View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1343_low_6 (Length: 805)

Name: NF1343_low_6
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1343_low_6
NF1343_low_6
[»] chr8 (55 HSPs)
chr8 (18-353)||(45349412-45349749)
chr8 (24-325)||(17629869-17630169)
chr8 (592-723)||(39571203-39571334)
chr8 (592-722)||(15888352-15888482)
chr8 (590-723)||(6552654-6552787)
chr8 (590-722)||(33289259-33289391)
chr8 (592-722)||(54612-54742)
chr8 (592-722)||(2890162-2890292)
chr8 (592-722)||(7012171-7012301)
chr8 (592-722)||(7785778-7785908)
chr8 (592-722)||(3304278-3304408)
chr8 (592-722)||(7805699-7805829)
chr8 (592-722)||(43199354-43199484)
chr8 (592-722)||(44498187-44498317)
chr8 (592-722)||(12763654-12763784)
chr8 (592-722)||(25601000-25601130)
chr8 (592-722)||(32114475-32114605)
chr8 (592-722)||(32211363-32211493)
chr8 (598-723)||(12343146-12343271)
chr8 (592-722)||(31654613-31654743)
chr8 (592-722)||(13578857-13578987)
chr8 (132-220)||(28245018-28245106)
chr8 (415-519)||(45349233-45349337)
chr8 (592-722)||(8587170-8587300)
chr8 (18-80)||(28245101-28245163)
chr8 (585-673)||(27422239-27422327)
chr8 (718-778)||(45349104-45349164)
chr8 (663-722)||(4245652-4245711)
chr8 (592-719)||(28463614-28463741)
chr8 (603-710)||(24691990-24692096)
chr8 (584-646)||(8587162-8587224)
chr8 (246-315)||(28244881-28244951)
chr8 (592-722)||(33057594-33057724)
chr8 (607-717)||(17006916-17007026)
chr8 (607-717)||(17570221-17570331)
chr8 (689-722)||(6899419-6899452)
chr8 (597-646)||(28463616-28463665)
chr8 (586-647)||(33057588-33057649)
chr8 (590-638)||(7012169-7012217)
chr8 (608-659)||(35564706-35564757)
chr8 (689-723)||(5031462-5031496)
chr8 (665-715)||(13246801-13246851)
chr8 (604-686)||(13246806-13246888)
chr8 (583-617)||(13831485-13831519)
chr8 (693-723)||(22429533-22429563)
chr8 (592-638)||(31654613-31654659)
chr8 (592-638)||(39571287-39571333)
chr8 (585-638)||(54696-54749)
chr8 (603-648)||(15688041-15688086)
chr8 (595-648)||(17006914-17006967)
chr8 (595-648)||(17570280-17570333)
chr8 (693-722)||(24177971-24178000)
chr8 (693-722)||(35011211-35011240)
chr8 (693-722)||(36366144-36366173)
chr8 (689-722)||(40483282-40483315)
[»] chr3 (47 HSPs)
chr3 (18-330)||(1658352-1658663)
chr3 (589-722)||(38964392-38964525)
chr3 (592-722)||(10297979-10298109)
chr3 (592-722)||(19557052-19557182)
chr3 (592-722)||(49823381-49823511)
chr3 (592-722)||(22721931-22722061)
chr3 (592-722)||(34080030-34080160)
chr3 (592-722)||(48340397-48340527)
chr3 (587-722)||(8817381-8817516)
chr3 (591-722)||(21295325-21295456)
chr3 (592-722)||(2787832-2787962)
chr3 (592-722)||(4238594-4238724)
chr3 (592-722)||(8437425-8437555)
chr3 (592-722)||(17653712-17653842)
chr3 (592-722)||(37508921-37509051)
chr3 (592-722)||(40690996-40691126)
chr3 (592-722)||(44785396-44785526)
chr3 (592-722)||(51406673-51406803)
chr3 (595-722)||(9111497-9111624)
chr3 (595-722)||(42507358-42507485)
chr3 (592-722)||(36095680-36095810)
chr3 (588-722)||(42170342-42170476)
chr3 (592-722)||(46208030-46208160)
chr3 (586-723)||(35513472-35513609)
chr3 (586-717)||(6013330-6013461)
chr3 (132-218)||(13851901-13851987)
chr3 (604-715)||(33942944-33943055)
chr3 (8-80)||(13851834-13851906)
chr3 (245-315)||(13852035-13852106)
chr3 (628-715)||(8092595-8092682)
chr3 (592-722)||(9213516-9213646)
chr3 (592-657)||(34988140-34988205)
chr3 (637-710)||(43323072-43323145)
chr3 (592-674)||(5323254-5323337)
chr3 (592-647)||(9027142-9027197)
chr3 (592-651)||(45652069-45652128)
chr3 (592-725)||(9213516-9213649)
chr3 (592-648)||(2131746-2131802)
chr3 (586-638)||(38964386-38964438)
chr3 (591-638)||(17653711-17653758)
chr3 (592-659)||(47188936-47189003)
chr3 (592-646)||(33128206-33128260)
chr3 (592-638)||(37508921-37508967)
chr3 (592-638)||(46208030-46208076)
chr3 (585-638)||(4238587-4238640)
chr3 (603-648)||(8092599-8092644)
chr3 (589-638)||(10297976-10298025)
[»] chr6 (30 HSPs)
chr6 (18-330)||(14666843-14667156)
chr6 (17-295)||(17715839-17716102)
chr6 (592-722)||(8099530-8099660)
chr6 (592-723)||(26602322-26602453)
chr6 (592-722)||(2830335-2830465)
chr6 (592-722)||(6068566-6068696)
chr6 (592-722)||(6330115-6330245)
chr6 (592-722)||(8382969-8383099)
chr6 (592-722)||(11572145-11572275)
chr6 (592-722)||(13853593-13853723)
chr6 (592-722)||(35031001-35031131)
chr6 (583-722)||(6143554-6143693)
chr6 (592-723)||(9644695-9644826)
chr6 (592-723)||(9650712-9650843)
chr6 (592-722)||(33052794-33052924)
chr6 (592-722)||(8417793-8417923)
chr6 (592-706)||(28747134-28747248)
chr6 (132-220)||(11947095-11947183)
chr6 (630-723)||(13043757-13043850)
chr6 (592-680)||(17992030-17992118)
chr6 (23-80)||(11947178-11947235)
chr6 (592-671)||(22896513-22896592)
chr6 (245-315)||(11946925-11946996)
chr6 (590-661)||(7596975-7597046)
chr6 (591-648)||(8186441-8186498)
chr6 (592-666)||(3788093-3788167)
chr6 (628-714)||(6068976-6069062)
chr6 (607-703)||(6549902-6549997)
chr6 (628-717)||(14936493-14936582)
chr6 (269-315)||(14415845-14415892)
[»] chr5 (31 HSPs)
chr5 (18-283)||(24046729-24046994)
chr5 (584-723)||(9395349-9395488)
chr5 (592-726)||(11795164-11795298)
chr5 (592-722)||(36563538-36563668)
chr5 (592-722)||(37148955-37149085)
chr5 (592-722)||(41989407-41989537)
chr5 (585-722)||(13103024-13103161)
chr5 (592-722)||(23359942-23360072)
chr5 (585-722)||(13033051-13033188)
chr5 (592-722)||(17025624-17025754)
chr5 (592-722)||(20848074-20848203)
chr5 (592-722)||(26350350-26350480)
chr5 (592-722)||(37641953-37642084)
chr5 (595-722)||(4443960-4444087)
chr5 (592-695)||(21575973-21576076)
chr5 (612-722)||(582989-583099)
chr5 (592-701)||(6126845-6126954)
chr5 (596-713)||(966157-966274)
chr5 (644-722)||(38361743-38361821)
chr5 (605-723)||(39290774-39290891)
chr5 (606-673)||(2366352-2366419)
chr5 (604-659)||(9006894-9006949)
chr5 (603-717)||(966159-966273)
chr5 (628-722)||(2629580-2629674)
chr5 (598-708)||(3549553-3549663)
chr5 (588-638)||(26350434-26350484)
chr5 (693-726)||(11931964-11931997)
chr5 (693-722)||(15968310-15968339)
chr5 (693-722)||(22731378-22731407)
chr5 (676-725)||(23360026-23360075)
chr5 (585-638)||(37149039-37149092)
[»] chr4 (46 HSPs)
chr4 (589-723)||(6121890-6122024)
chr4 (590-722)||(47833611-47833743)
chr4 (585-722)||(48336263-48336400)
chr4 (592-729)||(53337363-53337500)
chr4 (586-722)||(51894576-51894712)
chr4 (592-722)||(3372121-3372251)
chr4 (592-722)||(20538686-20538816)
chr4 (590-722)||(46797725-46797857)
chr4 (592-723)||(24704369-24704500)
chr4 (592-722)||(3992976-3993106)
chr4 (592-722)||(7579310-7579440)
chr4 (592-722)||(42797732-42797862)
chr4 (593-722)||(40913190-40913319)
chr4 (586-722)||(47838611-47838747)
chr4 (592-722)||(3904683-3904813)
chr4 (592-723)||(52756674-52756805)
chr4 (592-722)||(33621796-33621926)
chr4 (592-722)||(43900549-43900679)
chr4 (592-723)||(5986875-5987006)
chr4 (592-722)||(41469766-41469896)
chr4 (587-710)||(3422073-3422195)
chr4 (611-722)||(33551201-33551312)
chr4 (611-722)||(26231577-26231688)
chr4 (591-710)||(41615675-41615794)
chr4 (592-716)||(17344219-17344343)
chr4 (605-707)||(50430431-50430533)
chr4 (592-717)||(4780301-4780425)
chr4 (592-711)||(29845656-29845769)
chr4 (628-707)||(31013036-31013115)
chr4 (631-722)||(25855083-25855174)
chr4 (592-646)||(17236864-17236918)
chr4 (592-638)||(40913273-40913319)
chr4 (594-659)||(13601063-13601128)
chr4 (604-661)||(45478153-45478210)
chr4 (650-716)||(17236845-17236912)
chr4 (591-648)||(1716300-1716357)
chr4 (668-722)||(4780371-4780425)
chr4 (592-638)||(6121977-6122023)
chr4 (592-638)||(43900549-43900595)
chr4 (693-722)||(20459360-20459389)
chr4 (592-657)||(38160372-38160437)
chr4 (676-717)||(40913194-40913235)
chr4 (693-722)||(42804255-42804284)
chr4 (592-648)||(44900080-44900136)
chr4 (693-722)||(47866035-47866064)
chr4 (693-722)||(55190786-55190815)
[»] chr1 (38 HSPs)
chr1 (592-722)||(26471065-26471195)
chr1 (591-722)||(27159357-27159488)
chr1 (591-722)||(44668092-44668223)
chr1 (592-722)||(31842795-31842925)
chr1 (592-722)||(39401966-39402096)
chr1 (586-722)||(9981647-9981783)
chr1 (592-723)||(47216699-47216830)
chr1 (592-722)||(11795933-11796063)
chr1 (592-722)||(14984837-14984967)
chr1 (598-723)||(44955212-44955337)
chr1 (592-723)||(1050887-1051018)
chr1 (592-710)||(25694331-25694449)
chr1 (592-722)||(34042696-34042826)
chr1 (592-722)||(47777481-47777611)
chr1 (592-722)||(12483628-12483758)
chr1 (612-722)||(23278021-23278131)
chr1 (607-722)||(47588352-47588467)
chr1 (586-716)||(47969700-47969831)
chr1 (592-722)||(17556752-17556883)
chr1 (592-722)||(11897054-11897184)
chr1 (592-722)||(16448108-16448238)
chr1 (592-722)||(37552141-37552271)
chr1 (603-722)||(12213485-12213604)
chr1 (592-648)||(16448182-16448238)
chr1 (592-707)||(11989796-11989911)
chr1 (603-714)||(12062568-12062678)
chr1 (603-712)||(12062571-12062679)
chr1 (592-648)||(11897054-11897110)
chr1 (603-710)||(12043616-12043722)
chr1 (607-673)||(571556-571622)
chr1 (604-673)||(1598394-1598461)
chr1 (689-722)||(47678371-47678404)
chr1 (606-673)||(12047155-12047223)
chr1 (668-715)||(12043679-12043726)
chr1 (592-646)||(12213550-12213604)
chr1 (689-719)||(47844536-47844566)
chr1 (693-722)||(43929465-43929494)
chr1 (689-722)||(49944832-49944865)
[»] chr7 (32 HSPs)
chr7 (586-722)||(7240749-7240885)
chr7 (592-722)||(1738447-1738577)
chr7 (586-732)||(7482215-7482361)
chr7 (592-722)||(28536751-28536881)
chr7 (592-722)||(46840860-46840990)
chr7 (592-723)||(31319399-31319530)
chr7 (592-722)||(9268756-9268886)
chr7 (592-722)||(23314139-23314269)
chr7 (592-722)||(38063913-38064043)
chr7 (582-722)||(94308-94448)
chr7 (592-722)||(1565729-1565859)
chr7 (592-722)||(22285699-22285829)
chr7 (592-722)||(36583395-36583525)
chr7 (588-722)||(38441460-38441594)
chr7 (592-722)||(4790248-4790378)
chr7 (603-722)||(36016207-36016326)
chr7 (132-220)||(9238380-9238468)
chr7 (598-706)||(33418392-33418500)
chr7 (592-722)||(9575409-9575539)
chr7 (603-716)||(40840130-40840243)
chr7 (603-722)||(7269416-7269535)
chr7 (245-307)||(9238235-9238298)
chr7 (18-80)||(9238463-9238523)
chr7 (592-651)||(7661147-7661206)
chr7 (607-657)||(2853686-2853736)
chr7 (594-659)||(9636118-9636183)
chr7 (589-638)||(36016280-36016329)
chr7 (604-657)||(39019840-39019893)
chr7 (592-638)||(22285699-22285745)
chr7 (592-649)||(7269478-7269535)
chr7 (693-722)||(27231953-27231982)
chr7 (585-638)||(36583388-36583441)
[»] chr2 (47 HSPs)
chr2 (586-722)||(13197704-13197840)
chr2 (592-722)||(3055558-3055688)
chr2 (592-722)||(15896842-15896972)
chr2 (592-722)||(37990013-37990143)
chr2 (592-722)||(41478639-41478769)
chr2 (592-722)||(44398686-44398816)
chr2 (585-722)||(16243776-16243913)
chr2 (592-722)||(12337937-12338067)
chr2 (592-722)||(13344484-13344614)
chr2 (592-722)||(38917522-38917652)
chr2 (592-722)||(44397547-44397677)
chr2 (586-723)||(6648513-6648650)
chr2 (591-723)||(16044316-16044448)
chr2 (592-722)||(37666610-37666740)
chr2 (592-722)||(9047755-9047885)
chr2 (592-722)||(15372226-15372356)
chr2 (592-720)||(30099182-30099310)
chr2 (592-711)||(41492896-41493015)
chr2 (611-722)||(4683951-4684062)
chr2 (607-725)||(12170414-12170532)
chr2 (595-694)||(44804581-44804680)
chr2 (595-703)||(16734802-16734910)
chr2 (585-638)||(15372219-15372272)
chr2 (592-722)||(13724102-13724232)
chr2 (586-646)||(23227348-23227408)
chr2 (632-697)||(41453084-41453149)
chr2 (602-659)||(44425028-44425085)
chr2 (607-651)||(15243990-15244034)
chr2 (642-725)||(31150650-31150733)
chr2 (591-657)||(13724101-13724167)
chr2 (592-650)||(30852689-30852747)
chr2 (629-722)||(30852654-30852747)
chr2 (690-727)||(36881527-36881564)
chr2 (693-722)||(45034397-45034426)
chr2 (693-722)||(45571029-45571058)
chr2 (693-722)||(45574696-45574725)
chr2 (693-722)||(45578363-45578392)
chr2 (693-722)||(45582030-45582059)
chr2 (693-722)||(45585697-45585726)
chr2 (693-722)||(45589364-45589393)
chr2 (693-722)||(45593031-45593060)
chr2 (693-722)||(45596698-45596727)
chr2 (693-722)||(45600365-45600394)
chr2 (693-722)||(45604032-45604061)
chr2 (693-722)||(45607699-45607728)
chr2 (693-722)||(45611366-45611395)
chr2 (693-722)||(45615033-45615062)
[»] scaffold0204 (1 HSPs)
scaffold0204 (585-722)||(23785-23922)
[»] scaffold0482 (1 HSPs)
scaffold0482 (592-722)||(12860-12990)
[»] scaffold0009 (1 HSPs)
scaffold0009 (592-722)||(49505-49635)
[»] scaffold0464 (1 HSPs)
scaffold0464 (586-722)||(6125-6261)
[»] scaffold1707 (1 HSPs)
scaffold1707 (604-722)||(1335-1453)
[»] scaffold0011 (2 HSPs)
scaffold0011 (592-722)||(231303-231433)
scaffold0011 (589-648)||(231377-231436)
[»] scaffold0415 (1 HSPs)
scaffold0415 (592-711)||(13731-13845)
[»] scaffold0650 (1 HSPs)
scaffold0650 (628-722)||(21-114)
[»] scaffold0003 (1 HSPs)
scaffold0003 (607-659)||(312781-312833)


Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 353
Target Start/End: Complemental strand, 45349749 - 45349412
Alignment:
Q  18 gaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgttc 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45349749 gaaaccgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgttc 45349650  T
Q  118 aatggatccgcgtctgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtg 217  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45349649 aatggatccgcgactgtgaagctcgattggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtg 45349550  T
Q  218 gagggtgagaaggatgaatgacggtgtgaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgcgacggtgg- 315  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||||||||     
T  45349549 gagggtgagaaggatgaatgacggtgtgaaattcgtcggtgaagtttgacggtggtcgatggtgtgagcgtgacggtggtcgaaggtgtgcgacggtgga 45349450  T
Q  316 aaaagtggttttgctcggtgatggaaggtgtgcttggc 353  Q
    ||||||| || ||| ||||| | ||||||||| |||||    
T  45349449 aaaagtgattctgcacggtggtcgaaggtgtgtttggc 45349412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 24 - 325
Target Start/End: Complemental strand, 17630169 - 17629869
Alignment:
Q  24 gaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgttcaatgga 123  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||||||    
T  17630169 gaagaagaattcgagagtgttacctgtgtgagcgaaaggggaaaaaggatttgtgaaattcgatctgcaactatgaaataggatgatgaagttcaatgga 17630070  T
Q  124 tccgcgtctgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagtt---ccgtgagaagctcgacggcatgagaatgcgtgacggtggag 220  Q
    |||||| |||||||||| |||||||||||||||||||| |||| ||||||||||||   | |||||||||| ||||| |||||||||     ||||||||    
T  17630069 tccgcgactgtgaagcttgatcggtgaagtgtgaagcttgacgttgagattcagttagacggtgagaagctggacggaatgagaatg-----cggtggag 17629975  T
Q  221 ggtgagaaggatgaatgacggtgtgaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaagg-tgtgcgacggtggaaa 318  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||||||| ||||| ||  |||||||||||||||    
T  17629974 ggtgagaaggatgaataacggtgtgaaattcgtcggtgaagctcga-cgtggtcgagggtgtgagcgtgacggtggtcgagggaagtgcgacggtggaaa 17629876  T
Q  319 agtggtt 325  Q
    || ||||    
T  17629875 agcggtt 17629869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 592 - 723
Target Start/End: Original strand, 39571203 - 39571334
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  39571203 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 39571302  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  39571303 atttctcttataaataggaccggaggtagtaa 39571334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 15888352 - 15888482
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15888352 tactccctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 15888451  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  15888452 atttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 590 - 723
Target Start/End: Complemental strand, 6552787 - 6552654
Alignment:
Q  590 agtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatct 689  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  6552787 agtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 6552688  T
Q  690 aaatttttcttataaataggaccggaggtagtaa 723  Q
    |||||| |||||||||||||||||||||||||||    
T  6552687 aaatttctcttataaataggaccggaggtagtaa 6552654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 590 - 722
