View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1343_low_82 (Length: 419)

Name: NF1343_low_82
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1343_low_82
NF1343_low_82
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-318)||(434166-434471)
[»] chr8 (80 HSPs)
chr8 (14-267)||(1746448-1746701)
chr8 (14-245)||(17982360-17982591)
chr8 (14-245)||(19948551-19948782)
chr8 (14-267)||(31217942-31218195)
chr8 (14-266)||(34254558-34254810)
chr8 (16-267)||(34256736-34256987)
chr8 (14-245)||(44303561-44303792)
chr8 (14-267)||(43036109-43036361)
chr8 (14-267)||(19945590-19945822)
chr8 (14-267)||(15212472-15212724)
chr8 (14-267)||(30143028-30143280)
chr8 (14-267)||(12702868-12703121)
chr8 (14-267)||(42497900-42498132)
chr8 (14-267)||(4731344-4731596)
chr8 (25-267)||(5702061-5702303)
chr8 (14-209)||(33351893-33352088)
chr8 (14-149)||(27811080-27811216)
chr8 (25-203)||(23799221-23799399)
chr8 (14-146)||(4733610-4733747)
chr8 (248-327)||(17982250-17982329)
chr8 (25-181)||(7412614-7412769)
chr8 (54-267)||(4743463-4743676)
chr8 (156-267)||(11383474-11383584)
chr8 (132-267)||(42435558-42435691)
chr8 (251-326)||(44303454-44303529)
chr8 (248-326)||(1746730-1746808)
chr8 (249-319)||(19948814-19948884)
chr8 (18-113)||(2627581-2627676)
chr8 (25-211)||(3051394-3051581)
chr8 (156-267)||(10014845-10014955)
chr8 (25-149)||(4696306-4696431)
chr8 (156-267)||(27810984-27811094)
chr8 (28-141)||(4456305-4456419)
chr8 (270-326)||(34257019-34257075)
chr8 (149-267)||(22976002-22976119)
chr8 (164-245)||(4283036-4283116)
chr8 (270-319)||(31217860-31217909)
chr8 (36-98)||(1872175-1872237)
chr8 (270-320)||(34254843-34254893)
chr8 (14-87)||(5689136-5689209)
chr8 (270-319)||(19945855-19945904)
chr8 (14-89)||(1292693-1292768)
chr8 (134-267)||(19175314-19175445)
chr8 (156-267)||(40221232-40221342)
chr8 (14-96)||(3303900-3303982)
chr8 (14-88)||(6598836-6598910)
chr8 (14-88)||(6674289-6674363)
chr8 (249-319)||(12703151-12703221)
chr8 (14-87)||(10929666-10929738)
chr8 (14-79)||(40320940-40321005)
chr8 (14-70)||(10015030-10015086)
chr8 (25-150)||(19175448-19175577)
chr8 (156-211)||(4696265-4696320)
chr8 (156-267)||(4733511-4733621)
chr8 (25-96)||(28307836-28307907)
chr8 (14-88)||(41365077-41365151)
chr8 (14-87)||(18141685-18141758)
chr8 (14-87)||(30291457-30291530)
chr8 (230-266)||(2627428-2627464)
chr8 (17-169)||(3439292-3439447)
chr8 (231-266)||(7289537-7289572)
chr8 (25-119)||(19752124-19752217)
chr8 (36-79)||(29796575-29796618)
chr8 (252-291)||(39784361-39784400)
chr8 (14-68)||(1345601-1345655)
chr8 (26-96)||(5990315-5990385)
chr8 (25-87)||(11712244-11712306)
chr8 (36-90)||(32902439-32902493)
chr8 (229-266)||(1261524-1261561)
chr8 (24-77)||(9765622-9765675)
chr8 (229-285)||(31043094-31043148)
chr8 (250-287)||(31043111-31043148)
chr8 (250-286)||(1261620-1261656)
chr8 (251-291)||(4759570-4759610)
chr8 (251-291)||(10683775-10683815)
chr8 (251-291)||(18870057-18870097)
chr8 (17-76)||(25689838-25689898)
chr8 (251-291)||(30656206-30656246)
chr8 (251-291)||(33037323-33037363)
chr8 (251-291)||(36979938-36979978)
[»] chr2 (70 HSPs)
chr2 (14-267)||(45099440-45099693)
chr2 (14-319)||(4503362-4503676)
chr2 (14-245)||(36205893-36206126)
chr2 (14-245)||(5723484-5723715)
chr2 (14-245)||(2334647-2334878)
chr2 (14-267)||(36988305-36988558)
chr2 (14-267)||(6595236-6595477)
chr2 (16-267)||(36318241-36318492)
chr2 (14-265)||(39284585-39284823)
chr2 (51-267)||(2837111-2837326)
chr2 (14-267)||(29867565-29867807)
chr2 (25-267)||(34389125-34389366)
chr2 (14-146)||(38312045-38312178)
chr2 (25-267)||(33528205-33528447)
chr2 (25-267)||(20522496-20522737)
chr2 (25-267)||(21630219-21630460)
chr2 (26-211)||(28258815-28258999)
chr2 (25-211)||(23078109-23078294)
chr2 (25-267)||(33118409-33118650)
chr2 (25-258)||(14698600-14698832)
chr2 (65-211)||(10706890-10707036)
chr2 (14-146)||(17057599-17057732)
chr2 (14-146)||(17085582-17085715)
chr2 (63-267)||(13569640-13569846)
chr2 (248-319)||(36206156-36206227)
chr2 (248-326)||(34389395-34389473)
chr2 (248-329)||(36988587-36988668)
chr2 (248-328)||(2334908-2334988)
chr2 (63-264)||(8389732-8389935)
chr2 (18-113)||(32289411-32289506)
chr2 (25-151)||(36757458-36757585)
chr2 (18-113)||(4484565-4484660)
chr2 (248-326)||(29867457-29867536)
chr2 (18-126)||(30833171-30833279)
chr2 (17-113)||(6266537-6266634)
chr2 (14-87)||(36773414-36773487)
chr2 (14-88)||(11151821-11151895)
chr2 (14-88)||(42362216-42362290)
chr2 (270-327)||(6595509-6595566)
chr2 (14-79)||(33162680-33162745)
chr2 (14-70)||(723974-724030)
chr2 (132-259)||(35447451-35447575)
chr2 (270-326)||(45099351-45099407)
chr2 (110-267)||(39483235-39483392)
chr2 (14-88)||(11690365-11690439)
chr2 (193-267)||(17863878-17863952)
chr2 (14-87)||(11049402-11049474)
chr2 (21-90)||(11067154-11067223)
chr2 (16-84)||(12632949-12633017)
chr2 (275-326)||(5723750-5723801)
chr2 (164-211)||(17865590-17865637)
chr2 (14-88)||(14202637-14202711)
chr2 (25-118)||(17865479-17865571)
chr2 (164-266)||(40015319-40015420)
chr2 (14-79)||(34140001-34140066)
chr2 (14-70)||(14634056-14634112)
chr2 (251-291)||(32247276-32247316)
chr2 (25-77)||(34682102-34682154)
chr2 (250-285)||(40739215-40739250)
chr2 (30-100)||(40015203-40015273)
chr2 (230-267)||(2334767-2334804)
chr2 (229-266)||(25410119-25410156)
chr2 (229-266)||(30833031-30833068)
chr2 (230-266)||(6266384-6266420)
chr2 (251-291)||(9295898-9295938)
chr2 (156-204)||(11690239-11690286)
chr2 (25-77)||(31056319-31056371)
chr2 (251-291)||(39811513-39811553)
chr2 (25-77)||(42269645-42269697)
chr2 (251-291)||(44310507-44310547)
[»] chr1 (76 HSPs)
chr1 (14-267)||(20762357-20762610)
chr1 (14-326)||(13316548-13316869)
chr1 (14-267)||(3206671-3206925)
chr1 (14-267)||(31658924-31659176)
chr1 (14-267)||(49918035-49918287)
chr1 (14-267)||(28220456-28220709)
chr1 (14-267)||(10924909-10925161)
chr1 (14-267)||(28223651-28223904)
chr1 (14-245)||(30476678-30476908)
chr1 (14-267)||(1833207-1833460)
chr1 (16-267)||(44454845-44455096)
chr1 (14-266)||(3156554-3156804)
chr1 (14-267)||(3189036-3189269)
chr1 (14-267)||(3197853-3198086)
chr1 (25-211)||(21536208-21536393)
chr1 (14-150)||(37503784-37503921)
chr1 (63-267)||(3282018-3282222)
chr1 (25-211)||(13598674-13598860)
chr1 (25-211)||(29652087-29652273)
chr1 (25-267)||(37070041-37070283)
chr1 (25-211)||(13604260-13604445)
chr1 (14-128)||(37560099-37560213)
chr1 (156-266)||(11348188-11348297)
chr1 (132-267)||(37033636-37033769)
chr1 (18-113)||(51765234-51765329)
chr1 (132-267)||(193080-193213)
chr1 (248-327)||(3188928-3189007)
chr1 (248-327)||(3197745-3197824)
chr1 (248-327)||(3206563-3206642)
chr1 (21-242)||(46064629-46064849)
chr1 (63-181)||(26644565-26644684)
chr1 (270-331)||(20762263-20762324)
chr1 (17-113)||(40282222-40282320)
chr1 (14-96)||(13138204-13138286)
chr1 (14-87)||(50167418-50167491)
chr1 (14-119)||(197138-197245)
chr1 (17-113)||(21053803-21053901)
chr1 (20-87)||(28265802-28265869)
chr1 (156-267)||(37879481-37879591)
chr1 (25-119)||(47098554-47098648)
chr1 (25-119)||(47102568-47102662)
chr1 (26-211)||(4552879-4553075)
chr1 (17-113)||(9987048-9987145)
chr1 (14-84)||(15820175-15820245)
chr1 (14-87)||(777095-777168)
chr1 (14-88)||(3847351-3847425)
chr1 (14-88)||(8551017-8551091)
chr1 (62-100)||(9022655-9022693)
chr1 (14-88)||(23555495-23555569)
chr1 (156-241)||(29135762-29135846)
chr1 (14-87)||(45644585-45644658)
chr1 (14-70)||(834397-834453)
chr1 (156-267)||(16455332-16455442)
chr1 (25-119)||(32889712-32889806)
chr1 (36-87)||(50169462-50169513)
chr1 (148-245)||(13547671-13547766)
chr1 (148-245)||(13549582-13549677)
chr1 (17-169)||(9036208-9036360)
chr1 (230-266)||(9986895-9986931)
chr1 (17-76)||(20622463-20622523)
chr1 (251-291)||(25439435-25439475)
chr1 (251-291)||(25444628-25444668)
chr1 (251-291)||(39446006-39446046)
chr1 (251-291)||(41391109-41391149)
chr1 (14-69)||(13659566-13659621)
chr1 (169-212)||(15820047-15820090)
chr1 (252-291)||(44023413-44023452)
chr1 (229-266)||(19361022-19361059)
chr1 (229-266)||(19365878-19365915)
chr1 (25-97)||(22819705-22819775)
chr1 (25-77)||(19073204-19073256)
chr1 (25-77)||(19121094-19121146)
chr1 (36-88)||(40122450-40122502)
chr1 (25-77)||(40816585-40816637)
chr1 (253-293)||(43987983-43988023)
chr1 (25-77)||(47703704-47703756)
[»] chr7 (86 HSPs)
chr7 (14-267)||(4178460-4178713)
chr7 (14-245)||(24514990-24515221)
chr7 (14-327)||(35853529-35853853)
chr7 (14-267)||(23554725-23554978)
chr7 (14-245)||(29990761-29990993)
chr7 (14-267)||(47676366-47676618)
chr7 (14-267)||(14070063-14070316)
chr7 (14-267)||(14380091-14380344)
chr7 (14-267)||(18126331-18126582)
chr7 (14-245)||(2761532-2761762)
chr7 (14-267)||(47674173-47674425)
chr7 (14-245)||(1113364-1113595)
chr7 (14-267)||(4585847-4586099)
chr7 (14-150)||(30024962-30025099)
chr7 (25-267)||(49091963-49092207)
chr7 (121-267)||(19495655-19495802)
chr7 (14-263)||(48489120-48489369)
chr7 (14-267)||(26416999-26417254)
chr7 (25-267)||(33332032-33332273)
chr7 (25-266)||(2647280-2647520)
chr7 (25-245)||(46515912-46516128)
chr7 (14-245)||(48491286-48491517)
chr7 (14-266)||(4538770-4539032)
chr7 (25-211)||(21989182-21989367)
chr7 (25-211)||(44847763-44847948)
chr7 (26-211)||(2479611-2479795)
chr7 (14-116)||(43864080-43864182)
chr7 (14-242)||(31733199-31733407)
chr7 (63-267)||(79699-79906)
chr7 (14-117)||(19502013-19502116)
chr7 (16-126)||(25767186-25767296)
chr7 (89-211)||(21983580-21983702)
chr7 (130-267)||(27347610-27347744)
chr7 (14-267)||(6570279-6570532)
chr7 (16-126)||(48408629-48408738)
chr7 (18-113)||(39731215-39731310)
chr7 (63-267)||(4796251-4796455)
chr7 (156-267)||(2389760-2389870)
chr7 (132-267)||(6360479-6360612)
chr7 (248-327)||(23554617-23554696)
chr7 (164-267)||(43863947-43864049)
chr7 (248-326)||(29990653-29990731)
chr7 (132-267)||(32358403-32358536)
chr7 (18-80)||(43504382-43504444)
chr7 (14-87)||(41317677-41317750)
chr7 (25-100)||(3047528-3047603)
chr7 (20-87)||(12098108-12098175)
chr7 (76-118)||(2759071-2759113)
chr7 (14-88)||(38671452-38671526)
chr7 (270-326)||(24515255-24515311)
chr7 (25-119)||(20284363-20284457)
chr7 (17-95)||(24789706-24789784)
chr7 (21-87)||(36146659-36146725)
chr7 (103-211)||(47263995-47264102)
chr7 (130-263)||(496341-496471)
chr7 (36-84)||(4253782-4253830)
chr7 (17-80)||(20343776-20343840)
chr7 (14-86)||(23343840-23343912)
chr7 (25-119)||(2580663-2580757)
chr7 (265-320)||(19495555-19495610)
chr7 (20-87)||(23565297-23565363)
chr7 (21-88)||(24526134-24526201)
chr7 (16-87)||(31105625-31105696)
chr7 (229-266)||(21646496-21646533)
chr7 (229-266)||(25767399-25767436)
chr7 (175-267)||(30026391-30026481)
chr7 (229-285)||(39731140-39731194)
chr7 (14-70)||(496213-496269)
chr7 (270-326)||(4178371-4178427)
chr7 (20-87)||(8153194-8153261)
chr7 (14-77)||(30843476-30843539)
chr7 (21-88)||(31518659-31518726)
chr7 (132-210)||(3050492-3050569)
chr7 (14-88)||(25615727-25615801)
chr7 (14-88)||(41649240-41649313)
chr7 (249-291)||(44847656-44847698)
chr7 (25-78)||(5817040-5817093)
chr7 (14-79)||(36574746-36574811)
chr7 (249-290)||(47264188-47264229)
chr7 (251-291)||(2058528-2058568)
chr7 (251-291)||(4873645-4873685)
chr7 (251-291)||(12406781-12406821)
chr7 (232-264)||(18389201-18389233)
chr7 (232-264)||(18392637-18392669)
chr7 (251-291)||(20357064-20357104)
chr7 (251-291)||(21640347-21640387)
[»] chr5 (79 HSPs)
chr5 (14-245)||(13342768-13342999)
chr5 (14-245)||(25412469-25412700)
chr5 (14-328)||(30182203-30182527)
chr5 (14-327)||(36074274-36074597)
chr5 (14-267)||(42426465-42426717)
chr5 (14-267)||(32636509-32636762)
chr5 (36-267)||(37438831-37439064)
chr5 (14-267)||(13239438-13239690)
chr5 (14-267)||(13487891-13488141)
chr5 (14-267)||(30683150-30683390)
chr5 (14-267)||(42428660-42428900)
chr5 (64-245)||(19806114-19806294)
chr5 (14-245)||(533489-533707)
chr5 (25-211)||(14520504-14520689)
chr5 (14-150)||(28750885-28751023)
chr5 (26-211)||(12083815-12083999)
chr5 (19-205)||(16649857-16650044)
chr5 (25-267)||(11916553-11916795)
chr5 (248-329)||(25412358-25412439)
chr5 (14-97)||(39468779-39468862)
chr5 (132-267)||(5057517-5057650)
chr5 (25-211)||(9352972-9353155)
chr5 (18-113)||(9789451-9789546)
chr5 (18-113)||(16409321-16409416)
chr5 (18-113)||(18441875-18441970)
chr5 (248-327)||(13342658-13342737)
chr5 (130-267)||(16650969-16651104)
chr5 (21-113)||(26170620-26170712)
chr5 (18-113)||(26177729-26177824)
chr5 (26-211)||(36931987-36932170)
chr5 (17-95)||(29720228-29720307)
chr5 (17-113)||(29722370-29722467)
chr5 (248-329)||(13239328-13239409)
chr5 (132-245)||(27015022-27015133)
chr5 (25-117)||(11181564-11181655)
chr5 (25-181)||(15464808-15464963)
chr5 (17-95)||(29751385-29751464)
chr5 (133-267)||(31004735-31004868)
chr5 (156-243)||(535613-535699)
chr5 (188-267)||(38746456-38746534)
chr5 (14-76)||(537901-537963)
chr5 (14-96)||(16451937-16452019)
chr5 (14-88)||(31182837-31182911)
chr5 (14-76)||(42310165-42310227)
chr5 (14-100)||(42926745-42926831)
chr5 (63-119)||(17003688-17003745)
chr5 (248-321)||(30683419-30683492)
chr5 (75-149)||(535685-535760)
chr5 (14-88)||(5887646-5887720)
chr5 (14-79)||(3075888-3075953)
chr5 (164-245)||(39468912-39468992)
chr5 (20-84)||(9049591-9049655)
chr5 (17-126)||(10593091-10593201)
chr5 (251-291)||(15045203-15045243)
chr5 (14-70)||(33831562-33831618)
chr5 (231-266)||(30631804-30631839)
chr5 (25-119)||(31300324-31300418)
chr5 (229-267)||(213030-213068)
chr5 (52-102)||(16407897-16407946)
chr5 (17-78)||(22536512-22536574)
chr5 (253-291)||(31396526-31396564)
chr5 (253-291)||(37556161-37556199)
chr5 (229-266)||(24136337-24136374)
chr5 (253-290)||(31401384-31401421)
chr5 (251-291)||(1456674-1456714)
chr5 (230-266)||(9789663-9789699)
chr5 (25-77)||(10282028-10282080)
chr5 (232-264)||(16544105-16544137)
chr5 (232-264)||(16546327-16546359)
chr5 (230-266)||(18442087-18442123)
chr5 (25-119)||(24553255-24553350)
chr5 (251-291)||(27445490-27445530)
chr5 (251-291)||(27450333-27450373)
chr5 (251-291)||(30631872-30631912)
chr5 (250-286)||(35388057-35388093)
chr5 (132-204)||(38746535-38746606)
chr5 (232-264)||(40379789-40379821)
chr5 (232-264)||(40382000-40382032)
chr5 (160-204)||(42310310-42310354)
[»] chr3 (102 HSPs)
chr3 (14-267)||(5258374-5258627)
chr3 (14-326)||(5260553-5260874)
chr3 (17-267)||(9636360-9636611)
chr3 (14-267)||(45094849-45095103)
chr3 (14-267)||(7761950-7762204)
chr3 (14-267)||(29812749-29813001)
chr3 (14-267)||(7764137-7764406)
chr3 (14-267)||(40734182-40734436)
chr3 (14-267)||(29810554-29810806)
chr3 (14-267)||(5236686-5236939)
chr3 (25-267)||(40592353-40592594)
chr3 (14-211)||(37408200-37408397)
chr3 (25-211)||(48438489-48438675)
chr3 (25-267)||(27026980-27027222)
chr3 (16-181)||(51398585-51398750)
chr3 (25-267)||(47923473-47923716)
chr3 (25-266)||(36029367-36029608)
chr3 (63-267)||(30709366-30709572)
chr3 (25-267)||(8370060-8370301)
chr3 (25-212)||(1735929-1736116)
chr3 (154-267)||(3393292-3393404)
chr3 (25-267)||(16264623-16264864)
chr3 (25-267)||(39032126-39032367)
chr3 (25-211)||(24694792-24694978)
chr3 (36-267)||(44331255-44331471)
chr3 (25-214)||(27974576-27974764)
chr3 (72-267)||(44331735-44331929)
chr3 (132-267)||(4569419-4569552)
chr3 (149-267)||(43402373-43402490)
chr3 (156-267)||(34490700-34490810)
chr3 (251-326)||(9634816-9634891)
chr3 (132-267)||(55302532-55302664)
chr3 (63-267)||(8126941-8127145)
chr3 (133-267)||(43404301-43404433)
chr3 (25-211)||(37725949-37726134)
chr3 (248-327)||(7761842-7761921)
chr3 (16-126)||(23198170-23198280)
chr3 (248-326)||(3393184-3393262)
chr3 (248-326)||(7764030-7764108)
chr3 (16-102)||(23200369-23200454)
chr3 (25-266)||(33386247-33386487)
chr3 (63-211)||(27038362-27038501)
chr3 (132-267)||(31340608-31340743)
chr3 (132-267)||(6096167-6096300)
chr3 (25-210)||(25929023-25929208)
chr3 (132-267)||(40912805-40912938)
chr3 (156-267)||(49200041-49200151)
chr3 (14-88)||(32744656-32744730)
chr3 (130-267)||(40735113-40735250)
chr3 (25-255)||(40844929-40845157)
chr3 (270-326)||(5258660-5258716)
chr3 (18-113)||(7782375-7782470)
chr3 (18-77)||(800973-801032)
chr3 (270-329)||(9636643-9636702)
chr3 (14-81)||(40735254-40735321)
chr3 (132-267)||(54593172-54593305)
chr3 (28-211)||(27453235-27453416)
chr3 (25-211)||(23410571-23410757)
chr3 (63-150)||(35925791-35925880)
chr3 (270-326)||(45094761-45094817)
chr3 (20-88)||(53921739-53921807)
chr3 (14-84)||(2075300-2075369)
chr3 (25-118)||(21711496-21711588)
chr3 (14-88)||(26386711-26386785)
chr3 (149-267)||(46173202-46173318)
chr3 (14-79)||(39153591-39153656)
chr3 (20-88)||(29196637-29196705)
chr3 (17-80)||(54635004-54635068)
chr3 (29-119)||(6794433-6794523)
chr3 (25-146)||(27986147-27986268)
chr3 (188-267)||(36018330-36018408)
chr3 (20-87)||(44700728-44700795)
chr3 (14-88)||(760711-760785)
chr3 (14-88)||(9581147-9581221)
chr3 (14-88)||(19684119-19684193)
chr3 (14-88)||(22835232-22835306)
chr3 (14-87)||(9666698-9666771)
chr3 (17-80)||(6716379-6716443)
chr3 (17-80)||(6718563-6718627)
chr3 (156-211)||(21711606-21711661)
chr3 (156-211)||(27986103-27986158)
chr3 (25-117)||(23392151-23392244)
chr3 (14-70)||(29682241-29682297)
chr3 (14-69)||(16498913-16498968)
chr3 (250-285)||(23198288-23198323)
chr3 (250-285)||(23200487-23200522)
chr3 (250-285)||(32143705-32143740)
chr3 (250-285)||(47303767-47303802)
chr3 (16-78)||(29100431-29100493)
chr3 (25-180)||(32143597-32143750)
chr3 (156-211)||(53921856-53921913)
chr3 (229-285)||(1306343-1306397)
chr3 (250-287)||(1306343-1306380)
chr3 (14-87)||(32890968-32891041)
chr3 (230-266)||(800795-800831)
chr3 (251-291)||(22172698-22172738)
chr3 (253-285)||(24968630-24968662)
chr3 (25-77)||(25796056-25796108)
chr3 (251-291)||(28501188-28501228)
