca 41850583  T
Q  105 attagctaaaacgccactcattttaaaacggatgaagtagattttaatctccatgttacaggaaggggtgaaaatatgtcatgtcagaccaaactacgat 204  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||||||    
T  41850584 attagctaaagcgccactcattttgaaacggatggagtagattttaatctccatgttacgggaaggagtgaaaatatgtcatgtcagactagactacgat 41850683  T
Q  205 aggtctgagcttagccttcgaaaaattttgcaagcgtgtttgacctatgat 255  Q
    || |||||||||||||||||||   |||| |||||||||||||||||||||    
T  41850684 agttctgagcttagccttcgaattttttttcaagcgtgtttgacctatgat 41850734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 23525366 - 23525225
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| |||    
T  23525366 ttattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattgttatgacatttgactactttattcccttccttaatatgtgt 23525267  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| ||||||||| ||||||| || ||||||| ||||||    
T  23525266 gcaattggctaaaacgacactcatattgaaacggaggaagta 23525225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 47895394 - 47895253
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||| ||||  ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  47895394 ttattttttctttaatgaaaagcaaacaaatagttgattaggataatttggtaaaattgctatgacatatgactactttatttcattccttaatatgtgt 47895295  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| |||||| || |||||||||||||||||| ||||||    
T  47895294 gcaattggctaaagcgacactcattttaaaacggaggaagta 47895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 44676321 - 44676455
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| |||    
T  44676321 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttaactactttattctattccttaatatgtgt 44676420  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    | |||| ||||||||  |||||||||| |||||||    
T  44676421 gtaattggctaaaacaacactcattttgaaacgga 44676455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 45213772 - 45213642
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  45213772 ttattttttctttaatgaaaagcaaaccaatagttgattagaataatttggtaaaattgctatgacatttgactactttatttcattccttaatatgtgt 45213673  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    |||||| |||||| || ||||||||||||||    
T  45213672 gcaattggctaaagcgacactcattttaaaa 45213642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 30431220 - 30431353
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||| | ||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  30431220 ttattttttctctaatgaaaaacaagtcaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatctatgt 30431319  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||| | ||||||| | ||||||||||||||||||    
T  30431320 gcaact-gctaaaatgacactcattttaaaacgga 30431353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 45566902 - 45567034
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| |||   ||||| ||||||||    
T  45566902 ttttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaattgctatgacatttgactactttattacat---ttaatctatgtgca 45566998  T
Q  105 attagctaaaacgccactcattttaaaacggatgaa 140  Q
    ||| ||||||| | ||||||||||||||||||||||    
T  45566999 attggctaaaatgacactcattttaaaacggatgaa 45567034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 39359020 - 39359152
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||| |    
T  39359020 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatttatat 39359119  T
Q  102 gcaattagctaaaacgccactcattttaaaacg 134  Q
     |||||  |||||||| |||||||||| |||||    
T  39359120 acaattgactaaaacgacactcattttgaaacg 39359152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 33194081 - 33193950
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||| | |||    
T  33194081 ttattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgttatgacatttgactactttatttcattccttaatctgtgt 33193982  T
Q  102 gcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||  ||||| || |||||||||| ||||    
T  33193981 gcaattgactaaagcgacactcattttgaaac 33193950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 38363891 - 38364025
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||  ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||| | | |    
T  38363891 ttattttttctttaatgaaaaacaaaccaacggtttattaggataatttggtaaaattgctatgacatttgactgctttattccattggttaatctgtat 38363990  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| ||||||||| ||||||||||||||||||    
T  38363991 gcaattggctaaaacgacactcattttaaaacgga 38364025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 2458111 - 2458242
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||  ||| |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  2458111 ttttttctttaatgaaaattaaaccaatagttgattaggataatttggtaaaattgctatgacattttactactttattgcattccttaatatgtgtgca 2458210  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    ||| ||||||  | |||||||||| |||||||    
T  2458211 attggctaaagtgacactcattttgaaacgga 2458242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 36460909 - 36461039
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||| |||| ||||||||||| |||||||||||||   | ||     
T  36460909 tttttctttgatgaaaaacaaaccaatagttgattaggataatttggtaaaattactatgatatttaactactttatttcattccttaatatgcctacat 36461008  T
Q  106 ttagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||| || ||||||||||||||||||    
T  36461009 ttagctaaagcgacactcattttaaaacgga 36461039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 51398110 - 51398244
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||||| ||| |||||||| ||||||||| |||| |||||| | |||    
T  51398110 ttattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattgttataacatttgattactttatttcatttcttaatctgtgt 51398209  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || |||||||||| |||||||    
T  51398210 gcaattggctaaagcgacactcattttgaaacgga 51398244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 36729805 - 36729686
Alignment:
Q  19 aaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgc 118  Q
    ||||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||||||| ||||||||| |||||||||     
T  36729805 aaaaacaaaccaatagttgattaggataatttggtaaaattgttatgatatttgactactttattccattacttaatatgtgtgcaattggctaaaacga 36729706  T
Q  119 cactcattttaaaacggatg 138  Q
    | |||||||| |||| ||||    
T  36729705 cgctcattttgaaacagatg 36729686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 41287543 - 41287412
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||| |||||||  || |||||||||| |||| |    
T  41287543 ttttttctttaatgaaaaagaaaccaatagttgattaggataatttggtaaaattgctatgacatttgaccactttatctcaatccttaatatgtgtgta 41287444  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    ||| |||||| || |||||||||| |||||||    
T  41287443 attggctaaagcgacactcattttgaaacgga 41287412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 11393645 - 11393783
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||| ||| ||||||||||||    
T  11393645 ttattttttctttaattaataacaaatcaatagttgattaggataatttgataaaattgttatggtatttgactactttattctatttcttaatatatgt 11393744  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaa 140  Q
     ||| |   |||| || |||||||||||||||| |||||    
T  11393745 acaactgattaaagcgacactcattttaaaacgaatgaa 11393783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 31853612 - 31853482
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||| ||||| || ||    
T  31853612 ttattttttctttaatgaaagacaaaccaatagttgattaggataatttgataaaattgttatgacatttgactattttatttcattctttaatctaagt 31853513  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    |||||| | |||| || || |||||||||||    
T  31853512 gcaattggttaaagcgacattcattttaaaa 31853482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 47138068 - 47138206
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||||||||||||  |||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  47138068 ttttttctttaatgaaaaacaaacgaataattgattaggataatttggtaaaattgctatgacatttgactactttattcaattatttaatatgtgtgca 47138167  T
Q  105 attagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||  |||||  | |||||||||| ||||||||| ||||    
T  47138168 attgactaaagtgacactcattttgaaacggatggagta 47138206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 38016474 - 38016579
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  38016474 ttattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattactatgacatttgactactttatttcattccttaatatgtgt 38016573  T
Q  102 gcaatt 107  Q
    | ||||    
T  38016574 gtaatt 38016579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 30426370 - 30426268
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||  |||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  30426370 ttttttcttcaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgacatttgactactatattccattccttaatctgtgtgca 30426271  T
Q  105 att 107  Q
    |||    
T  30426270 att 30426268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 33024350 - 33024236
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||| |||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||| || ||| ||||||||||||| |||||||||| | |||    
T  33024350 ttatttcttctttaatggaaaacaaatcaatagttgattaagataatttgataaaattgctacgatattcgactactttattcaattccttaatttgtgt 33024251  T
Q  102 gcaattagctaaaac 116  Q
    |||||| ||||||||    
T  33024250 gcaattggctaaaac 33024236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 54933205 - 54933115
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||    
T  54933205 taaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattggctaaagcgacactcattttaaaacggatggagta 54933115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 3152840 - 3152726
Alignment:
Q  19 aaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgc 118  Q
    ||||||||| ||||| || ||||| |||||| | |||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||| | |||||||     
T  3152840 aaaaacaaaccaataattgattagaataattgggtaaaattgttatgacatctgactactttatttcattccttaatatgtgtgcaattggttaaaacga 3152741  T
Q  119 cactcattttaaaac 133  Q
    |||||||||||||||    
T  3152740 cactcattttaaaac 3152726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 50088362 - 50088232
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||||||| |||||||| |||| ||||||||| |||| |||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  50088362 tttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaagttgccatgatatttgagtactttatcccattccttaatatatgtgcaa 50088263  T
Q  106 ttagctaaaacgccactcattttaaaacgga 136  Q
    |  | |||| || | ||||| ||||||||||    
T  50088262 tgggttaaagcgacgctcatcttaaaacgga 50088232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 45518530 - 45518429
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||| | ||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||| |||||||||||    
T  45518530 tttttctttaatgaaaaatatatcaataattgattaggataatttgataaaattgttatgacatttgactattttattcaatttcttagtatatgtgcaa 45518431  T
Q  106 tt 107  Q
    ||    
T  45518430 tt 45518429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 53200730 - 53200597
Alignment:
Q  3 tattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtg 102  Q
    ||||||||| || ||||||| ||||  ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| | ||||    
T  53200730 tattttttccttaatgaaaagcaaactaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattctttaatctttgtg 53200631  T
Q  103 caattagctaaaacgccactcattttaaaacgga 136  Q
     ||||  |||||  | |||||||||| |||||||    
T  53200630 taattgactaaagtggcactcattttgaaacgga 53200597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 13756923 - 13756786
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || ||||||||| |||||||| |||||||||||||| |||||||||||  |||||||||||||||||||    | ||||| | |||    
T  13756923 ttattttttctttaataaaaaacaaaccaatagttgattaggataatttgctaaaattgctacaacatttgactactttattc----cgttaatttgtgt 13756828  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    | ||||| |||||||| | |||||||| ||||||||| ||||    
T  13756827 gtaattaactaaaacgacgctcattttgaaacggatggagta 13756786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 2988610 - 2988527
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||| || |||||||||| |||||||    
T  2988610 taaaattgctatgacatttgactactttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacgga 2988527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 36381417 - 36381326
Alignment:
Q  7 ttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatata 98  Q
    |||| ||| ||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  36381417 ttttttttaatgaaaaacaaatcaatagatgattaagataatttggtaaaattgctatgacatttgactactttattccattaattaatata 36381326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 45392007 - 45391878
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||  ||||||||||  | ||||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| ||  ||||||| ||     
T  45392007 ttattttttcttaaatgaaaaacagtt-aatagttgattatgataatttggtaaaattgctatgacatttgattactttattcctttgtttaatatgtgc 45391909  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    |||||| |||||| || ||||||||||||||    
T  45391908 gcaattggctaaaccgacactcattttaaaa 45391878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 51482035 - 51482167
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgcta-tgacatttgactactttattccattccttaatatatg 100  Q
    ||||||||||||| ||||||||  ||||  | ||| |||||||||||||||||||||||||| | | |||||||||||||||| ||||||||||| | ||    
T  51482035 ttattttttctttaatgaaaaaataatcttttgtttattaggataatttgataaaattgctactaatatttgactactttatttcattccttaatctgtg 51482134  T
Q  101 tgcaattagctaaaacgccactcattttaaaac 133  Q
    || ||||   ||||||| |||||||||||||||    
T  51482135 tgtaattgtttaaaacgacactcattttaaaac 51482167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 39168806 - 39168932
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| |||       |||||||||||||| ||||||||||   |||    
T  39168806 ttattttttttttaatgaaaaacaaattaatagttaattaggataatttgataaaattacta-------tgactactttattcaattccttaatcattgt 39168898  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| | ||||| | |||| |||||||||||||    
T  39168899 gcaatt-gataaaatgacacttattttaaaacgga 39168932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 32492231 - 32492138
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatat 97  Q
    ||||||||||||| || ||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||    
T  32492231 ttattttttctttaataaaaaa-aaatcaataattgattaggataatttgataaaattgttatgatatttgacta-tttatttcattccttaatat 32492138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 35557808 - 35557669
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggata-----atttgataaaattgctatgacatttgactactttattccattccttaata 96  Q
    ||||||||||||| |||||||| ||| |||||||| |||||||||     ||||| ||||||||||||||||||||| |||||||||  |||| |||||     
T  35557808 ttattttttctttaatgaaaaataaaccaatagttgattaggatatgataatttggtaaaattgctatgacatttgattactttatttaattcattaatc 35557709  T
Q  97 tatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    | ||||||| | ||||||||| || | ||||| |||||||    
T  35557708 tgtgtgcaaatggctaaaacgacatttattttgaaacgga 35557669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 32303905 - 32303815
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | ||| | ||||| ||||||| |||||||||| || |||||| ||||    
T  32303905 taaaattgctatgacatttgactactttatttcattccttaatctgtgtacgattagttaaaacgacactcattttgaagcggatggagta 32303815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 20512496 - 20512400
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtagatttt 149  Q
    |||||||||||||||||||||||| ||||||| ||| |||||| | |||||||||  ||||| || |||||||||||||||||| | |||| |||||    
T  20512496 taaaattgctatgacatttgactattttattcaatttcttaatctgtgtgcaattgactaaagcgacactcattttaaaacggagggagtacatttt 20512400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 36541644 - 36541724
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||| |||| | |||| || |||||||||||||||    
T  36541644 taaaattgctataacatttgactattttatttcattccttaatatatgtgtaattggttaaagcgacactcattttaaaac 36541724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 50346724 - 50346780
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  50346724 ttattttttctttaatgaaaaacaaatcaatagttaattaagataatttgataaaat 50346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 44645493 - 44645576
Alignment:
Q  54 aaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggat 137  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||| |||| |||||||||||||| || | ||||| ||||||||    
T  44645493 aaaattgctatgatatttgactactttatttcattctttaatatgtgtgtaattagctaaaacgacatttattttgaaacggat 44645576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 49470926 - 49471008
Alignment:
Q  54 aaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||||||||||| ||||||| |||| ||||| | ||||||||||  |||||||  |||||||||||||||||    
T  49470926 aaaattgctatgacatttgactattttattcaattctttaatttgtgtgcaattatttaaaacgatactcattttaaaacgga 49471008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 43687883 - 43687800
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| |||||||||||||||||||||||||||| |||||   |||||||||  |||||||| |||| ||||| |||||||    
T  43687883 taaaattgttatgacatttgactactttattccattcattaatccgtgtgcaattgactaaaacgacacttattttgaaacgga 43687800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 54261568 - 54261651
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| ||||||||||||||||||||||| ||| |||||| | |||| |||| |||||| || |||||||||| |||||||    
T  54261568 taaaattgttatgacatttgactactttattcaatttcttaatctgtgtgtaattggctaaagcgacactcattttgaaacgga 54261651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 25722461 - 25722400
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaa 114  Q
    |||||||| ||||||||||||||||||||||||||| |||||| | ||||||||| ||||||    
T  25722461 taaaattgttatgacatttgactactttattccatttcttaatctgtgtgcaattggctaaa 25722400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 8817240 - 8817296
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||    
T  8817240 ttattttttctttaatgaaaaataaatcaatagttgattagaataatttgataaaat 8817296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 30315409 - 30315465
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  30315409 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 30315465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 53560817 - 53560900
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||  |||||||||| |||||||||||  |||||||||||| | || |||| ||||||||| |||| |||||||||||||    
T  53560817 taaaattattatgacatttaactactttattttattccttaatatgtatgtaattggctaaaacgacacttattttaaaacgga 53560900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 42007061 - 42006983
Alignment:
Q  54 aaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||||||||||||| |||||| ||||||| |||| |||||  || ||||||| |||||| || ||||||||||||||    
T  42007061 aaaattgctatgacatctgactattttattctattctttaatccatatgcaattggctaaatcgacactcattttaaaa 42006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 51381877 - 51381967
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||| |||||||| ||||||||| |||||| ||||||||||| | |||||||||  ||||| || |||||||||| ||||| ||| ||||    
T  51381877 taaaactgctatgatatttgactattttatttcattccttaatctgtgtgcaattgactaaagcgacactcattttgaaacgaatggagta 51381967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 2567986 - 2567929
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatg 138  Q
    |||| |||||||||| ||||||||||| ||||||||| || |||||||||||||||||    
T  2567986 attcaattccttaatctatgtgcaattggctaaaacgacattcattttaaaacggatg 2567929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 19373685 - 19373741
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| ||||||| |||||| ||||||    
T  19373685 ttattttttctttaatgaaaaacaaaccaatagttgattaggagaatttggtaaaat 19373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 25061876 - 25061936
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtaga 145  Q
    ||||||||||||| ||||||||  ||||||||| |||||||||| ||||||||| ||||||    
T  25061876 cattccttaatatgtgtgcaatcggctaaaacgacactcatttttaaacggatggagtaga 25061936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 36844793 - 36844737
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||| |||||||| ||||||||| ||||||||||| |||||||||||||| ||||||    
T  36844793 ttatgttttctttaatgaaaaactaatcaatagttgattaggataatttggtaaaat 36844737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 43599518 - 43599466
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggat 137  Q
    ||||||||||| ||||||||||||  ||||||| |||||||||||||||||||    
T  43599518 cattccttaatttatgtgcaattatataaaacgacactcattttaaaacggat 43599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 43169487 - 43169562
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||    
T  43169487 taaaactgcaatgacatttgactactttatttcattccttaatctttgtgtaattgactaaaacgacactaatttt 43169562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 30934860 - 30934804
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||| ||||| |||||||||||| ||||| || |||| ||||||||||||||||    
T  30934860 ttattttatctttaatgaaaaacaaaccaatatttgattatgataatttgataaaat 30934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 44854492 - 44854560
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtagatttt 149  Q
    |||| |||| ||||| ||||||||||| ||||||||| || ||||||| ||||||||| |||| |||||    
T  44854492 attcaattcattaatctatgtgcaattggctaaaacgacaatcattttgaaacggatggagtatatttt 44854560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 45095709 - 45095773
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtaga 145  Q
    |||||||||||||||||  ||||||||||||||| || || ||||||| ||||||| | ||||||    
T  45095709 attccattccttaatatgcgtgcaattagctaaagcgacaatcattttgaaacggagggagtaga 45095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 48903385 - 48903441
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| || ||||||||| |||||||| ||||  |||||||||||||||    
T  48903385 ttattttttctttaattaaaaacaaagcaatagttgattaaaataatttgataaaat 48903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 4476332 - 4476281
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||| |||||||||||| |||| ||||||||| |||| |||||||||||||    
T  4476332 cattctttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 4476281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 15514705 - 15514646
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtag 144  Q
    ||||||||| | |||||||||||  |||||||| || ||||||||||||||||| |||||    
T  15514705 cattccttattttatgtgcaattgactaaaacgacattcattttaaaacggatggagtag 15514646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 31290944 - 31290893
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||| | |||| |||| ||||||||| ||||||||||||||||||    
T  31290944 cattccttaatctgtgtgtaattggctaaaacgacactcattttaaaacgga 31290893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 42740405 - 42740456
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||| |||||||||||| |||| ||||||||| |||| |||||||||||||    
T  42740405 cattctttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 42740456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 44648380 - 44648329
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||| | ||||||||| ||||||||| |||||||||| |||||||    
T  44648380 cattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacgga 44648329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 35099340 - 35099290
Alignment:
Q  90 cttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaa 140  Q
    |||||| | ||||||||| ||||||||| ||| ||||||||||||||||||    
T  35099340 cttaatttgtgtgcaatttgctaaaacgacacccattttaaaacggatgaa 35099290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 38141051 - 38141105
Alignment:
Q  4 attttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||| |||||||||||| ||||| || ||||| |||||||| ||||||    
T  38141051 attttttctttaatgaaaaacaaaccaataattgattagaataatttggtaaaat 38141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 42791479 - 42791537
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||||||  |||||||| ||||||| | |||||||||| ||||||||| ||||    
T  42791479 cattccttaatatgcgtgcaattggctaaaatgacactcattttgaaacggatggagta 42791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 51057702 - 51057669
Alignment:
Q  110 ctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| |||||||||||||||||||||||||    
T  51057702 ctaaaacgacactcattttaaaacggatgaagta 51057669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 9189486 - 9189430
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| || ||||||||| |||||||| |||| ||| ||||| ||||||    
T  9189486 ttattttttctttaataaaaaacaaaccaatagttgattacgatgatttggtaaaat 9189430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 38277930 - 38277982
Alignment:
Q  80 tattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||| ||||||||||| |  |||||||| ||||||||| ||||||||||||||    
T  38277930 tatttcattccttaatttgagtgcaattggctaaaacgacactcattttaaaa 38277982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 40487927 - 40487983
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||||||   ||||||||||| ||||||| ||||  |||||||||||||||    
T  40487927 ttattttttctttatcgaaaaacaaattaatagttgattataataatttgataaaat 40487983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 42072084 - 42072132
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    |||| |||||||| ||| ||||||||||||||||| |||| ||||||||    
T  42072084 ttatgttttctttaatggaaaacaaatcaatagttgattatgataattt 42072132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 37815824 - 37815958
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  37815824 ttattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgacatttgactattttattccattctttaatatgtgt 37815923  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| ||||||||| ||||||||||||||||||    
T  37815924 gcaattggctaaaacgacactcattttaaaacgga 37815958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 10599464 - 10599597
Alignment:
Q  3 tattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtg 102  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10599464 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatatgtg 10599563  T
Q  103 caattagctaaaacgccactcattttaaaacgga 136  Q
    |||||   ||||||| ||||||||||||||||||    
T  10599564 caattgattaaaacgacactcattttaaaacgga 10599597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 1742091 - 1742225
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1742091 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatgtgt 1742190  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || |||||||||| |||||||    