Target Start/End: Original strand, 33289259 - 33289391
Alignment:
Q  590 agtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatct 689  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  33289259 agtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatct 33289358  T
Q  690 aaatttttcttataaataggaccggaggtagta 722  Q
    |||||| ||||||||||||||||||||||||||    
T  33289359 aaatttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 54612 - 54742
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  54612 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 54711  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  54712 atttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 2890162 - 2890292
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  2890162 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2890261  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  2890262 atttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 7012301 - 7012171
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  7012301 tacttcctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaa 7012202  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  7012201 atttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 7785778 - 7785908
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  7785778 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 7785877  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  7785878 atttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 3304278 - 3304408
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  3304278 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3304377  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  3304378 atttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 7805699 - 7805829
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  7805699 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 7805798  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  7805799 atttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 43199354 - 43199484
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  43199354 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 43199453  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  43199454 atttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 44498187 - 44498317
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  44498187 tactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44498286  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  44498287 atttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 12763654 - 12763784
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  12763654 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 12763753  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||| ||||||||||||||    
T  12763754 atttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 25601000 - 25601130
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  25601000 tactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 25601099  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||| |||||||||||    
T  25601100 atttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 32114475 - 32114605
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  32114475 tactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 32114574  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  32114575 atttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 32211363 - 32211493
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||    
T  32211363 tactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 32211462  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  32211463 atttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 598 - 723
Target Start/End: Original strand, 12343146 - 12343271
Alignment:
Q  598 ctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaattttt 697  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| |    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  698 cttataaataggaccggaggtagtaa 723  Q
    ||||||||||||||||||||||||||    
T  12343246 cttataaataggaccggaggtagtaa 12343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 31654743 - 31654613
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  31654743 tacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31654644  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||| ||||    
T  31654643 atttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 13578987 - 13578857
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||  |||| ||||    
T  13578987 tactccatccagtcatatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaa 13578888  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||| || ||||||||||    
T  13578887 atttctcttataaatagaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 28245106 - 28245018
Alignment:
Q  132 tgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtggag 220  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28245106 tgtgaagctcgatcagtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggaatgagaatgcgtgacggtggag 28245018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 415 - 519
Target Start/End: Complemental strand, 45349337 - 45349233
Alignment:
Q  415 gtgatattattttattttaacataacggatggttggtaactcaccttttggattaacacaactcaccttttgtatttcaattaaaaagctatttaatgtt 514  Q
    ||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| ||| | ||||    
T  45349337 gtgattttactttattttaacataatggattgttggtaactcaccttttggattaacgcaacacaccttttgtatttcaatttaaaagccattcagtgtt 45349238  T
Q  515 tattt 519  Q
    |||||    
T  45349237 tattt 45349233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 8587300 - 8587170
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| ||| ||||||||||||||  |||  |||| ||||||||||||||||||||||||||| | || ||||||||  ||||| ||||| | ||    
T  8587300 tacttcctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaa 8587201  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
     ||| ||||||||||||||||||||| ||||    
T  8587200 ctttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 28245163 - 28245101
Alignment:
Q  18 gaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 80  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28245163 gaaaccgaagaagaattcgagagttttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 28245101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 585 - 673
Target Start/End: Complemental strand, 27422327 - 27422239
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacat 673  Q
    |||||| |||||||| | |||||||||||||||||| ||||| ||||||||| |  |||||||| |||||||||||| |||||||||||    
T  27422327 taaataatactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 718 - 778
Target Start/End: Complemental strand, 45349164 - 45349104
Alignment:
Q  718 tagtaaaacttttaaggatattactagttaaatgttagtaaaagttataaatgtagtagtg 778  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  45349164 tagtaacacttttatggatattactagttaaatgttagtaaaggttataaatgtagtagtg 45349104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 663 - 722
Target Start/End: Original strand, 4245652 - 4245711
Alignment:
Q  663 tccaaatacattcactttagttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  4245652 tccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 592 - 719
Target Start/End: Complemental strand, 28463741 - 28463614
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||||||  ||||||||||   ||||| |||| ||| | ||||||||| ||||| ||| |||||||| |||||||||||  ||||| ||||| | ||    
T  28463741 tactccctccgatcctatttattgcagaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaa 28463642  T
Q  692 atttttcttataaataggaccggaggta 719  Q
     ||| |||||||||||||||||||||||    
T  28463641 ctttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 710
Target Start/End: Original strand, 24691990 - 24692096
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    ||||||||| ||| |||| ||||| ||||||||||||||| ||||| ||| |||||||| | || ||||||  ||||| ||||| |||| ||||||||||    
T  24691990 gtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggtt-aaaattcagttcagatacatcaacttttgttgacctaactttttcttat 24692088  T
Q  703 aaatagga 710  Q
    ||||||||    
T  24692089 aaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 584 - 646
Target Start/End: Original strand, 8587162 - 8587224
Alignment:
Q  584 ttaaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtat 646  Q
    |||||||||||||||||| ||||||||||||||||||  || | |||||||||||||||||||    
T  8587162 ttaaatagtactccctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtat 8587224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 28244951 - 28244881
Alignment:
Q  246 aaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgcgacggtgg 315  Q
    |||||||||||||||||||||  ||||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  28244951 aaattcgtcggtgaagcttgatggtggttgatggtgtgagcgtgtcggtggtcgaaggtgtgcgatggtgg 28244881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 33057724 - 33057594
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||| ||| ||| ||||||||||||||  || | ||||||||| ||||||||||| ||||||| |||| |||  |||||   | ||| ||||||| ||    
T  33057724 tactccatccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaa 33057625  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
     ||| ||||||||||||||||||||| ||||    
T  33057624 ctttgtcttataaataggaccggagggagta 33057594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 717
Target Start/End: Complemental strand, 17007026 - 17006916
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaat 706  Q
    |||||||||||||| |||   |||| ||||||||||||||||  |||| |||||| |||| || |||  ||||| ||||| | || ||| ||||||||||    
T  17007026 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17006927  T
Q  707 aggaccggagg 717  Q
    |||| ||||||    
T  17006926 aggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 717
Target Start/End: Original strand, 17570221 - 17570331
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaat 706  Q
    |||||||||||||| |||   |||| ||||||||||||||||  |||| |||||| |||| || |||  ||||| ||||| | || ||| ||||||||||    
T  17570221 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17570320  T
Q  707 aggaccggagg 717  Q
    |||| ||||||    
T  17570321 aggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 689 - 722
Target Start/End: Complemental strand, 6899452 - 6899419
Alignment:
Q  689 taaatttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagta 6899419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 646
Target Start/End: Original strand, 28463616 - 28463665
Alignment:
Q  597 cctccagtcctatttataagagaattttggatcaacaaaagttgatgtat 646  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||    
T  28463616 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtat 28463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 586 - 647
Target Start/End: Original strand, 33057588 - 33057649
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatc 647  Q
    ||||| |||||||||| ||||||||||||||| ||  |||||||||||||| ||| ||||||    
T  33057588 aaataatactccctccggtcctatttataagacaaagttggatcaacaaaaattgttgtatc 33057649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 7012169 - 7012217
Alignment:
Q  590 agtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||| ||||| |||||||||||||||||| ||| |||||||||||||    
T  7012169 agtactacctccggtcctatttataagagaaatttagatcaacaaaagt 7012217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 659
Target Start/End: Original strand, 35564706 - 35564757
Alignment:
Q  608 atttataagagaattttggatcaacaaaagttgatgtatctagttaaaaatt 659  Q
    |||||||||||| |||||  ||||||||| ||||||||||||||| ||||||    
T  35564706 atttataagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 723
Target Start/End: Complemental strand, 5031496 - 5031462
Alignment:
Q  689 taaatttttcttataaataggaccggaggtagtaa 723  Q
    ||||||||||||||||||||||||||||| |||||    
T  5031496 taaatttttcttataaataggaccggaggaagtaa 5031462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 715
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  665 caaatacattcactttagttgatctaaatttttcttataaataggaccgga 715  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 604 - 686
Target Start/End: Original strand, 13246806 - 13246888
Alignment:
Q  604 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttga 686  Q
    ||||||||||||||||| ||||||||||||||| |  |||||| |   |||||||||| |||| ||||||  ||||| |||||    
T  13246806 tcctatttataagagaaatttggatcaacaaaaatgaatgtatttgactaaaaattcagtccagatacatgaacttttgttga 13246888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 617
Target Start/End: Complemental strand, 13831519 - 13831485
Alignment:
Q  583 gttaaatagtactccctccagtcctatttataaga 617  Q
    |||| ||||||||||||||||||||||||||||||    
T  13831519 gttacatagtactccctccagtcctatttataaga 13831485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 693 - 723
Target Start/End: Complemental strand, 22429563 - 22429533
Alignment:
Q  693 tttttcttataaataggaccggaggtagtaa 723  Q
    |||||||||||||||||||||||||||||||    
T  22429563 tttttcttataaataggaccggaggtagtaa 22429533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 638
Target Start/End: Original strand, 31654613 - 31654659
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 31654659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 638
Target Start/End: Complemental strand, 39571333 - 39571287
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||| ||||| |||||||||||||||||| ||| |||||||||||||    
T  39571333 tactacctccggtcctatttataagagaaatttagatcaacaaaagt 39571287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 638
Target Start/End: Complemental strand, 54749 - 54696
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||| |||| ||||| |||||||||||||||||| ||| | |||||||||||    
T  54749 taaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 54696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 648
Target Start/End: Original strand, 15688041 - 15688086
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||||    
T  15688041 gtcctgtttataagagaaagttgggtcaacaaaagttgatgtatct 15688086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 648
Target Start/End: Original strand, 17006914 - 17006967
Alignment:
Q  595 tccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    |||||||  |||||||||||||||||  |||| |||||||||||||||| ||||    
T  17006914 tccctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatct 17006967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 648
Target Start/End: Complemental strand, 17570333 - 17570280
Alignment:
Q  595 tccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    |||||||  |||||||||||||||||  |||| |||||||||||||||| ||||    
T  17570333 tccctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatct 17570280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 24178000 - 24177971
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  24178000 tttttcttataaataggaccggaggtagta 24177971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 35011240 - 35011211
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  35011240 tttttcttataaataggaccggaggtagta 35011211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Original strand, 36366144 - 36366173
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  36366144 tttttcttataaataggaccggaggtagta 36366173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 689 - 722
Target Start/End: Complemental strand, 40483315 - 40483282
Alignment:
Q  689 taaatttttcttataaataggaccggaggtagta 722  Q
    ||||| ||||||||||||||||||||||||||||    
T  40483315 taaatatttcttataaataggaccggaggtagta 40483282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 330
Target Start/End: Original strand, 1658352 - 1658663
Alignment:
Q  18 gaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgttc 117  Q
    |||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1658352 gaaaccgaagaagaattcgag--tgttacctgcttgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgttc 1658449  T