chr3 (251-291)||(28503355-28503395)
chr3 (251-291)||(40372292-40372332)
chr3 (232-264)||(45282677-45282709)
[»] chr6 (66 HSPs)
chr6 (14-245)||(30834766-30834998)
chr6 (14-326)||(5406428-5406749)
chr6 (14-326)||(5410753-5411074)
chr6 (14-245)||(31404903-31405135)
chr6 (40-267)||(5411489-5411716)
chr6 (40-267)||(5407164-5407391)
chr6 (14-212)||(16452559-16452757)
chr6 (14-245)||(33160583-33160815)
chr6 (14-267)||(9183261-9183492)
chr6 (14-167)||(5413622-5413775)
chr6 (103-245)||(16452759-16452901)
chr6 (65-267)||(22964012-22964213)
chr6 (65-267)||(23824180-23824381)
chr6 (25-267)||(31086053-31086297)
chr6 (143-245)||(5413807-5413909)
chr6 (25-211)||(18234357-18234543)
chr6 (14-267)||(33211415-33211666)
chr6 (25-211)||(10076828-10077014)
chr6 (63-267)||(5017076-5017282)
chr6 (229-326)||(5407422-5407517)
chr6 (229-326)||(5411747-5411842)
chr6 (25-211)||(5757116-5757301)
chr6 (248-327)||(33160845-33160924)
chr6 (16-113)||(2171763-2171860)
chr6 (230-331)||(16452934-16453033)
chr6 (25-267)||(31979786-31980032)
chr6 (65-267)||(21272571-21272773)
chr6 (250-327)||(5413941-5414018)
chr6 (159-267)||(603612-603719)
chr6 (132-267)||(21593134-21593267)
chr6 (25-266)||(24435555-24435795)
chr6 (248-319)||(9183521-9183592)
chr6 (18-113)||(411949-412043)
chr6 (16-88)||(26954517-26954589)
chr6 (175-267)||(3809318-3809406)
chr6 (156-267)||(5571846-5571956)
chr6 (17-126)||(6097666-6097776)
chr6 (156-266)||(23896737-23896847)
chr6 (18-76)||(3072987-3073045)
chr6 (156-242)||(26954675-26954760)
chr6 (270-326)||(30835032-30835088)
chr6 (270-326)||(31405168-31405224)
chr6 (25-119)||(31936849-31936943)
chr6 (14-88)||(16567070-16567144)
chr6 (17-112)||(27647709-27647806)
chr6 (14-79)||(16568916-16568981)
chr6 (20-88)||(3039152-3039219)
chr6 (63-118)||(23896663-23896719)
chr6 (135-263)||(26661421-26661547)
chr6 (135-263)||(26767392-26767518)
chr6 (14-88)||(28137638-28137712)
chr6 (63-146)||(5571945-5572029)
chr6 (195-263)||(17759427-17759494)
chr6 (16-76)||(30517894-30517954)
chr6 (36-88)||(30684158-30684210)
chr6 (215-246)||(5413777-5413808)
chr6 (248-285)||(5407420-5407457)
chr6 (248-285)||(5411745-5411782)
chr6 (229-266)||(22709498-22709535)
chr6 (238-291)||(23896867-23896920)
chr6 (252-288)||(6439008-6439044)
chr6 (251-291)||(11857491-11857531)
chr6 (251-291)||(14741962-14742002)
chr6 (251-291)||(22010225-22010265)
chr6 (250-286)||(22709403-22709439)
chr6 (251-291)||(30125054-30125094)
[»] chr4 (94 HSPs)
chr4 (14-267)||(5370316-5370558)
chr4 (14-245)||(52082887-52083118)
chr4 (14-245)||(52093894-52094125)
chr4 (14-267)||(52095592-52095843)
chr4 (14-265)||(34570644-34570894)
chr4 (14-267)||(56178866-56179107)
chr4 (14-267)||(37740312-37740564)
chr4 (14-191)||(30000035-30000212)
chr4 (14-266)||(5429367-5429617)
chr4 (14-245)||(48142760-48142980)
chr4 (25-267)||(36314812-36315053)
chr4 (25-267)||(36329021-36329262)
chr4 (14-267)||(9927687-9927943)
chr4 (25-267)||(54867453-54867694)
chr4 (25-266)||(8689079-8689319)
chr4 (14-245)||(29254202-29254432)
chr4 (14-245)||(54200136-54200366)
chr4 (12-263)||(26175864-26176102)
chr4 (25-267)||(25861614-25861856)
chr4 (14-260)||(12739780-12740014)
chr4 (14-260)||(12747986-12748220)
chr4 (25-267)||(5268781-5269023)
chr4 (25-211)||(16622931-16623116)
chr4 (14-267)||(12745666-12745899)
chr4 (17-266)||(13992519-13992769)
chr4 (63-266)||(6742998-6743201)
chr4 (25-211)||(3777823-3778008)
chr4 (25-267)||(16628453-16628695)
chr4 (25-211)||(5147952-5148137)
chr4 (327-396)||(11784518-11784587)
chr4 (132-267)||(26363733-26363866)
chr4 (156-267)||(46570116-46570226)
chr4 (25-211)||(5143534-5143720)
chr4 (132-267)||(6655424-6655557)
chr4 (14-109)||(36994368-36994462)
chr4 (132-267)||(41639033-41639166)
chr4 (248-327)||(48142651-48142730)
chr4 (25-181)||(10047655-10047806)
chr4 (248-321)||(52095872-52095945)
chr4 (25-211)||(38152075-38152261)
chr4 (132-267)||(27417518-27417651)
chr4 (149-267)||(50674429-50674546)
chr4 (18-113)||(31495544-31495639)
chr4 (63-267)||(35661907-35662098)
chr4 (132-267)||(40630452-40630585)
chr4 (184-329)||(30000873-30001026)
chr4 (25-146)||(5396372-5396494)
chr4 (173-267)||(54882508-54882601)
chr4 (260-321)||(52083160-52083221)
chr4 (260-321)||(52094167-52094228)
chr4 (248-328)||(5048788-5048868)
chr4 (270-329)||(5370591-5370650)
chr4 (20-87)||(37229972-37230039)
chr4 (20-87)||(46147591-46147658)
chr4 (270-321)||(56179139-56179190)
chr4 (14-262)||(24968801-24969049)
chr4 (25-211)||(31985271-31985456)
chr4 (14-84)||(45687426-45687496)
chr4 (156-267)||(5396272-5396383)
chr4 (333-396)||(11788355-11788421)
chr4 (333-396)||(11800522-11800588)
chr4 (188-267)||(2209188-2209266)
chr4 (14-88)||(5871684-5871758)
chr4 (329-391)||(11698332-11698394)
chr4 (14-88)||(13009661-13009735)
chr4 (63-119)||(42599304-42599361)
chr4 (14-86)||(52467585-52467657)
chr4 (229-286)||(28468183-28468237)
chr4 (14-76)||(3909983-3910045)
chr4 (21-87)||(36463639-36463705)
chr4 (130-266)||(3909784-3909917)
chr4 (229-266)||(28468087-28468124)
chr4 (132-253)||(50263265-50263383)
chr4 (14-70)||(47038639-47038695)
chr4 (252-291)||(18856234-18856273)
chr4 (252-291)||(18860446-18860485)
chr4 (25-79)||(37755166-37755220)
chr4 (25-90)||(5112511-5112576)
chr4 (63-96)||(18377664-18377697)
chr4 (164-205)||(39773981-39774022)
chr4 (230-267)||(48142822-48142859)
chr4 (230-267)||(52083007-52083044)
chr4 (230-267)||(52094014-52094051)
chr4 (251-291)||(3814529-3814569)
chr4 (25-77)||(6375950-6376002)
chr4 (251-291)||(9223935-9223975)
chr4 (251-291)||(9228722-9228762)
chr4 (251-291)||(24742501-24742541)
chr4 (230-266)||(31495756-31495792)
chr4 (36-100)||(39774053-39774117)
chr4 (252-288)||(45347356-45347392)
chr4 (25-77)||(51336938-51336990)
chr4 (251-291)||(51520974-51521014)
chr4 (251-291)||(56141547-56141587)
[»] scaffold0016 (2 HSPs)
scaffold0016 (14-267)||(114272-114528)
scaffold0016 (248-326)||(114165-114243)
[»] scaffold0066 (1 HSPs)
scaffold0066 (16-267)||(20647-20897)
[»] scaffold0006 (4 HSPs)
scaffold0006 (68-267)||(2809-3009)
scaffold0006 (25-211)||(5959-6145)
scaffold0006 (25-211)||(132917-133102)
scaffold0006 (14-69)||(149327-149382)
[»] scaffold0087 (2 HSPs)
scaffold0087 (25-211)||(36470-36655)
scaffold0087 (25-211)||(43599-43784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (132-267)||(80850-80983)
[»] scaffold0286 (2 HSPs)
scaffold0286 (16-113)||(22183-22280)
scaffold0286 (132-267)||(11026-11159)
[»] scaffold1519 (2 HSPs)
scaffold1519 (14-86)||(783-855)
scaffold1519 (251-328)||(482-559)
[»] scaffold0036 (1 HSPs)
scaffold0036 (25-163)||(85957-86096)
[»] scaffold0491 (2 HSPs)
scaffold0491 (18-196)||(11396-11573)
scaffold0491 (18-113)||(8970-9065)
[»] scaffold0098 (1 HSPs)
scaffold0098 (26-266)||(45474-45713)
[»] scaffold0176 (2 HSPs)
scaffold0176 (156-263)||(17636-17742)
scaffold0176 (63-149)||(17562-17650)
[»] scaffold0140 (1 HSPs)
scaffold0140 (25-211)||(8055-8240)
[»] scaffold0466 (1 HSPs)
scaffold0466 (132-245)||(6817-6929)
[»] scaffold0510 (2 HSPs)
scaffold0510 (159-266)||(1193-1300)
scaffold0510 (238-291)||(1120-1173)
[»] scaffold0137 (1 HSPs)
scaffold0137 (17-80)||(6154-6217)
[»] scaffold1455 (1 HSPs)
scaffold1455 (252-291)||(1745-1784)
[»] scaffold0464 (1 HSPs)
scaffold0464 (252-291)||(870-909)
[»] scaffold0259 (1 HSPs)
scaffold0259 (253-291)||(1775-1813)
[»] scaffold0084 (1 HSPs)
scaffold0084 (229-267)||(25532-25570)
[»] scaffold0028 (1 HSPs)
scaffold0028 (253-291)||(148480-148518)


Alignment Details
Target: scaffold0002 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 14 - 318
Target Start/End: Complemental strand, 434471 - 434166
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  434471 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttt 434372  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||     
T  434371 tatagcggtcttctgcgtcaaaatcgtgccacgtttttccccaatcgtgccacgatttatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 434272  T
Q  214 ttgcccagcaagcca-aaaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttga 312  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||    
T  434271 ttgcccagcaagccaaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattgccaaatctaatcacgatttctctgcttcccaactttgcaatttga 434172  T
Q  313 agacat 318  Q
    ||||||    
T  434171 agacat 434166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 1746448 - 1746701
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  1746448 agaactctaatcaaggaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttccagctcttcttcaaaatctgcaaagaacactta 1746547  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  1746548 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 1746647  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1746648 ttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 1746701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 17982591 - 17982360
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17982591 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 17982492  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||     
T  17982491 tatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatc 17982392  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||||||||||||||||||||||||||||    
T  17982391 ttgcccagcaagccaaaaatcgtgtcacgatt 17982360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 19948551 - 19948782
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19948551 agaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 19948650  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||     
T  19948651 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatc 19948750  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||| ||||||||||||||||||||||||||||    
T  19948751 ttgtccagcaagccaaaaatcgtgtcacgatt 19948782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 31218195 - 31217942
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31218195 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcttcttcaaaatctacaaagaacactta 31218096  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||||||| |||||     
T  31218095 tatagctgtcttctgcgtcaaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatc 31217996  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  31217995 ttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacaattg 31217942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 14 - 266
Target Start/End: Original strand, 34254558 - 34254810
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34254558 agaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 34254657  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  34254658 tatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatc 34254757  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  34254758 ttgcccagcaatccaaaaatcgtgtcacgatttcccaaaatcgtgtcatgatt 34254810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 34256736 - 34256987
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttata 115  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  34256736 aactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttatctttcttcaagctctccttcaaaatctgcaaagaacacttata 34256835  T
Q  116 tagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatttt 215  Q
    |||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||    
T  34256836 tagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatctt 34256935  T
Q  216 gcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34256936 gctcagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 34256987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 44303792 - 44303561
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44303792 agaactctaatcaaagaccctaaaccctaaagttgtttcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgcaaagaacactta 44303693  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||     
T  44303692 tatagctgtcttctgcgtcgaaatcgtgtcacgattttccccaatcgtgccacaattgatgcgtatgatccaaggtacgaccaaccttatcctggaaatc 44303593  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||||||||||||||||||||||||||||    
T  44303592 ttgcccagcaagccaaaaatcgtgtcacgatt 44303561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 43036361 - 43036109
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  43036361 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctctcattcaaaatctgcaaagaacactta 43036262  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||||||||||||| | |||||||||||||||||     
T  43036261 tataacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaa- 43036164  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||||| |||| | |||||||||||||| ||||||||||||||||||||||||    
T  43036163 cttgcccaacaagtcgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattg 43036109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 19945590 - 19945822
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19945590 agaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttgtctctcttcaagctctccttcaaaatctgcaaagaacactta 19945689  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||||||||||                     ||||||||||||||||||||||||||||||| | ||||||||||||||||||     
T  19945690 tatagctgtcttctgcgtcaaaatcg---------------------tgccacgattgatgcgtacgatccaaggtacgatcaaccttatcctgaaaatc 19945768  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    || |||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  19945769 ttccccaacaagccaaaaatcgtgtcacgatttcctaaaatcgtgtcacgattg 19945822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 15212724 - 15212472
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15212724 agaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcccaagtttctctctcttcaagctctccttcaaaatctgtaaagaacactta 15212625  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || |||| |||||||||||  ||||||  ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||     
T  15212624 tatagcagtcttcagctgtcacaatcgtgtcac-attttcctaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa- 15212527  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  15212526 cttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 15212472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 30143280 - 30143028
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30143280 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctacaaagaacactta 30143181  T
Q  114 tatagttgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| |  ||||||||||||||||| |||| || ||||||| |||| ||| ||||||||| |||| |||| |||||||||||||| ||||     
T  30143180 tatagcagtcttcagttgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatccttaaaa- 30143083  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||| |||||||||| |||||||||||||  ||| ||||||||||||||||||||    
T  30143082 cttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtgtcacgattg 30143028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 12702868 - 12703121
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12702868 agaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatatgcaaagaacactta 12702967  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
     |||    |||||  | ||||||||||||||||||||||||| ||||||| ||||  || ||||||||| |||| |||| ||||||||||||||| |||     
T  12702968 cataacaatcttcaactgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctg-aaag 12703066  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||  |||||||  |||||||||||||| ||| ||||||||||||||||||||    
T  12703067 cttgcttagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 12703121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 42498132 - 42497900
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42498132 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacagtta 42498033  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| ||||| ||||| ||||                     |||||||||||||| || ||||||||| || |||||||||||||||||     
T  42498032 tatagcagtcttcagcgtcgaaatcatgtc---------------------acgattgatgcgtaggacccaaggtacgactaaccttatcctgaaaatc 42497954  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  42497953 ttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacgattg 42497900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 4731596 - 4731344
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||  ||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  4731596 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttttcaagtttctctctcttcaaccgctccttcaaaatctacaaagaacactta 4731497  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||| |||||| ||  |||||||||||||||| |||| || ||||||| |||  ||| ||| ||||  ||||||||| ||||| ||||| |||||||     
T  4731496 tatagtagtcttcagctatcaaaatcgtgtcacg-ttttgccaaatcgtgacacagttggtgcctacggcccaaggtacgaccaatcttattctgaaaa- 4731399  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
      || |||||||||| |||||| ||||| | ||| ||||||||||||||||||||    
T  4731398 cgtgtccagcaagccgaaaatcatgtcatgttttcccaaaatcgtgtcacgattg 4731344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 5702303 - 5702061
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||  |||    
T  5702303 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaacctctccttcaaaatctgcacaagaacacttatatagcagtc 5702205  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||| |||||||| ||  ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||| | | ||||||    
T  5702204 ttcagctgtcaaaatcgtgacacgttttgcca-aatcgtgacacgattggtgcgtacaatccaaggtacgaccaaccttatcctgaaaa-tgtacccagc 5702107  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||||||||||||||| ||||||||    