T  1742191 gcaattggctaaagcgacactcattttgaaacgga 1742225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 24680228 - 24680352
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  24680228 ttattttttctttaatgaaaaacaaatcaatagttgattagaataatttggtaaaattgttatgacatttgactactttatttcattccttaatatatgt 24680327  T
Q  102 gcaattagctaaaacgccactcatt 126  Q
    |||||||||||||||| ||||||||    
T  24680328 gcaattagctaaaacgacactcatt 24680352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 35777919 - 35778053
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||    
T  35777919 ttattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatatgtgt 35778018  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||| ||  |||||||||||||||||    
T  35778019 gcaattagctaaagcgatactcattttaaaacgga 35778053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 13405175 - 13405047
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||||| ||||||    
T  13405175 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgactactttatttcatttcttaatatgtgtgca 13405076  T
Q  105 attagctaaaacgccactcattttaaaac 133  Q
    ||| | ||||||| |||||||||||||||    
T  13405075 attggttaaaacgacactcattttaaaac 13405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 27947550 - 27947411
Alignment:
Q  4 attttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgc 103  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  27947550 attttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaattgctatgacatttgactactttattcaattcattaatatgtgtgc 27947451  T
Q  104 aattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||| | ||||  | |||||||||| ||||||||| ||||    
T  27947450 aattggttaaagtgacactcattttgaaacggatggagta 27947411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 31418564 - 31418430
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || |||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||    
T  31418564 ttattttttctttaattaaaaacaaattaatagttgattaggataatttggtgaaattgctatgacatttgactactttattccatttcttaatatatgt 31418465  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||   |||| || |||| |||||||||||||    
T  31418464 gcaattgattaaagcgacacttattttaaaacgga 31418430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 27935867 - 27936008
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||||| |||||| |||||||||||||||| |||||||||| | |||    
T  27935867 ttattttttctttaatgaaaaacaaatcaatagttaattaagctaatttggtaaaattgttatgacttttgactactttattcaattccttaatctgtgt 27935966  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||| || |||||| || |||||||||| ||||||||| ||||    
T  27935967 gcagttggctaaagcgacactcattttgaaacggatggagta 27936008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 22298096 - 22298232
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgac-----tactttattccattccttaata 96  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||     |||||||||||||||||||||     
T  22298096 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttactttattccattccttaatc 22298195  T
Q  97 tatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    | ||||||||| ||||||||| |||||||||| ||||    
T  22298196 tgtgtgcaattggctaaaacgacactcattttgaaac 22298232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 29530986 - 29530854
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||  || |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||| | |||    
T  29530986 ttattttttcttcaataaaaaacaaatcaatagttgattaggatgatttggtaaaattgctatgacatttgactactttattttattccttaatctgtgt 29530887  T
Q  102 gcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||| |||||| || ||||||||||||||||    
T  29530886 gcaattggctaaatcgacactcattttaaaacg 29530854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 23935521 - 23935655
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |  ||    
T  23935521 ttattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattctttaatgtgggt 23935620  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
     ||||| | |||| || ||||||||||||||||||    
T  23935621 acaattgggtaaagcgacactcattttaaaacgga 23935655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 42879985 - 42879855
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| | | |||    
T  42879985 ttattttttctttaatgaaaaacaaactaatagttgattacgataatttggtaaaattgctatgacatttgcctactttattccattccttactctgtgt 42879886  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    |||||| |||||| || ||||||||||||||    
T  42879885 gcaattggctaaagcgacactcattttaaaa 42879855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 44453238 - 44453367
Alignment:
Q  7 ttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaat 106  Q
    |||| ||| |||||||||||| |||||| | |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| | | ||||||    
T  44453238 ttttttttaatgaaaaacaaaccaataggtgattaggataatttggtaaaattgttatgacatttgactactttattccattctttaatctgtatgcaat 44453337  T
Q  107 tagctaaaacgccactcattttaaaacgga 136  Q
    | ||||||||| ||||||||||||||||||    
T  44453338 tggctaaaacgacactcattttaaaacgga 44453367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 45948681 - 45948545
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||| ||| | |||||| |||    
T  45948681 ttattttttctttaatgaaaaacaaaccaatggttgattacgataatttggtaaaattgctatgacatttgactactttattctatttcgtaatatgtgt 45948582  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatg 138  Q
    |  |||  |||||||| ||||||||||||||||||||    
T  45948581 gtgattgactaaaacgacactcattttaaaacggatg 45948545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 23155509 - 23155371
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||| ||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||| | | |||||    
T  23155509 tttttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttaactactttattcaattctttaatctgtatgcaa 23155410  T
Q  106 ttagctaaaacgccactcattttaaaacggatgaagtag 144  Q
    || |||||| ||  ||||||||||||||||||| |||||    
T  23155409 ttggctaaagcgatactcattttaaaacggatggagtag 23155371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 48684823 - 48684954
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || |||||||||||||||| | || ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| | |||    
T  48684823 ttattttttctttaataaaaaacaaatcaatagatgataaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatctgtgt 48684922  T
Q  102 gcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||   |||| || |||||||||||||||    
T  48684923 gcaattgattaaagcgacactcattttaaaac 48684954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 45933636 - 45933506
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||| ||| |||||||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||||| | |||||||    
T  45933636 tttttttttaatgaaaaacaaaccaaaagttgattaagataatttgataaaattgctatgatatttgactattttattcaattccttaatctgtgtgcaa 45933537  T
Q  106 ttagctaaaacgccactcattttaaaacgga 136  Q
     | |||||| || ||||||||||||||||||    
T  45933536 gtggctaaagcgacactcattttaaaacgga 45933506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 7795278 - 7795153
Alignment:
Q  18 gaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacg 117  Q
    |||||||||| |||||| | |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| | ||| ||||| |||||| ||    
T  7795278 gaaaaacaaaccaataggtgattaggataatttggtaaaattgctatgacattttactactttatttcattccttaatttgtgtacaattggctaaagcg 7795179  T
Q  118 ccactcattttaaaacggatgaagta 143  Q
     |||||||||| ||||||||| ||||    
T  7795178 acactcattttgaaacggatggagta 7795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 41137832 - 41137954
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||||||  |||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41137832 ttttttctttaatgaaat-caaaccagtagttgattaggataatttggtaaaattgctatgacatttgactactttattccattttttaatatatgtgca 41137930  T
Q  105 attagctaaaacgccactcatttt 128  Q
    |||  |||||| | ||||||||||    
T  41137931 attcactaaaatgacactcatttt 41137954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 36808034 - 36808139
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||  |||| ||||||| | |    
T  36808034 ttattttttctttaatgaaaaacaactcaatagttgattcgggtaatttgataaaattgctatgacatttgactactttattatattctttaatatgtat 36808133  T
Q  102 gcaatt 107  Q
    ||||||    
T  36808134 gcaatt 36808139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 19906565 - 19906648
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||| || |||||||||| |||||||    
T  19906565 taaaattgctatgacatttgactattttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacgga 19906648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 6521973 - 6522053
Alignment:
Q  56 aattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||| |||||||||||||||||||||| ||||||||||| | ||||||||| |||||| || ||||||||||||||||||    
T  6521973 aattgttatgacatttgactactttatttcattccttaatttgtgtgcaattggctaaagcgacactcattttaaaacgga 6522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 8334316 - 8334209
Alignment:
Q  31 atagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaa 130  Q
    |||||| |||| || ||||||| ||||||| |||||||||||||||||||||| |||| |||||| | ||||||||| || |||||| ||| || |||||    
T  8334316 atagttgattaagagaatttgagaaaattgttatgacatttgactactttattacatttcttaatctgtgtgcaattggcgaaaacgacacacaatttaa 8334217  T
Q  131 aacggatg 138  Q
    ||||||||    
T  8334216 aacggatg 8334209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 36447071 - 36446981
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||  ||||| |  ||||||||||||||| |||| ||||    
T  36447071 taaaattgctatgacatttgactactttattccattcattaatttgtgtgcaattgtctaaagcaacactcattttaaaacagatggagta 36446981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 16564801 - 16564720
Alignment:
Q  55 aaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||||||||||||||||| ||||||||||| | | ||||||| | |||| || ||||||||||||||||||    
T  16564801 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16564720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 16600861 - 16600942
Alignment:
Q  55 aaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||||||||||||||||| ||||||||||| | | ||||||| | |||| || ||||||||||||||||||    
T  16600861 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16600942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 32345836 - 32345753
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| ||||||||||||||||||||||| ||| |||||| | ||||||||| |||||| || |||||||||| |||||||    
T  32345836 taaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgga 32345753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 39117490 - 39117407
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| |||||||||||||||||||||||||||| ||||| | ||||||| | | |||| || ||||||||||||||||||    
T  39117490 taaaattgttatgacatttgactactttattccattctttaatctgtgtgcaagtggataaagcgacactcattttaaaacgga 39117407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 47461426 - 47461370
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  47461426 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 47461370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 36915520 - 36915603
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||| |||||||||  | ||| ||||||||||| |||||| || | ||||||||| ||||||||||||||||||    
T  36915520 taaaattgctatgatatttgactaaatgattgcattccttaatctatgtgaaaatggctaaaacgacactcattttaaaacgga 36915603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 34012559 - 34012612
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  34012559 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34012612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 45499873 - 45499820
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  45499873 ttttttctttaatgaaaaacaaaccaatagttaattaggataatttggtaaaat 45499820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 21819382 - 21819438
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  21819382 ttattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaat 21819438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 29636278 - 29636222
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| ||||| || |||||||||||||||||||||    
T  29636278 ttattttttctttaatgaaaaacaaaccaataatttattaggataatttgataaaat 29636222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 6563467 - 6563414
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||| ||| |||||||||||||||||||||    
T  6563467 ttttttctttaatgaaaaacaaaccaatggttgattaggataatttgataaaat 6563414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 19276616 - 19276543
Alignment:
Q  55 aaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    |||||||||| |||||||||||||||| | ||||||||||| | ||||||||| |||||| || |||| |||||    
T  19276616 aaattgctataacatttgactactttacttcattccttaatctgtgtgcaattggctaaagcgacactgatttt 19276543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 28289317 - 28289370
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  28289317 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 28289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 40339561 - 40339614
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  40339561 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 40339614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 19105053 - 19104997
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||| | ||||||||||    
T  19105053 ttattttttctttaatgaagaacaaatcaatagttgattaggattacttgataaaat 19104997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 25055881 - 25055937
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||| || ||||||    
T  25055881 ttattttttctttaatgaaaaacaaatcaatagtaaattatgataatgtggtaaaat 25055937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 31416752 - 31416672
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    |||||||| | |||||||||| ||||||||| |||||||||||   ||||||||||||||||  | || ||||||||||||    
T  31416752 taaaattgttttgacatttgattactttatttcattccttaattcgtgtgcaattagctaaagtgacaatcattttaaaac 31416672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 10476252 - 10476291
Alignment:
Q  19 aaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10476252 aaaaacaaatcaatagttgattaggataatttgataaaat 10476291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 10684831 - 10684741
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| ||||| |||| |||| ||||||  ||||||||||||||||| ||||   ||||||| |||| ||||| ||||||||| ||||    
T  10684831 taaaattgttatgatatttaactattttattttattccttaatatatgtgtaattgattaaaacgacacttattttgaaacggatggagta 10684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 26963632 - 26963722
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| | |||| || | | |||| |  |||||||||| ||||||||| ||||    
T  26963632 taaaattgttatgacatttgactattttattccatttcttaatttgtgtgtaaatggttaaagcaacactcattttgaaacggatggagta 26963722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 33056254 - 33056200
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatga 139  Q
    ||||||||||| |||||||||||  |||||||| |||||||||| ||||||||||    
T  33056254 cattccttaatctatgtgcaattgactaaaacgacactcattttgaaacggatga 33056200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 48843655 - 48843701
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttg 51  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||    
T  48843655 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttg 48843701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 5723170 - 5723227
Alignment:
Q  86 attccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||| | |||||||||  |||||||| |||||||||||||||||||| ||||    
T  5723170 attccttaatttgtgtgcaattgactaaaacgacactcattttaaaacggatggagta 5723227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8293120 - 8293064
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||| | ||||||||||||||||||||| || | ||||||||| ||||||    
T  8293120 ttattttttctgtaatgaaaaacaaatcaatagttgatcacgataatttggtaaaat 8293064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 21752163 - 21752107
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||| ||||| |||||||||||| |||||||| ||||| |||||||| ||||||    
T  21752163 ttattttatctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 21752107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 40753477 - 40753425
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| |||||||||||| |||||||| ||||| |||||||| ||||||    
T  40753477 tttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 40753425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 47187751 - 47187807
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| || ||||||| ||||||| ||||| ||||||||||| ||||||    
T  47187751 ttattttttctttaataaaaaacatatcaataattaataaggataatttggtaaaat 47187807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 24133182 - 24133124
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaat--agttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||||||||  |||| ||||| |||||||| ||||||    
T  24133182 ttattttttctttaatgaaaaacaaatcaatacagttgattagtataatttggtaaaat 24133124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 40299021 - 40299072
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||| | ||||||||| ||||||||| |||||||||| |||||||    
T  40299021 cattccttaatttgtgtgcaattggctaaaacgacactcattttgaaacgga 40299072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 715842 - 715784
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||| ||||||||||||| ||  |||||||||| |||||||||| ||||||||| ||||    
T  715842 catttcttaatatatgtgtaaagagctaaaacgacactcattttgaaacggatggagta 715784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 6389626 - 6389569
Alignment:
Q  88 tccttaatatatgtgcaattagctaaaacgcc--actcattttaaaacggatgaagta 143  Q
    |||||||||||||||||||| ||||||||| |  ||||||||| ||||||| ||||||    
T  6389626 tccttaatatatgtgcaattggctaaaacgacgtactcatttttaaacggaggaagta 6389569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 37490890 - 37490943
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| ||||||||||||  ||||||| |||| ||||||||| ||||||    
T  37490890 ttttttctttaatgaaaaacaaactaatagtttattaagataatttggtaaaat 37490943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 39557314 - 39557277
Alignment:
Q  106 ttagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  39557314 ttagttaaaacgacactcattttaaaacggatgaagta 39557277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 12342193 - 12342327
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  12342193 ttattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaataaatgt 12342292  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| ||||||||| ||||||||||||||||||    
T  12342293 gcaattggctaaaacgacactcattttaaaacgga 12342327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 441284 - 441150
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  441284 ttattttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatttgtgt 441185  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| ||||||||| |||||||||| |||||||    
T  441184 gcaattggctaaaacgacactcattttgaaacgga 441150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 4133122 - 4133256
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||||||| || | |||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4133122 ttattttttccttaaagaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatgtgt 4133221  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || |||||||||| |||||||    
T  4133222 gcaattggctaaagcgacactcattttgaaacgga 4133256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 25383532 - 25383397
Alignment:
Q  8 tttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaatt 107  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |  ||||||||    
T  25383532 tttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaattgctatgatatttgactactttattccattccttaatttgcgtgcaatt 25383433  T
Q  108 agctaaaacgccactcattttaaaacggatgaagta 143  Q
     |||||| || |||||||||||||||||||| ||||    
T  25383432 ggctaaagcgacactcattttaaaacggatggagta 25383397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 29396733 - 29396602
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| | |||    
T  29396733 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgactactttatttcattccttaatctgtgt 29396634  T
Q  102 gcaattagctaaaacgccactcattttaaaac 133  Q
    |||||| ||||||||| |||||||||| ||||    
T  29396633 gcaattggctaaaacgacactcattttgaaac 29396602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 16807570 - 16807436
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||| |||||||| ||||||||||||  ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||    
T  16807570 ttatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattgttatgacatttgactactttattccattcattaatatgtgt 16807471  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || ||||||||||||||||||    
T  16807470 gcaattggctaaagcgacactcattttaaaacgga 16807436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 16846851 - 16846717
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||| |||||||| ||||||||||||  ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||    
T  16846851 ttatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattgttatgacatttgactactttattccattcattaatatgtgt 16846752  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || ||||||||||||||||||    
T  16846751 gcaattggctaaagcgacactcattttaaaacgga 16846717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 29808916 - 29809055
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| | ||||||    
T  29808916 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgactactttatttcattccttaatttgtgtgca 29809015  T
Q  105 attagctaaaacgccactcattttaaaacggatgaagtag 144  Q
    ||| |||||| || |||||||||| |||| |||| |||||    
T  29809016 attggctaaagcgacactcattttgaaacagatggagtag 29809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 8774156 - 8774298
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||| ||| |||||||| |||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||| |||||||    
T  8774156 tttttctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattgttatgacatttgactattttattacattccttaatatgtgtgcaa 8774255  T
Q  106 ttagctaaaacgccactcattttaaaacggatgaagtagattt 148  Q
    ||  |||||||  |||||||||||||||||||| |||| ||||    
T  8774256 ttgactaaaacaacactcattttaaaacggatggagtaaattt 8774298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 8789479 - 8789337
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||| ||| |||||||| |||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||| |||||||    
T  8789479 tttttctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattgttatgacatttgactattttatttcattccttaatatgtgtgcaa 8789380  T
Q  106 ttagctaaaacgccactcattttaaaacggatgaagtagattt 148  Q
    ||  |||||||  |||||||||| ||||||||| |||| ||||    
T  8789379 ttgtctaaaacaacactcatttttaaacggatggagtaaattt 8789337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 42743131 - 42743256
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| || ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  || ||||||    
T  42743131 ttttttctttaataaaaaacaaatcaataattgattaggataatttggtaaaattgctatgacatttgactactttatttcattcctta--atctgtgca 42743228  T
Q  105 attagctaaaacgccactcattttaaaa 132  Q
    ||| |||||| || ||||||||||||||    
T  42743229 attggctaaagcgacactcattttaaaa 42743256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 34546198 - 34546104
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatat 99  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||    
T  34546198 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaattattatgacatttgactactttattccattccttagtatat 34546104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 38926706 - 38926832
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||| ||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||| |||    
T  38926706 ttattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattgttatgacatttgactactttatttcattcattaatatgtgt 38926805  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    ||||||  ||||| || ||||||||||    
T  38926806 gcaattgactaaagcgacactcatttt 38926832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 19636608 - 19636713
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||    
T  19636608 ttattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattgttatgacatttgactactttattcaatttcttagtatatgt 19636707  T
Q  102 gcaatt 107  Q
    ||||||    
T  19636708 gcaatt 19636713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 19835201 - 19835306
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||    
T  19835201 ttattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattgttatgacatttgactactttattcaatttcttagtatatgt 19835300  T
Q  102 gcaatt 107  Q
    ||||||    
T  19835301 gcaatt 19835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 6220457 - 6220358
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||| | ||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  6220457 ttattttctttttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgctatgacatttgactactttatttcatttcttaatatatgt 6220358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 30855208 - 30855339
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||| ||||||| ||||||||||||  |||||    
T  30855208 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttaagacatttgactattttattcaattccttaatatgcgtgca 30855307  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    ||| | |||| || |||||||||| |||||||    
T  30855308 attggttaaagcgacactcattttgaaacgga 30855339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 42005007 - 42005126
Alignment:
Q  19 aaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgc 118  Q
    |||||||||  ||||||| |||||||||||||| | |||||||||   |||||||||||||||||| ||||||||||||||||| ||||||||||||||     
T  42005007 aaaaacaaacaaatagttgattaggataatttggtgaaattgctactgcatttgactactttattcaattccttaatatatgtgaaattagctaaaacga 42005106  T
Q  119 cactcattttaaaacggatg 138  Q
    |||| |||||||||||||||    
T  42005107 cacttattttaaaacggatg 42005126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 32228064 - 32227952
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||  |||||||| |||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||| | |||    
T  32228064 ttattttttctttaatgaaaaacaacccaatagttgattaggataatttggtaaaattgttatgacatttgaatactttatttcattccttaatttgtgt 32227965  T
Q  102 gcaattagctaaa 114  Q
    |||||| ||||||    
T  32227964 gcaattggctaaa 32227952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 13562094 - 13562223