Q  118 aatggatccgcgtctgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtg 217  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  1658450 aatggatccgcgaccgtgaagctcgatcggtgaagtatgaagctcgacggtgagattcagttccgtgagaagctcgacagaatgagaatgcgtgacggtg 1658549  T
Q  218 gagggtgagaaggatgaatgacggtgtgaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgcgacggtgga 316  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1658550 gagggtgagagggatgaatgacggtgtgaaattcgtcggtgaagcttaacggtggtcgatggtgtgagcgtgacggtggtcgaaggtgtgcgacggtgga 1658649  T
Q  317 aaagtggttttgct 330  Q
    ||||||||| ||||    
T  1658650 aaagtggttctgct 1658663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 589 - 722
Target Start/End: Complemental strand, 38964525 - 38964392
Alignment:
Q  589 tagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatc 688  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  38964525 tagtactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatc 38964426  T
Q  689 taaatttttcttataaataggaccggaggtagta 722  Q
    ||||||| ||||||||||||||||||||||||||    
T  38964425 taaatttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 10298109 - 10297979
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  10298109 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 10298010  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  10298009 atttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 19557052 - 19557182
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 19557151  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  19557152 atttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 49823381 - 49823511
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  49823381 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 49823480  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  49823481 atttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 22722061 - 22721931
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  22722061 tactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 22721962  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  22721961 atttctcttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 34080030 - 34080160
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaa 34080129  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  34080130 atttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 48340527 - 48340397
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 48340428  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||| |||||||||||||||||||||    
T  48340427 atttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 587 - 722
Target Start/End: Original strand, 8817381 - 8817516
Alignment:
Q  587 aatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttga 686  Q
    |||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  8817381 aataatactccttccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 8817480  T
Q  687 tctaaatttttcttataaataggaccggaggtagta 722  Q
     |||||||| ||||||||||||||||| ||||||||    
T  8817481 cctaaatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 591 - 722
Target Start/End: Original strand, 21295325 - 21295456
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||    
T  21295325 gtactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgaccta 21295424  T
Q  691 aatttttcttataaataggaccggaggtagta 722  Q
    ||||| ||||||||||||||||||||||||||    
T  21295425 aatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 2787832 - 2787962
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  2787832 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2787931  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||||||||| |||||    
T  2787932 atttctcttataaataggaccggagatagta 2787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 4238724 - 4238594
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  4238724 tactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 4238625  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  4238624 atttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 8437555 - 8437425
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||    
T  8437555 tactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 8437456  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  8437455 atttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 17653842 - 17653712
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  17653842 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 17653743  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||| ||||    
T  17653742 atttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 37509051 - 37508921
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  37509051 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37508952  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||| ||||    
T  37508951 atttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 40690996 - 40691126
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||    
T  40690996 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaa 40691095  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||||||||| |||||    
T  40691096 atttctcttataaataggaccggagttagta 40691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 44785396 - 44785526
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  44785396 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44785495  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  44785496 atttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 51406803 - 51406673
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  51406803 tactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 51406704  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||| ||||||||||||||    
T  51406703 atttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 595 - 722
Target Start/End: Original strand, 9111497 - 9111624
Alignment:
Q  595 tccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatt 694  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||    
T  9111497 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatt 9111596  T
Q  695 tttcttataaataggaccggaggtagta 722  Q
    | ||||||||||||||||| ||||||||    
T  9111597 tctcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 595 - 722
Target Start/End: Original strand, 42507358 - 42507485
Alignment:
Q  595 tccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatt 694  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| |||||||    
T  42507358 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatt 42507457  T
Q  695 tttcttataaataggaccggaggtagta 722  Q
    | | ||||||||||||||||||||||||    
T  42507458 tctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 36095680 - 36095810
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||| |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  36095680 tactcactccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 36095779  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||| ||||    
T  36095780 atttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 588 - 722
Target Start/End: Original strand, 42170342 - 42170476
Alignment:
Q  588 atagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgat 687  Q
    |||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||     
T  42170342 atagtactccatctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgac 42170441  T
Q  688 ctaaatttttcttataaataggaccggaggtagta 722  Q
    |||||||| ||||||||||| ||||||||||||||    
T  42170442 ctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 46208160 - 46208030
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  46208160 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 46208061  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||| ||||    
T  46208060 atttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 586 - 723
Target Start/End: Complemental strand, 35513609 - 35513472
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| ||||||||||  |||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  35513609 aaatactactccctccgatcctatttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 35513510  T
Q  686 atctaaatttttcttataaataggaccggaggtagtaa 723  Q
    | |||||||| ||||||||||||||||| ||| |||||    
T  35513509 acctaaatttctcttataaataggaccgaagggagtaa 35513472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 586 - 717
Target Start/End: Original strand, 6013330 - 6013461
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||  || |||||||||||||||||| |||||||||||||||||| ||||    
T  6013330 aaatattactccctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttg 6013429  T
Q  686 atctaaatttttcttataaataggaccggagg 717  Q
    | |||||||| |||||||||| |||| |||||    
T  6013430 acctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 13851901 - 13851987
Alignment:
Q  132 tgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtgg 218  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  13851901 tgtgaagctcgatcggtgaagtgtgaagctcggcggtgagattcagttccgtgagaagctcgacggaatgataatgcgtgatggtgg 13851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 604 - 715
Target Start/End: Original strand, 33942944 - 33943055
Alignment:
Q  604 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttata 703  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||| ||| | |||||    
T  33942944 tcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttata 33943043  T
Q  704 aataggaccgga 715  Q
    ||||||| ||||    
T  33943044 aataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 13851834 - 13851906
Alignment:
Q  8 cgaataatatgaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 80  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13851834 cgaaaaatgtgaaaccgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 13851906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 13852035 - 13852106
Alignment:
Q  245 gaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgcgacggtgg 315  Q
    ||||||||||||||||||||||   |||| |||||||||||||||||||| ||||||| |||||||||||||    
T  13852035 gaaattcgtcggtgaagcttgacgatggttgatggtgtgagcgtgacggtggtcgaagatgtgcgacggtgg 13852106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 8092682 - 8092595
Alignment:
Q  628 tcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccgga 715  Q
    |||||| |||||||||||||| |||||||||| | || | ||||||  ||||||||||||  || ||| |||||||||||||||||||    
T  8092682 tcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 9213646 - 9213516
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||| |||||| ||| | ||||||||| ||||||||| | |||| ||| | | |||| ||||||  ||||| |||||   ||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaa 9213547  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    || | | ||||||||||||||||||| ||||    
T  9213546 atgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 592 - 657
Target Start/End: Complemental strand, 34988205 - 34988140
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaa 657  Q
    |||||||||| ||||||||||||||| |  ||||  ||||||| ||||||||||||||||||||||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaa 34988140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 637 - 710
Target Start/End: Complemental strand, 43323145 - 43323072
Alignment:
Q  637 gttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaatagga 710  Q
    |||||||||| | |||||||||| |||||||||||||  ||||| ||||| | || ||||||||||||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 592 - 674
Target Start/End: Complemental strand, 5323337 - 5323254
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagtt-aaaaattcaatccaaatacatt 674  Q
    ||||||||||  | |||||||||||  || ||||| ||||||||||||||||||| | ||| ||||||||||| ||||||||||    
T  5323337 tactccctccgatactatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacatt 5323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 592 - 647
Target Start/End: Original strand, 9027142 - 9027197
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatc 647  Q
    |||||||||| ||||||||||||||| ||  |||| ||||||||||||||||||||    
T  9027142 tactccctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 592 - 651
Target Start/End: Original strand, 45652069 - 45652128
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagt 651  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||| | ||||||||||||    
T  45652069 tactccctccagtcctatttataagagacatttgagtcaacaaaaatggatgtatctagt 45652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 592 - 725
Target Start/End: Original strand, 9213516 - 9213649
Alignment:
Q  592 tactccctccagtcctatttataagaga-attttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    |||||||||| ||||||||||||| ||| ||||| | ||||||||||||||||||||| |   ||  ||  | ||||||||||  | ||| ||||| |||    
T  9213516 tactccctccggtcctatttataaaagacattttag-tcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgaccta 9213614  T
Q  691 aatttttcttataaataggaccggaggtagtaaaa 725  Q
    ||||| ||| ||||||||||| ||||| |||||||    
T  9213615 aatttctctaataaataggacgggagggagtaaaa 9213649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 592 - 648
Target Start/End: Complemental strand, 2131802 - 2131746
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    |||||||||| |||||| |||| |||||  ||||| |||||||||||||||||||||    
T  2131802 tactccctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatct 2131746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 586 - 638
Target Start/End: Original strand, 38964386 - 38964438
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    ||||| |||| ||||| |||||||||||||||||| ||| |||||||||||||    
T  38964386 aaataatactacctccggtcctatttataagagaaatttagatcaacaaaagt 38964438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 638
Target Start/End: Original strand, 17653711 - 17653758
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    ||||||||||| |||||||||||||||||| ||| | |||||||||||    
T  17653711 gtactccctccggtcctatttataagagaaatttaggtcaacaaaagt 17653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 659
Target Start/End: Complemental strand, 47189003 - 47188936
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaatt 659  Q
    ||||||||||  || ||||||||| ||||| ||||||||||||||||| || || |||||| ||||||    
T  47189003 tactccctccgatcatatttataaaagaatgttggatcaacaaaagttaatttacctagttcaaaatt 47188936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 646
Target Start/End: Original strand, 33128206 - 33128260
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtat 646  Q
    ||||| ||||||||||| ||||||||||| ||| | |||||||||||| ||||||    
T  33128206 tactctctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtat 33128260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 638
Target Start/End: Original strand, 37508921 - 37508967
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 37508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 638
Target Start/End: Original strand, 46208030 - 46208076
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  46208030 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 46208076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 638
Target Start/End: Original strand, 4238587 - 4238640
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||| |||| ||||| |||||||||||||||||| ||| | |||||||||||    
T  4238587 taaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4238640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 648
Target Start/End: Original strand, 8092599 - 8092644
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    ||||||||||||||||||  ||| |||||| |||||||||||||||    
T  8092599 gtcctatttataagagaaaattgaatcaactaaagttgatgtatct 8092644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 638
Target Start/End: Original strand, 10297976 - 10298025
Alignment:
Q  589 tagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    ||||||| ||||| |||||||||||||||||| ||| | |||||||||||    