T  5702106 aagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattg 5702061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 209
Target Start/End: Complemental strand, 33352088 - 33351893
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | | |||||||||||||||||||||||||||| | ||| |||||||||| ||||||||| |||||    
T  33352088 agaactctaatcaaagaccctcaaccctaaagttaccttctttgatttcccaagtttctctctcttccacctcaccttcaaaatttgcaaagaaaactta 33351989  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaa 209  Q
    |||||  |||||| || ||||||||||||||||| ||||||| |||| || |||| ||| |||||| || ||||||||| |||||||||||||||||    
T  33351988 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcatgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcctgaa 33351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 27811216 - 27811080
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||||||| || | |||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  27811216 agaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaattttctctctcttccagctttccttcaaaatatgcaaagaacactta 27811117  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgttt 149  Q
    |||||  |||||| || |||||||||||| |||||||    
T  27811116 tatagcagtcttcagctgtcaaaatcgtgacacgttt 27811080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 23799399 - 23799221
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||  |||    
T  23799399 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctatccttcaaaatatgcacaagaacacttatatagcagtc 23799301  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttat 203  Q
    ||| || |||||||||||||||||||| | || ||||||| ||| |||| ||||||||| |||| |||| |||||||||||    
T  23799300 ttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttat 23799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 4733747 - 4733610
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctct--ctcttcaagctctccttcaaaatctgc--aaagaaca 109  Q
    |||||||||||||||||| || |||||||||||| | || |||||||||||||||||||||  |||||||| ||||||||||||||||||  ||||||||    
T  4733747 agaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttctctctctcttcaacctctccttcaaaatctgcaaaaagaaca 4733648  T
Q  110 cttatatagttgtcttctgc-gtcaaaatcgtgtcacg 146  Q
    |||||||||| ||||||  | |||||||||||| ||||    
T  4733647 cttatatagtagtcttcaactgtcaaaatcgtgacacg 4733610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 17982329 - 17982250
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  17982329 ccaaaatcgtgtcacgattgccaaatcatgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaacaa 17982250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 7412614 - 7412769
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  7412614 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 7412712  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 181  Q
    ||| || |  ||||||||| ||||||||  || |||||||||| ||||||| |||||||    
T  7412713 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccatgattgatacgtacga 7412769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 267
Target Start/End: Original strand, 4743463 - 4743676
Alignment:
Q  54 tttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaa-cacttatatagttgtcttctgc-gtcaaaatcgtgtcacgttttt 151  Q
    |||||||||||||||||  ||||||| || | | | |||||||||||||||||| |||||||||||  ||||||  | ||||||  ||||| |||||||     
T  4743463 tttgatttcccaagttttcctctcttgaaccac-ctttcaaaatctgcaaagaaacacttatatagcagtcttcatctgtcaaatacgtgtgacgttttg 4743561  T
Q  152 ccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaa 251  Q
    ||  ||| ||| |||| ||||||||||||| ||| ||||| |||||||||||||||||||   |||| |||||| | |||||||||||||| ||   |||    
T  4743562 cca-aattgtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacgtttcctcaa 4743660  T
Q  252 aatcgtgtcacgattg 267  Q
    ||||||||||||||||    
T  4743661 aatcgtgtcacgattg 4743676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 11383584 - 11383474
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||||||||||||| |||| |||| |||||||||||| ||||||||| |||||||||||  |||||||||||||| ||| ||||||||    
T  11383584 aatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaattt-gcccagcaagctgaaaatcgtgtcacgttttcccaaaatc 11383486  T
Q  256 gtgtcacgattg 267  Q
    ||||||| ||||    
T  11383485 gtgtcacaattg 11383474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 42435558 - 42435691
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||| ||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||  ||||| |||||| | |||    
T  42435558 caaaatcatgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgccaagcaagacgaaa 42435655  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||  ||||||||||||||||||||    
T  42435656 atcgtgtcacgtttccccaaaatcgtgtcacgattg 42435691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 44303529 - 44303454
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  44303529 aaattgtgtcacgattgccaaattgtgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaaca 44303454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 1746730 - 1746808
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | | ||||||||||||||| ||||    
T  1746730 ccaaaatcgtgtcacgattgccaaattgtgtcacgatttctctgcttcccaactatacaatttgaagacatacacaaca 1746808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 19948814 - 19948884
Alignment:
Q  249 caaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacata 319  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  19948814 caaaatcgtgtcacgattgtcaaatcgtgtcacgatttctctgcttcccaaatttgcaatttgaagacata 19948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 2627676 - 2627581
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  2627676 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttc-aaatctgcacaagaacactta 2627581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 3051394 - 3051581
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagttgtc 123  Q
    |||||||||| ||||||||||||   ||||||    |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||  ||    
T  3051394 caaagacactcaaccctaaagttctctcctttatagtcccaagtttctctctcttcaagctctctttcaaaatctgcatagaaacacttatatagtactc 3051493  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | | ||  ||||||| ||||||||  || ||  | ||||| |||||||||||| ||||| |||| |||| |||||||||||| ||||||    
T  3051494 tgcagctatcaaaattgtgtcacg-attgccaaattcgtgtcacgattgatgcatacgacccaatgtacgaccaaccttatcttgaaaa 3051581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 10014955 - 10014845
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||||||||||| ||||| ||||||||| ||||||||||||||| |||   |||| |||| |||||||||||||||| ||||  ||||||||    
T  10014955 aatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 10014857  T
Q  256 gtgtcacgattg 267  Q
    ||||||||||||    
T  10014856 gtgtcacgattg 10014845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 4696431 - 4696306
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| ||||||||||||   ||||||| |   |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||   |||    
T  4696431 caaagacactcaaccctaaagttatctcctttg-taatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacccttatataacggtc 4696333  T
Q  124 ttctgc-gtcaaaatcgtgtcacgttt 149  Q
    ||| || ||||||||||||||||||||    
T  4696332 ttcagctgtcaaaatcgtgtcacgttt 4696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 27811094 - 27810984
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttc-caaaat 254  Q
    ||||||| |||| ||| ||||||| | ||||| ||| ||||||||||||||||||| || |||||||||||| ||||||||||||| |||||| ||||||    
T  27811094 aatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaactt-gcccagcaagccgaaaatcgtgtcac-attttctcaaaat 27810997  T
Q  255 cgtgtcacgattg 267  Q
    |||||||||||||    
T  27810996 cgtgtcacgattg 27810984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 4456305 - 4456419
Alignment:
Q  28 agacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttc 126  Q
    ||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||||||    
T  4456305 agacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctcttcttcaaaatctgcacaagaacacttatatagccgtcttc 4456403  T
Q  127 tgc-gtcaaaatcgtg 141  Q
     || ||||||||||||    
T  4456404 agctgtcaaaatcgtg 4456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 34257019 - 34257075
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  34257019 aaatcgtgtcacgatttctctgcttcccaactgtgcaatttgaagacatacataaca 34257075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 22976119 - 22976002
Alignment:
Q  149 tttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttc 248  Q
    |||||| ||||||| |||| ||| ||||| ||| |||| |||| || |||||||||||||||| || | | |||||||  |||||||||||||| ||| |    
T  22976119 tttcccgaatcgtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaactt-gtcaagcaagctgaaaatcgtgtcacgttttcc 22976021  T
Q  249 caaaatcgtgtcacgattg 267  Q
    |||||||||||||||||||    
T  22976020 caaaatcgtgtcacgattg 22976002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 4283116 - 4283036
Alignment:
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    |||| ||| ||| ||||| ||||||||| ||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  4283116 cacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaactt-gcccagcaagccgaaaatcgtgtcacgatt 4283036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 31217909 - 31217860
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacata 319  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31217909 aaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacata 31217860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 1872175 - 1872237
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatc 98  Q
    |||||||||||| ||| |||||||||| |||||||||||||||| ||||||||| ||||||||    
T  1872175 aaccctaaagttactttctttgatttctcaagtttctctctcttgaagctctccctcaaaatc 1872237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 34254843 - 34254893
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatac 320  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  34254843 aaatcatgtcacgatttctctgcttcccaactttgcaatttgaagacatac 34254893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 5689209 - 5689136
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || ||||||||||||   |||||||||||||| |||||||||||||| |||||||    
T  5689209 agaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttctctctcttgaagctct 5689136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 19945855 - 19945904
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacata 319  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  19945855 aaatcgtgtcacgatttctctgcttctcaactttgcaatttgaagacata 19945904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 1292693 - 1292768
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctcc 89  Q
    |||||||||||||||||| || |||||||||||| | || |||||||| ||||||||  ||||||| |||||||||    
T  1292693 agaactctaatcaaagaccctcaaccctaaagttacctcatttgattttccaagttttcctctcttgaagctctcc 1292768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 267
Target Start/End: Complemental strand, 19175445 - 19175314
Alignment:
Q  134 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaa 232  Q
    ||||||| |||||||||  || ||||||| |||||||| ||| ||||| |||||||| ||||||||||||||||||||   | |||||||||    ||||    
T  19175445 aaatcgtatcacgtttt--ccaaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaa-cgtacccagcaagtttgaaaa 19175349  T
Q  233 tcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    || ||||||| ||| ||||||||||| ||||||||    
T  19175348 tcatgtcacgttttcccaaaatcgtgacacgattg 19175314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 40221342 - 40221232
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||| ||||||||| |||||| || || ||||||||||||||||   || ||| |||||  |||||||||||||| ||| ||||||||    
T  40221342 aatcgtgacacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaa-cgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaatc 40221244  T
Q  256 gtgtcacgattg 267  Q
    ||| ||||||||    
T  40221243 gtgacacgattg 40221232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 3303900 - 3303982
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaa 96  Q
    ||||| |||||||||||| || |||| ||||||| | |||||||||||||||||||| |||||||| || ||| || ||||||    
T  3303900 agaaccctaatcaaagaccctcaaccgtaaagttacctcctttgatttcccaagtttttctctcttgaacctccccctcaaaa 3303982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 6598910 - 6598836
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  6598910 agaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcctctcttgaagttctc 6598836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 6674363 - 6674289
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  6674363 agaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcctctcttgaagttctc 6674289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 12703151 - 12703221
Alignment:
Q  249 caaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacata 319  Q
    |||||||||| |||| |||||||||| ||||||||||| |||  || |||||||||| |||||||||||||    
T  12703151 caaaatcgtgacacgcttgccaaatcatgtcacgatttatctattttccaactttgcaatttgaagacata 12703221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 10929738 - 10929666
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||||||||| | || |||||||||| | ||||||||||||||||||||  ||||||| |||||||    
T  10929738 agaactctaatcaaagaccccaa-ccctaaagttacctcctttgatttcccaagttttcctctcttgaagctct 10929666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 40321005 - 40320940
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    ||||| |||||||||||| || ||||| |||||| | |||||||||||||| ||||||||||||||    
T  40321005 agaaccctaatcaaagaccctcaacccgaaagttacctcctttgatttccctagtttctctctctt 40320940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 10015086 - 10015030
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    |||||||||||||||||| || |||| ||||||| | ||||||||||||||||||||    
T  10015086 agaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 10015030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 19175577 - 19175448
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc---tctccttcaaaatctgca-aagaacacttatatagtt 120  Q
    |||||||||| |||||||||||| | ||||||| |   ||||||||||||| ||||||||   |||||||||||| ||| | |||||||||||||||       
T  19175577 caaagacactcaaccctaaagttacctcctttg-taatccaagtttctctcacttcaagctgatctccttcaaaaactgtacaagaacacttatataaca 19175479  T
Q  121 gtcttctgc-gtcaaaatcgtgtcacgtttt 150  Q
    |||||| || ||||||||||| |||||||||    
T  19175478 gtcttcagctgtcaaaatcgtatcacgtttt 19175448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 4696320 - 4696265
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||    
T  4696320 aatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 4696265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 4733621 - 4733511
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||| ||||||||| ||||||||| || |||  |||||||||||  | |   || ||||| |||||||||||||| ||| ||||||||    
T  4733621 aatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgt-gtttagaaagccgaaaatcgtgtcacgttttcccaaaatc 4733523  T
Q  256 gtgtcacgattg 267  Q
    ||||||||||||    
T  4733522 gtgtcacgattg 4733511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 28307836 - 28307907
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaa 96  Q
    |||||||||| ||| |||||||| | |||||||   ||| |||||||||||||||||||||||| |||||||    
T  28307836 caaagacactcaactctaaagttacctcctttgtaatcctaagtttctctctcttcaagctctcattcaaaa 28307907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 41365077 - 41365151
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | || ||||||||| |||||||  ||||||| ||| ||||    
T  41365077 agaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcacaagttttcctctcttgaagttctc 41365151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 18141758 - 18141685
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || ||||||||| || | ||||| ||||| || |||||||||||||| |||||||    
T  18141758 agaaccctaatcaaagaccctcaaccctaaaattacctccttcgattttcctagtttctctctcttgaagctct 18141685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 30291530 - 30291457
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| ||||||||||||  | |||||||||||| | ||||||||||| || ||||||||| |||| |||||||    
T  30291530 agaaccctaatcaaagaccatcaaccctaaagttacctcctttgattttcctagtttctctttcttgaagctct 30291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 2627464 - 2627428
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2627464 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 2627428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 3439447 - 3439292
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaag--tttctctctcttcaagctctc-cttcaaaatctgca-aagaacact 111  Q
    |||||||||||||| | |||||||||| |||| || ||||||||||| ||||  | ||||||||||| | ||||| |||| ||||||||| |||||||||    
T  3439447 actctaatcaaagaaccctaaaccctagagtttctccctttgatttctcaagtctctctctctcttccaactctctcttc-aaatctgcacaagaacact 3439349  T
Q  112 tatatagttgtctt-ctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgat 169  Q
    | |||| | ||||| ||  ||  ||||||||||||| |||| |||||||||||||||||    
T  3439348 t-tatactagtcttcctctgttgaaatcgtgtcacgatttt-cccaatcgtgccacgat 3439292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 7289572 - 7289537
Alignment:
Q  231 aatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7289572 aatcgtgtcacgattttccaagatcgtgtcacgatt 7289537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 19752217 - 19752124
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  || ||||||||| |||| ||||||| ||||||||||||||    