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||| ||| |||||||||||| |||| ||| |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||| |||    
T  13562094 ttattttttatttaatgaaaaacaaaccaatggttgattaggataatttagtaaaatta-tatgacatttgactactttcttccattccttaatatgtgt 13562192  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    ||||||  | |||||| ||||||||||||||    
T  13562193 gcaattgacaaaaacgacactcattttaaaa 13562223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 36106456 - 36106322
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||| ||| || ||||||||  |||||||| |||| ||||||||| |||||||| ||  |||||||||||||||||| ||||||||||||| | |    
T  36106456 ttattttttttttaataaaaaacaatccaatagttgattaagataatttggtaaaattgttagaacatttgactactttatttcattccttaatatgtat 36106357  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || ||||||||||||||||||    
T  36106356 gcaatttgctaaagcgacactcattttaaaacgga 36106322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 42753863 - 42753981
Alignment:
Q  18 gaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacg 117  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||| ||||| ||||||| |||| |||| |||||| ||    
T  42753863 gaaaaacaaatcaatagttgattaggatgatttggtaaaattgctatgacatttgtctactttatttcattctttaatatgtgtgtaattggctaaagcg 42753962  T
Q  118 ccactcattttaaaacgga 136  Q
     || ||||||| |||||||    
T  42753963 acagtcattttgaaacgga 42753981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 12393971 - 12393842
Alignment:
Q  3 tattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtg 102  Q
    |||||||||||| ||||||||||||  ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  12393971 tattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgctatgacatttaactactttatttcattttttaatatgtgtg 12393872  T
Q  103 caattagctaaaacgccactcattttaaaa 132  Q
    ||||  | |||| || |||| |||||||||    
T  12393871 caatcggttaaagcggcactgattttaaaa 12393842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 25332722 - 25332805
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||| || ||||||||||||||||||    
T  25332722 taaaattgctatgacatttgactactttattcaattccttaatctgtgtgcaattagctaaagcgacactcattttaaaacgga 25332805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 45081953 - 45081818
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||| |||| | |      || |||||| ||||||||||||| |||    
T  45081953 ttattttttctttaatgaaaaacaaaacaatagttgattaggataatttggtaaaatttctataata------tattttatttcattccttaatatgtgt 45081860  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||  |||||||| |||||||||||||||||||| ||||    
T  45081859 gcaattttctaaaacgacactcattttaaaacggatggagta 45081818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 18717176 - 18717310
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||| || ||| |||||||||||| ||||| || |||||||||||||  |||||||| |||| ||||||||||| ||||| ||||| ||| | | |||    
T  18717176 ttatttattttttaatgaaaaacaaaccaataattgattaggataattttgtaaaattgttatggcatttgactacattatttcattcattagtctgtgt 18717275  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||| ||||| |||| |||||||    
T  18717276 gcaattagctaaaacgacactctttttgaaacgga 18717310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 4288764 - 4288635
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||||| |||||||||||  ||||||  ||| |||||||||||| ||||||| ||     
T  4288764 ttattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgctaaaacattt--ctattttattccattcattaatatgtga 4288667  T
Q  102 gcaattagctaaaacgccactcattttaaaac 133  Q
     ||||||| || |||| |||||||||| ||||    
T  4288666 acaattagttagaacgacactcattttgaaac 4288635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 14698140 - 14698221
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||||||||||||||||||||||||||||| ||| |||||| | ||||||||| |||||| || |||||||||| |||||    
T  14698140 taaaattgctatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacg 14698221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 39866673 - 39866596
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgc-aattagctaaaacgccactcatttta 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| | ||||||| |||||||||||    
T  39866673 taaaattgctatgacatttgactactttattccattccttaatctgtgtgcaaattggttaaaacgacactcatttta 39866596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 145
Target Start/End: Original strand, 38809849 - 38809941
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtaga 145  Q
    |||||||||||||||||||||| |||||||||| ||||||||| | ||||||||| |||||||||  ||||||||| ||| ||| | ||||||    
T  38809849 taaaattgctatgacatttgaccactttattcctttccttaatctgtgtgcaattggctaaaacgatactcattttgaaatggagggagtaga 38809941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 43388659 - 43388563
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtagatttt 149  Q
    |||||||| ||||||||||||||||||||||| ||| |||||| | ||||||||| |||||| || |||||||||| ||||||| | |||| |||||    
T  43388659 taaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagtacatttt 43388563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 775886 - 775807
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||||| ||||||||||||||||||||||| |||||||||| | | ||||||| |||||| || || |||||||||||    
T  775886 taaaattgttatgacatttgactactttattctattccttaatctgtatgcaattggctaaagcgacattcattttaaaa 775807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18719486 - 18719430
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  18719486 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 18719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37038823 - 37038767
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  37038823 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 37038767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 2459925 - 2460008
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||| ||||||||||||||||| ||||||||||  ||||  | || | ||||| | ||||||||||||||||||    
T  2459925 taaaattgctatgatatttgactactttattctattccttaatccatgtatatttggttaaaatgacactcattttaaaacgga 2460008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 42970071 - 42970122
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  42970071 cattccttaatatatgtgcaattggctaaaacgacacttattttaaaacgga 42970122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 1423291 - 1423348
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaatt 59  Q
    ||||||||||||| |||| ||||||| |||||||| |||||||||||||| |||||||    
T  1423291 ttattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaatt 1423348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 8540141 - 8540194
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| ||||||||||||  ||||||| |||||||||||||||||||||    
T  8540141 ttttttctttaatgaaaaacaaactaatagttgattaggataatttgataaaat 8540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 10195774 - 10195830
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| || ||||||||| |||||||| |||||||||||||| ||||||    
T  10195774 ttattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaat 10195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 33055990 - 33056046
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||| ||||||||| ||||||    
T  33055990 ttattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 33056046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 40987252 - 40987188
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtagatttt 149  Q
    ||||||||||||| |||||||| ||||||| || |||||||||||||||||| | |||| |||||    
T  40987252 cattccttaatatgtgtgcaatgagctaaagcgacactcattttaaaacggagggagtatatttt 40987188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 43480923 - 43480875
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  43480923 ttattttttctttaatgaaaaacaaaccaatagtttattaggataattt 43480875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 43971588 - 43971644
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||| | ||||||    
T  43971588 ttattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaat 43971644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 10580859 - 10580777
Alignment:
Q  52 ataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||   ||||||||| ||| |||||  ||||||||| |||||    
T  10580859 ataaaattgcgatgatatttgactattttattccattccttgatccgtgtgcaattggcttaaacgatactcattttgaaacg 10580777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 34225932 - 34225986
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatga 139  Q
    ||||||||||| ||||||||||| |||||| || |||||||||| ||||||||||    
T  34225932 cattccttaatctatgtgcaattggctaaagcgacactcattttgaaacggatga 34225986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 4658282 - 4658229
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||||||| ||||||| |||||| ||||||    
T  4658282 ttttttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaat 4658229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7872830 - 7872774
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||||||||||||||  || || |||||||| ||||||    
T  7872830 ttattttttctttaatgaaaaacaaatcaatagtcgatcagaataatttggtaaaat 7872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 11188303 - 11188247
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||  |||||||| |||||||||| ||| ||||||    
T  11188303 ttattttttctttaatgaaaaacaacccaatagttgattaggataacttggtaaaat 11188247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 27964278 - 27964222
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| ||||  |||||||| ||||||    
T  27964278 ttattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 27964222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 36685794 - 36685739
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||||||||||| |||| ||||| || |||||||||||||| ||||||    
T  36685794 ttattttttctttgatgaaaa-caaaccaataattgattaggataatttggtaaaat 36685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40608659 - 40608603
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||||||   |||||| |||||||||||||| ||||||    
T  40608659 ttattttttctttaatgaaaaacaaacttatagttgattaggataatttggtaaaat 40608603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 4566123 - 4566040
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| ||||| ||||||||| |||||| ||||  ||||| | |||| ||||  ||||| || ||||||||||||||||||    
T  4566123 taaaattgttatgatatttgactattttattacattttttaatctgtgtgtaattgactaaagcgacactcattttaaaacgga 4566040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 27726468 - 27726417
Alignment:
Q  7 ttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||| ||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  27726468 ttttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 27726417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 27726592 - 27726545
Alignment:
Q  4 attttttctttgatgaaaaacaaatcaatagttaattaggataatttg 51  Q
    ||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  27726592 attttttttttaatgaaaaacaaactaatagttaattaggataatttg 27726545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 40987417 - 40987456
Alignment:
Q  106 ttagctaaaacgccactcattttaaaacggatgaagtaga 145  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  40987417 ttagctaaaacgacactcattttaaaacggatggagtaga 40987456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 1360343 - 1360397
Alignment:
Q  78 tttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    ||||||||||| |||||| | |||||||||| |||||||| || |||||||||||    
T  1360343 tttattccattacttaatttgtgtgcaattaactaaaacgacattcattttaaaa 1360397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 17647013 - 17647051
Alignment:
Q  20 aaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  17647013 aaaacatatcaatagttaataaggataatttgataaaat 17647051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 19469628 - 19469678
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataa 55  Q
    |||||||||| |||||||||||||||||| || |||| |||||||| ||||    
T  19469628 ttttttctttaatgaaaaacaaatcaataattgattacgataatttaataa 19469678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 33093519 - 33093609
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| |||||||||| ||||||||||| |||| ||||||   ||| ||||| |||||| ||  |||||||| |||||| ||| ||||    
T  33093519 taaaattgttatgacatttaactactttatttcatttcttaatccgtgtacaattggctaaagcgatactcatttgaaaacgaatggagta 33093609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 14378204 - 14378167
Alignment:
Q  99 tgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||| || ||||||||||||||||||    
T  14378204 tgtgcaattagctaaagcgacactcattttaaaacgga 14378167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 41984571 - 41984610
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattcctta 93  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  41984571 taaaattgctatgacatttgacta-tttattccactcctta 41984610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 7e-49; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 42104116 - 42103982
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42104116 ttattttttctttaatgaaaaacaagtcaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatgtgt 42104017  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || |||||||||| |||||||    
T  42104016 gcaattggctaaagcgacactcattttgaaacgga 42103982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 39730046 - 39730178
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39730046 ttattttttctttaatgaaaaacaaacgaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatgtgt 39730145  T
Q  102 gcaattagctaaaacgccactcattttaaaacg 134  Q
    ||||||  |||||||| ||||||||||||||||    
T  39730146 gcaattgcctaaaacgacactcattttaaaacg 39730178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 6519080 - 6519211
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| |||| |    
T  6519080 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaattgttatgacattttactactttatttcattccttaatatgtgtgta 6519179  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    |||| |||||||| ||||||||||||||||||    
T  6519180 attaactaaaacgacactcattttaaaacgga 6519211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 14620547 - 14620405
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  14620547 ttattttttctttgatgaaaaacaaaccaataattgattaagataatttgataaaattgctatgacatttgactactttattctattccttaatatgtgt 14620448  T
Q  102 gcaattagctaaaacgccactcat-tttaaaacggatgaagta 143  Q
    |||||| |||||| || ||||||| ||| ||||||||||||||    
T  14620447 gcaattggctaaagcgacactcatatttgaaacggatgaagta 14620405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 3306062 - 3305927
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  3306062 ttattttttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaattgctatgacatttgactactttatttcattccttaatatacgt 3305963  T
Q  102 gcaattagctaaaacgccactcatttt-aaaacgga 136  Q
    |||||| | ||||||| |||||||||| ||||||||    
T  3305962 gcaattggttaaaacgacactcattttgaaaacgga 3305927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 8336457 - 8336330
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| || ||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |    
T  8336457 ttttttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttattccattccttaatatttgtgta 8336358  T
Q  105 attagctaaaacgccactcattttaaaa 132  Q
    ||| ||||||||| ||||||||||||||    
T  8336357 attggctaaaacgacactcattttaaaa 8336330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 42978126 - 42977996
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  42978126 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattccttaatctgtgt 42978027  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    | |||| ||||||||| |||||||| |||||    
T  42978026 gaaattggctaaaacgacactcattctaaaa 42977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 26660858 - 26660988
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||||||| |||||||| |||| || |||||| |||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  26660858 tttttctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattgctatgacatttgacaactttatttcattccttaatatgtgtgcaa 26660957  T
Q  106 ttagctaaaacgccactcattttaaaacgga 136  Q
    || |||||| || ||||||||||||||||||    
T  26660958 ttggctaaagcgacactcattttaaaacgga 26660988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 26932451 - 26932581
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||||||| |||||||| |||| || |||||| |||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  26932451 tttttctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattgctatgacatttgacaactttatttcattccttaatatgtgtgcaa 26932550  T
Q  106 ttagctaaaacgccactcattttaaaacgga 136  Q
    || |||||| || ||||||||||||||||||    
T  26932551 ttggctaaagcgacactcattttaaaacgga 26932581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 2729839 - 2729698
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| | | |    
T  2729839 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacgtttgactactttatttcattccttaatctgtat 2729740  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| |||||| || || ||||||| ||||||||| ||||    
T  2729739 gcaattggctaaagcgacaatcattttgaaacggatggagta 2729698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 34446080 - 34445952
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  34446080 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaatt-ctatgatatttgactactttatttcattccttaatatatgt 34445982  T
Q  102 gcaattagctaaaacgccactcattttaaa 131  Q
    |||||| | |||| || |||||||||||||    
T  34445981 gcaattggttaaagcgacactcattttaaa 34445952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 14005992 - 14006118
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||| |    
T  14005992 ttattttttctttaatgaaaaacaaaccaatatttgattaggataatttggtaaaatagctatgacatttgactactttatttcattccttaatatatat 14006091  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    |||||| |||||| |  ||||||||||    
T  14006092 gcaattggctaaagcaacactcatttt 14006118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 39566283 - 39566409
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||    
T  39566283 ttattttctctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatatgtgt 39566382  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    | |||| | |||| || ||||||||||    
T  39566383 gtaattggttaaagcgacactcatttt 39566409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 42661993 - 42661852
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || |||||||||  ||||||| |||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||| |||    
T  42661993 ttattttttctttaataaaaaacaaactaatagttgattaggataatttggtaaaattgttatgacatttgactattttatttcattccttaatatgtgt 42661894  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| |||||| || |||||||||| ||||| ||| ||||    
T  42661893 gcaattggctaaagcgacactcattttgaaacgaatggagta 42661852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 39335253 - 39335122
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||| |||||||||| ||| ||||    
T  39335253 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattattatgatatttgactactttattcaattccttaatttatatgca 39335154  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    |||  |||||||| || |||||||||||||||    
T  39335153 attgactaaaacgacattcattttaaaacgga 39335122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 34972703 - 34972569
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||| ||||||| || |||||||||| ||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||||  ||||| | |||    
T  34972703 ttattctttctttaataaaaaacaaattaatagttgattaggataatttggtaaaattgatacgacatttgactactttattccatttattaatctgtgt 34972604  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || ||||||||||||||||||    
T  34972603 gcaattggctaaagcgacactcattttaaaacgga 34972569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 27600499 - 27600624
Alignment:
Q  7 ttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaat 106  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||| ||||||| | |||| |||||||||||||||| ||||||||||||| ||| ||||    
T  27600499 ttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattacaatgatatttgactactttatttcattccttaatatgtgttcaat 27600598  T
Q  107 tagctaaaacgccactcattttaaaa 132  Q
    | ||||||  | ||||||||||||||    
T  27600599 tggctaaagtgacactcattttaaaa 27600624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 4425074 - 4425173
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||||| |||| | |||| ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  4425074 ttattttttctttaatgaaaaacaaatcgatagatgattaagataatttggtaaaattggtatgacatttgactactttattcaattccttaatatatgt 4425173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 21375700 - 21375569
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||||||||||||  ||||| | |||||||||||||| |||||||||||||| ||||||||| |||||||||||| ||||| | ||||||    
T  21375700 ttttttctttaatgaaaaacaaacaaataggtgattaggataatttggtaaaattgctatgatatttgactattttattccattctttaatctttgtgca 21375601  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    ||| ||||||  | |||||||||| |||||||    
T  21375600 attggctaaagtgacactcattttgaaacgga 21375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 29807364 - 29807233
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    ||||||||||  | ||||||||| |||||||| |||||||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||  ||||     
T  29807364 ttttttctttagtaaaaaacaaaccaatagttgattaggataatttggtaaaatttctattacatttgactaatttattccattccttaatatgcgtgct 29807265  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    ||| |||||| || |||| ||||| |||||||    
T  29807264 attggctaaagcgacacttattttgaaacgga 29807233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 13761823 - 13761952
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||| ||| |||||||| |||| ||||||||  ||||||||||  ||||||||| |||||||||||||| |||||| ||| ||||    
T  13761823 ttttttctttaatgaaaaataaaccaatagttgattaagataattttgtaaaattgct--gacatttgattactttattccatttcttaatttatttgca 13761920  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    |||  |||||||| || |||||||||||||||    
T  13761921 attgactaaaacgacattcattttaaaacgga 13761952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 793606 - 793531
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||    
T  793606 taaaattgctatgacattggactactttattccattccttaatttgtgtgcaattggctaaaacggcactcatttt 793531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 39504828 - 39504966
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    ||||||||||  |||||||||||  ||||||| ||||| |||||||| |||||||| || ||||||| ||||||||||| ||||| ||||||| |  | |    
T  39504828 ttttttctttattgaaaaacaaactaatagttgattagaataatttggtaaaattgttacgacattttactactttatttcattctttaatatgtacgta 39504927  T
Q  105 attagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||  ||||| || |||||||||||||||||||| ||||    
T  39504928 attgactaaagcgacactcattttaaaacggatggagta 39504966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 4833638 - 4833559
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||||| |||||||||| ||||||||||| |||||||||| |||||||||||| |||||| || ||||||||||||||    
T  4833638 taaaattgttatgacatttaactactttatttcattccttaacatatgtgcaattggctaaagcgacactcattttaaaa 4833559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 27652321 - 27652231
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| | |||| ||||  ||||| || |||||||||||||||||||||||||    
T  27652321 taaaattgttatgacatttgactattttattccatttcttaatctgtgtgtaattgcctaaagcgacactcattttaaaacggatgaagta 27652231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 42329546 - 42329462
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggat 137  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| | |||| ||  ||||||||| ||||||||    
T  42329546 taaaattgctatgacatttgactactttatttcattccttaatttgtgtgcaattggttaaagcgatactcattttgaaacggat 42329462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 29653514 - 29653435
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||||||||||||||||||||| |||||| ||||| |||||   | ||||||| ||||||||| ||||||||||||||    
T  29653514 taaaattgctatgacatttgactattttatttcattctttaatccgtatgcaattggctaaaacgacactcattttaaaa 29653435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 36296134 - 36296051
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||| |||||||| || |||||| ||||| |||||  |||||||||| |||||| || ||||||||||||||||||    
T  36296134 taaaattgctattacatttgattattttatttcattctttaatccatgtgcaattggctaaagcgacactcattttaaaacgga 36296051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7579643 - 7579591
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  7579643 tttttctttaatgaaaaacaaatcaatagttgattaggataatttgaaaaaat 7579591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34534458 - 34534514
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  34534458 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 34534514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 36164986 - 36165042
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||| ||||||    
T  36164986 ttattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 36165042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 24436509 - 24436459
Alignment:
Q  86 attccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  24436509 attccttaatctatgtgcaattggctaaaacgacactcattttaaaacgga 24436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 4911165 - 4911112
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  4911165 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 4911112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 843117 - 843173
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||| ||||||| |||||||| |||||||||||||| ||||||    
T  843117 ttattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaat 843173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1309412 - 1309356
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||| |||||||||||| ||| |||| ||||||||||||||||    
T  1309412 ttattttttctttaatgataaacaaatcaattgttgattatgataatttgataaaat 1309356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 4751500 - 4751452
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  4751500 cattccttaatatgtgtgcaattggctaaaacgacactcattttaaaac 4751452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 32963011 - 32962931
Alignment:
Q  52 ataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||| |||||||||| ||||||||| |||| ||||  ||||| | ||||||||||| |||| || ||||||||||||||    
T  32963011 ataaaactgctatgacaattgactactctatttcattaattaatctgtgtgcaattagttaaagcgacactcattttaaaa 32962931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 4371529 - 4371584