T  10297976 tagtactacctccggtcctatttataagagaaatttaggtcaacaaaagt 10298025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 330
Target Start/End: Complemental strand, 14667156 - 14666843
Alignment:
Q  18 gaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgttc 117  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  14667156 gaaaccgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatcttcaattgtgaaattggatgatgacgttc 14667057  T
Q  118 aatggatccgcgtctgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtg 217  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  14667056 aatggatccgcgactgtgaagctcgatcgatgacgtgtgaagctcgacggtgagattcagttcggtgagaagctcgacagaatgagaatgcgtgacggtg 14666957  T
Q  218 gagggtgagaaggatgaatgacggtgtgaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgcgacggtgga 316  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||| ||| ||| | |||||||||| |||||    
T  14666956 gagggtgagaaggatgaatgacggtgtgaaattcgtcggtgaaacttgacggtggtcgatggtgtgagcatgatggtggtcaagggtgtgcgacagtgga 14666857  T
Q  317 aaagtggttttgct 330  Q
    ||||||||| ||||    
T  14666856 aaagtggttatgct 14666843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 17716102 - 17715839
Alignment:
Q  17 tgaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgtt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17716102 tgaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaattgtgaaattggatgatgacgtt 17716003  T
Q  117 caatggatccgcgtctgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggt 216  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||               |||||||||||||| ||||||||||||||||||    
T  17716002 caatggatccgcgactgtgaagctcgatcggtgaagtgtgaagctcgacggt---------------gagaagctcgacggaatgagaatgcgtgacggt 17715918  T
Q  217 ggagggtgagaaggatgaatgacggtgtgaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggtg 295  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||||||| ||||||||    
T  17715917 ggagggtgagaaggatgaatgacggtgcgaaattcgtcggtgaaacttgacggtggtcgatggtgtgagcatgacggtg 17715839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 8099660 - 8099530
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  8099660 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 8099561  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  8099560 atttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 592 - 723
Target Start/End: Complemental strand, 26602453 - 26602322
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  26602453 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26602354  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  26602353 atttctcttataaataggaccggaggtagtaa 26602322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 2830465 - 2830335
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2830366  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  2830365 atttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 6068696 - 6068566
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  6068696 tactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaa 6068597  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||||||||||||||||||||||||||||||    
T  6068596 atttttcttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 6330245 - 6330115
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  6330245 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6330146  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  6330145 atttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 8382969 - 8383099
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 8383068  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  8383069 atttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 11572145 - 11572275
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  11572145 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 11572244  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  11572245 atttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 13853593 - 13853723
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  13853593 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 13853692  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||| ||||||||    
T  13853693 atttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 35031001 - 35031131
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  35031001 tacttcctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 35031100  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||||||||||||||||||||||||||||||    
T  35031101 atttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 583 - 722
Target Start/End: Complemental strand, 6143693 - 6143554
Alignment:
Q  583 gttaaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttag 682  Q
    |||||||| |||||| ||| || |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6143693 gttaaatactactccttccggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttg 6143594  T
Q  683 ttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||| |||||||||||||| |||||||||||    
T  6143593 ttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 592 - 723
Target Start/End: Complemental strand, 9644826 - 9644695
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| ||||    
T  9644826 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaa 9644727  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  9644726 atttctcttataaataggaccggaggtagtaa 9644695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 592 - 723
Target Start/End: Complemental strand, 9650843 - 9650712
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| ||||    
T  9650843 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaa 9650744  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  9650743 atttctcttataaataggaccggaggtagtaa 9650712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 33052794 - 33052924
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  33052794 tactccatccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 33052893  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  33052894 atttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 8417793 - 8417923
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 8417892  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||| |||| |||| ||||    
T  8417893 atttctcttataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 592 - 706
Target Start/End: Original strand, 28747134 - 28747248
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  28747134 tactcccttcagtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaa 28747233  T
Q  692 atttttcttataaat 706  Q
    |||| ||||||||||    
T  28747234 atttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 11947183 - 11947095
Alignment:
Q  132 tgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtggag 220  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  11947183 tgtgaagctcgattggtgaagtgtgaagcttgacggtgagattcagttccgtgagaagctcaacggaatgagaatgcgtgacggtggag 11947095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 630 - 723
Target Start/End: Complemental strand, 13043850 - 13043757
Alignment:
Q  630 aacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccggaggtagtaa 723  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||| |||||||||||| ||||||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagtaa 13043757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 592 - 680
Target Start/End: Complemental strand, 17992118 - 17992030
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttt 680  Q
    |||||||| | |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  17992118 tactcccttcggtcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttt 17992030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 11947235 - 11947178
Alignment:
Q  23 cgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11947235 cgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 11947178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 592 - 671
Target Start/End: Complemental strand, 22896592 - 22896513
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatac 671  Q
    ||||||| || ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||    
T  22896592 tactcccgccggtcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac 22896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 11946996 - 11946925
Alignment:
Q  245 gaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgcgacggtgg 315  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  11946996 gaaattcgtcggtgaagcttgacggtggttgatggtgtgagcgtgacggtggtcgaaggtgtgcgacggtgg 11946925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 590 - 661
Target Start/End: Original strand, 7596975 - 7597046
Alignment:
Q  590 agtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattca 661  Q
    ||||||||||||| ||||||||||| ||||| ||||  |||| |||||||||||||| ||||||||||||||    
T  7596975 agtactccctccaatcctatttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattca 7597046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 648
Target Start/End: Complemental strand, 8186498 - 8186441
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    |||||||| || ||||||||||||| |||| |||||||||||||||||||||||||||    
T  8186498 gtactccccccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatct 8186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 592 - 666
Target Start/End: Complemental strand, 3788167 - 3788093
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatcca 666  Q
    |||||||||| ||| ||||||||||| || ||| | ||||||||||||||||||| ||||||| |||||| ||||    
T  3788167 tactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtcca 3788093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 714
Target Start/End: Original strand, 6068976 - 6069062
Alignment:
Q  628 tcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccgg 714  Q
    |||||||||| ||| ||||| ||||||||||| |  ||||||||||| ||||| ||||| |||||| | | ||||||||||||||||    
T  6068976 tcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 703
Target Start/End: Complemental strand, 6549997 - 6549902
Alignment:
Q  607 tatttataagaga-attttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttata 703  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||  ||| ||  || |||||||||| ||||| ||||| |||||||| |||||||    
T  6549997 tatttataagagatattttggtt-aacaaaagttgatgtatctagtccaaattttcat-caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 717
Target Start/End: Original strand, 14936493 - 14936582
Alignment:
Q  628 tcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccggagg 717  Q
    |||||||||| |||||||||||||||| ||||   |||||||||||  ||| | ||||| | |||| | |||||||||||||||| ||||    
T  14936493 tcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 14415845 - 14415892
Alignment:
Q  269 gtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgcgacggtgg 315  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||||    
T  14415845 gtggttgatggtgtgagcgtgacggtggttgaaggtgtgcgacggtgg 14415892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 24046729 - 24046994
Alignment:
Q  18 gaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaaattagatctgcaactgtgaaattggatgatgacgttc 117  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  24046729 gaaaccgaaaaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttatgaaattagatatgcaactgtgaaattggatgatgacgttc 24046828  T
Q  118 aatggatccgcgtctgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtg 217  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  24046829 aatgaatccgcgactgtgaagctcgatcggtgaagtgtgaagctcgatggtgagattcagttcggtgagaagctcgacggaatgagaatgcgtgacggtg 24046928  T
Q  218 gagggtgagaaggatgaatgacggtgtgaaattcgtcggtgaagcttgagagtggtcgatggtgtg 283  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||    
T  24046929 gagggtgagaaggatgaatgacggtgtgaaattcatcggtgaagcttgacggtggtcgagggtgtg 24046994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 584 - 723
Target Start/End: Complemental strand, 9395488 - 9395349
Alignment:
Q  584 ttaaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagt 683  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  9395488 ttaaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgt 9395389  T
Q  684 tgatctaaatttttcttataaataggaccggaggtagtaa 723  Q
    ||| |||||||| |||||||||||||||||||||||||||    
T  9395388 tgacctaaatttctcttataaataggaccggaggtagtaa 9395349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 592 - 726
Target Start/End: Complemental strand, 11795298 - 11795164
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  11795298 tactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 11795199  T
Q  692 atttttcttataaataggaccggaggtagtaaaac 726  Q
    |||| |||||||||||||| |||||||||||||||    
T  11795198 atttctcttataaataggatcggaggtagtaaaac 11795164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 36563538 - 36563668
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  36563538 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 36563637  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||| |||||||||||    
T  36563638 atttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 37148955 - 37149085
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37149054  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  37149055 atttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 41989407 - 41989537
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  41989407 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 41989506  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||| ||||||||||||||||||||    
T  41989507 atttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 585 - 722
Target Start/End: Complemental strand, 13103161 - 13103024
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagtt 684  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||    
T  13103161 taaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgtt 13103062  T
Q  685 gatctaaatttttcttataaataggaccggaggtagta 722  Q
    || |||||||| ||||||||||||||||||||| ||||    
T  13103061 gacctaaatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 23360072 - 23359942
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23359973  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||||| |||||||||    
T  23359972 atttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 585 - 722
Target Start/End: Complemental strand, 13033188 - 13033051
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagtt 684  Q
    |||||| ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||    
T  13033188 taaataatactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgtt 13033089  T
Q  685 gatctaaatttttcttataaataggaccggaggtagta 722  Q
    || |||||||| ||||||||||||||||||||| ||||    
T  13033088 gacctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 17025754 - 17025624
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||| || || ||||    
T  17025754 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaa 17025655  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  17025654 atttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 20848203 - 20848074
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||| ||||    
T  20848203 tactccctccggtcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 20848105  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  20848104 atttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 26350350 - 26350480
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  26350350 tactccctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26350449  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||| |||||| ||||    
T  26350450 atttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 37642084 - 37641953
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcac-tttagttgatcta 690  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||| |||  |||| |||    
T  37642084 tactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgaccta 37641985  T
Q  691 aatttttcttataaataggaccggaggtagta 722  Q
    ||||| ||||||||||||||||||||||||||    