T  19752217 caaagacactcaaccctaaagttacctcctttgcgatcc-aagtttctctctctaaaacctctccttc-aaatatgcaaagaaacacttatatagt 19752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 29796575 - 29796618
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    |||||||||||| | |||||||||||| ||||||||||||||||    
T  29796575 aaccctaaagttacctcctttgatttctcaagtttctctctctt 29796618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 39784400 - 39784361
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  39784400 aatcgtgtcacgattccaaaatcgtgtcacgatttctctg 39784361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 1345601 - 1345655
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagt 68  Q
    ||||||||||||||| || || |||||||||||| | ||||||||||| ||||||    
T  1345601 agaactctaatcaaaaaccctcaaccctaaagttacatcctttgattttccaagt 1345655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 5990385 - 5990315
Alignment:
Q  26 aaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaa 96  Q
    ||||||||| |||||||||||| |   |||||  || |||||||||||||||||| |||||||||| ||||    
T  5990385 aaagacactcaaccctaaagttaccgtctttgtatttccaagtttctctctcttctagctctccttaaaaa 5990315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 11712244 - 11712306
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||| |||||||||||| | || ||||||  || ||||||||||||||| |||||||    
T  11712244 caaagacactcaaccctaaagttacctcatttgataccctaagtttctctctcttgaagctct 11712306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 32902439 - 32902493
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctcct 90  Q
    |||||||||||| | || | |||||||||||||||||||||||| |||| |||||    
T  32902439 aaccctaaagttacctcatctgatttcccaagtttctctctcttgaagccctcct 32902493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 1261561 - 1261524
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  1261561 aaaatcgtgtcacgatttcccaagatcgtgtcacgatt 1261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 9765675 - 9765622
Alignment:
Q  24 tcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    ||||||||||| |||||| ||||| | |||||||  ||||||||||||||||||    
T  9765675 tcaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 9765622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 31043148 - 31043094
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    |||||||||||||||||| |  || ||||||||||||| |||| |||||||||||||    
T  31043148 aaaatcgtgtcacgatttcc--aagtcgtgtcacgatttccaagtcgtgtcacgatt 31043094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 31043148 - 31043111
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatttc 287  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  31043148 aaaatcgtgtcacgatttccaagtcgtgtcacgatttc 31043111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 1261656 - 1261620
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgattt 286  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  1261656 aaaatcgtgtcacgatttccagatcgtgtcacgattt 1261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 4759610 - 4759570
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  4759610 aaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctg 4759570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 10683815 - 10683775
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  10683815 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 10683775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 18870097 - 18870057
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  18870097 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 18870057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 25689898 - 25689838
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctct 76  Q
    |||||||||||||| | |||||||||| || | || ||||||||||||||||| |||||||    
T  25689898 actctaatcaaagaaccctaaaccctagagcttctccctttgatttcccaagtctctctct 25689838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 30656206 - 30656246
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  30656206 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 30656246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 33037363 - 33037323
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  33037363 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 33037323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 36979938 - 36979978
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  36979938 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 36979978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 45099693 - 45099440
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  45099693 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctacaaagaacactta 45099594  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  45099593 tatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatc 45099494  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  45099493 ttgcccagcaagccaaaaatcgtgtcacaatttcccaaaattgtgtcacgattg 45099440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 319
Target Start/End: Original strand, 4503362 - 4503676
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4503362 agaactctaatcaaagaacctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttctagctctccttcaaaatctgcaaagaacactta 4503461  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||     
T  4503462 tatagttgtcttctacgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 4503561  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttcc------aaaatcgtgtcacg--attgcc-aaatcgtgtcacgatttctctgcttcccaactttg 304  Q
    ||||||||||||||||||||||||||||||||   |      |||| |   || ||  ||| || |||||||||||||||||||||||||||||||||||    
T  4503562 ttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatttctctgcttcccaactttg 4503661  T
Q  305 ctatttgaagacata 319  Q
    | |||||||||||||    
T  4503662 caatttgaagacata 4503676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 36205893 - 36206126
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36205893 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacactta 36205992  T
Q  114 tata--gttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||||  | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  36205993 tatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacaatccaaggtacgaccaaccttatcctgaaaa 36206092  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    | || |||||||||||||||||||||||||||||    
T  36206093 tctttcccagcaagccaaaaatcgtgtcacgatt 36206126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 5723484 - 5723715
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  5723484 agaactctaatcaaagaccccaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcttcttcaaaatctgcaaagaacattta 5723583  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  5723584 tatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatc 5723683  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||| ||||||||||||||||||||||||||||    
T  5723684 ttgtccagcaagccaaaaatcgtgtcacgatt 5723715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 2334647 - 2334878
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||| || || |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2334647 agaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacactta 2334746  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||     
T  2334747 tatagcagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatc 2334846  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||||||||||||||||||||||||||||    
T  2334847 ttgcccagcaagccaaaaatcgtgtcacgatt 2334878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 36988305 - 36988558
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36988305 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatatgcaaagaacactta 36988404  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| |||||||||||||||||| |||| |  |||||||| ||| |||||||||||||| ||||||||| |||||||||||||||||||      
T  36988405 tatagcagtcttcagcgtcaaaatcgtgtcacattttccatcaatcgtgtcacaattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaaac 36988504  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||| | |||||||||||||| ||| |||||||| |||||||||||    
T  36988505 ttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcatgtcacgattg 36988558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 6595236 - 6595477
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6595236 agaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcctaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 6595335  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  ||||||  |||||||||||||||||||||| |  |||||||| || ||||||||||||||            || |||||||||||||||||     
T  6595336 tatagcagtcttcaacgtcaaaatcgtgtcacgttttccatcaatcgtgtcaagattgatgcgtacg------------actaaccttatcctgaaaatc 6595423  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  6595424 tagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 6595477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 36318241 - 36318492
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttata 115  Q
    ||||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  36318241 aactctaatcaaagacattcaaccctaaagttacctcctttgatttcccaagtttctctctcttttacctctccttcaaaatctgcaaagaacacttata 36318340  T
Q  116 tagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattt 214  Q
    |||  |||||| || ||||||||||||||||| ||||  | ||| ||| |||| ||| |||||||||| |||||||| |||||||||||||||||||       
T  36318341 tagcagtcttcagctgtcaaaatcgtgtcacg-ttttgtcaaattgtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaa-cg 36318438  T
Q  215 tgcccagcaagccaaaaatcgtgtcacgattttcc-aaaatcgtgtcacgattg 267  Q
    || |||||||||| |||||||||||||| ||  || ||||||||||||||||||    
T  36318439 tggccagcaagccgaaaatcgtgtcacgtttccccaaaaatcgtgtcacgattg 36318492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 265
Target Start/End: Complemental strand, 39284823 - 39284585
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39284823 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctctccttcaaaatctgcaaagaacactta 39284724  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||| ||||||| ||||||| ||||||| |||  ||| ||||||||            |||||||||||||||||||     
T  39284723 tatagcagtcttcagctgtcaaaatcatgtcacg-ttttcccaaatcgtgacacatttggtgcgtacg------------accaaccttatcctgaaaac 39284637  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgat 265  Q
    ||| ||||||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  39284636 ttt-cccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgat 39284585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 51 - 267
Target Start/End: Original strand, 2837111 - 2837326
Alignment:
Q  51 tcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgttt 149  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||  |||||| || ||||||||||||| ||| ||    
T  2837111 tcctttgatttcccaagtttctctctcttcaaactctccttcaaaatttacaaagaacacttatatagcagtcttcagctgtcaaaatcgtgttacg-tt 2837209  T
Q  150 ttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttcc 249  Q
    ||||| |||| || |||| ||| ||||||||| ||||||||| |||||||||||||||||||  || |||||||||   |||||||||||||| ||| ||    
T  2837210 ttcccaaatcatgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttacccagcaaggtgaaaatcgtgtcacgttttccc 2837308  T
Q  250 aaaatcgtgtcacgattg 267  Q
    ||||||||||||||||||    
T  2837309 aaaatcgtgtcacgattg 2837326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 29867807 - 29867565
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||| | |||| | | |||||||| || ||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  29867807 agaactctaatcaaagaccctcaacccaatagttaccttctttgattcccaaagtttctctctctttaagctctctttcaaaaactgcaaagaacactta 29867708  T
Q  114 tatagttgtcttc-tgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| |  ||||||||||||||||||||||||| ||||||| |||| ||| |||            ||||||||||||||||| ||||||     
T  29867707 tatagcagtcttcatctgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtttggtgc------------gtacaaccaaccttatcttgaaaaa 29867620  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||| | |||||||||||||| ||| ||||||||||||||||||||    
T  29867619 cttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 29867565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 34389125 - 34389366
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||  |||||||||||| | |||||||   ||| ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||  |||    
T  34389125 caaagacacacaaccctaaagttacctcctttgtaatcc-aagtttctctcacatcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 34389223  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||||  || ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   | ||||||    
T  34389224 ttcagctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccagc 34389320  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||||||||||||||||    
T  34389321 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 34389366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 38312178 - 38312045
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||  || |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38312178 agaactctaatcaaagaacctcaaccctaaagttacctcctttgatttcccaaatttctctctcttcaagctctccttcaaaatctgcaaagaacactta 38312079  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacg 146  Q
    |||||  |||||| || |||||||||||||||||    
T  38312078 tatagcagtcttcagctgtcaaaatcgtgtcacg 38312045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 33528447 - 33528205
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  33528447 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 33528349  T
Q  124 ttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| |  || ||||||||||||||||| | || ||||||| |||||||| ||||||||| ||||||||| | ||||||||| |||||||   | ||||||    
T  33528348 ttcagttgttaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaa-cgtacccagc 33528251  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||||||| ||||||||    
T  33528250 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 33528205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 20522496 - 20522737
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||  |||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||  ||     
T  20522496 caaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctctctccaagctcaccttcaaaatctgcagaagaacacttttatagcagtt 20522594  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||  || |||||||||||||||||||| |||  ||| ||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   ||||||||    
T  20522595 tttagctgtcaaaatcgtgtcacgtttgtcca-aattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagc 20522692  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||||| |||  |||||||||| ||||||||    
T  20522693 aagttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattg 20522737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 21630219 - 21630460
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| ||| |||||||| | |||||||   ||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||  |||    
T  21630219 caaagacactcaacactaaagttacctcctttgtaatcc-aagtttctctcccttcaagctctccttcaaaatctacacaagaacacttatatagcagtc 21630317  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||  || |||||||||||||||||||| | || ||||||| |||||||| || |||||| |||| |||| |||||||||||||||||||   ||||||||    
T  21630318 tttagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaa-cgtgcccagc 21630415  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||| | ||| ||||||| ||| ||||||||    
T  21630416 aagttgaaaatcgtgtcatgttttcccaaaattgtgacacgattg 21630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 28258999 - 28258815
Alignment:
Q  26 aaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtct 124  Q
    ||||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||  ||||    
T  28258999 aaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctcttcttcaaaatctacacaagaacacttatatagcagtct 28258901  T
Q  125 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    || |  |  ||||||||| ||||||||  || |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  28258900 tcagttgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 23078294 - 23078109
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| ||||| |||||| | |||||||   ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||    
T  23078294 caaagacactcaacccaaaagttacctcctttgtaatcc-aagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 23078196  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||  | |||||||| ||||||||||||  || ||||||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||    
T  23078195 ttcaactgtcaaaattgtgtcacgtttt--ccaaatcgtggcacgattggtgcgtacgacccaagatacgaccaaccttatcctgaaaa 23078109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 33118409 - 33118650
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  ||||||| |||||||||||||| ||||||||||||||||  |||    
T  33118409 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctctaaaagctcttcttcaaaatctgcacaagaacacttatatagcagtc 33118507  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| |  ||||||||||||||| |||| |||  ||||||| |||||||| ||||||||| |||||||||  ||||||||||| |||||| | ||||||||    
T  33118508 ttcagttgtcaaaatcgtgtcatgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacggccaaccttatcttgaaaa-tgtgcccagc 33118605  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   ||||| |||||||| ||| | |||| |||| ||||||||    
T  33118606 aagttgaaaattgtgtcacgttttcctaaaaacgtgacacgattg 33118650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 14698832 - 14698600