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||| | ||||||||||| ||||||| |||||||||| |||||||    
T  4371529 attccattccttaatttgtgtgcaattagttaaaacgacactcattttgaaacgga 4371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 11977687 - 11977742
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaa 57  Q
    ||||||||||||| ||||| |||||| |||||||| |||||||||||||| |||||    
T  11977687 ttattttttctttaatgaacaacaaaccaatagttgattaggataatttggtaaaa 11977742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 21319360 - 21319305
Alignment:
Q  7 ttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgct 62  Q
    |||| ||| |||||||||||| |||||||| |||||||||||||| ||||||||||    
T  21319360 ttttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 21319305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 28591680 - 28591620
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatag----ttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||||||||||    ||||||||||||||||| ||||||    
T  28591680 ttattttttctttaatgaaaaacaaatcaatagttgattaattaggataatttggtaaaat 28591620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 38982124 - 38982066
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||| | ||||||||| ||||||||| || ||||||| ||||||||||||||    
T  38982124 cattccttaatttgtgtgcaattggctaaaacgacattcattttgaaacggatgaagta 38982066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 7748951 - 7748902
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttg 51  Q
    ||||||||||||| |||||||||||| ||||| |||||||| ||||||||    
T  7748951 ttattttttctttaatgaaaaacaaaccaataattaattagaataatttg 7748902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 4742236 - 4742188
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||||||||| |||||||||  |||||||| |||||||||||||||    
T  4742236 cattccttaatatgtgtgcaattgactaaaacgacactcattttaaaac 4742188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 27797881 - 27797933
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| |||||||||||| |||||||| |||| ||||||||| ||||||    
T  27797881 tttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 27797933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 38362191 - 38362143
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    ||||||||||||| || ||||| ||| ||||||||||||||||||||||    
T  38362191 ttattttttctttaataaaaaataaaacaatagttaattaggataattt 38362143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 33693913 - 33693964
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||| |||||||||||| |||| ||||||||| |||| |||||||||||||    
T  33693913 cattctttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 33693964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 33822503 - 33822420
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||| ||||||||||| |||||| ||||  ||||| | ||||||||| | |||||||  | ||||||| |||||||    
T  33822503 taaaattgctataacatttgactattttatttcattaattaatctgtgtgcaattggttaaaacgatattcattttgaaacgga 33822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 8961004 - 8960954
Alignment:
Q  86 attccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||||| ||||   ||||||| ||||||||||||||||||    
T  8961004 attccttaatatatgtgtaattgagtaaaacgacactcattttaaaacgga 8960954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 13974376 - 13974429
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| ||| ||||||||  ||||||| |||||||||||||| ||||||    
T  13974376 ttttttctttaatggaaaacaaacaaatagttgattaggataatttggtaaaat 13974429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 42978227 - 42978264
Alignment:
Q  106 ttagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  42978227 ttagctaaaacgacactcattttaaaacggaggaagta 42978264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 7721194 - 7721250
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| | || ||||||| ||||| || |||||||||||||| ||||||    
T  7721194 ttattttttctttaaagacaaacaaaccaataattgattaggataatttgttaaaat 7721250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 7736473 - 7736529
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||| ||  ||||||| ||||||||||| || ||||||    
T  7736473 ttattttttctttaatgaaaaacgaactaatagttgattaggataatatggtaaaat 7736529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 14161954 - 14161898
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||| ||| || |||||  ||| ||||||||||||||||    
T  14161954 ttattttttctttaatgaaaaataaaccagtagttgtttatgataatttgataaaat 14161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 15167065 - 15167009
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||  || |||||||| | |||||||||||| ||||||    
T  15167065 ttattttttctttaatgaaaaattaaccaatagttgactaggataatttggtaaaat 15167009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 36660608 - 36660656
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||||||| | |||||||||||||||| || |||||||||| ||||    
T  36660608 cattccttaatctgtgtgcaattagctaaagcgacactcattttgaaac 36660656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 41645339 - 41645391
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| |||||||||||| |||| ||| ||||  |||||||||||||||    
T  41645339 tttttctttaatgaaaaacaaaccaatggttgattaaaataatttgataaaat 41645391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 4760608 - 4760471
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  4760608 tttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattccttaatctatgtgcaa 4760509  T
Q  106 ttagctaaaacgccactcattttaaaacggatgaagta 143  Q
    || |||||| || |||||||||||||||||||| ||||    
T  4760508 ttggctaaagcgacactcattttaaaacggatggagta 4760471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 40228674 - 40228809
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  40228674 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatatatgt 40228773  T
Q  102 gcaattagctaaaacgccactcattttaaaacggat 137  Q
    ||||||  |||||| | |||||||||| ||||||||    
T  40228774 gcaattgactaaaatgacactcattttgaaacggat 40228809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 31899301 - 31899175
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| ||| |||||||| |||||||||||||||||    
T  31899301 ttatcttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatgacattcgacaactttatttcattccttaatatatgt 31899202  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    |||||| |||||| || ||||||||||    
T  31899201 gcaattggctaaagcgacactcatttt 31899175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 39463358 - 39463491
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  39463358 ttattttttctttaatgaaaaacaaaccaacagttgattaggataattgg-taaaattgctacgacatttgactactttattccattccttaatatgtgt 39463456  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || |||||||||| |||||||    
T  39463457 gcaattggctaaagcgacactcattttgaaacgga 39463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 39698719 - 39698588
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||| |||    
T  39698719 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctataacatttgactactttatttcataccttaatatgtgt 39698620  T
Q  102 gcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||  |||||  | |||||||||||||||    
T  39698619 gcaattgcctaaagagacactcattttaaaac 39698588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 9304686 - 9304553
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| ||||||| ||| |||| ||| |||    
T  9304686 ttattttttctttaa-gaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgacatttaactattttattcaatttcttattatgtgt 9304588  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| ||||||| | ||||||||||||||||||    
T  9304587 gcaattggctaaaatgacactcattttaaaacgga 9304553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 9880554 - 9880420
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||| | |||    
T  9880554 ttattttttctttaatgaaaaataaatcaatagttgattaggataatttcgtaaaattgctatgacatttgaccactttattccatttcttaatctgtgt 9880455  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| | |||| || |||||||||| |||||||    
T  9880454 gcaattggttaaagcgacactcattttgaaacgga 9880420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 29025802 - 29025676
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||| ||||||||||||||||||||  |||||||||| |||||||||||| |||    
T  29025802 ttattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgacatttgtgtactttattctattccttaatatgtgt 29025703  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    ||||||   ||||||| ||||||||||    
T  29025702 gcaattgattaaaacgacactcatttt 29025676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 43448816 - 43448957
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||| |||    
T  43448816 ttattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgatatgacatttgactactttatttcattcattaatatgtgt 43448915  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    | ||||  ||||| || ||| |||||| ||||||||| ||||    
T  43448916 gtaattgactaaagcgacacccattttgaaacggatggagta 43448957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 4989578 - 4989704
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||  ||||||||||||| |||||||||||||||||||||| ||||||| | |    
T  4989578 ttattttttctttaatgaaaaacaaatcaatagttgagtaggataatttgggaaaattgctatgatatttgactactttattccattctttaatatgtat 4989677  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    |||||| | |||| ||  |||||||||    
T  4989678 gcaattggttaaagcgaaactcatttt 4989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 17921060 - 17921162
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  17921060 ttttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgctatgacatttgactattttattcaattccttaatatgtgtgca 17921159  T
Q  105 att 107  Q
    |||    
T  17921160 att 17921162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 43084680 - 43084550
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  43084680 ttattttttctttaatgaaacacaaaccaatagttgattagggtaatttggtaaaattactatgacatttgactactttatttcattccttaatatgtgt 43084581  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    ||||||  |||||  | |||| |||||||||    
T  43084580 gcaattgactaaagtgacacttattttaaaa 43084550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 44713634 - 44713736
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| |||  ||||||| |||| ||||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  44713634 ttattttttctttaatgaaaaataaactaatagttgattatgataatttggtaaagttgctatgacatttgactactttatttcattccttaatctatgt 44713733  T
Q  102 gca 104  Q
    |||    
T  44713734 gca 44713736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 36669847 - 36669766
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttatt 83  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  36669847 ttattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgctatgatatttgactactttatt 36669766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 7839558 - 7839687
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| ||| |||||||| |||| ||||||| | ||||||||  |||| |||||||||||||||| ||||||||||| | |||    
T  7839558 ttattttttctttaatgaaaaataaaccaatagttgattaagataattcggtaaaattgtcatgatatttgactactttatttcattccttaatgtgtgt 7839657  T
Q  102 gcaattagctaaaacgccactcattttaaaacg 134  Q
      |||| | ||||||| ||||||||||||||||    
T  7839658 --aatt-gttaaaacgacactcattttaaaacg 7839687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 8471409 - 8471490
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||||| |||||||||||||||||||||| |||| |||||| ||||||||||| |||||| || |||||||||| |||||    
T  8471409 taaaattggtatgacatttgactactttatttcatttcttaatctatgtgcaattggctaaagcgacactcattttgaaacg 8471490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 31693675 - 31693545
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaata---gttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatata 98  Q
    ||||||| ||||| ||||||||||||  ||||   ||| |||||||||||||  |||||||| ||||||||||||||||||||||  ||||||||| ||     
T  31693675 ttattttatctttaatgaaaaacaaactaataccagttgattaggataatttagtaaaattgttatgacatttgactactttattatattccttaacatg 31693576  T
Q  99 tgtgcaattagctaaaacgccactcatttta 129  Q
    |||||| || |||||| || || ||||||||    
T  31693575 tgtgcagttggctaaagcgacattcatttta 31693545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 34168214 - 34168131
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||||||||||||||||||| ||||||||||   |||| |||| |||||| || |||||||||| |||||||    
T  34168214 taaaattgctatgacatttgactactttattcaattccttaatccgtgtgtaattggctaaagcgacactcattttgaaacgga 34168131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 5790696 - 5790606
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaat 95  Q
    |||||||| | ||||||| |||| |||||||| |||||||||||||| ||||||||||| || ||||||||| ||||||| ||| ||||||    
T  5790696 ttttttctctaatgaaaagcaaaccaatagttgattaggataatttggtaaaattgctacgatatttgactattttattctatttcttaat 5790606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 14541748 - 14541658
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| |||||||||||||||||||||||||||  ||||| | | ||||||| ||||||| |  ||||||||||||| ||||||||||    
T  14541748 taaaattgttatgacatttgactactttattccattatttaatctgtatgcaattggctaaaatgatactcattttaaaatggatgaagta 14541658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 27416653 - 27416743
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||||||||||||||||||||||||  |||||||||| |  ||||||||  || || || ||||||||| |||||||||||||||    
T  27416653 taaaattgctatgacatttgactactttattatattccttaatctgcgtgcaattgactgaagcgacactcatttaaaaacggatgaagta 27416743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 8382464 - 8382399
Alignment:
Q  78 tttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  8382464 tttatttcattctttaatttatgtgcaattagctaaaacgacactcattttaaaacggatggagta 8382399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 18673101 - 18673015
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatga 139  Q
    |||||||| |||||||||||||||||||||| |||| |||||| | |||| |||| |||| | || |||||||||||||| ||||||    
T  18673101 taaaattgttatgacatttgactactttatttcatttcttaatttgtgtgtaattggctagagcgacactcattttaaaatggatga 18673015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 34461584 - 34461503
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||||| ||||||||||||||| |||||| ||||||||||| | ||| ||||| |||||| || |||||||||| |||||    
T  34461584 taaaattgttatgacatttgactattttatttcattccttaatctgtgtacaattggctaaagcgacactcattttgaaacg 34461503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 43970105 - 43970049
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||||||||||    
T  43970105 ttattttttctttaataaaagacaaatcaatagttgattaggataatttgataaaat 43970049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 9812274 - 9812328
Alignment:
Q  4 attttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  9812274 attttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9812328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 41415014 - 41415072
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||||||||||||||| ||||||||| || | ||||||||||||||| ||||    
T  41415014 cattccttaatatatgtgcaattggctaaaacgacatttattttaaaacggatggagta 41415072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34156634 - 34156690
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||| ||| |||| ||||||||||||||||    
T  34156634 ttattttttctttaatgaaaaacaaaccaatggttgattatgataatttgataaaat 34156690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 34796731 - 34796679
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||| ||| |||||||||||| |||||||| |||||||||||||||||||||    
T  34796731 tttttttttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 34796679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 14234269 - 14234220
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttg 51  Q
    ||||||||||||| | |||||||||| |||||||| ||||||||||||||    
T  14234269 ttattttttctttaacgaaaaacaaaccaatagttgattaggataatttg 14234220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 15750380 - 15750327
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||| ||||||    
T  15750380 ttttttctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 15750327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 514976 - 515032
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||| |||||| | |||||||||||| |||||||| |||||||||||||| ||||||    
T  514976 ttatattttctataatgaaaaacaaaccaatagttgattaggataatttgctaaaat 515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6374512 - 6374568
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||||||||| ||||||    
T  6374512 ttattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 6374568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 32271661 - 32271738
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||||||||| | ||||| | |||||||| |||||||  || | |||||||||| |||||||| ||||||||||||||    
T  32271661 taaaattgctataagatttgtcaactttatttcattcct--atctgtgtgcaattaactaaaacgacactcattttaaaa 32271738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40399931 - 40399875
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||||||||| ||||||    
T  40399931 ttattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 40399875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 41679411 - 41679467
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||| |||| |||||||| |||| ||||||||| ||||||    
T  41679411 ttattttttctttaatgaaaatcaaaccaatagttgattatgataatttggtaaaat 41679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 42179194 - 42179242
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  42179194 ttattttttctttaatgaaaaacaaactaatagttaattatgataattt 42179242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 9022574 - 9022629
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||  ||||| | ||||||||| ||||||||| ||||||||||||||||||    
T  9022574 attccattttttaatctgtgtgcaattggctaaaacgacactcattttaaaacgga 9022629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 11168834 - 11168917
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||| |||||||||  | ||| ||||||||||| | |||| || | |||||| || |||||||||| |||||||    
T  11168834 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 11168917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 13109139 - 13109198
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagcta 112  Q
    ||||||| ||||||||||||| || |||||| ||||||||||| | ||||||||| ||||    
T  13109139 taaaattactatgacatttgaatattttatttcattccttaatttgtgtgcaattggcta 13109198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 29312244 - 29312197
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatt 49  Q
    ||||||||||||| |||||||||||| |||||||| ||||| ||||||    
T  29312244 ttattttttctttaatgaaaaacaaaccaatagttgattagtataatt 29312197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 36915543 - 36915598
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||| | | ||||||| | ||||||| ||||||||||||||||||    
T  36915543 attccattccttaatctgtatgcaattggttaaaacgacactcattttaaaacgga 36915598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 39970498 - 39970545
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    ||||| ||||| ||||||||||| ||||||||| ||||||||||||||    
T  39970498 cattctttaatttatgtgcaattggctaaaacgacactcattttaaaa 39970545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 14234382 - 14234416
Alignment:
Q  109 gctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||| |||||||||||||||||||||||||    
T  14234382 gctaaaacgacactcattttaaaacggatgaagta 14234416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 32326695 - 32326637
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||| | |||||||||  ||||| || |||||||||||||||||||| ||||    
T  32326695 cattccttaatctgtgtgcaattgactaaagcgacactcattttaaaacggatgtagta 32326637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 5295456 - 5295403
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||| || || ||||||||| |||||||| |||||||||||||| ||||||    
T  5295456 ttttttcattaataaaaaacaaagcaatagttgattaggataatttggtaaaat 5295403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13496337 - 13496393
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||  | |||||||||| ||||| || |||||||||||||| ||||||    
T  13496337 ttattttttcttgaaagaaaaacaaaccaataattgattaggataatttggtaaaat 13496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 147
Target Start/End: Complemental strand, 37185595 - 37185567
Alignment:
Q  119 cactcattttaaaacggatgaagtagatt 147  Q
    |||||||||||||||||||||||||||||    
T  37185595 cactcattttaaaacggatgaagtagatt 37185567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 43561422 - 43561478
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||| |||| |||  || |||| ||||||||||||||||    
T  43561422 ttattttttctttaatgaaaaataaattaatgattgattaagataatttgataaaat 43561478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 27653774 - 27653915
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  27653774 ttattttttctttaatgaaaaacaactcaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatttgtgt 27653873  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| |||||| || |||||||||| |||| |||||||||    
T  27653874 gcaattggctaaagcgacactcattttgaaacagatgaagta 27653915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 53814554 - 53814413
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  53814554 ttattttttctttaatgaaaaacaaatcaataattgattaggataatttggtaaaattgctatgacatttgactactttatttcattccttaatatgtgt 53814455  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    || ||| | ||||||| |||||||||||||||||||| ||||    
T  53814454 gcgattggttaaaacgacactcattttaaaacggatggagta 53814413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 52957847 - 52957713
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  52957847 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatctgtgt 52957748  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || |||||||||| |||||||    
T  52957747 gcaattggctaaagcgacactcattttgaaacgga 52957713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 37654509 - 37654654
Alignment:
Q  2 ttattttttctttgatgaaaaa-caaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatg 100  Q
    ||||||||||||| |||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  37654509 ttattttttctttaatgaaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattccttaatatgtg 37654608  T
Q  101 tgcaattagctaaaacgccactcattttaaaacggatgaagtagat 146  Q
    ||||||| ||||||||| |||||||||| ||||||| | |||||||    
T  37654609 tgcaattggctaaaacgacactcattttgaaacggagggagtagat 37654654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 2728455 - 2728314
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||| | |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  2728455 ttattttttctttaatgaaaaacacaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttattcaattccttaatatgtgt 2728356  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| |||||| || |||||||||| ||||||||| ||||    
T  2728355 gcaattggctaaagcgacactcattttgaaacggatggagta 2728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 50623187 - 50623318
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| |||| |    
T  50623187 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgatatgacatttgactactctatttcattccttaatatgtgtgta 50623286  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    |||  |||||||| ||||||||||||||||||    
T  50623287 attgactaaaacgacactcattttaaaacgga 50623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 54042240 - 54042098
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaa-tatatg 100  Q
    ||||| ||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||| ||    
T  54042240 ttattatttctttaatgaaaaacaaaccaatagttgattatgataatttgataaaattgctacgacatttgactattttattccatttcttaattatgtg 54042141  T
Q  101 tgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||    
T  54042140 tgcaattggctaaaacgacactcattttaaaacggatggagta 54042098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 2493202 - 2493343
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||| |||||||| |||||||||||  |||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  2493202 ttatcttttctttaatgaaaaacaacccaatagttgattaggataatctggtaaaattgctatgacatttgactactttatttcattccttaatatgtgt 2493301  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| || |||||| |||||||||| ||||||||| ||||    
T  2493302 gcaattggcaaaaacgacactcattttgaaacggatggagta 2493343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 40010926 - 40010793
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  40010926 ttttttctttaatataaaacaaatcaatagttaattaggataattttgtaaaattgctatgacatttgactactttattccattccttaatatgtgtgta 40010827  T
Q  105 attagctaaaacgccactcattttaaaacggatg 138  Q
    ||   |||||||| |||||||||| |||||||||    
T  40010826 atggactaaaacgacactcattttgaaacggatg 40010793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 41920366 - 41920217
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| ||||| |||||||| |||||||||||| ||||| |||||||| ||||||||| ||||||| |||    
T  41920366 ttattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgctattacattcgactacttgattccattctttaatatgtgt 41920267  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagtagattttaa 151  Q
    |||||||||||||| | |||| ||||| ||||||| | ||||||||||||    
T  41920266 gcaattagctaaaatgacacttattttgaaacggagggagtagattttaa 41920217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 39984923 - 39985051
Alignment:
Q  8 tttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaatt 107  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||    
T  39984923 tttctttaatgaaaaacaaatcaatagttgattagaataatttgataaaattgctatgacatttgactattttattcaattccttaatatgtatgcaatt 39985022  T
Q  108 agctaaaacgccactcattttaaaacgga 136  Q
     |||||| || |||||||||| |||||||    
T  39985023 ggctaaagcgacactcattttgaaacgga 39985051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 24940983 - 24941114
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| || ||||||    
T  24940983 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttattccattctttaacatgtgtgca 24941082  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    ||| | ||||||| |||||||||| |||||||    
T  24941083 attggttaaaacgacactcattttgaaacgga 24941114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 45043645 - 45043514
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| || |||    
T  45043645 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttattacattccttaaaatgtgt 45043546  T
Q  102 gcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||  |||||||| |||| ||||| ||||    