T  37641984 aatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 595 - 722
Target Start/End: Complemental strand, 4444087 - 4443960
Alignment:
Q  595 tccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatt 694  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||| |||||||    
T  4444087 tccctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatt 4443988  T
Q  695 tttcttataaataggaccggaggtagta 722  Q
    | ||||||||||||||||| ||| ||||    
T  4443987 tctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 592 - 695
Target Start/End: Complemental strand, 21576076 - 21575973
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  21576076 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaa 21575977  T
Q  692 attt 695  Q
    ||||    
T  21575976 attt 21575973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 612 - 722
Target Start/End: Complemental strand, 583099 - 582989
Alignment:
Q  612 ataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggac 711  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggac 583000  T
Q  712 cggaggtagta 722  Q
    |||||||||||    
T  582999 cggaggtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 592 - 701
Target Start/End: Complemental strand, 6126954 - 6126845
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaa 6126855  T
Q  692 atttttctta 701  Q
    |||| |||||    
T  6126854 atttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 596 - 713
Target Start/End: Complemental strand, 966274 - 966157
Alignment:
Q  596 ccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaattt 695  Q
    ||||||||||||||||||||||||| ||||||||||||||| |  |||||||| |||||||||||| || | ||||||  ||| | ||||||  || |||    
T  966274 ccctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacatgaactgttgttgattcaacttt 966175  T
Q  696 ttcttataaataggaccg 713  Q
     |||| ||||||||||||    
T  966174 ctcttgtaaataggaccg 966157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 644 - 722
Target Start/End: Original strand, 38361743 - 38361821
Alignment:
Q  644 tatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    |||||| ||||||||||| ||||||||||||||||||  |||| |||||||| |||||||||||||| |||||| ||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagta 38361821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 605 - 723
Target Start/End: Complemental strand, 39290891 - 39290774
Alignment:
Q  605 cctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataa 704  Q
    ||||||||||||||||  | | ||||||||||||| ||||||||| ||||||||| |||||||||||||  | ||| ||||| || |  || |||||| |    
T  39290891 cctatttataagagaaagtcgaatcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-a 39290793  T
Q  705 ataggaccggaggtagtaa 723  Q
    ||||||||||||| |||||    
T  39290792 ataggaccggagggagtaa 39290774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 606 - 673
Target Start/End: Original strand, 2366352 - 2366419
Alignment:
Q  606 ctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacat 673  Q
    ||||||||||||||| ||||| ||||||| |||| |||||| | ||||||| |||| |||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacat 2366419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 604 - 659
Target Start/End: Original strand, 9006894 - 9006949
Alignment:
Q  604 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaatt 659  Q
    |||||||||||| ||| |||| | ||||||||||||||||||||||||| ||||||    
T  9006894 tcctatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 603 - 717
Target Start/End: Original strand, 966159 - 966273
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    |||||||||| |||||||  ||| |||||||| |||| |||||||| |    || ||  | ||| ||||||||| ||| ||||||| |||||| ||||||    
T  966159 gtcctatttacaagagaaagttgaatcaacaacagttcatgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctcttat 966258  T
Q  703 aaataggaccggagg 717  Q
    ||||||||| |||||    
T  966259 aaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 722
Target Start/End: Original strand, 2629580 - 2629674
Alignment:
Q  628 tcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    |||| |||| ||||||||| |||||||||| | |   || ||||||| ||||| ||||| |||||| ||||||||||| | ||||||||| ||||    
T  2629580 tcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagta 2629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 708
Target Start/End: Original strand, 3549553 - 3549663
Alignment:
Q  598 ctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaattttt 697  Q
    |||| |||||||||||||||||| |||  || |||||||||||||||||   |||||||||| |  ||| ||||||| | ||| |||||   |||| | |    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatct 3549652  T
Q  698 cttataaatag 708  Q
    |||||||||||    
T  3549653 cttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 588 - 638
Target Start/End: Complemental strand, 26350484 - 26350434
Alignment:
Q  588 atagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    ||||||||||||||  ||||||||||||||||| ||| | |||||||||||    
T  26350484 atagtactccctccgatcctatttataagagaaatttaggtcaacaaaagt 26350434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 726
Target Start/End: Complemental strand, 11931997 - 11931964
Alignment:
Q  693 tttttcttataaataggaccggaggtagtaaaac 726  Q
    ||||||||||||||||||||||||| ||||||||    
T  11931997 tttttcttataaataggaccggagggagtaaaac 11931964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 15968339 - 15968310
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  15968339 tttttcttataaataggaccggaggtagta 15968310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Original strand, 22731378 - 22731407
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  22731378 tttttcttataaataggaccggaggtagta 22731407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 725
Target Start/End: Original strand, 23360026 - 23360075
Alignment:
Q  676 actttagttgatctaaatttttcttataaataggaccggaggtagtaaaa 725  Q
    ||||| ||||| | ||| || |||||||||||||||||||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagtaaaa 23360075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 638
Target Start/End: Complemental strand, 37149092 - 37149039
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||| |||| ||||| |||||||||||||||||| ||| | |||||||||||    
T  37149092 taaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 37149039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 5e-58; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 589 - 723
Target Start/End: Original strand, 6121890 - 6122024
Alignment:
Q  589 tagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatc 688  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  6121890 tagtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatc 6121989  T
Q  689 taaatttttcttataaataggaccggaggtagtaa 723  Q
    ||||||| |||||||||||||||||||||||||||    
T  6121990 taaatttctcttataaataggaccggaggtagtaa 6122024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 590 - 722
Target Start/End: Complemental strand, 47833743 - 47833611
Alignment:
Q  590 agtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatct 689  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  47833743 agtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 47833644  T
Q  690 aaatttttcttataaataggaccggaggtagta 722  Q
    |||||| ||||||||||||||||||||||||||    
T  47833643 aaatttctcttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 585 - 722
Target Start/End: Complemental strand, 48336400 - 48336263
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagtt 684  Q
    |||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  48336400 taaataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgtt 48336301  T
Q  685 gatctaaatttttcttataaataggaccggaggtagta 722  Q
    || |||||||| ||||||||||||||||||||||||||    
T  48336300 gacctaaatttctcttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 592 - 729
Target Start/End: Complemental strand, 53337500 - 53337363
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  53337500 tactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 53337401  T
Q  692 atttttcttataaataggaccggaggtagtaaaacttt 729  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  53337400 atttctcttataaataggaccggaggtagtaaatcttt 53337363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 586 - 722
Target Start/End: Original strand, 51894576 - 51894712
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||||    
T  51894576 aaatattactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttg 51894675  T
Q  686 atctaaatttttcttataaataggaccggaggtagta 722  Q
    | |||||||||||||||||||||||||||||||||||    
T  51894676 acctaaatttttcttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 3372251 - 3372121
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  3372251 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3372152  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  3372151 atttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 20538686 - 20538816
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 20538785  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  20538786 atttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 590 - 722
Target Start/End: Complemental strand, 46797857 - 46797725
Alignment:
Q  590 agtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatct 689  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||    
T  46797857 agtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 46797758  T
Q  690 aaatttttcttataaataggaccggaggtagta 722  Q
    |||||| |||||||||||| |||||||||||||    
T  46797757 aaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 592 - 723
Target Start/End: Complemental strand, 24704500 - 24704369
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  24704500 tactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 24704401  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  24704400 atttctcttataaataggaccggaggtagtaa 24704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 3993106 - 3992976
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| | ||    
T  3993106 tactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaa 3993007  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  3993006 atttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 7579440 - 7579310
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||    
T  7579440 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaa 7579341  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  7579340 atttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 42797862 - 42797732
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 42797763  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||| ||||||||||||||||||    
T  42797762 atttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 593 - 722
Target Start/End: Original strand, 40913190 - 40913319
Alignment:
Q  593 actccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaa 692  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  40913190 actccctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaa 40913289  T
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||| ||||||||||||||||||||| ||||    
T  40913290 tttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 586 - 722
Target Start/End: Original strand, 47838611 - 47838747
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  47838611 aaataatactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 47838710  T
Q  686 atctaaatttttcttataaataggaccggaggtagta 722  Q
    | | |||||| |||||||||||||| |||||||||||    
T  47838711 accgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 3904683 - 3904813
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||    
T  3904683 tactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 3904782  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| | ||||||||||||||||||||||||    
T  3904783 atttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 592 - 723
Target Start/End: Complemental strand, 52756805 - 52756674
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||| | ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||    
T  52756805 tactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaa 52756706  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||| ||||||    
T  52756705 atttctcttataaataggaccggagatagtaa 52756674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 33621926 - 33621796
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  33621926 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 33621827  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||| |||| | ||||||    
T  33621826 atttctcttataaatagaaccgaaagtagta 33621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 43900679 - 43900549
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaa 43900580  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||| ||||    
T  43900579 atttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 592 - 723
Target Start/End: Complemental strand, 5987006 - 5986875
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||     
T  5987006 tactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctat 5986907  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||| | ||||||||||||    
T  5986906 atttctcttataaatagaatcggaggtagtaa 5986875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 41469766 - 41469896
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  41469766 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 41469865  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| | ||||||||||||||| ||| ||||    
T  41469866 atttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 587 - 710
Target Start/End: Complemental strand, 3422195 - 3422073
Alignment:
Q  587 aatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttga 686  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||    
T  3422195 aataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttga 3422097  T
Q  687 tctaaatttttcttataaatagga 710  Q
     |||||||| ||||||||||||||    
T  3422096 cctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 611 - 722
Target Start/End: Complemental strand, 33551312 - 33551201
Alignment:
Q  611 tataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaatagga 710  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| |||||||| ||||||||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaatagga 33551213  T
Q  711 ccggaggtagta 722  Q
    ||||||||||||    
T  33551212 ccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 611 - 722
Target Start/End: Complemental strand, 26231688 - 26231577
Alignment:
Q  611 tataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaatagga 710  Q
    |||||||||||||| | |  |||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||| |||||||| ||||||||||||||    
T  26231688 tataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaatagga 26231589  T
Q  711 ccggaggtagta 722  Q
    ||||||||||||    
T  26231588 ccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 591 - 710
Target Start/End: Original strand, 41615675 - 41615794
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    ||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||| ||||| |||    
T  41615675 gtactccatccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgaccta 41615774  T
Q  691 aatttttcttataaatagga 710  Q
    | ||| ||||||||||||||    
T  41615775 attttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 592 - 716
Target Start/End: Complemental strand, 17344343 - 17344219
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||||||| || |||||||||||||| ||||||||||||||||||||||||||   ||||||||||| | || ||||||  ||||| |||||| |||    
T  17344343 tactccctccaatcttatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaa 17344244  T
Q  692 atttttcttataaataggaccggag 716  Q
     ||| |||||||||||| |||||||    
T  17344243 ctttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 707
Target Start/End: Original strand, 50430431 - 50430533
Alignment:
Q  605 cctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataa 704  Q