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  ||||||||||||||||||| || ||||||||||||||||  |||    
T  14698832 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctctaaaagctctccttcaaaatctacacaagaacacttatatagcagtc 14698734  T
Q  124 ttctgcg-tcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    |||  |  ||||||||||||||||||| |||  |||||||  | | ||| ||||||||| ||||||||| ||||||||||||||||||| | |||||| |    
T  14698733 ttcaactatcaaaatcgtgtcacgtttgtcca-aatcgtgaaatggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-tgtgcccaac 14698636  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtg 258  Q
    |||   |||||||||||||| ||| |||||||||||    
T  14698635 aagttgaaaatcgtgtcacgttttcccaaaatcgtg 14698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 10707036 - 10706890
Alignment:
Q  65 aagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 162  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||  |||||| || |||||||||||||||||||||  || || ||||    
T  10707036 aagtttctctctcttccagctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaaccgtg 10706939  T
Q  163 ccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
     |||||||| || |||||| ||||||||| |||||||||||||| ||||    
T  10706938 gcacgattggtgtgtacgacccaaggtacgaccaaccttatccttaaaa 10706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 17057599 - 17057732
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  | |||||||||||| | ||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||    
T  17057599 agaactctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctctctcttcaaactctccttcaaaatctgcaaagaacactta 17057698  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacg 146  Q
    |||||  |||||| || |||||||  ||||||||    
T  17057699 tatagcagtcttcagctgtcaaaaatgtgtcacg 17057732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 17085582 - 17085715
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  | |||||||||||| | ||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||    
T  17085582 agaactctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctctctcttcaaactctccttcaaaatctgcaaagaacactta 17085681  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacg 146  Q
    |||||  |||||| || |||||||  ||||||||    
T  17085682 tatagcagtcttcagctgtcaaaaatgtgtcacg 17085715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 13569640 - 13569846
Alignment:
Q  63 ccaagtttctctctcttc-aagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatc 159  Q
    |||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||| |||||| || |||||||||||||||  |||||||  ||||    
T  13569640 ccaagtttctctctctcccaagctctcctttaaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttcca-aatc 13569738  T
Q  160 gtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc-aagccaaaaatcgtgtcacgattttccaaaatcgtg 258  Q
    ||| |||||||| ||| ||||||||||||||| | |||||||||||||||||   | |||||| ||    |||||||||||||| |||||||||||  ||    
T  13569739 gtgacacgattggtgcttacgatccaaggtacga-caaccttatcctgaaaaacgtacccagcaaatttgaaaatcgtgtcacgtttttccaaaattatg 13569837  T
Q  259 tcacgattg 267  Q
     ||||||||    
T  13569838 acacgattg 13569846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 36206156 - 36206227
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacata 319  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  36206156 ccaaaatcgtgtcacgattgccaaatcatgtcacgatttctctgcttcccaactttgcaatttgaagacata 36206227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 34389395 - 34389473
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    ||||||||||| |||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  34389395 ccaaaatcgtgacacgcttgccaaatcgtgtcatgatttctctgctttccaactttgcaatttgaagacatacataaca 34389473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 36988587 - 36988668
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaatt 329  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  36988587 ccaaaatcgtgacacgcttgccaaatcgtctcacgatttctctgctttccaactttgcaatttgaagacatacacaacaatt 36988668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 328
Target Start/End: Original strand, 2334908 - 2334988
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaat 328  Q
    ||||||||||| || | |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  2334908 ccaaaatcgtgacatgcttgccaaatcgtatcacgatttctctgcttcccaactttgcaatttgaagacatacacaacaat 2334988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 264
Target Start/End: Complemental strand, 8389935 - 8389732
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    |||||||||||||||||| |||||| |||||||||||||| | ||||||||| |||   |||||| ||  |||||||||||||| |||||| || ||||     
T  8389935 ccaagtttctctctcttccagctctacttcaaaatctgcacaggaacacttaaataacagtcttcagctatcaaaatcgtgtcatgttttt-ccaaatca 8389837  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgt 259  Q
    || || ||||| ||||||||| |||||||||  ||||||||||||||||||   | | |||||||    |||||||||||||| ||| |||||||||||     
T  8389836 tgacatgattggtgcgtacgacccaaggtacgtccaaccttatcctgaaaaacgtactcagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtga 8389737  T
Q  260 cacga 264  Q
    |||||    
T  8389736 cacga 8389732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 32289506 - 32289411
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||||||||||    
T  32289506 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccatctc-ccttcaaaatctgcacaagaacactta 32289411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 36757585 - 36757458
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttg-atttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgt 122  Q
    |||||||||| |||||||||||| | ||||||| | ||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||   ||    
T  36757585 caaagacactcaaccctaaagttacctcctttgtaatt--caagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatataacagt 36757488  T
Q  123 cttctgc-gtcaaaatcgtgtcacgttttt 151  Q
    |||| || ||||||||||||||||| ||||    
T  36757487 cttcagctgtcaaaatcgtgtcacgatttt 36757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 4484565 - 4484660
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | ||||| ||| ||||||||| |||||||||||    
T  4484565 ctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctctttc-aaatctgcacaagaacactta 4484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 29867536 - 29867457
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgc-tatttgaagacatacataaca 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| ||||    
T  29867536 ccaaaatcgtgtcacgcttgccaaatcgtgtcacgatttctctgttttccaactttgcaaatttgaagacatacacaaca 29867457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 30833279 - 30833171
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatat 116  Q
    ||||||||||| || |||||||||| |||| || ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||| ||||||||||| ||    
T  30833279 ctctaatcaaaaaccctaaaccctagagttactccctttgatttcccaagtttctttctcttccagctcaccttc-aaatctgcacaagaacacttaaat 30833181  T
Q  117 agttgtcttc 126  Q
    | | ||||||    
T  30833180 actagtcttc 30833171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 6266634 - 6266537
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||| |||||||||||   ||||||||| ||||||||| |||||||||||    
T  6266634 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttcccactctccttc-aaatctgcacaagaacactta 6266537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 36773487 - 36773414
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || |||||||||||| | |||||||||||||| |||||||||||||| |||||||    
T  36773487 agaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 36773414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 11151821 - 11151895
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  11151821 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 11151895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 42362290 - 42362216
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  42362290 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 42362216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 6595509 - 6595566
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  6595509 aaatcgtgacacgatttctctgcttcccaactttgcaatttgaagatatacacaacaa 6595566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 33162680 - 33162745
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    ||||| |||||||||||| || ||||||||| || | |||||||||||||||||||||||||||||    
T  33162680 agaaccctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttctctctctt 33162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 723974 - 724030
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||    
T  723974 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 724030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 35447451 - 35447575
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| |||  |||||||||| |||| ||| ||||||||| ||||||||| | |||||||||| |||||| || ||||  ||| || | |    
T  35447451 caaaatcgtgtcacgattt--cccaatcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaactt-gcccgacaaaccgata 35447547  T
Q  232 atcgtgtcacgattttccaaaatcgtgt 259  Q
    ||||||||||  ||| ||||||||||||    
T  35447548 atcgtgtcacattttcccaaaatcgtgt 35447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 45099407 - 45099351
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  45099407 aaatcgtgtcacgatttctctgcttttcaactttgcaatttgaagacatacacaaca 45099351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 267
Target Start/End: Original strand, 39483235 - 39483392
Alignment:
Q  110 cttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctga 208  Q
    |||||||||  |||||| || |||||||| ||| ||||||| |||  ||||||| |||||||| |||||| || ||||||||| ||||||||||||||||    
T  39483235 cttatatagcagtcttcagctgtcaaaattgtgccacgtttgtcca-aatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctga 39483333  T
Q  209 aaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   | |||| ||||    |||||||||||||| ||| ||||||||||| ||||||||    
T  39483334 aaa-cgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 39483392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 11690439 - 11690365
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  11690439 agaactataatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 11690365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 17863952 - 17863878
Alignment:
Q  193 accaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||||| ||||  ||||||||||||  ||||||||||||||| ||| |||||||  |||||||||||    
T  17863952 accaaccttatcctcaaaaacttgcccagcaagtaaaaaatcgtgtcacgttttcccaaaattatgtcacgattg 17863878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 11049474 - 11049402
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| ||||||||||||  | ||||||||| || | ||||||||||||||||||||||||||||| |||||||    
T  11049474 agaaccctaatcaaagaccatcaaccctaaa-ttacctcctttgatttcccaagtttctctctcttgaagctct 11049402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 11067223 - 11067154
Alignment:
Q  21 taatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctcct 90  Q
    |||||||||||| | |||| ||||||| | |||||||||||||| |||||||||||||| |||| |||||    
T  11067223 taatcaaagacaatcaaccataaagttacctcctttgatttccctagtttctctctcttgaagccctcct 11067154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 12632949 - 12633017
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc 84  Q
    |||||| || ||||||||| ||||||||||||   ||||||| ||||||||||||||||||||| ||||    
T  12632949 aactctcattaaagacactcaaccctaaagttatctcctttggtttcccaagtttctctctcttgaagc 12633017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 5723750 - 5723801
Alignment:
Q  275 gtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||| ||||    
T  5723750 gtgtcacgatttctctacttcccaactttacaatttgaagacatacacaaca 5723801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 17865590 - 17865637
Alignment:
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  17865590 cacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 17865637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 14202637 - 14202711
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||| ||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  14202637 agaactctaatcaaagaccctcaaccataaagttacctcatttgatttcccaagttttcctctcttgaagttctc 14202711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 17865479 - 17865571
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatag 118  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||| || |||||||||||||| ||||||||| |||| ||||||||||||||||    
T  17865479 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtt-ctgtctcttcaagctcttcttcaaaatttgcacaagaacacttatatag 17865571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 40015319 - 40015420
Alignment:
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
    |||||||||||| ||||||||||||||| |||||| ||||| ||||||   || | | || |||||||||||||||||||||   ||||||  |||||||    
T  40015319 cacgattgatgcttacgatccaaggtacgaccaacattatcatgaaaa-cgtgtcaatcatgccaaaaatcgtgtcacgattgctcaaaattatgtcacg 40015417  T
Q  264 att 266  Q
    |||    
T  40015418 att 40015420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 34140001 - 34140066
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    ||||||||||||||||||  | |||||||||||| | ||||||||||| ||||||||  |||||||    
T  34140001 agaactctaatcaaagactttcaaccctaaagttacctcctttgattttccaagttttcctctctt 34140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 14634056 - 14634112
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    ||||||||||||||| || || ||| |||||||| | ||||||||||||||||||||    
T  14634056 agaactctaatcaaaaaccctcaactctaaagttacctcctttgatttcccaagttt 14634112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 32247276 - 32247316
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  32247276 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 32247316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 34682154 - 34682102
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||||||||| | |||||||  ||||||||||||||||||    
T  34682154 caaagacactcaaccctaaagttacctcctttgtattcccaagtttctctctc 34682102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 40739215 - 40739250
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||| ||||||||||||||||||    
T  40739215 aaaatcgtgtcacgatttccaaatcgtgtcacgatt 40739250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 40015203 - 40015273
Alignment:
Q  30 acactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctg 100  Q
    ||||| |||||||||||| | |||||||    || || |||||||||||||||||||| ||||||||||||    
T  40015203 acactcaaccctaaagttacctcctttgtaaacctaaatttctctctcttcaagctctacttcaaaatctg 40015273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 2334767 - 2334804
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  2334767 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 2334804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 25410119 - 25410156
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  25410119 aaaatcgtgtcacgatttcccaagatcgtgtcacgatt 25410156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 30833068 - 30833031
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  30833068 aaaatcgtgtcacgatttcccaagatcgtgtcacgatt 30833031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 6266420 - 6266384
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  6266420 aaatcgtgtcacgatttcccacaatcgtgtcacgatt 6266384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 9295938 - 9295898
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  9295938 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 9295898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 11690286 - 11690239
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatc 204  Q
    ||||||| ||||||||||| |||||||||||||||| | ||||||||||    
T  11690286 aatcgtgtcacgattgatgagtacgatccaaggtacga-caaccttatc 11690239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 31056319 - 31056371
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||| ||||| | |||||||  ||||||||||||||||||    
T  31056319 caaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 31056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 39811553 - 39811513
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  39811553 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 39811513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 42269645 - 42269697
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||| ||||||| | |||||||  ||||||||||||||||||    
T  42269645 caaagacactcaaccttaaagttacctcctttgtattcccaagtttctctctc 42269697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 44310547 - 44310507
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  44310547 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 44310507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 20762610 - 20762357
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20762610 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctctttcaaaatctgcaaagaacactta 20762511  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||     
T  20762510 tatagctgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatc 20762411  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  20762410 ttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 20762357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 13316548 - 13316869