T  45043545 gcaattgactaaaacgacacttattttgaaac 45043514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 1819662 - 1819804
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| | |||    
T  1819662 ttattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattctttaatctgtgt 1819761  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagtag 144  Q
     |||||  ||||| || || ||||||||||||||| |||||||    
T  1819762 tcaattgactaaagcgacattcattttaaaacggaggaagtag 1819804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 52848111 - 52847977
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| | | |    
T  52848111 ttattttttctttaatgaaaaacaagccaatagttgattaggataatttggtaaaattgctatgacatttgactactttattcaatttcttaatctgtat 52848012  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| ||||||||  ||||||||||||||||||    
T  52848011 gcaattggctaaaacaacactcattttaaaacgga 52847977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 29519582 - 29519441
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||| || |||||||| |||||  ||||||| |||||||| ||||| ||||||||| |||||| ||||||||||||| |||    
T  29519582 ttattttttctttaatgaaaaacgaaccaatagtttattagagtaatttggtaaaattgttatgatatttgactattttatttcattccttaatatgtgt 29519483  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    | |||| ||||||||| |||||||||||||||||||||||||    
T  29519482 gtaattggctaaaacgacactcattttaaaacggatgaagta 29519441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 19878748 - 19878882
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| | ||     
T  19878748 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgattactttattccattccttaatctctgc 19878847  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || || ||||||| |||||||    
T  19878848 gcaattggctaaagcgacattcattttgaaacgga 19878882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 19930814 - 19930951
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||||| |||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||| |||||| |||||||||     
T  19930814 ttatttttcctttaatgaaaaacaaaccaatagttgattaagataatttgataaaattgctatgacatttaactattttatttcattcc-taatatatgc 19930912  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaa 140  Q
    ||||||  |||||||| || |||||||||||||||||||    
T  19930913 gcaattgactaaaacgacagtcattttaaaacggatgaa 19930951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 28734698 - 28734824
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| ||||| || ||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||    
T  28734698 ttattttttctttaatgaaaaacaaaccaataattgattaggataatttgataaaattattatgacatttgactactttattcaattctttaatatatgt 28734797  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    |||||| | |||| || ||||||||||    
T  28734798 gcaattggttaaagcgacactcatttt 28734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 49080534 - 49080400
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||  |||||||||||| |||    
T  49080534 ttattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattactatgacatttgactactttattttattccttaatatgtgt 49080435  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| | |||| || |||| ||||| |||||||    
T  49080434 gcaattggataaagcgacacttattttgaaacgga 49080400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 18430089 - 18430230
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| | ||||||||||  ||||||| |||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||    
T  18430089 ttattttttctttaaagaaaaacaaacgaatagttgattatgataatttggtaaaattgttatgacatttgactactttatttcattccttaatatgtgt 18430188  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| |||||| |  |||||||||| ||||||| ||||||    
T  18430189 gcaattggctaaagcaacactcattttgaaacggaggaagta 18430230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 29370707 - 29370808
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  29370707 tttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaa 29370806  T
Q  106 tt 107  Q
    ||    
T  29370807 tt 29370808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 56373632 - 56373491
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||  ||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |    
T  56373632 ttattttttctttaatgaaaaacaaaataattgttgattaggataatttggtaaaattgctacgacatttgactactttattccattccttaatatgtct 56373533  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
     ||||| ||||||  | |||||||||| ||||||||| ||||    
T  56373532 tcaattggctaaagtgacactcattttgaaacggatggagta 56373491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 20448139 - 20448251
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| |||    
T  20448139 ttattttttctttaatgaaaatcaaaccaatagttgattaggataatttggtaaaattgctatgacatttaactactttattcaattccttaatatgtgt 20448238  T
Q  102 gcaattagctaaa 114  Q
    |||||| ||||||    
T  20448239 gcaattggctaaa 20448251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 42605672 - 42605806
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||| ||||||  |||| ||||| | |||    
T  42605672 ttattttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgacatttgactattttattttattctttaatctgtgt 42605771  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||  |||||||| | ||||||||||||||||    
T  42605772 gcaattgactaaaacgacgctcattttaaaacgga 42605806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 49089563 - 49089693
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||  |||||||| ||||| |||||||||| ||||| ||||||||||||| |||    
T  49089563 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattgttatgatatttgactacattatttcattccttaatatgtgt 49089662  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    ||||||   ||||||| ||||||||||||||    
T  49089663 gcaattgattaaaacgacactcattttaaaa 49089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 40345399 - 40345270
Alignment:
Q  7 ttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaat 106  Q
    |||||||| || ||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||| ||||| | ||||||||    
T  40345399 ttttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattgatatgacatttgactactttatttcattcattaatttgtgtgcaat 40345300  T
Q  107 tagctaaaacgccactcattttaaaacgga 136  Q
    | |||||| || || |||||||||||||||    
T  40345299 tggctaaagcgacattcattttaaaacgga 40345270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 38991818 - 38991679
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||  |||||||||||| ||||  || |||||||||||||| |||||||| |||||||||| ||||||||||| |||| |||||| | |||    
T  38991818 ttattttttcttgaatgaaaaacaaaccaat--ttgattaggataatttggtaaaattgttatgacatttaactactttattacatttcttaatctgtgt 38991721  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||  |||||||| |||||||||||||||||| ||||||    
T  38991720 gcaattgactaaaacgacactcattttaaaacggaggaagta 38991679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 24259760 - 24259850
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| | |||| || |||||||||||||||||||||||||    
T  24259760 taaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattggataaagcgacactcattttaaaacggatgaagta 24259850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 52253948 - 52254048
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||| | |||||||| |||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||| |||    
T  52253948 ttattttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaattactatgacatttgacaactttatttcattccttaatatgtgt 52254047  T
Q  102 g 102  Q
    |    
T  52254048 g 52254048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 34316322 - 34316454
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||| ||  ||||||||||||| |||||| ||||||||||| | |||    
T  34316322 ttattctttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaatggc--tgacatttgactattttatttcattccttaatctgtgt 34316419  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| | ||||  | |||||||||| |||||||    
T  34316420 gcaattggttaaagtgacactcattttgaaacgga 34316454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 44571922 - 44571792
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||| ||| |||||||| |||| ||||||||| ||||||| |||||||||||||||| |||||| ||||| ||||||| | |    
T  44571922 ttattttttctttaatgaaaaataaaccaatagttgattaagataatttggtaaaattactatgacatttgactattttatttcattcattaatatgttt 44571823  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
    |||||| | ||||  | ||||||||||||||    
T  44571822 gcaattggttaaagagacactcattttaaaa 44571792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 55126646 - 55126736
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||||||||| || ||||||||||||||||| ||||    
T  55126646 taaaattgctatgacatttgactactttatttcattccttaatcaatgtgcaattggctaaaacgacattcattttaaaacggatggagta 55126736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 45889712 - 45889796
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggat 137  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||    
T  45889712 taaaattgctataacatttgactactttatttcattccttaatatgtgtgcaattggctaaaacgacactcattttgaaacggat 45889796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 47321294 - 47321377
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||||||||||| ||||||| |||||||||| | ||||||||| ||||||||| ||||||||||||||||||    
T  47321294 taaaattgctatgacatttgactattttattcaattccttaatctgtgtgcaattggctaaaacgacactcattttaaaacgga 47321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 51434261 - 51434169
Alignment:
Q  52 ataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtag 144  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||| || || ||||||||||||||| |||||||    
T  51434261 ataaaattgttatgaaatttgactactttattccattccttaatatatatgcaattggttaaagcgacattcattttaaaacggaggaagtag 51434169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 19282413 - 19282329
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggat 137  Q
    |||||||| ||||||||||||||||||||||||||||||||||   ||||||||| |||||| || | |||||||||||||||||    
T  19282413 taaaattgttatgacatttgactactttattccattccttaatccgtgtgcaattggctaaagcgacgctcattttaaaacggat 19282329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 34124444 - 34124540
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtagatttt 149  Q
    |||||||| ||||||||||||||||||||||| ||| |||||| | ||||||||| |||||| || |||||||||| ||||||| |||||| |||||    
T  34124444 taaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggaggaagtaaatttt 34124540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 28116394 - 28116484
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||  | |||||||||| ||||||||| ||||    
T  28116394 taaaattgctatgacatttgactactttattccattccttaatccgtgtgcaattggttaaagtgacactcattttgaaacggatggagta 28116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 17499720 - 17499637
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| ||||||||||||||| |||||| ||||| ||||| | |||||||||  |||||||| ||||||||||||||||||    
T  17499720 taaaattgttatgacatttgactattttatttcattcattaatctgtgtgcaattgactaaaacgacactcattttaaaacgga 17499637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 6462165 - 6462259
Alignment:
Q  55 aaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtagatttt 149  Q
    |||||||||||| |||||||||||||||| | || |||||| | ||||||||| ||||||||| | |||||||| ||||||||| |||| |||||    
T  6462165 aaattgctatgaaatttgactactttattacttttcttaatctgtgtgcaattggctaaaacgaccctcattttgaaacggatggagtatatttt 6462259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 4408180 - 4408099
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||| |||| || || ||||||| |||||    
T  4408180 taaaattgttatgacacttgactactttatttcattccttaatttatgtgcaattagttaaagcgacattcattttgaaacg 4408099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 34534096 - 34534021
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||||| | |||| |||||    
T  34534096 taaaattgctatgacatttgattactttattcaattccttaatctgagtgcaattagctaaaatgacacttatttt 34534021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 54233965 - 54234048
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| ||||| |||||| |||||||||||||| |||||| | | ||||||| |||||| || |||||||||| |||||||    
T  54233965 taaaattgatatgatatttgagtactttattccatttcttaatttgtatgcaattggctaaagcgacactcattttgaaacgga 54234048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 30022239 - 30022293
Alignment:
Q  78 tttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  30022239 tttatttcattccttaatctatgtgcaatttgctaaaacgacactcattttaaaa 30022293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 30780074 - 30780029
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||    
T  30780074 ttttttctttaatgaaaaacaaatcaatagttgattaggataattt 30780029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 31941706 - 31941743
Alignment:
Q  52 ataaaattgctatgacatttgactactttattccattc 89  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31941706 ataaaattgctatgacatttgactactttattccattc 31941743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 40837235 - 40837317
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattc 89  Q
    |||||||||| |||||||||||||||||   | |||| ||||||||| ||||| |||  |||||||||||||||||||| |||||    
T  40837235 ttttttctttaatgaaaaacaaatcaatgagtgattaagataatttggtaaaactgc--tgacatttgactactttatttcattc 40837317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 45839740 - 45839793
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||    
T  45839740 ttttttctttaatgaaaaacaaatcaattgttgattaggataatttggtaaaat 45839793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 50203173 - 50203222
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttg 51  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  50203173 ttattttttctttaatgaaaaacaaatcaatagttgattatgataatttg 50203222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 10573212 - 10573156
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| || ||||||| ||||||||||||| |||||||||||||| ||||||    
T  10573212 ttattttttcattaatgaaaatcaaatcaatagttgattaggataatttggtaaaat 10573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 8971145 - 8971198
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||||||| |||| ||||||||| ||||||    
T  8971145 ttttttctttaatgaaaaacaaaccaatagtttattaagataatttggtaaaat 8971198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 30261358 - 30261414
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| ||||  |||||||| ||||||    
T  30261358 ttattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 30261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 44868309 - 44868253
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||| ||||| ||| ||||||||||||||||| ||||||| |||||| ||||||    
T  44868309 ttattttatctttaatggaaaacaaatcaatagttgattaggacaatttggtaaaat 44868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 52162203 - 52162259
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| ||||| || |||| ||||||||| ||||||    
T  52162203 ttattttttctttaatgaaaaacaaaccaatatttgattaagataatttggtaaaat 52162259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 29840230 - 29840285
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||| | ||||||||| | ||||||| |||||||||| |||||||    
T  29840230 attccattccttaatttgtgtgcaattgggtaaaacgacactcattttgaaacgga 29840285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 30492895 - 30492950
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||| | ||||||||| ||||||||  |||||||||| |||||||    
T  30492895 attccattccttaatttgtgtgcaattggctaaaaccacactcattttgaaacgga 30492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 55548223 - 55548136
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaa 140  Q
    |||||||| ||| ||||||||||| |||||| ||||||||  |||| || ||||| | |||||||  ||||||||| |||| ||||||    
T  55548223 taaaattgttataacatttgactattttatttcattccttgttataggtacaattggttaaaacgatactcattttgaaacagatgaa 55548136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 22212520 - 22212578
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||||| ||| ||||| |||||| || ||| |||||||||||||||| ||||    
T  22212520 cattccttaatatgtgttcaattggctaaagcgacacccattttaaaacggatggagta 22212578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 31987490 - 31987527
Alignment:
Q  101 tgcaattagctaaaacgccactcattttaaaacggatg 138  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  31987490 tgcaattaactaaaacgacactcattttaaaacggatg 31987527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 32140849 - 32140796
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatg 138  Q
    ||||||||||| | |||||||||  |||||||| |||||||||| |||||||||    
T  32140849 cattccttaatttgtgtgcaattgactaaaacgacactcattttgaaacggatg 32140796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 46392120 - 46392063
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaatt 59  Q
    ||||||||| ||| ||  |||||||| |||||||| |||||||||||||| |||||||    
T  46392120 ttattttttatttaatagaaaacaaaccaatagttgattaggataatttggtaaaatt 46392063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 47817841 - 47817894
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||||||| |||| ||||| ||| ||||||    
T  47817841 ttttttctttaatgaaaaacaaaccaatagttgattatgataaattggtaaaat 47817894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 11364325 - 11364381
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||| ||||  |||||||||||| ||||| ||||||| ||||||||| ||||||    
T  11364325 ttattttctcttcaatgaaaaacaaaccaataattaattaagataatttggtaaaat 11364381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 19451262 - 19451206
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| ||||| || |||||| || |||| ||||||    
T  19451262 ttattttttctttaatgaaaaacaaaccaataattgattaggctattttggtaaaat 19451206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 36805423 - 36805376
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||||||| | ||||||||||| ||||||| |||||||||||||||    
T  36805423 cattccttaatctgtgtgcaattag-taaaacgacactcattttaaaac 36805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 45043759 - 45043799
Alignment:
Q  111 taaaacgccactcattttaaaacggatgaagtagattttaa 151  Q
    ||||||| |||||||||||||||||||| |||| |||||||    
T  45043759 taaaacgacactcattttaaaacggatggagtatattttaa 45043799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 45049878 - 45049926
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    ||||||||||| |||||||||||   ||||||| |||||||||||||||    
T  45049878 cattccttaatttatgtgcaattgattaaaacgtcactcattttaaaac 45049926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 31491819 - 31491687
Alignment:
Q  4 attttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgc 103  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||    
T  31491819 attttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgctatgacatttgactactttattccattcctgaatatgtttgc 31491720  T
Q  104 aattagctaaaacgccactcattttaaaacgga 136  Q
    |||| ||||||||| ||||||||||||||||||    
T  31491719 aatttgctaaaacgacactcattttaaaacgga 31491687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 9915543 - 9915678
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttga-taaaattgctatgacatttgactactttattccattccttaatatatg 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  9915543 ttattttttctttaatgaaaaacaaatcaatagttgattaggataatttgggtaaaattgctatgacatttgactactttattacattccttaatatgtg 9915642  T
Q  101 tgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||  ||||||||||||| |||||||||| |||||||    
T  9915643 tgttattagctaaaacgacactcattttgaaacgga 9915678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 5463675 - 5463821
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||| ||||| |||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  5463675 ttattttttctttaatgaaaaacaaaccaatagttgattaggattatttggtaaaattgttatgacaattgactactttattgcattccttaatatatgt 5463774  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagtagattt 148  Q
    |||||| |||||| || |||||||||| ||||||||| |||| ||||    
T  5463775 gcaattggctaaagcgacactcattttgaaacggatggagtatattt 5463821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 10842880 - 10843021
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  10842880 ttattttttctttaatgaaaaacaaactaatagttgattaagataatttggtaaaattgctatgacatttgactactttatttcattccttaatatttgt 10842979  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||  |||||||| |||||||||| ||||||||| ||||    
T  10842980 gcaattgactaaaacgacactcattttgaaacggatggagta 10843021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 32806989 - 32806855
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32806989 ttattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaattgctatgacatttgactactttattccattccttaatatgtgt 32806890  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||| | |||||| || || ||||||| |||||||    
T  32806889 gcaactggctaaagcgacaatcattttgaaacgga 32806855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 15823134 - 15823266
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| || ||||| |||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||| |||    
T  15823134 ttattttttctttaatgaaaaacaaaccattagttgattaggataatttggtaaaattgctatgacatttaactattttattccatttcttaatatgtgt 15823233  T
Q  102 gcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||| |||||||||  |||||||||||||||    
T  15823234 gcaattggctaaaacgatactcattttaaaacg 15823266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 15573716 - 15573854
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| | ||||||    
T  15573716 ttttttctttaatgaaaaacaaaccaatagataattaggataatttggtaaaattgctataacatttgactactttattccattctttaatttgtgtgca 15573815  T
Q  105 attagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||| ||||||||| || ||||||| ||||| | ||||||    
T  15573816 attggctaaaacgacattcattttgaaacgaaggaagta 15573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 49468762 - 49468636
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| | |||    
T  49468762 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactattttatttcattccttaatctgtgt 49468663  T
Q  102 gcaattagctaaaacgccactcatttt 128  Q
    |||||| |||||| || ||||||||||    
T  49468662 gcaattggctaaagcgacactcatttt 49468636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 48009110 - 48009259
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||| ||||||| |||||| ||||||||| |||||| ||||||||||||| |||    
T  48009110 ttattttttctttattgaaaaacaaaccaatagttgattaggataatttggtaaaattactatgatatttgactattttatttcattccttaatatgtgt 48009209  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagtagattttaa 151  Q
    ||||||  |||||||| |||||||||| ||||||| ||| || |||||||    
T  48009210 gcaattgactaaaacgacactcattttgaaacggaggaaatatattttaa 48009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 43759432 - 43759525
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaat 95  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  43759432 ttattttttctttaatgaaaaaccaatcaatagttaattaggataatttgataaaattgctattacatttgactactttatttcattccttaat 43759525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 44108704 - 44108849
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| |||||||||||| ||||||||  ||||||||||||| |||||||| |||||||||| |||||||| || ||||||||||||| ||||||    
T  44108704 ttttttctttaatgaaaaacaaaccaatagttgtttaggataatttggtaaaattgttatgacatttaactactttgtttcattccttaatatgtgtgca 44108803  T
Q  105 attagctaaaacgccactcattttaaaacggatgaagtagatttta 150  Q
    ||| ||||||  | |||||||||| ||||||||| |||| ||||||    
T  44108804 attggctaaagtgtcactcattttgaaacggatggagtatatttta 44108849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 52125187 - 52125046
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||| ||| |||||||||||| |||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||| |||| |||| ||| | |    
T  52125187 ttattttttgtttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgctacgacatttgactactttattacatttcttattatgtat 52125088  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
     ||||| ||||||||| |||||||||||||||||||| ||||    
T  52125087 acaattggctaaaacgacactcattttaaaacggatggagta 52125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 35847984 - 35847846
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||||||||||||   ||||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  35847984 ttattttttctttga---aaaacaaatcaatagttgattaagataatttggtaaaattgttatgacatttgactactttattcaattccttaatatgtgt 35847888  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||   |||| || ||||||||| |||||||||| ||||    
T  35847887 gcaattgagtaaagcgacactcatttcaaaacggatggagta 35847846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 46046073 - 46046207
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||| |||||| ||||||| ||||| ||||||| |||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||||    
T  46046073 ttatttattctttaatgaaaatcaaattaatagttgattaggataatttggtaaaattgctacgacgtttgactactttattgtattccttaatatatgt 46046172  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| ||||||||| || ||||| | |||||||    
T  46046173 gcaattggctaaaacgacattcattctgaaacgga 46046207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 49426466 - 49426329
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaa 105  Q
    ||||| ||| ||||| |||||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| |||||||    
T  49426466 tttttttttaatgaagaacaaaccaatagttgattaggataatttggtaaaattgatatcacatttgactacttcattccattccttaatatgtgtgcaa 49426367  T
Q  106 ttagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||  ||||| || |||||||||| ||||||||| ||||    
T  49426366 ttgcctaaagcgacactcattttgaaacggatggagta 49426329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 46286867 - 46286743
Alignment:
Q  4 attttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgc 103  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||| |||||||| |||||    
T  46286867 attttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaagtgctatgacatttgtctactttattctatttcttaatatgtgtgc 46286768  T
Q  104 aattagctaaaacgccactcatttt 128  Q
    ||||   ||||||| ||||||||||    
T  46286767 aattgattaaaacgacactcatttt 46286743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 50094333 - 50094459
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||||||| |||| |||||||| |||||||||||||| ||||||| |||| |||||| |||||||||||| ||||||||||||  |||||    
T  50094333 ttttttctttaatgaaaagcaaaccaatagttgattaggataatttggtaaaattactattacatttaactactttattcaattccttaatatgcgtgca 50094432  T
Q  105 attagctaaaacgccactcattttaaa 131  Q
    ||| | |||| || |||||||||||||    
T  50094433 attggttaaagcgacactcattttaaa 50094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 43358238 - 43358133
Alignment:
Q  29 caatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||  |||||||| || |||||||    
T  43358238 caatagttgattaagataatttggtaaaattgctatgacatttgactattttatttcattccttaatatatgtacaattgactaaaacgacattcatttt 43358139  T
Q  129 aaaacg 134  Q
    ||||||    
T  43358138 aaaacg 43358133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 52066338 - 52066239
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||| ||| ||||||||||||||||||||| |||| ||||||||| ||||||| |||| |||||||||||||||||| |||| |||||||||||||||    
T  52066338 ttttttgtttaatgaaaaacaaatcaatagttgattaagataatttggtaaaatttctattacatttgactactttatttcatttcttaatatatgtgca 52066239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 38530890 - 38530760
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||  ||||||||||  ||||||||||||||||||| |||| |||||| | | |    
T  38530890 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattgctgcgacatttgactactttatttcatttcttaatctgtat 38530791  T
Q  102 gcaattagctaaaacgccactcattttaaaa 132  Q
      |||| |||||| || ||||||||||||||    
T  38530790 ataattggctaaagcgacactcattttaaaa 38530760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 48025305 - 48025171
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| | ||||||||||  ||||||| |||||||||||||| |||||||||||  | ||||||||||||||||||||||| |||| | |||    
T  48025305 ttattttttctttaaagaaaaacaaacaaatagtttattaggataatttggtaaaattgctacaatatttgactactttattccattccataatgtgtgt 48025206  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| | |||| || |||  |||||||||||||    
T  48025205 gcaattggttaaagcgacacctattttaaaacgga 48025171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 34110627 - 34110763
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||  || | ||||||||||||||||| ||||| ||||| | | |    
T  34110627 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttgattaaattattacgtcatttgactactttatttcattcattaatttgtat 34110726  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatg 138  Q
    | |||| |||||||||   |||||||| |||||||||    
T  34110727 gtaattggctaaaacgtttctcattttgaaacggatg 34110763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 1740688 - 1740557
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| || |||||||||  ||||||| |||| ||||||||| |||||||| ||| |||||||| ||||||||||||||| |||||||  ||| |    
T  1740688 ttttttctttaataaaaaacaaactaatagttgattatgataatttggtaaaattgttattacatttgagtactttattccattctttaatatgcgtgta 1740589  T
Q  105 attagctaaaacgccactcattttaaaacgga 136  Q
    ||| ||||||||| || ||||||| |||||||    
T  1740588 attggctaaaacgacattcattttgaaacgga 1740557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 25151909 - 25152051
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatc-aatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatg 100  Q
    ||||||||||||| |||||||| ||| | ||||||| ||||| |||||||| ||||||| |||||||||||||||||||||||| |||| ||||| | ||    
T  25151909 ttattttttctttaatgaaaaaaaaaaccaatagttgattagtataatttggtaaaattactatgacatttgactactttattctattctttaatctgtg 25152008  T
Q  101 tgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||| | ||||  | |||| ||||| ||||| ||||||||    
T  25152009 tgcaattggttaaagtgacacttattttgaaacgaatgaagta 25152051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 31798693 - 31798776
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccatt 88  Q
    |||||||||| |||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  31798693 ttttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgacatttgactacttaatttcatt 31798776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 40717367 - 40717272
Alignment:
Q  48 tttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||||| |||||||||   ||||||| |||| ||||||||| ||||||||||    
T  40717367 tttggtaaaattgctatgatatttgactactttattccattccgtaatatgtgtgcaattgattaaaacgacacttattttaaaatggatgaagta 40717272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 49894932 - 49895022
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| ||||||||||||||| |||||||||||||||||| | ||||||||| || |||||| |||||||||||||| ||||| ||||    
T  49894932 taaaattgttatgacatttgactattttattccattccttaatctgtgtgcaattggccaaaacgacactcattttaaaatggatggagta 49895022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 7214073 - 7213951
Alignment:
Q  19 aaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaat---atatgtgc--aattagctaa 113  Q
    |||||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||||||||||| |||||||||||   ||||||||  ||||  ||||    
T  7214073 aaaaacaaataaatagttgattagaataatttggtaaaattgctatgatatttgactactttatttcattccttaatgtaatatgtgcgtaattgactaa 7213974  T
Q  114 aacgccactcattttaaaacgga 136  Q
    || | |||||||||| |||||||    
T  7213973 aaggacactcattttgaaacgga 7213951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 11134452 - 11134387
Alignment:
Q  63 atgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  11134452 atgacatttgactactttattccattccttaatatgtgtgcaattggctaaaacgacactcatttt 11134387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 24611567 - 24611483
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattc 89  Q
    |||||||||| |||||||||||| |||||||| |||||| ||||||  |||||||| |||||||||||||||||||||| |||||    
T  24611567 ttttttctttaatgaaaaacaaaccaatagttgattagggtaatttagtaaaattgttatgacatttgactactttatttcattc 24611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 28200224 - 28200141
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||||||||||||||||| ||||||||| ||| |||||| | ||||||||| |||||| || ||||||||||||||||||    
T  28200224 taaaattgctatgacatttgacaactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttaaaacgga 28200141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 50591320 - 50591229
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtag 144  Q
    |||||||| |||||||||| ||||||||||||||||||||||| | ||| ||||| |||||| || |||||||||||||||| ||| |||||    
T  50591320 taaaattgttatgacattttactactttattccattccttaatctgtgtacaattggctaaagcgacactcattttaaaacgaatggagtag 50591229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 22665087 - 22665169
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgg 135  Q
    |||||||||||||| |||||||||||||||||||||| ||||| | |||||||||  ||||| || |||||||||||||||||    
T  22665087 taaaattgctatgatatttgactactttattccattcgttaatctgtgtgcaattgactaaagcgacactcattttaaaacgg 22665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 44582780 - 44582699
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||||| |||||||||||||||||||||| ||||| ||||| | |||||||||  ||||| || ||||||||||||||||    
T  44582780 taaaattgttatgacatttgactactttatttcattcattaatctgtgtgcaattcactaaagcgacactcattttaaaacg 44582699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 27209088 - 27209144
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  27209088 ttattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 27209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 5854226 - 5854143
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| |||||||||| |||||||||||| |||||||||| | ||||||||| ||||||  | |||||||||| |||||||    
T  5854226 taaaattgttatgacatttaactactttattctattccttaatctgtgtgcaattggctaaagtgacactcattttgaaacgga 5854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 9552357 - 9552269
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||  ||  |||| |||| ||||||||||||||| ||||    
T  9552357 taaaattgctatgacatttgactactttatttcattcattaatctatgtacaattgact--aacgacacttattttaaaacggatggagta 9552269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8895067 - 8895011
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  8895067 ttattttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 8895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 30686811 - 30686875
Alignment:
Q  79 ttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||||||||||||| |||| ||||    
T  30686811 ttattccatttcttaatctgtgtgcaattagctaaaacgacactcattttaaaacagatggagta 30686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 254913 - 254830
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||||||||||||||||| | |||| |||||| | |||| ||||  ||||| || |||||||||| |||||||    
T  254913 taaaattgctatgacatttgactactttagttcatttcttaatctgtgtgtaattgactaaagcgacactcattttgaaacgga 254830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 672284 - 672209
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    |||||||| ||||| ||||||||||||||||||||||  |||| | ||||||||| | ||||||| ||||||||||    
T  672284 taaaattgatatgatatttgactactttattccattctataatctgtgtgcaattggttaaaacgacactcatttt 672209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 2459156 - 2459239
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||||| |||||||||||||||||| |||  ||| |||||| | ||||||||| |||||| || |||||||||| |||||||    
T  2459156 taaaattgttatgacatttgactacttcatttaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgga 2459239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 26252270 - 26252353
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||| ||||||||||||||||| || |||||||||||| | ||||||||| | |||| |  |||||||||| |||||||    
T  26252270 taaaattgcaatgacatttgactacttaatcccattccttaatctgtgtgcaattggttaaagcaacactcattttgaaacgga 26252353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 9333230 - 9333272
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaat 95  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  9333230 taaaattgctatgacatttgactactttatttcattccttaat 9333272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 9357003 - 9357045
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaat 95  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  9357003 taaaattgctatgacatttgactactttatttcattccttaat 9357045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 29567995 - 29568051
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| ||||| |||||||| ||||||    
T  29567995 ttattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 29568051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 31699341 - 31699285
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||| ||||||||| ||||||    
T  31699341 ttattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 31699285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 6377256 - 6377205
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||| ||||||||||| |||||| || ||||||||||||||||||    
T  6377256 cattccttaatttatgtgcaattggctaaagcgacactcattttaaaacgga 6377205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 42650251 - 42650176
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    ||||||||||||||||||||| ||||||||| || || ||||| | ||||||||| |||||| || || |||||||    
T  42650251 taaaattgctatgacatttgattactttatttcagtctttaatctgtgtgcaattggctaaagcgacattcatttt 42650176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 31699253 - 31699200
Alignment:
Q  90 cttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||| ||||||||| | ||||||| |||||||||||||||| ||||||||    
T  31699253 cttaatatgtgtgcaattggttaaaacgacactcattttaaaacgaatgaagta 31699200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 45749476 - 45749411
Alignment:
Q  78 tttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||||   |||||| ||||||||||| |||| || |||||||||||||||||||| ||||    
T  45749476 tttattccattatgtaatatgtgtgcaattagttaaagcgacactcattttaaaacggatggagta 45749411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 5225873 - 5225821
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||    
T  5225873 tttttctttaatgaaaaataaaccaatagttaattatgataatttggtaaaat 5225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8989691 - 8989635
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| ||||  |||||||| ||||||    
T  8989691 ttattttttctttaatgaaaaacaaaccaatagttgattataataatttggtaaaat 8989635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 25560924 - 25560868
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||||||||| ||||||    
T  25560924 ttattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 25560868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 26595117 - 26595065
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| |||||||||||| ||||| || |||||||||||||| ||||||    
T  26595117 tttttctttaatgaaaaacaaaccaataattgattaggataatttggtaaaat 26595065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 28751385 - 28751330
Alignment:
Q  78 tttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaac 133  Q
    |||||| ||||||||||| | ||||||||| ||||||||| |||||||||| ||||    
T  28751385 tttatttcattccttaatctgtgtgcaattggctaaaacgacactcattttgaaac 28751330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 40719197 - 40719252
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaa 140  Q
    ||||||||||  | ||||||||| ||||||||| ||||||||| ||||||||||||    
T  40719197 cattccttaacttgtgtgcaattggctaaaacgacactcatttcaaaacggatgaa 40719252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 13408299 - 13408253
Alignment:
Q  90 cttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| | ||||||||| ||||||||| ||||||||||||||||||    
T  13408299 cttaatttgtgtgcaattggctaaaacgacactcattttaaaacgga 13408253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 15647043 - 15646977
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtagattttaa 151  Q
    ||||||||||| | |||||||||  |||||||| ||||||||||||||| || | |||| |||||||    
T  15647043 cattccttaatttgtgtgcaattgactaaaacgacactcattttaaaacagagggagtacattttaa 15646977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 27721065 - 27721103
Alignment:
Q  20 aaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  27721065 aaaactaatcaatagttaataaggataatttgataaaat 27721103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 27721180 - 27721218
Alignment:
Q  20 aaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  27721180 aaaactaatcaatagttaataaggataatttgataaaat 27721218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 9092694 - 9092739
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    |||||||||| |||||||||||||||||| || ||||| |||||||    
T  9092694 ttttttctttaatgaaaaacaaatcaatatttgattagaataattt 9092739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 12851907 - 12851972
Alignment:
Q  78 tttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| ||||||||||| | |||| |||| |||||| || |||| ||||||||||||||| ||||    
T  12851907 tttatttcattccttaatctttgtgtaattggctaaagcgacacttattttaaaacggatggagta 12851972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 24040998 - 24040945
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacg 134  Q
    |||||||||||||||  ||||| |||| |||||| || ||||||||||||||||    
T  24040998 attccattccttaatccatgtgaaattggctaaagcgacactcattttaaaacg 24040945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 47696140 - 47696107
Alignment:
Q  25 aaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||||||||||| |||||||||||||||    
T  47696140 aaatcaatagttaattagaataatttgataaaat 47696107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 5094 - 5134
Alignment:
Q  18 gaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||| |||||||||||||| ||||||    
T  5094 gaaaaacaaaccaatagttgattaggataatttggtaaaat 5134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 19675081 - 19675210
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||    
T  19675081 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgacatttgactactttattcaattccttaatatgtgttca 19675180  T
Q  105 attagctaaaacgccactcattttaaaacg 134  Q
    ||| | |||| || ||||||||||||||||    
T  19675181 attggttaaagcgacactcattttaaaacg 19675210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 1135025 - 1135159
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| | ||||||||||  ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||    
T  1135025 ttattttttctttaaagaaaaacaaacaaatagttgattaggataatttggtaaaattgatatgacatttgactactttattccattccttaatatgtgt 1135124  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| |  |||| ||||| |||||||    
T  1135125 gcaattggctaaagcaacacttattttgaaacgga 1135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 24163767 - 24163625
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaa-tatatg 100  Q
    ||||| ||||||| ||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||| ||    
T  24163767 ttattatttctttaatgaaaaacaaactaatagttgatttggataatttgataaaattgctatgacatttgactattttatttcatttcttaattatgtg 24163668  T
Q  101 tgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||    
T  24163667 tgcaattggctaaaacgacactcactttaaaacggatggagta 24163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 23259378 - 23259244
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||||||||||||  |||||| ||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||| |||| |||||| | |||    
T  23259378 ttattttttctttagtgaaaagcaaatcaatagttgattaggataatttggtaaaattgttacgacatttgactactttatttcatttcttaatctgtgt 23259279  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||| ||  | |||||| ||||||||    
T  23259278 gcaattagctaaagcgaaattcatttcaaaacgga 23259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 24555977 - 24555838
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgca 104  Q
    |||||| ||| ||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||| ||| |||||| | | ||||    
T  24555977 ttttttttttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgctacgacatttgactactttattctatttcttaatctgtatgca 24555878  T
Q  105 attagctaaaacgccactca-ttttaaaacggatgaagta 143  Q
    ||| | |||| || |||||| |||||||||||||| ||||    
T  24555877 atttgttaaagcgacactcatttttaaaacggatggagta 24555838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 10520443 - 10520309
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||| ||| |||| ||||||  ||||| || |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  10520443 ttattttttatttaatgagaaacaatccaatatttgattaagataatttggtaaaattgctatgacatttgactactttatttcattccttaatatgtgt 10520344  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
     ||||| | |||| || ||||||||||| ||||||    
T  10520343 acaattggttaaagcgacactcattttacaacgga 10520309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 10540529 - 10540442
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattc 89  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  10540529 ttattttttctttaatgaaaaacaaatcaatagttgattatgataatttaataaaattgttatgatatttgactactttattccattc 10540442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 29713459 - 29713325
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| || |||||||||  ||||||| ||||||||||||   ||||||| | || |||||||||||||| ||||||||||||||||  |||    
T  29713459 ttattttttctttaataaaaaacaaactaatagttgattaggataattatgtaaaattaccataacatttgactacttgattccattccttaatacgtgt 29713360  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||  ||||| || ||||||||||||||||||    
T  29713359 gcaattgactaaagcgacactcattttaaaacgga 29713325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 34513652 - 34513569
Alignment:
Q  61 ctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagtag 144  Q
    |||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||| |||||    
T  34513652 ctatgacatttagctactttattccatttcttaatatgtgtgcaattagctaaaacgacacttattttaaaacggatgtagtag 34513569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 234134 - 234274
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||         ||||||||||||||||| |||||   |||    
T  234134 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgcta---------actactttattccattctttaatccgtgt 234224  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagtagattttaa 151  Q
    |||||| | ||||||| |||||||||| ||||| | | |||| |||||||    
T  234225 gcaattggttaaaacgacactcattttgaaacgaagggagtacattttaa 234274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 25932781 - 25932866
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatg 138  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||   |||| |||| ||||||||| |||| |||||||||||||||    
T  25932781 taaaattgctatgacatttaactactttatttcatttcttaatcggtgtgtaattggctaaaacgacacttattttaaaacggatg 25932866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 31443498 - 31443439
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgc 61  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||| |||||||||    
T  31443498 ttattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattgc 31443439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 17345136 - 17345061
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||||||||||||||| ||||||||||||||||||||||     ||||||||| |||||| || ||||||||||||||    
T  17345136 taaaattgctatgacattcgactactttattccattcctta----gtgtgcaattggctaaagcgacactcattttaaaa 17345061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 18737141 - 18737087
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaa 56  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  18737141 ttattttttctttaatgaaaaataaaacaatagttaattaggataatttgataaa 18737087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 9940747 - 9940803
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  9940747 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9940803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 34576696 - 34576771
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    |||||||| |||||||| ||||||||||||| |||||    |||||||||||||| ||||||||| |||| |||||||||    
T  34576696 taaaattgttatgacatctgactactttatttcattc----atatatgtgcaattggctaaaacgacacttattttaaaa 34576771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 26189664 - 26189733
Alignment:
Q  56 aattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcat 125  Q
    |||||||||||||||| ||||||||||| |||||||||| || |||||||||  ||||| || |||||||    
T  26189664 aattgctatgacatttaactactttatttcattccttaacatgtgtgcaattgtctaaagcgacactcat 26189733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 32619878 - 32619825
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataa 55  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||    
T  32619878 ttattttttctttaatgaaaaacaaatcaatagttgattaagataatttaataa 32619825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1502806 - 1502750
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||||||| ||||||    
T  1502806 ttattttttatttaatgaaaaacaaaccaatagttaattaagataatttggtaaaat 1502750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 20226274 - 20226218
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||| |||||| ||||||||||||||||||||| ||||| |||||||| ||||||    
T  20226274 ttatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 20226218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 22120258 - 22120202
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||| |||||| ||||||||||||||||||||| ||||| |||||||| ||||||    
T  22120258 ttatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 22120202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 16128060 - 16128006
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaa 56  Q
    ||||||||||||| |||||||||||| | |||||| |||||||||| ||||||||    
T  16128060 ttattttttctttaatgaaaaacaaaccgatagttgattaggataaattgataaa 16128006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 17552297 - 17552243
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaatt 59  Q
    |||||||||| |||||||||||| |||| ||| |||||||||||||| |||||||    
T  17552297 ttttttctttaatgaaaaacaaaccaattgttgattaggataatttggtaaaatt 17552243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 30627264 - 30627322
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    ||||| ||||| | |||||||||| |||||||| |||||||||||||||||| ||||||    
T  30627264 cattcattaatttgtgtgcaattatctaaaacgacactcattttaaaacggaggaagta 30627322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 577164 - 577209
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||    
T  577164 ttttttctttaatgaaaaacaaaccaatagttgattaggataattt 577209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 8957867 - 8957916
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttg 51  Q
    ||||||||||||| || ||||||||| |||||||| ||||||||||||||    
T  8957867 ttattttttctttaataaaaaacaaaccaatagttgattaggataatttg 8957916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 8961490 - 8961441
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttg 51  Q
    ||||||||||||| || ||||||||| |||||||| ||||||||||||||    
T  8961490 ttattttttctttaataaaaaacaaaccaatagttgattaggataatttg 8961441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 12459369 - 12459316
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||| | |||||||| |||||||||||||| ||||||    
T  12459369 ttttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaat 12459316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 13503893 - 13503841
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||    
T  13503893 ttttttctttaatgaaaaacaaa-caatagtttattaggataatttggtaaaat 13503841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 3988797 - 3988741
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||||||||| ||||||    
T  3988797 ttattttttctttaatgaaaaacaaacaaatagttgattatgataatttggtaaaat 3988741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 21271452 - 21271400
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| ||||| ||||||||||||||| ||||||||| |||| ||||||    
T  21271452 tttttctttaatgaagaacaaatcaatagttgattaggatactttggtaaaat 21271400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 12322920 - 12322881
Alignment:
Q  19 aaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  12322920 aaaaaaaaatcaatagttaattaggataatttggtaaaat 12322881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 13011400 - 13011345
Alignment:
Q  3 tattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||||||||||| |||||||||||| | |||||| |||| ||||||||| ||||||    
T  13011400 tattttttctttaatgaaaaacaaaccgatagttgattaagataatttggtaaaat 13011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 6992553 - 6992631
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaa 131  Q
    ||||||| ||||||  |||||||| |||||| |||| |||||| | |||||||||  ||||| | ||||||||||||||    
T  6992553 taaaattactatgatgtttgactattttatttcatttcttaatctgtgtgcaattgactaaagcaccactcattttaaa 6992631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 10540670 - 10540707
Alignment:
Q  106 ttagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  10540670 ttagctaaaacgacactcattttaaaacggaggaagta 10540707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 17828386 - 17828438
Alignment:
Q  6 tttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||| |||||||||||| |||| ||| |||| ||||||||| ||||||    
T  17828386 tttttctttaatgaaaaacaaaccaatggttgattaagataatttggtaaaat 17828438  T