    ||||||||||||| |  ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||  ||||| ||||| | || ||  ||||||||    
T  50430431 cctatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataa 50430530  T
Q  705 ata 707  Q
    |||    
T  50430531 ata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 592 - 717
Target Start/End: Complemental strand, 4780425 - 4780301
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||| ||| | |||||||||||| ||||||||  |||||||||  || |  |||||| ||||||   |||| |||    
T  4780425 tactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaattggat-cggatacatccacttttactgatgtaa 4780327  T
Q  692 atttttcttataaataggaccggagg 717  Q
    || | ||||||||||| |||||||||    
T  4780326 atgtctcttataaataagaccggagg 4780301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 592 - 711
Target Start/End: Complemental strand, 29845769 - 29845656
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagtt-gatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    |||||||||| ||||||||||||||||      ||||||||||||||| ||||||| |||||||||||||| | |||||| ||| | ||| ||||| |||    
T  29845769 tactccctccggtcctatttataagag------ggatcaacaaaagtttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgaccta 29845677  T
Q  691 aatttttcttataaataggac 711  Q
    ||||| |||||||| ||||||    
T  29845676 aatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 707
Target Start/End: Complemental strand, 31013115 - 31013036
Alignment:
Q  628 tcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaata 707  Q
    |||||||||| |||||||||||||||| |||| || ||||||||||  ||||| |||||||||||| | | |||||||||    
T  31013115 tcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 631 - 722
Target Start/End: Complemental strand, 25855174 - 25855083
Alignment:
Q  631 acaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    |||||||| ||||||| | |||||||||||| |||||||||||| ||||| |||||   || ||| ||| |||||||||||| |||| ||||    
T  25855174 acaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 592 - 646
Target Start/End: Complemental strand, 17236918 - 17236864
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtat 646  Q
    ||||| |||| ||||||||||||||| || ||||| |||||||||||||||||||    
T  17236918 tactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 592 - 638
Target Start/End: Complemental strand, 40913319 - 40913273
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||    
T  40913319 tactccctccggtcctatttataagagaaatttagatcaacaaaagt 40913273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 13601063 - 13601128
Alignment:
Q  594 ctccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaatt 659  Q
    |||||||| || |||||||||| ||| |||| |||||||||||||| |||||||| ||| ||||||    
T  13601063 ctccctcctgttctatttataaaagacttttagatcaacaaaagtttatgtatctggtttaaaatt 13601128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 661
Target Start/End: Complemental strand, 45478210 - 45478153
Alignment:
Q  604 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattca 661  Q
    ||||||||||||||||| | ||| |||| |||||||||||||||  ||||||||||||    
T  45478210 tcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattca 45478153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 716
Target Start/End: Original strand, 17236845 - 17236912
Alignment:
Q  650 gttaaaaattcaatccaaa-tacattcactttagttgatctaaatttttcttataaataggaccggag 716  Q
    |||||||||||| || ||| |||||  ||||| ||||| | |||||||||||||||||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 648
Target Start/End: Original strand, 1716300 - 1716357
Alignment:
Q  591 gtactccctccagtcctatttataagaga-attttggatcaacaaaagttgatgtatct 648  Q
    ||||||||||| ||| ||||||||||||| | ||||| |||||||||||||||||||||    
T  1716300 gtactccctccggtcttatttataagagataatttgg-tcaacaaaagttgatgtatct 1716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 668 - 722
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  668 atacattcactttagttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    ||||||| ||||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 638
Target Start/End: Complemental strand, 6122023 - 6121977
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||| ||||| |||||||||||||||||| ||| |||||||||||||    
T  6122023 tactacctccggtcctatttataagagaaatttagatcaacaaaagt 6121977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 638
Target Start/End: Original strand, 43900549 - 43900595
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  43900549 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 43900595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Original strand, 20459360 - 20459389
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  20459360 tttttcttataaataggaccggaggtagta 20459389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 657
Target Start/End: Original strand, 38160372 - 38160437
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaa 657  Q
    ||||| |||||||| |||||||||||||  ||| | ||||||||| |||||||||||  |||||||    
T  38160372 tactctctccagtcatatttataagagagatttaggtcaacaaaaattgatgtatctgattaaaaa 38160437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 717
Target Start/End: Complemental strand, 40913235 - 40913194
Alignment:
Q  676 actttagttgatctaaatttttcttataaataggaccggagg 717  Q
    ||||| ||||||| |||||| |||||||||||||||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 42804284 - 42804255
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  42804284 tttttcttataaataggaccggaggtagta 42804255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 648
Target Start/End: Original strand, 44900080 - 44900136
Alignment:
Q  592 tactccctccagtcctatttataagaga-attttggatcaacaaaagttgatgtatct 648  Q
    |||||||||| ||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  44900080 tactccctccggtcctatttataagagatattctgg-tcaacaaaagttgatatatct 44900136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 47866064 - 47866035
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  47866064 tttttcttataaataggaccggaggtagta 47866035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Original strand, 55190786 - 55190815
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  55190786 tttttcttataaataggaccggaggtagta 55190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 26471065 - 26471195
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26471164  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  26471165 atttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 591 - 722
Target Start/End: Original strand, 27159357 - 27159488
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  27159357 gtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 27159456  T
Q  691 aatttttcttataaataggaccggaggtagta 722  Q
    ||||| ||||||||||||||||||||||||||    
T  27159457 aatttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 591 - 722
Target Start/End: Original strand, 44668092 - 44668223
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  44668092 gtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44668191  T
Q  691 aatttttcttataaataggaccggaggtagta 722  Q
    ||||| ||||||||||||||||||||||||||    
T  44668192 aatttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 31842795 - 31842925
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31842894  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  31842895 atttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 39401966 - 39402096
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 39402065  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  39402066 atttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 586 - 722
Target Start/End: Complemental strand, 9981783 - 9981647
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  9981783 aaataatattccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 9981684  T
Q  686 atctaaatttttcttataaataggaccggaggtagta 722  Q
    | |||||||| ||||||||||||||||||||||||||    
T  9981683 acctaaatttctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 592 - 723
Target Start/End: Original strand, 47216699 - 47216830
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  47216699 tactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 47216798  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  47216799 atttctcttataaataggaccggaggtagtaa 47216830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 11796063 - 11795933
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| ||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaa 11795964  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  11795963 atttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 14984967 - 14984837
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  14984967 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 14984868  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||||||||| |||||    
T  14984867 atttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 598 - 723
Target Start/End: Original strand, 44955212 - 44955337
Alignment:
Q  598 ctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaattttt 697  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  698 cttataaataggaccggaggtagtaa 723  Q
    ||||||||||||||||||||||||||    
T  44955312 cttataaataggaccggaggtagtaa 44955337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 592 - 723
Target Start/End: Complemental strand, 1051018 - 1050887
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| ||||    
T  1051018 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaa 1050919  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  1050918 atttctcttataaataggaccggaggtagtaa 1050887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 710
Target Start/End: Complemental strand, 25694449 - 25694331
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  25694449 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaa 25694350  T
Q  692 atttttcttataaatagga 710  Q
    |||| ||||||||||||||    
T  25694349 atttctcttataaatagga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 34042826 - 34042696
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||    
T  34042826 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 34042727  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  34042726 atttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 47777481 - 47777611
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| ||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaa 47777580  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||||||| |||||||    
T  47777581 atttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 12483628 - 12483758
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||||| ||||    
T  12483628 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaa 12483727  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  12483728 atttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 612 - 722
Target Start/End: Original strand, 23278021 - 23278131
Alignment:
Q  612 ataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggac 711  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| |||||||||||||||    
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 23278120  T
Q  712 cggaggtagta 722  Q
    |||||||||||    
T  23278121 cggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 607 - 722
Target Start/End: Original strand, 47588352 - 47588467
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaat 706  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||||    
T  47588352 tatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 47588451  T
Q  707 aggaccggaggtagta 722  Q
    | |||| |||||||||    
T  47588452 aagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 586 - 716
Target Start/End: Complemental strand, 47969831 - 47969700
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||| ||||    
T  47969831 aaataatactccctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttg 47969732  T
Q  686 atctaaatttttc-ttataaataggaccggag 716  Q
    | |||||||| || ||||||||||||||||||    
T  47969731 acctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 17556883 - 17556752
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaataca-ttcactttagttgatcta 690  Q
    |||||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||| ||||| |||    
T  17556883 tactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgaccta 17556784  T
Q  691 aatttttcttataaataggaccggaggtagta 722  Q
    | ||| |||||||||||||||| |||| ||||    
T  17556783 actttctcttataaataggaccagagggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 11897184 - 11897054
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||| | || ||||||  ||||| ||||| ||||    
T  11897184 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaa 11897085  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
     ||| ||||||||||||||||||||| ||||    
T  11897084 ctttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 16448108 - 16448238
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||| |||| ||| |||||||| | |||| |||| |||||||||||| |||||||| ||| |||||||| |||| ||||||  ||||| ||||| | ||    
T  16448108 tactcactccggtcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaa 16448207  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
     ||| ||||||||||||||||||||| ||||    
T  16448208 ctttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 37552271 - 37552141
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||| || |||||||||||||||||| ||||| ||||||||| |  |||||||| |||||||||||| |||| ||||||  ||| | |||||   ||    
T  37552271 tactccccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaa 37552172  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
     ||| ||||||||||||||||||||| ||||    
T  37552171 ctttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 603 - 722
Target Start/End: Original strand, 12213485 - 12213604
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    ||||||||||| ||||||  |||| ||||||||| ||||| ||| ||||||||||||||||| ||||||||| | ||| ||||| ||||  || ||||||    
T  12213485 gtcctatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttat 12213584  T
Q  703 aaataggaccggaggtagta 722  Q
    ||||| ||| ||||| ||||    
T  12213585 aaataagactggagggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 592 - 648
Target Start/End: Complemental strand, 16448238 - 16448182
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    |||||||||| ||||||||||||||||||  |||| |||||||||||||||||||||    
T  16448238 tactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 592 - 707
Target Start/End: Complemental strand, 11989911 - 11989796
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||| |||| ||||  |||| |||| ||||||||| | |||||||||||| |||||||| |||   ||| ||||| | ||    
T  11989911 tactccctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaa 11989812  T
Q  692 atttttcttataaata 707  Q
     ||| |||||||||||    
T  11989811 ctttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 714
Target Start/End: Complemental strand, 12062678 - 12062568
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    |||||||||||||||||| |||  |||||||||| || ||||||||  ||||||||| ||| || ||||||  ||||| ||||||| |||| | | ||||    
T  12062678 gtcctatttataagagaaatttaaatcaacaaaaattaatgtatctgattaaaaattgaat-cagatacatcaacttttgttgatcaaaatatcttttat 12062580  T
Q  703 aaataggaccgg 714  Q
    ||||||||||||    
T  12062579 aaataggaccgg 12062568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 603 - 712
Target Start/End: Original strand, 12062571 - 12062679
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    ||||||||||||| |||  ||| |||||||||||||||||||||||  || ||  || ||| || ||||||| | ||| |||||| ||||||| ||||||    
T  12062571 gtcctatttataaaagatattttgatcaacaaaagttgatgtatctgattcaatttttaat-cagatacattaatttttgttgatttaaatttctcttat 12062669  T
Q  703 aaataggacc 712  Q
    ||||||||||    
T  12062670 aaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 592 - 648
Target Start/End: Original strand, 11897054 - 11897110
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    |||||||||| ||||||||||||||||||  || | |||||||||||||||||||||    