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  13316548 agaactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctctctcttcaagctcatcttcaaaatctgcaaagaacactta 13316647  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  13316648 tatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 13316747  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttcc------aaaatcgtgtcacga--ttgccaaa-tcgtgtcacgatttctctgcttcccaactttg 304  Q
    ||||||||||||||||||||||||||||||||   |      |||| |   || |||  || ||||| ||||||||||||||||||||||||||||||||    
T  13316748 ttgcccagcaagccaaaaatcgtgtcacgattagacgccctaaaaaccagctctcgacattaccaaaatcgtgtcacgatttctctgcttcccaactttg 13316847  T
Q  305 ctatttgaagacatacataaca 326  Q
    | ||||||||| ||||| ||||    
T  13316848 caatttgaagagatacacaaca 13316869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 3206925 - 3206671
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3206925 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatcttcaaagaacactta 3206826  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggt-acaaccaaccttatcctgaaaat 212  Q
    |||||   ||||| ||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||| || |||||||||||||| ||||     
T  3206825 tatagcaatcttcagcgtcgaaatcgtgtcacgtttttcccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaa 3206726  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||| | |||||||||||||| ||| ||||||| ||||||||||||    
T  3206725 cttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 3206671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 31659176 - 31658924
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  31659176 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctctctcaaaatctgcaaagaacactta 31659077  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  ||||||  | ||||||||||||||||  |||| || ||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||     
T  31659076 tatagcagtcttcaactgtcaaaatcgtgtcac-attttaccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaac 31658978  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||| |||||||||| |||||| |||||||| ||| ||||||||||||||||||||    
T  31658977 ttt-cccagcaagcaaaaaattgtgtcacgttttcccaaaatcgtgtcacgattg 31658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 49918287 - 49918035
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  | |||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49918287 agaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctacttcaaaatctgcaaagaacactta 49918188  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||  ||||||| ||||||| |||||||| || |||||| ||||||||  |||||||||||||||||||     
T  49918187 tatagcagtcttcagctgtcaaaatcgtgtcac-attttcccaaatcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaa- 49918090  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
      |||||||||||  ||||||||||||||| ||||| ||||||||||||||||||    
T  49918089 cgtgcccagcaagttaaaaatcgtgtcacgtttttcgaaaatcgtgtcacgattg 49918035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 28220456 - 28220709
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28220456 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacactta 28220555  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||  ||||||||| ||||||||| ||||||||||| || |||      
T  28220556 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttat-cttaaata 28220653  T
Q  213 tttgcccagc-aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||| |  || ||||| |||||||||||||| ||| ||||||||||||||||||||    
T  28220654 cttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 28220709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 10925161 - 10924909
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10925161 agaactataatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 10925062  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||| || ||||||||||||||||| |||| || ||||||| |||| |||||||||| || ||||||||  |||||| ||||  ||||||     
T  10925061 tataacagtcttcagctgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacggttgatgcgtatgacccaaggtatgaccaactttattttgaaaa- 10924964  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||| | |||||| |||||||||||||  ||||||||||||||||||||||||    
T  10924963 cttgcctaccaagccgaaaatcgtgtcacatttttccaaaatcgtgtcacgattg 10924909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 28223651 - 28223904
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28223651 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacactta 28223750  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||| ||| ||| |||| ||  ||||||||| ||||||||| ||||||||||| || |||      
T  28223751 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaattgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttat-cttaaata 28223848  T
Q  213 tttgcccagc-aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||| |  || ||||| |||||||||||||| ||| ||||||||||||||||||||    
T  28223849 cttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 28223904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 30476678 - 30476908
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||| || || | ||||||  || | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30476678 agaactctaatcaaataccctcagccctaacattacatcatttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 30476777  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| || |||||| ||||||| |||||||||||||| ||||||     
T  30476778 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaa- 30476875  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     ||||||||||| || |||||||||||||||||    
T  30476876 cttgcccagcaaaccgaaaatcgtgtcacgatt 30476908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 1833460 - 1833207
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||| |||||||   |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  1833460 agaactctaatcaaagaccctcaaccttaaagttatctcctttgatttcccaagtttctctctcttcaatctctcattcaaaatctgcaaagaatactta 1833361  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||| | ||||||| |||| ||| ||||||| | ||||||||  |||||||||||| ||||||     
T  1833360 tataggagtcttcagctgtcaaaatcgtgtcacg-ttttcgcaaatcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatcttgaaaaa 1833262  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | | | |||||||||||||||||||| | | ||| ||||||||||||||| ||||    
T  1833261 tgtactcagcaagccaaaaatcgtgttatgttttcccaaaatcgtgtcaccattg 1833207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 44455096 - 44454845
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttat 114  Q
    |||||||||||||||| || |||||||||||| | ||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||||||||     
T  44455096 aactctaatcaaagaccctcaaccctaaagttacctcctttgatttaccaagtttctctctctacaacctctccttcaaaatctgcacaagaacacttaa 44454997  T
Q  115 atagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||   || |  | |||||||||||| |||||||| ||  ||||||| |||| ||  ||||||||| |||||||||||||||||||||| |||||| |    
T  44454996 atagtaccctgcaactgtcaaaatcgtgccacgttttgcca-aatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaact 44454898  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | |||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  44454897 t-gcccagcaagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattg 44454845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 14 - 266
Target Start/End: Complemental strand, 3156804 - 3156554
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3156804 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttccagctctccttcaaaatctgcaaagaacactta 3156705  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||| || |||||||| |||| ||| |||| || ||  ||| |||| ||| || ||| || ||||||||| |||||||||||||||||||     
T  3156704 tataacagtcttcagctgtcaaaattgtgttacg-ttttgccaaacggtgacacgtttggtgtgtatga-ccaaggtacgaccaaccttatcctgaaaa- 3156608  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
      || ||||||| ||||||||||||| | | ||| |||||||||||||||||||    
T  3156607 cgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatt 3156554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 3189269 - 3189036
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3189269 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatcttcaaagaacactta 3189170  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggt-acaaccaaccttatcctgaaaat 212  Q
    |||||   ||||| ||||| |||| |||||                     ||||||||||||||||| ||||||| || |||||||||||||| ||||     
T  3189169 tatagcaatcttcagcgtccaaattgtgtc---------------------acgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaa 3189091  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||| | |||||||||||||| ||| ||||||| ||||||||||||    
T  3189090 cttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 3189036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 3198086 - 3197853
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3198086 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatcttcaaagaacactta 3197987  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggt-acaaccaaccttatcctgaaaat 212  Q
    |||||   ||||| ||||| |||| |||||                     ||||||||||||||||| ||||||| || |||||||||||||| ||||     
T  3197986 tatagcaatcttcagcgtccaaattgtgtc---------------------acgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaa 3197908  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||| | |||||||||||||| ||| ||||||| ||||||||||||    
T  3197907 cttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 3197853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 21536393 - 21536208
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||    
T  21536393 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 21536295  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |||||||||||||||||||||  || ||||| | |||||||| ||||||||| ||||||||| |||||||| ||||||||||    
T  21536294 ttcagctgtcaaaatcgtgtcacgtttt--ccaaatcggggcacgattggtgcgtacgacccaaggtacgaccaacctcatcctgaaaa 21536208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 37503784 - 37503921
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||  | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37503784 agaactctaatcaaagaccctcaaccctaaagtcacctcctttgatttcccaagtttctctctcttcaacctctccttcaaaatctgcaaagaacactta 37503883  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttt 150  Q
    ||||   |||||| || || ||||||||||||||||||    
T  37503884 tatatcagtcttcagctgtaaaaatcgtgtcacgtttt 37503921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 3282018 - 3282222
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||||||||||  | |||||    
T  3282018 ccaagtttctctcacttcaagctctccttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttt--caaatcg 3282115  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgt 259  Q
    || |||||||| ||||||||| ||||||||  |||||||||||| ||||||   | |||||||||    |||||||||||||| |||  ||||||||||     
T  3282116 tggcacgattggtgcgtacgacccaaggtatgaccaaccttatcttgaaaa-cgtacccagcaagtttgaaaatcgtgtcacgttttctcaaaatcgtga 3282214  T
Q  260 cacgattg 267  Q
    ||||||||    
T  3282215 cacgattg 3282222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 13598674 - 13598860
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||| ||||||| | |||||||   ||| || ||||||||||||||||||||||||||||||||||| ||||||| ||||||||  |||    
T  13598674 caaagacactcaaccataaagttacctcctttgtaatcc-aattttctctctcttcaagctctccttcaaaatctgcacaagaacatttatatagcagtc 13598772  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |||||||||||||||||||| | || ||| ||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  13598773 ttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 13598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 29652087 - 29652273
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||| ||||||||||||||||||||||||| || |||||||||||||  |||    
T  29652087 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctcttttcaagctctccttcaaaatctgcacaaaaacacttatatagcagtc 29652185  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || ||||||||| |||||||||| | || ||||||| |||||||| || |||||| ||||||||| |||||||||||||||||||    
T  29652186 ttcagctgtcaaaatcatgtcacgtttgt-ccaaatcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatcctgaaaa 29652273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 37070041 - 37070283
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||| ||||||| | |||||||   ||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||  |||    
T  37070041 caaagacactcaaccataaagttacctcctttgtaatcc-aagtttctctctcttccagctctacttcaaaatctgcacaagaacacttatatagcagtc 37070139  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||  || ||||||||  ||||||| ||||||  ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   | |||| |    
T  37070140 tttagctgtcaaaattatgtcacgattttcca-aatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccaac 37070237  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||||||| ||||||||    
T  37070238 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 37070283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 13604445 - 13604260
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||| ||| |||||||||||| | |||||||   ||| ||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||  |||    
T  13604445 caaagatactcaaccctaaagttccctcctttgtaatcc-aagtttctctctctttaagctctcctccaaaatttgcacaagaacacttatatagcagtc 13604347  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  ||||||||| ||||||||  || ||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  13604346 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 37560099 - 37560213
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||| ||||||| | || ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  37560099 agaactctaatcaaagaccctcaaccttaaagttacctcatttgatttctcaagtttctctctcttcaagctttacttcaaaatctgcaaagaacactta 37560198  T
Q  114 tatagttgtcttctg 128  Q
    || ||  ||||||||    
T  37560199 tacaggagtcttctg 37560213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 11348297 - 11348188
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||| |||||||||||||| |||| ||||||||||||||||||| || ||||| |||||| |||||||||||||| || |||||||||    
T  11348297 aatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaactt-gcccaacaagccgaaaatcgtgtcacgtttctccaaaatc 11348199  T
Q  256 gtgtcacgatt 266  Q
    |||||||||||    
T  11348198 gtgtcacgatt 11348188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 37033636 - 37033769
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    |||||| |||||||| ||| ||| ||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||  |||||| ||||| | |||    
T  37033636 caaaattgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cttgccctgcaaggcgaaa 37033733  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||| | ||  | ||||||||||||||||||    
T  37033734 atcgtgtcatgtttcccgaaaatcgtgtcacgattg 37033769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 51765329 - 51765234
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || |||||||||||||||||||||| |||||| | ||| ||||||||||||||| |||||||||||    
T  51765329 ctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctcactcttccaactc-ccttcaaaatctgcacaagaacactta 51765234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 193213 - 193080
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||||| | |||| ||| ||||||||| ||||||||| ||||| |||||||| |||| || |||||||||||| |||    
T  193213 caaaatcgtgtcacgattt-cccaaatcgcgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaaactt-gcccagcaagccgaaa 193116  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    || || ||||| ||||||||||| |||||| |||||    
T  193115 atggtatcacgtttttccaaaattgtgtcatgattg 193080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 3189007 - 3188928
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||| |||||    
T  3189007 ccaaaatcgtgacacgcttgccaaattgtgtcacgatttctctgctttccaactttacaatttgaagacatacacaacaa 3188928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 3197824 - 3197745
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||| |||||    
T  3197824 ccaaaatcgtgacacgcttgccaaattgtgtcacgatttctctgctttccaactttacaatttgaagacatacacaacaa 3197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 3206642 - 3206563
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||| |||||    
T  3206642 ccaaaatcgtgacacgcttgccaaattgtgtcacgatttctctgctttccaactttacaatttgaagacatacacaacaa 3206563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 46064849 - 46064629
Alignment:
Q  21 taatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    ||||||||||| || |||  ||||||| | | |||||||||||||||||| |||||||| ||||||||||| ||||| || |  | |||||||| |||      
T  46064849 taatcaaagaccctcaacaataaagttaccttctttgatttcccaagtttttctctcttgaagctctccttaaaaat-tgaattggaacacttaaataac 46064751  T
Q  120 tgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcc 218  Q
     |||||| || |||||||||||| || | ||  ||  ||||||| |||| ||||| ||||||| ||||||||| |||||| |||||||||||| | ||||    
T  46064750 agtcttcagctgtcaaaatcgtgacatgattggcca-aatcgtgtcacggttgatacgtacgacccaaggtacgaccaactttatcctgaaaa-tgtgcc 46064653  T
Q  219 cagcaagccaaaaatcgtgtcacg 242  Q
     |||| ||||||||||||||||||    
T  46064652 aagcatgccaaaaatcgtgtcacg 46064629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 26644684 - 26644565
Alignment:
Q  63 ccaagtttctctctcttcaagctctcc-ttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatc 159  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||  |||||| || |  ||||||||| ||||||||  || ||||    
T  26644684 ccaagtttctctctcttcaggctctcctttcaaaatctgcataagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatc 26644587  T
Q  160 gtgccacgattgatgcgtacga 181  Q
    |||||||||||| |||||||||    
T  26644586 gtgccacgattggtgcgtacga 26644565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 20762324 - 20762263