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Target: scaffold0110 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 24793 - 24652
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    |||| |||||||| |||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| |||    
T  24793 ttatcttttctttaatgaaaaacaaaccaatagttgattaggatagtttggtaaaattgctatgacatttgactattttattccattccttaatatgtgt 24694  T
Q  102 gcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
     ||| | |||||| || |||||||||||||||||||| ||||    
T  24693 acaaatggctaaagcgacactcattttaaaacggatggagta 24652  T

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Target: scaffold0048 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 62740 - 62859
Alignment:
Q  9 ttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgtgcaatta 108  Q
    |||||| |||||||||||| |||||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||     
T  62740 ttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaattgttatgacatttgactactttattccattccttaatatgtgtgcaattg 62839  T
Q  109 gctaaaacgccactcatttt 128  Q
    |||||| || ||||||||||    
T  62840 gctaaagcgacactcatttt 62859  T

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Target: scaffold0015 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 21134 - 21000
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaatatatgt 101  Q
    ||||||| | ||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||  |||||||||| |||||    
T  21134 ttattttctttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacgtttgactattttattttattccttaatctatgt 21035  T
Q  102 gcaattagctaaaacgccactcattttaaaacgga 136  Q
    |||||| |||||| || |||| |||||||||||||    
T  21034 gcaattggctaaagcgacactaattttaaaacgga 21000  T