T  11897054 tactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatct 11897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 710
Target Start/End: Complemental strand, 12043722 - 12043616
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    ||||||||||||||| || |||  |||||||||| || |||||||| |||||||||| ||| |||||||||  ||||| |||||  ||||| | | ||||    
T  12043722 gtcctatttataagaaaaatttaaatcaacaaaaattaatgtatcttgttaaaaattgaat-caaatacatcaacttttgttgacttaaatatcttttat 12043624  T
Q  703 aaatagga 710  Q
    ||||||||    
T  12043623 aaatagga 12043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 673
Target Start/End: Complemental strand, 571622 - 571556
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacat 673  Q
    |||||||| |||||| || |||||||||||||| ||||| |||||| |||||||| || ||||||||    
T  571622 tatttataggagaatatttgatcaacaaaagttaatgtacctagttcaaaattcagtctaaatacat 571556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 673
Target Start/End: Original strand, 1598394 - 1598461
Alignment:
Q  604 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacat 673  Q
    ||||||||||||||||| | ||| ||||||||| ||||||||| | |||||||||||| |||||||||||    
T  1598394 tcctatttataagagaaatatgg-tcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 689 - 722
Target Start/End: Original strand, 47678371 - 47678404
Alignment:
Q  689 taaatttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagta 47678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 606 - 673
Target Start/End: Complemental strand, 12047223 - 12047155
Alignment:
Q  606 ctatttataagagaattttggatcaacaaaagttgatgtatctagtt-aaaaattcaatccaaatacat 673  Q
    ||||||||||||||| |||||||||| |||  |||||||||| |||| ||||||||| || ||||||||    
T  12047223 ctatttataagagaaatttggatcaataaagattgatgtatccagttaaaaaattcagtctaaatacat 12047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 715
Target Start/End: Original strand, 12043679 - 12043726
Alignment:
Q  668 atacattcactttagttgatctaaatttttcttataaataggaccgga 715  Q
    ||||||| | ||| |||||| |||||||||||||||||||||||||||    
T  12043679 atacattaatttttgttgatttaaatttttcttataaataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 646
Target Start/End: Complemental strand, 12213604 - 12213550
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtat 646  Q
    |||||||||||||| ||||||||||||||| || | ||||||||| || ||||||    
T  12213604 tactccctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtat 12213550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 719
Target Start/End: Complemental strand, 47844566 - 47844536
Alignment:
Q  689 taaatttttcttataaataggaccggaggta 719  Q
    |||||||||||||||||||||||||||||||    
T  47844566 taaatttttcttataaataggaccggaggta 47844536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Original strand, 43929465 - 43929494
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  43929465 tttttcttataaataggaccggaggtagta 43929494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 689 - 722
Target Start/End: Complemental strand, 49944865 - 49944832
Alignment:
Q  689 taaatttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||| ||||||    
T  49944865 taaatttttcttataaataggaccggatgtagta 49944832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 586 - 722
Target Start/End: Complemental strand, 7240885 - 7240749
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  7240885 aaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 7240786  T
Q  686 atctaaatttttcttataaataggaccggaggtagta 722  Q
    | |||||||| ||||||||||||||||||||||||||    
T  7240785 acctaaatttctcttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 1738447 - 1738577
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  1738447 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 1738546  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  1738547 atttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 586 - 732
Target Start/End: Complemental strand, 7482361 - 7482215
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  7482361 aaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttg 7482262  T
Q  686 atctaaatttttcttataaataggaccggaggtagtaaaacttttaa 732  Q
    | |||||||| |||||||||||||||||||||||||| || ||||||    
T  7482261 acctaaatttctcttataaataggaccggaggtagtataatttttaa 7482215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 28536751 - 28536881
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  28536751 tactccctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaa 28536850  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  28536851 atttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 46840990 - 46840860
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46840891  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  46840890 atttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 592 - 723
Target Start/End: Original strand, 31319399 - 31319530
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31319498  T
Q  692 atttttcttataaataggaccggaggtagtaa 723  Q
    |||| |||||||||||||||||||||||||||    
T  31319499 atttctcttataaataggaccggaggtagtaa 31319530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 9268886 - 9268756
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  9268886 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 9268787  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||||||| |||||||||    
T  9268786 atttctcttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 23314139 - 23314269
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23314238  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  23314239 atttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 38063913 - 38064043
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  38063913 tactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 38064012  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  38064013 atttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 582 - 722
Target Start/End: Original strand, 94308 - 94448
Alignment:
Q  582 tgttaaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttta 681  Q
    |||||||| |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||     
T  94308 tgttaaattgtactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcactttt 94407  T
Q  682 gttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    ||||| |||||||| |||||||||||||||||||| |||||    
T  94408 gttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 1565729 - 1565859
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  1565729 tactcccttcggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 1565828  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  1565829 atttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 22285829 - 22285699
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 22285730  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||| ||||    
T  22285729 atttctcttataaataggaccggagggagta 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 36583525 - 36583395
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||||    
T  36583525 tactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaa 36583426  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  36583425 atttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 588 - 722
Target Start/End: Complemental strand, 38441594 - 38441460
Alignment:
Q  588 atagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgat 687  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||     
T  38441594 atagtacttcctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgac 38441495  T
Q  688 ctaaatttttcttataaataggaccggaggtagta 722  Q
     ||||||| ||||||||||||||||||||||||||    
T  38441494 ataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 4790378 - 4790248
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||| ||| ||||| ||||    
T  4790378 tacttcctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaa 4790279  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||||||||||||||||||||||||||||||    
T  4790278 atttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 603 - 722
Target Start/End: Original strand, 36016207 - 36016326
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| ||||||    
T  36016207 gtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttat 36016306  T
Q  703 aaataggaccggaggtagta 722  Q
    ||||||||||||||| ||||    
T  36016307 aaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 9238468 - 9238380
Alignment:
Q  132 tgtgaagctcgatcggtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggcatgagaatgcgtgacggtggag 220  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9238468 tgtgaagctctatccgtgaagtgtgaagctcgacggtgagattcagttccgtgagaagctcgacggaatgagaatgcgtgacggtggag 9238380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 598 - 706
Target Start/End: Complemental strand, 33418500 - 33418392
Alignment:
Q  598 ctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaattttt 697  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| |    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 33418401  T
Q  698 cttataaat 706  Q
    |||| ||||    
T  33418400 cttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 9575539 - 9575409
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||| | ||||||||||||||||||  || | ||||||||| |||||||||||||||||||||||| || |||||| || ||||| ||||| | ||    
T  9575539 tactcccttcggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaa 9575440  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
     ||| ||||| |||||||||| |||| ||||    
T  9575439 ctttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 603 - 716
Target Start/End: Original strand, 40840130 - 40840243
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    |||||||||||||||||| |||   ||||||||||||||||||  |||||||||||||| |||||||||||| | ||| ||| |  ||| ||| |||| |    
T  40840130 gtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttct 40840229  T
Q  703 aaataggaccggag 716  Q
    ||||||||||||||    
T  40840230 aaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 722
Target Start/End: Original strand, 7269416 - 7269535
Alignment:
Q  603 gtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttat 702  Q
    ||||||||||||||||||  |||| | |||||||||||||| |||| |||||||||||| |  | ||||||  | ||| ||||| | || ||||||||||    
T  7269416 gtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttat 7269515  T
Q  703 aaataggaccggaggtagta 722  Q
    ||||| ||||||||| ||||    
T  7269516 aaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 9238298 - 9238235
Alignment:
Q  245 gaaattcgtcggtgaagcttgagagtggtcgatggtgtgagcgtgacggt-gtcgaaggtgtgc 307  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||||||    
T  9238298 gaaattcgtcggtgaagcttgacggtggttgatggtgtgagcgtgacggtggtcgaaggtgtgc 9238235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 9238523 - 9238463
Alignment:
Q  18 gaaatcgaagaagaattcgagagtgttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 80  Q
    |||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  9238523 gaaaccgaagaagaattcgag--ttttacctgcgtgagcgaaagaggaaaaaggatttgtgaa 9238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 592 - 651
Target Start/End: Complemental strand, 7661206 - 7661147
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagt 651  Q
    |||||||||  |||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  7661206 tactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagt 7661147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 657
Target Start/End: Original strand, 2853686 - 2853736
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaa 657  Q
    ||||| |||||||| |||||||||||||||||  |||||||||||||||||    
T  2853686 tatttgtaagagaaatttggatcaacaaaagtatatgtatctagttaaaaa 2853736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 9636183 - 9636118
Alignment:
Q  594 ctccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaatt 659  Q
    |||||||| || |||||||||| ||| |||| |||||||||||||| |||||||| ||| ||||||    
T  9636183 ctccctcctgttctatttataaaagacttttagatcaacaaaagtttatgtatctggtttaaaatt 9636118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 638
Target Start/End: Complemental strand, 36016329 - 36016280
Alignment:
Q  589 tagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    ||||||||||||| |||||||||||||||||| ||| | |||||||||||    
T  36016329 tagtactccctccggtcctatttataagagaaatttaggtcaacaaaagt 36016280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 39019840 - 39019893
Alignment:
Q  604 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaa 657  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||| ||||    
T  39019840 tcctatttataagaggcatttggatcaacaaaaattgatgtatctagttcaaaa 39019893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 638
Target Start/End: Original strand, 22285699 - 22285745
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  22285699 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 22285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 649
Target Start/End: Complemental strand, 7269535 - 7269478
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatcta 649  Q
    |||||||||| ||| ||||||||||| ||  |||| ||||||||| ||||||||||||    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatcta 7269478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Original strand, 27231953 - 27231982
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  27231953 tttttcttataaataggaccggaggtagta 27231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 638
Target Start/End: Original strand, 36583388 - 36583441
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||| |||||| ||||| |||||||||||||||||| ||| | |||||||||||    
T  36583388 taaaaagtactacctccggtcctatttataagagaaatttaggtcaacaaaagt 36583441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 586 - 722
Target Start/End: Original strand, 13197704 - 13197840
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  13197704 aaatactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 13197803  T
Q  686 atctaaatttttcttataaataggaccggaggtagta 722  Q
    | |||||||| ||||||||||||||||||||||||||    
T  13197804 acctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 3055688 - 3055558
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  3055688 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3055589  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  3055588 atttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 15896972 - 15896842
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 15896873  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  15896872 atttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 37990013 - 37990143
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  37990013 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37990112  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  37990113 atttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 41478639 - 41478769
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  41478639 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 41478738  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  41478739 atttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 44398816 - 44398686
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  44398816 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44398717  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  44398716 atttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 585 - 722
Target Start/End: Original strand, 16243776 - 16243913
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagtt 684  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  16243776 taaataatactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgtt 16243875  T
Q  685 gatctaaatttttcttataaataggaccggaggtagta 722  Q
    || ||||||||||||||||||||||||||||| |||||    
T  16243876 gacctaaatttttcttataaataggaccggagatagta 16243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 12337937 - 12338067