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaattat 331  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  20762324 aaatcgtgtcacgatttctctgcttcccaactttgcaatttgaaaacatacacaacaattat 20762263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 40282320 - 40282222
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc-cttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||| |||| ||||||||| |||||||||||    
T  40282320 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttccaactctctcttc-aaatctgcacaagaacactta 40282222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 13138204 - 13138286
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaa 96  Q
    ||||| |||||||||||| || |||||||||||| | |||||||||||||||||||| |||||||| ||||||| | ||||||    
T  13138204 agaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcctcaaaa 13138286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 50167418 - 50167491
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || |||||||||||| | |||||||||||||| |||||||||||||| |||||||    
T  50167418 agaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 50167491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 197138 - 197245
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc-cttcaaaatctgcaaag-aacact 111  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||| ||||||||  ||||||| ||| |||| ||  ||||||||||||| ||||||    
T  197138 agaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcctctcttgaagttctcactcaaaaatctgcaaagaaacact 197237  T
Q  112 tatatagt 119  Q
    || |||||    
T  197238 taaatagt 197245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 21053901 - 21053803
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc-cttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||| ||||||||||| | ||||| |||| ||||||||| |||||||||||    
T  21053901 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttccaactctcacttc-aaatctgcacaagaacactta 21053803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 28265802 - 28265869
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||| || |||||||||||| | |||||||||||||| |||||||||||||| |||||||    
T  28265802 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 28265869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 37879481 - 37879591
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| || | ||| ||||| ||| ||||||||| |||||||||||||| |||| || | |||| ||||  |||||||||||||  ||||||||||||    
T  37879481 aatcgtgacatgtttggtgcgtgcgacccaaggtacgaccaaccttatcctaaaaactt-gtccagtaagctgaaaatcgtgtcacatttttccaaaatc 37879579  T
Q  256 gtgtcacgattg 267  Q
    ||||||||||||    
T  37879580 gtgtcacgattg 37879591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 47098648 - 47098554
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  |||||||| |||||||||||||||| ||||||||||||||    
T  47098648 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctctaaaagctctcattcaaaatctgcaaagaaacacttatatagt 47098554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 47102662 - 47102568
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  |||||||| |||||||||||||||| ||||||||||||||    
T  47102662 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctctaaaagctctcattcaaaatctgcaaagaaacacttatatagt 47102568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 4552879 - 4553075
Alignment:
Q  26 aaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc----------cttcaaaatctgcaaagaa-cacttat 114  Q
    |||||| || |||||||||||| | |||||| ||||||||||||   ||||||| ||||||||          ||||||||||||||||||| |||||||    
T  4552879 aaagaccctcaaccctaaagttacctcctttaatttcccaagttctcctctcttgaagctctcttgaaccacccttcaaaatctgcaaagaaacacttat 4552978  T
Q  115 atagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||   |||||| || ||||||| ||||||||||||| ||  ||||||| |||| |||||||||||||  || | ||| || ||||||||||||||||    
T  4552979 ataacagtcttcagctgtcaaaaacgtgtcacgttttgcca-aatcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaaaa 4553075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 9987145 - 9987048
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||| | ||||||||| | ||| ||||| ||||||||| |||||||||||    
T  9987145 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctatctctcttccaactcaccttc-aaatctgcacaagaacactta 9987048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 15820245 - 15820175
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc 84  Q
    |||||||||||||||||| || |||||||||||| | || ||||||||||||||||| |||||||| ||||    
T  15820245 agaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttttctctcttgaagc 15820175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 777168 - 777095
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| ||||||||||||  | |||||||||||| | |||||||||||||| |||||||||||||| |||||||    
T  777168 agaaccctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 777095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 3847351 - 3847425
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| ||  ||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  3847351 agaactctaatcaaagaccctcgaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 3847425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 8551017 - 8551091
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  8551017 agaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 8551091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 9022693 - 9022655
Alignment:
Q  62 cccaagtttctctctcttcaagctctccttcaaaatctg 100  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9022693 cccaagtttctctctcttcaagctctccttcaaaatctg 9022655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 23555495 - 23555569
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||| ||||||||||  || |||||| ||||| | |||||||||||||||||||| |||||||| ||||||||    
T  23555495 agaactttaatcaaagatcctcaaccctgaagttacctcctttgatttcccaagtttttctctcttgaagctctc 23555569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 29135846 - 29135762
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcac 241  Q
    ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||   ||||||||||||  |||||| ||||||    
T  29135846 aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagcaagctgaaaatcatgtcac 29135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 45644585 - 45644658
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || ||||||||||||   |||||||||||||| ||||| |||||||| |||||||    
T  45644585 agaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttttctctcttgaagctct 45644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 834397 - 834453
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||||||||||    
T  834397 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 834453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 16455442 - 16455332
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||||||||||||| ||||||||| | ||| |||||||||||||   |||| | ||  ||||||||| ||||||||||   |||||||    
T  16455442 aatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaa-cgtgccaaacataccaaaaatcatgtcacgattgctcaaaatc 16455344  T
Q  256 gtgtcacgattg 267  Q
    || |||||||||    
T  16455343 gtatcacgattg 16455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 32889712 - 32889806
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  || |||| ||||||||| ||||||| ||||||||||||||    
T  32889712 caaagacactcaaccctaaagttacctcctttgcaatcc-aagtttctctctctaaaatctctacttcaaaatatgcaaagaaacacttatatagt 32889806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 50169462 - 50169513
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||| | |||||||||||||| |||||||||||||| |||||||    
T  50169462 aaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 50169513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 13547671 - 13547766
Alignment:
Q  148 ttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||  ||||||   ||||||||||||  ||||| |||||||||||    
T  13547671 ttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaa-cgtgcccagcaagctgaaaattgtgtcacgatt 13547766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 13549582 - 13549677
Alignment:
Q  148 ttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||  ||||||   ||||||||||||  ||||| |||||||||||    
T  13549582 ttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaa-cgtgcccagcaagctgaaaattgtgtcacgatt 13549677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 9036360 - 9036208
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctc-ttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| | |||||||||| ||||||  ||||||||||||||||| |||||||| ||||| |||  |||| ||||||||| ||||||||||     
T  9036360 actctaatcaaagaaccctaaaccctagagttgcc-cctttgatttcccaagtctctctctctttcaaactcctcttc-aaatctgcacaagaacactt- 9036264  T
Q  114 tatagttgtctt-ctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgat 169  Q
    |||| | ||||| ||  ||  ||||||||||||| |||| |||||||||| ||||||    
T  9036263 tatactagtcttcctctgttgaaatcgtgtcacgatttt-cccaatcgtgtcacgat 9036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 9986931 - 9986895
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9986931 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 9986895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 20622463 - 20622523
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctct 76  Q
    |||||||||||||| | |||||||||| ||||||| | ||||||||||||||| |||||||    
T  20622463 actctaatcaaagaaccctaaaccctagagttgctccatttgatttcccaagtctctctct 20622523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 25439475 - 25439435
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  25439475 aaatcgtgtcacgattaccaaatcgtgtcacgattgctctg 25439435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 25444668 - 25444628
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  25444668 aaatcgtgtcacgattaccaaatcgtgtcacgattgctctg 25444628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 39446006 - 39446046
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  39446006 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 39446046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 41391109 - 41391149
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  41391109 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 41391149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 13659566 - 13659621
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtt 69  Q
    |||||||||||||||||| || |||||  ||||| | |||||||||||||||||||    
T  13659566 agaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagtt 13659621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 15820090 - 15820047
Alignment:
Q  169 ttgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||    
T  15820090 ttgatgcgtacgacccaaggtacgaccaaccttatcctaaaaat 15820047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 44023452 - 44023413
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  44023452 aatcgtgtcacgattccaaaatcgtgtcacgatttctctg 44023413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 19361059 - 19361022
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  19361059 aaaatcgtgtcacgatttcccaagatcgtgtcacgatt 19361022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 19365915 - 19365878
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  19365915 aaaatcgtgtcacgatttcccaagatcgtgtcacgatt 19365878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 22819705 - 22819775
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaat 97  Q
    ||||||||||||| ||||||||| | |||||||    ||||||||||||  ||||||| ||||||||||||||    
T  22819705 caaagacactaaatcctaaagttacctcctttgtaaacccaagtttctc--tcttcaaactctccttcaaaat 22819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 19073204 - 19073256
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||| ||||| | |||||||  ||||||||||||||||||    
T  19073204 caaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 19073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 19121094 - 19121146
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||| ||||| | |||||||  ||||||||||||||||||    
T  19121094 caaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 19121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 40122450 - 40122502
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||| ||||||| | |||||||||||||||||||| |||||||| || |||||    
T  40122450 aaccataaagttacctcctttgatttcccaagtttttctctcttgaacctctc 40122502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 40816637 - 40816585
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||| ||||| | |||||||  ||||||||||||||||||    
T  40816637 caaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 40816585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 43988023 - 43987983
Alignment:
Q  253 atcgtgtcacgattgccaaatcgtgtcacgatttctctgct 293  Q
    ||||||||||||||||||||||| | ||||||| |||||||    
T  43988023 atcgtgtcacgattgccaaatcgcgacacgattcctctgct 43987983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 47703756 - 47703704
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||||||||| | |||||||  ||| ||||||||||||||    
T  47703756 caaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctc 47703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 4178713 - 4178460
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||     
T  4178713 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttctcaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttt 4178614  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  4178613 tatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 4178514  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  4178513 ttgcctaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 4178460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 24514990 - 24515221
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24514990 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctccccttcaaaatctgcaaagaacactta 24515089  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  24515090 tatagctgtcttctgcgtctaaatcgtgtcgcgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 24515189  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    |||||||||||||||||||| |||||||||||    
T  24515190 ttgcccagcaagccaaaaattgtgtcacgatt 24515221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 14 - 327
Target Start/End: Complemental strand, 35853853 - 35853529
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35853853 agaactcaaatcaaagaccctaaaccctaaagttgctacctttgatttcctaagtttctctctcttcaagctcttcttcaaaatctgcaaagaacactta 35853754  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgt--ttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  35853753 tatagctgtcttctgcgtcaaaatcgtgtcacgtttttttctccaatcgtgccacgattgatgcgtacgatccaaggtacgaccgaccttatcctgaaaa 35853654  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgattttcc------aaaatcgtgtcacg--attgcc-aaatcgtgtcacgatttctctgcttcccaactt 302  Q
      |||||||||||||||||||||||||| |||||   |      |||| |   || ||  ||| || |||||||||||||||||||||||||||||||||    
T  35853653 acttgcccagcaagccaaaaatcgtgtcgcgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatttctctgcttcccaactt 35853554  T
Q  303 tgctatttgaagacatacataacaa 327  Q
    ||| ||||||||||||||| |||||    
T  35853553 tgcaatttgaagacatacacaacaa 35853529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 23554978 - 23554725
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  | |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23554978 agaactctaatcaaagaccttcaaccctgaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 23554879  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| ||||||||||||||||||||||| |   ||||||| |||||||||||||||||| |||| |||| |||||||||||||||||||      
T  23554878 tatagcagtcttcagcgtcaaaatcgtgtcacgttttccattaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaac 23554779  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||| | |||||||||||||| ||| ||||||||||||||||||||    
T  23554778 ttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 23554725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 29990993 - 29990761
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  29990993 agaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttctctctcttcaaactcaccttcaaaatctgcaaagaacactta 29990894  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||   ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||  |||||||| | ||| |||||||| |||||     
T  29990893 tatagcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgactcaaggtacgatcaatcttatcctaaaaatc 29990794  T
Q  214 ttgcccagcaagcca-aaaatcgtgtcacgatt 245  Q
    ||||||||||||||| |||||||||||||||||    
T  29990793 ttgcccagcaagccaaaaaatcgtgtcacgatt 29990761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 47676366 - 47676618
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  47676366 agaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagtttctctctcttcaagctcctcttcaaaatctgcaaagaacactta 47676465  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   ||||||  | |||||||| |||||||| ||||||  ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||     
T  47676466 tatatcagtcttcaactgtcaaaattgtgtcacg-ttttccaaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa- 47676563  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  47676564 cttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 47676618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 14070063 - 14070316