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Target: scaffold0294 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 3557 - 3465
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaa 94  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||    
T  3557 ttattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgctataacatttgactattttattcaattcattaa 3465  T

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Target: scaffold0078 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 1448 - 1371
Alignment:
Q  55 aaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||||  |||||  | ||||||||||||||    
T  1448 aaattgctatgacatttgactactttatttcattccttaatctgtgtgcaattgactaaagtgacactcattttaaaa 1371  T

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Target: scaffold0758 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 6326 - 6246
Alignment:
Q  56 aattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||| |||||||||||||||||||||| |||||||||||   ||||||||||||||||  | |||||||||| |||||||    
T  6326 aattgttatgacatttgactactttatttcattccttaatccgtgtgcaattagctaaagtgacactcattttgaaacgga 6246  T

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Target: scaffold0565 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 9695 - 9627
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaattgctatgacatt 70  Q
    ||||||||||||| ||||||||||| ||||||||| |||| ||||||||| |||||||| |||||||||    
T  9695 ttattttttctttaatgaaaaacaactcaatagttgattatgataatttggtaaaattgttatgacatt 9627  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 9630 - 9579
Alignment:
Q  85 cattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||| |||| |||| ||||||||| |||||||||| |||||||    
T  9630 cattccttaatatgtgtgtaattggctaaaacgacactcattttgaaacgga 9579  T

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Target: scaffold0565; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 10008 - 9952
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||||||| | ||||||||||  ||||||| |||| ||||||||| ||||||    
T  10008 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 9952  T

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Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 321878 - 321953
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcatttt 128  Q
    ||||||| |||||| |||||||||||||||||||||||||||    |||||||||||||||| || ||||||||||    
T  321878 taaaattactatgatatttgactactttattccattccttaacccgtgtgcaattagctaaagcgacactcatttt 321953  T

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Target: scaffold2107 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 418 - 344
Alignment:
Q  21 aaacaaatcaatagttaattaggataatttgataaaattgctatgacatttgactactttattccattccttaat 95  Q
    |||||||||||||||| |||| |||||| || ||||| ||  |||||||||||||||||||||  ||||||||||    
T  418 aaacaaatcaatagttgattaagataatgtggtaaaaatgtcatgacatttgactactttatttgattccttaat 344  T

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Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 70455 - 70372
Alignment:
Q  53 taaaattgctatgacatttgactactttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||  |||||||||||||||||||||| ||| |||||| | | ||||||| | || | || ||||||||||||||||||    
T  70455 taaaattgtcatgacatttgactactttattcaatttcttaatctgtatgcaattggttatagcgacactcattttaaaacgga 70372  T

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Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 9647 - 9692
Alignment:
Q  5 ttttttctttgatgaaaaacaaatcaatagttaattaggataattt 50  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||    
T  9647 ttttttctttaatgaaaaacaaaccaatagttgattaggataattt 9692  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 62993 - 63046
Alignment:
Q  79 ttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaa 132  Q
    ||||||||||| ||||| ||||||||||| ||||||| | ||||||||||||||    
T  62993 ttattccattcattaatctatgtgcaattggctaaaatgacactcattttaaaa 63046  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 158265 - 158329
Alignment:
Q  78 tttattccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacggatgaagta 143  Q
    |||||| ||||| ||||| | ||| ||||| ||||||||| |||||||||||||||||||||||||    
T  158265 tttatttcattctttaatttgtgt-caattggctaaaacgacactcattttaaaacggatgaagta 158329  T

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Target: scaffold0182 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18308 - 18252
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||| ||||| |||||||||||| |||||||| ||||  |||||||||||||||    
T  18308 ttattttatctttaatgaaaaacaaaccaatagttgattaaaataatttgataaaat 18252  T

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Target: scaffold0072 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 12056 - 12001
Alignment:
Q  81 attccattccttaatatatgtgcaattagctaaaacgccactcattttaaaacgga 136  Q
    ||||||||||||||| | ||||||||| |||||| || |||||||||| |||||||    
T  12056 attccattccttaatctctgtgcaattcgctaaagcgacactcattttgaaacgga 12001  T

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Target: scaffold0502 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 625 - 569
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    ||||||||  ||| |||||||| |||||||||||| |||| ||||||||| ||||||    
T  625 ttatttttgttttaatgaaaaagaaatcaatagttgattatgataatttggtaaaat 569  T

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Target: scaffold0300 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 4664 - 4720
Alignment:
Q  2 ttattttttctttgatgaaaaacaaatcaatagttaattaggataatttgataaaat 58  Q
    |||| ||| |||| || |||||||||||||||||| ||||||||| |||| ||||||    
T  4664 ttatatttactttaataaaaaacaaatcaatagttgattaggatagtttggtaaaat 4720  T

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