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 12338036  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||| |||||||||||||    
T  12338037 atttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 13344614 - 13344484
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||    
T  13344614 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 13344515  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| |||||||||||| |||||||||||||    
T  13344514 atttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 38917522 - 38917652
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||    
T  38917522 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 38917621  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  38917622 atttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 44397677 - 44397547
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  44397677 tactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44397578  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  44397577 atttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 586 - 723
Target Start/End: Original strand, 6648513 - 6648650
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||    
T  6648513 aaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttg 6648612  T
Q  686 atctaaatttttcttataaataggaccggaggtagtaa 723  Q
    | |||||||| |||||||||||||||||||||||||||    
T  6648613 acctaaatttctcttataaataggaccggaggtagtaa 6648650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 591 - 723
Target Start/End: Original strand, 16044316 - 16044448
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||    
T  16044316 gtactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 16044415  T
Q  691 aatttttcttataaataggaccggaggtagtaa 723  Q
    ||||| |||||||||||||||||||||||||||    
T  16044416 aatttctcttataaataggaccggaggtagtaa 16044448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 37666610 - 37666740
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||| ||||    
T  37666610 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaa 37666709  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  37666710 atttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 9047755 - 9047885
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||    
T  9047755 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaa 9047854  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||| |||||||| |||||    
T  9047855 atttctcttataaatatgaccggagatagta 9047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 15372356 - 15372226
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaa 15372257  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||| ||||| ||||    
T  15372256 atttctcttataaataggactggagggagta 15372226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 592 - 720
Target Start/End: Original strand, 30099182 - 30099310
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| ||||    
T  30099182 tactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaa 30099281  T
Q  692 atttttcttataaataggaccggaggtag 720  Q
    |||| |||||||||||||| |||||||||    
T  30099282 atttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 592 - 711
Target Start/End: Original strand, 41492896 - 41493015
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||    
T  41492896 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaa 41492995  T
Q  692 atttttcttataaataggac 711  Q
    |||| | |||||||||||||    
T  41492996 atttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 611 - 722
Target Start/End: Original strand, 4683951 - 4684062
Alignment:
Q  611 tataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaatagga 710  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  4683951 tataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 4684050  T
Q  711 ccggaggtagta 722  Q
    ||||||||||||    
T  4684051 ccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 607 - 725
Target Start/End: Original strand, 12170414 - 12170532
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaat 706  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||||  |||| |||| ||| |||| |||||    
T  12170414 tatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaat 12170513  T
Q  707 aggaccggaggtagtaaaa 725  Q
    |||| |||||| |||||||    
T  12170514 aggatcggagggagtaaaa 12170532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 595 - 694
Target Start/End: Original strand, 44804581 - 44804680
Alignment:
Q  595 tccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatt 694  Q
    ||||||| ||||||||||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| |||||||    
T  44804581 tccctccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 595 - 703
Target Start/End: Complemental strand, 16734910 - 16734802
Alignment:
Q  595 tccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatt 694  Q
    ||||||||||||||||||||||||||  |||  | ||||||||||||||||| | |||||||||||| |||| ||||||  ||||| ||||| | || ||    
T  16734910 tccctccagtcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactt 16734811  T
Q  695 tttcttata 703  Q
    | |||||||    
T  16734810 tctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 585 - 638
Target Start/End: Original strand, 15372219 - 15372272
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagt 638  Q
    |||||| ||||||||||||||||||||||||||||| ||| | |||||||||||    
T  15372219 taaataatactccctccagtcctatttataagagaaatttaggtcaacaaaagt 15372272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 13724232 - 13724102
Alignment:
Q  592 tactccctccagtcctatttataagaga-attttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatcta 690  Q
    |||||||| |||||||||||||||| || ||| ||| ||||||||||||||||||||| ||  ||  ||  | ||||||||||  ||||| ||||| |||    
T  13724232 tactccctacagtcctatttataagcgatattctgg-tcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgaccta 13724134  T
Q  691 aatttttcttataaataggaccggaggtagta 722  Q
     || | |||| |||||||||||||||| ||||    
T  13724133 gatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 586 - 646
Target Start/End: Complemental strand, 23227408 - 23227348
Alignment:
Q  586 aaatagtactccctccagtcctatttataagaga-attttggatcaacaaaagttgatgtat 646  Q
    ||||| |||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  23227408 aaataatacttccttcagtcctatttataagagacattttgg-tcaacaaaagttgatgtat 23227348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 697
Target Start/End: Complemental strand, 41453149 - 41453084
Alignment:
Q  632 caaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaattttt 697  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||  |||| |||| |||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaacttttt 41453084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 659
Target Start/End: Complemental strand, 44425085 - 44425028
Alignment:
Q  602 agtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaatt 659  Q
    ||||||||| ||||||||  |||| ||||||||||||| |||||||||||| ||||||    
T  44425085 agtcctattaataagagatatttgaatcaacaaaagtttatgtatctagttcaaaatt 44425028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 651
Target Start/End: Original strand, 15243990 - 15244034
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagt 651  Q
    |||||||||||||  |||| |||||||||||||||||||||||||    
T  15243990 tatttataagagatatttgaatcaacaaaagttgatgtatctagt 15244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 725
Target Start/End: Complemental strand, 31150733 - 31150650
Alignment:
Q  642 tgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccggaggtagtaaaa 725  Q
    |||||||||||||||||| | |||||||||||  ||||| |||||   || ||| |||||||||||||| |||||  |||||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagtaaaa 31150650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 657
Target Start/End: Original strand, 13724101 - 13724167
Alignment:
Q  591 gtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaa 657  Q
    ||||||||||| |||||||||| ||||||  | | | ||||||||||||||||||| | ||||||||    
T  13724101 gtactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaa 13724167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 650
Target Start/End: Complemental strand, 30852747 - 30852689
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctag 650  Q
    |||||||||| ||||||||||||||||||  || ||| || ||||||| ||||||||||    
T  30852747 tactccctccggtcctatttataagagaaagttagattaataaaagtttatgtatctag 30852689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 722
Target Start/End: Original strand, 30852654 - 30852747
Alignment:
Q  629 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttataaataggaccggaggtagta 722  Q
    ||||||||||| ||||||||  || || ||||| || | ||||||  |||||  || |||||| ||| ||||||||||||||||||||| ||||    
T  30852654 caacaaaagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagta 30852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 690 - 727
Target Start/End: Complemental strand, 36881564 - 36881527
Alignment:
Q  690 aaatttttcttataaataggaccggaggtagtaaaact 727  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  36881564 aaatttttcttataaatagaaccggagggagtaaaact 36881527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45034426 - 45034397
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45034426 tttttcttataaataggaccggaggtagta 45034397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45571058 - 45571029
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45571058 tttttcttataaataggaccggaggtagta 45571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45574725 - 45574696
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45574725 tttttcttataaataggaccggaggtagta 45574696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45578392 - 45578363
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45578392 tttttcttataaataggaccggaggtagta 45578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45582059 - 45582030
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45582059 tttttcttataaataggaccggaggtagta 45582030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45585726 - 45585697
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45585726 tttttcttataaataggaccggaggtagta 45585697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45589393 - 45589364
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45589393 tttttcttataaataggaccggaggtagta 45589364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45593060 - 45593031
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45593060 tttttcttataaataggaccggaggtagta 45593031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45596727 - 45596698
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45596727 tttttcttataaataggaccggaggtagta 45596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45600394 - 45600365
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45600394 tttttcttataaataggaccggaggtagta 45600365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45604061 - 45604032
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45604061 tttttcttataaataggaccggaggtagta 45604032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45607728 - 45607699
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45607728 tttttcttataaataggaccggaggtagta 45607699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45611395 - 45611366
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45611395 tttttcttataaataggaccggaggtagta 45611366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 722
Target Start/End: Complemental strand, 45615062 - 45615033
Alignment:
Q  693 tttttcttataaataggaccggaggtagta 722  Q
    ||||||||||||||||||||||||||||||    
T  45615062 tttttcttataaataggaccggaggtagta 45615033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 585 - 722
Target Start/End: Complemental strand, 23922 - 23785
Alignment:
Q  585 taaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagtt 684  Q
    |||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  23922 taaataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgtt 23823  T
Q  685 gatctaaatttttcttataaataggaccggaggtagta 722  Q
    || |||||||| ||||||||||||||||||||||||||    
T  23822 gacctaaatttctcttataaataggaccggaggtagta 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 103; Significance: 8e-51; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 12990 - 12860
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  12990 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 12891  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  12890 atttctcttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 103; Significance: 8e-51; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 49635 - 49505
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 49536  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
    |||| ||||||||||||||||||||||||||    
T  49535 atttctcttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 586 - 722
Target Start/End: Original strand, 6125 - 6261
Alignment:
Q  586 aaatagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttg 685  Q
    ||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  6125 aaataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttg 6224  T
Q  686 atctaaatttttcttataaataggaccggaggtagta 722  Q
    | |||||||| ||||||||||||||||||||||||||    
T  6225 acctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 95; Significance: 5e-46; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 604 - 722
Target Start/End: Complemental strand, 1453 - 1335
Alignment:
Q  604 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttcttata 703  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||    
T  1453 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 1354  T
Q  704 aataggaccggaggtagta 722  Q
    |||||||||||| ||||||    
T  1353 aataggaccggatgtagta 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 592 - 722
Target Start/End: Original strand, 231303 - 231433
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaa 691  Q
    |||||||||| |||||||||||| |||||| || | ||||||||||||||| || |||||| |||||||| |||| ||||||  ||||| ||||||| ||    
T  231303 tactccctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaa 231402  T
Q  692 atttttcttataaataggaccggaggtagta 722  Q
     ||| |||||||| ||||| |||||| ||||    
T  231403 ctttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 589 - 648
Target Start/End: Complemental strand, 231436 - 231377
Alignment:
Q  589 tagtactccctccagtcctatttataagagaattttggatcaacaaaagttgatgtatct 648  Q
    |||||||||||||  ||||| |||||||||||  ||||||||||||||||| ||||||||    
T  231436 tagtactccctccgatcctaattataagagaaagttggatcaacaaaagtttatgtatct 231377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 592 - 711
Target Start/End: Original strand, 13731 - 13845
Alignment:
Q  592 tactccctccagtcctatttataagagaattttggatcaacaaaagtt--gatgtatctagttaaaaattcaatccaaatacattcactttagttgatct 689  Q
    |||||||||| ||||||||||||||||      |||||||||||||||  ||||||| |||||||||||||| | |||||| ||| | ||| ||||| ||    
T  13731 tactccctccggtcctatttataagag------ggatcaacaaaagttttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacct 13823  T
Q  690 aaatttttcttataaataggac 711  Q
    |||||| |||||||| ||||||    
T  13824 aaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 722
Target Start/End: Original strand, 21 - 114
Alignment:
Q  628 tcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttagttgatctaaatttttct-tataaataggaccggaggtagta 722  Q
    ||||||||||||||||||| | |||||||||| | |||||||||||  ||||| ||||| |  ||| ||||| ||||||||| |||||||| ||||    
T  21 tcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgacc--aatctttctctataaatagaaccggagggagta 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 312833 - 312781
Alignment:
Q  607 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaatt 659  Q
    |||||| |||||| |||| ||||||||||| ||||||||||||||| ||||||    
T  312833 tatttaaaagagactttttgatcaacaaaaattgatgtatctagtttaaaatt 312781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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