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || | |||||||||| | |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  14070063 agaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctcctttaaaatcggcaaagaacactta 14070162  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||| ||||| ||||||||| |||||||||||| ||||||     
T  14070163 tataacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaa 14070261  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||| |||||| | |||||||||||||| ||| ||||||||||||||||||||    
T  14070262 cttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 14070316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 14380091 - 14380344
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || | |||||||||| | |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  14380091 agaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctcctttaaaatcggcaaagaacactta 14380190  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||| ||||| ||||||||| |||||||||||| ||||||     
T  14380191 tataacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaa 14380289  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||| |||||| | |||||||||||||| ||| ||||||||||||||||||||    
T  14380290 cttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 14380344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 18126582 - 18126331
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  18126582 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctattcaagctcttcttcaaaatctgcaaagaacactta 18126483  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||  || ||||||||||||||||| ||||| | ||||||| |||| ||| ||||||||| ||||||||| |||||| ||||||||||||     
T  18126482 tatatcagtctttagctgtcaaaatcgtgtcacg-ttttctcaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcctgaaaa- 18126385  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||||| |||||| |||||||| ||||| ||||||||||||||| ||||||||    
T  18126384 cttgcccaacaagccgaaaatcgtatcacgtttttccaaaatcgtg-cacgattg 18126331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 2761532 - 2761762
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||| |   | |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2761532 agaactctaatcaaatatcatcaaccctaaagttacctcctttgatttcccaagtttatctctcttcaagctctccttcaaaatctgcaaagaacactta 2761631  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||| ||||||||| ||||| |||||||||||||     
T  2761632 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaa- 2761729  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     |||||||||||||  |||||||||||||||||    
T  2761730 cttgcccagcaagctgaaaatcgtgtcacgatt 2761762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 47674173 - 47674425
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  | |||| | ||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||    
T  47674173 agaactctaatcaaagaccttcaaccttgaagttacctcctttgatttcccaagtttctctctcttcaagctcctcttcaaaatctgcaaagaacaccta 47674272  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||| ||||| | ||||||  ||||||| |||| ||| ||||||| | ||||||||| |||||||||||||||||||     
T  47674273 tatagcagtcttcagctgtcaaaatcatgtcatg-ttttccaaaatcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaa- 47674370  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  47674371 cttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 47674425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 1113595 - 1113364
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacactt 112  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||||||    
T  1113595 agaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctctctcttcaacctcttcttcaaaatctgcacagaaacactt 1113496  T
Q  113 atatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaat-cgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaa 210  Q
    |||||   || ||| || |||||||||||||||||||||   ||||| |||| |||| ||| ||||||||| ||||||||| ||||||||||||||||||    
T  1113495 atataacagtattcagctgtcaaaatcgtgtcacgtttt--gccaatacgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaa 1113398  T
Q  211 attttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    | |||||||| || ||| |||||||||||||||||    
T  1113397 a-tttgcccatcaggccgaaaatcgtgtcacgatt 1113364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 4586099 - 4585847
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||  || |||||||||||| | |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  4586099 agaactctaatcaaagagcctcaaccctaaagttacatcctttgatttcccaagtttttctctcttctaactctccttcaaaatctgcaaagaacactta 4586000  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||  || ||||||||||||||||  ||||||| ||||||| || | ||| ||||||||| ||||||||| |||||||||||  ||||||     
T  4585999 tataacagtctttagctgtcaaaatcgtgtcac-attttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatattgaaaa- 4585902  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     || |||| ||||||||||||| ||||||| ||| ||||||| ||||||||||||    
T  4585901 cttacccaacaagccaaaaatcttgtcacgttttcccaaaatagtgtcacgattg 4585847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 30024962 - 30025099
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30024962 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctcattcaaaatctgcaaagaacactta 30025061  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttt 150  Q
    |||||| |||||| || |||||||||||||||||||||    
T  30025062 tatagtagtcttcagctgtcaaaatcgtgtcacgtttt 30025099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 49091963 - 49092207
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||| ||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  49091963 caaagacactcaaccttaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 49092061  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||||   | ||||||| ||| |||| ||| ||||||||||||||| |||||||||||||||||||   | ||||||    
T  49092062 ttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaaggtacgaccaaccttatcctgaaaaacgtacccagc 49092161  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||  | |||||||||||||  ||| ||||||||||| ||||||||    
T  49092162 aagttcgaaaatcgtgtcacattttcccaaaatcgtgacacgattg 49092207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 121 - 267
Target Start/End: Complemental strand, 19495802 - 19495655
Alignment:
Q  121 gtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgccca 220  Q
    |||||| ||||| |||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  19495802 gtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgccca 19495703  T
Q  221 gcaagcca-aaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||||||||||    
T  19495702 gcaagccaaaaaatcgtggcacgttttcccaaaattgtgtcacgattg 19495655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 263
Target Start/End: Complemental strand, 48489369 - 48489120
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactt 112  Q
    ||||||||||||||||||  | |||||||||||| | |||||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||    
T  48489369 agaactctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagtttctctatcttcaatctcttcttcaaaatctgcacaagaacactt 48489270  T
Q  113 atatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | |||||   || |  | ||||||||| ||||||| |||| || ||||||| |||||||| ||||||| | ||||||||  |||||||||||||||  ||    
T  48489269 aaatagtaccctgcaactgtcaaaatcatgtcacg-ttttgccaaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctg-gaa 48489172  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
       |||||||||||||||||| ||||||||| ||| || |||||||||||||    
T  48489171 gcatgcccagcaagccaaaaaccgtgtcacgttttccctaaatcgtgtcacg 48489120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 26417254 - 26416999
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaa-----c 108  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||| ||||||| |||||  ||||||||| |||||||||||||||||||     |    
T  26417254 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttatctct--tcaagctcttcttcaaaatctgcaaagaaattaac 26417157  T
Q  109 acttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctg 207  Q
    ||||||||||  ||||||  | ||||||||||||||||| ||  ||  ||||||| |||| ||| ||||||||| ||||||||| |||||||||| ||||    
T  26417156 acttatatagcagtcttcaaccgtcaaaatcgtgtcacgattggcca-aatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttaccctg 26417058  T
Q  208 aaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||| || | ||| ||| | ||||||||||||||  ||  ||||||||||||||| ||||    
T  26417057 aaaactt-gtccaacaaactaaaaatcgtgtcacatttccccaaaatcgtgtcacaattg 26416999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 33332273 - 33332032
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaa-cacttatatagttgtc 123  Q
    |||| ||||| |||||||||||| | |||||||   ||| |||||||| |||||  ||||||||||||||||||||||||||| |||| ||||||  |||    
T  33332273 caaaaacactcaaccctaaagttacctcctttgtaatcc-aagtttctatctctcaaagctctccttcaaaatctgcaaagaaacactaatatagcagtc 33332175  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    |||  | ||||||||||||||||  || |||  ||||||| |||||||| ||||||||| ||||||||| |||||||||||| |||||| | ||||||||    
T  33332174 ttcaactgtcaaaatcgtgtcacaattgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaa-tgtgcccagc 33332077  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||||| ||||||||||||||| ||| ||||    
T  33332076 aagttgaaaatcgtgtcacgtttttccaaaatcgtgacacaattg 33332032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 266
Target Start/End: Complemental strand, 2647520 - 2647280
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| ||||||||||||   ||||||| |   ||||||||||||||||  || ||||||||||||||||||| |||||||||| |||||  |||    
T  2647520 caaagacactcaaccctaaagttatctcctttg-tagtccaagtttctctctctaaaatctctccttcaaaatctgcacaagaacacttttatagcagtc 2647422  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| ||  |||||||||| |||||||| | || ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   ||||||||    
T  2647421 ttcagctctcaaaatcgtatcacgtttgt-ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagc 2647324  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||   |||||| ||||||| ||| ||||||||||| |||||||    
T  2647323 aagttgaaaatcatgtcacgttttcccaaaatcgtgacacgatt 2647280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 25 - 245
Target Start/End: Complemental strand, 46516128 - 46515912
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtct 124  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||  ||||    
T  46516128 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctct--aagctccccttcaaaatctgcaaagaacacttatatagcagtct 46516032  T
Q  125 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagca 223  Q
    || || ||||||||||||||||| |||| || ||||||| || | ||| ||| ||||| |||||||   |||||||||||||||||||   |||||| ||    
T  46516031 tcagctgtcaaaatcgtgtcacg-ttttgccaaatcgtgacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaa-cgtgcccaaca 46515934  T
Q  224 agccaaaaatcgtgtcacgatt 245  Q
    |||||||||||||| |||||||    
T  46515933 agccaaaaatcgtgacacgatt 46515912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 48491517 - 48491286
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactt 112  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||  ||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  48491517 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttatcaagtttctctctcttcaacctcttcttcaaaatctgcacaagaacactt 48491418  T
Q  113 atatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | |||||   || |  |  |||||||| ||||||| |||| || ||||||| |||| ||| ||||||||| ||||||||| |||||||| ||| || |||    
T  48491417 aaatagtaccctgcaactatcaaaatcatgtcacg-ttttgccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttg-aaa 48491320  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
       |||||| |||||| |||||||||||||||||    
T  48491319 gcgtgcccaacaagccgaaaatcgtgtcacgatt 48491286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 14 - 266
Target Start/End: Original strand, 4538770 - 4539032
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc----------cttcaaaatctgcaa 103  Q
    |||| ||||||||||||| || |||| |||| || | ||||||||||||||||||||||  |||||| | |||||          |||||||||||||||    
T  4538770 agaattctaatcaaagactctcaaccttaaaattacctcctttgatttcccaagtttctgcctcttccacctctcttgaactatccttcaaaatctgcaa 4538869  T
Q  104 agaa-cacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaacctt 201  Q
    |||| |||||||||||  |||||  || |||||||||||||||  |||| ||  ||||||| |||| ||| ||||||||||||||||||| |||||||||    
T  4538870 agaaacacttatatagcagtctttagctgtcaaaatcgtgtcatattttgcca-aatcgtgacacgtttggtgcgtacgatccaaggtacgaccaacctt 4538968  T
Q  202 atcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
     |||||||||  ||||  ||||| || |||||||||||||| ||| |||||||||||||||||||    
T  4538969 gtcctgaaaa-cttgcttagcaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgatt 4539032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 21989182 - 21989367
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| || ||||||||| | |||||||   ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||    
T  21989182 caaagacactcaaacctaaagttacctcctttgtaatcc-aagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 21989280  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |||||||||||||||| ||||  || |||| || |||||||| |||||| || ||||||||| | |||||||||||||||||    
T  21989281 ttcagctgtcaaaatcgtgtcacatttt--ccaaatcatgacacgattgctgcgtatgacccaaggtacgatcaaccttatcctgaaaa 21989367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 44847948 - 44847763
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||| ||   ||||||||||||||||||||||||| |  |||||||| || ||||||||||||||||  |||    
T  44847948 caaagacactcaaccctaaagttacctccttt-ataatccaagtttctctctcttcaagctcttcaccaaaatctacacaagaacacttatatagccgtc 44847850  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  ||||||||| ||||||||  || |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  44847849 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 44847763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 2479611 - 2479795
Alignment:
Q  26 aaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtct 124  Q
    ||||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| | ||||    
T  2479611 aaagacactcaaccctaaagttccctcctttgtaatcc-aagtttctctctcttcaagctcttctccaaaatctgcacaagaacacttatatactagtct 2479709  T
Q  125 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||  | |  ||||||||| ||||||||  || |||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  2479710 tcaactgataaaatcgtgccacgtttt--ccaaatcatgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 2479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 43864182 - 43864080
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  43864182 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctattcttcaaaatctacaaagaacactta 43864083  T
Q  114 tat 116  Q
    |||    
T  43864082 tat 43864080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 31733199 - 31733407
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||| |||||||| | || ||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||||    
T  31733199 agaactctaatcaaagaccctcaactctaaagttacctcttttgatttctcaagtttctctctcttccagcttttcttcaaaatctgcaaagaacactta 31733298  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  ||||||      |||||||||||||||||| ||| ||||||  |||| ||| |||||||||            |||||||||||||||||| |    
T  31733299 tatagcagtcttc------aaaatcgtgtcacgtttt-cccaaatcgttacacgtttggtgcgtacga------------ccaaccttatcctgaaaact 31733379  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacg 242  Q
    | |||||||||||| ||||| ||||||||    
T  31733380 t-gcccagcaagccgaaaattgtgtcacg 31733407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 79699 - 79906
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||  | |||| ||||||||||| ||||  || |||||    
T  79699 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacatatatagtagtcttcaactgtcagaatcgtgtcacattttgtccaaatcg 79798  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgt 259  Q
    || |  ||||| ||| || || |||| |||| |||||||||||||||||||   | |||||||||    |||||| ||||||  |||||||||||||||     
T  79799 tgacgtgattggtgcatatgacccaatgtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaatcttgtcacatttttccaaaatcgtga 79898  T
Q  260 cacgattg 267  Q
    ||||||||    
T  79899 cacgattg 79906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 19502116 - 19502013
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | || ||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||    
T  19502116 agaactctaatcaaagaccctcaaccctaaagttacctcatttgatttctcaagtttgtctctctttaagctctccttcaaaatctgcaaagaacattta 19502017  T
Q  114 tata 117  Q
    ||||    
T  19502016 tata 19502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 25767186 - 25767296
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttat 114  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||     
T  25767186 aactctaatcaaagaccctaaaccctagagttgctccctttgatttctcaagtttctctctcttc-agctctccttcaaaatctgcacaagaacacttaa 25767284  T
Q  115 atagttgtcttc 126  Q
    ||| | ||||||    
T  25767285 atactagtcttc 25767296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 21983580 - 21983702
Alignment:
Q  89 cttcaaaatctgca-aagaacacttatatagttgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaa 186  Q
    |||||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||  || ||||||| ||| |||| ||||||||| ||||    
T  21983580 cttcaaaatctgcacaagaacacttatatagctgtcttcagcggtcaaaatcgtgtcacgtttt--ccaaatcgtgacacaattggtgcgtacgacccaa 21983677  T
Q  187 ggtacaaccaaccttatcctgaaaa 211  Q
    ||||| |||||||||||||||||||    
T  21983678 ggtacgaccaaccttatcctgaaaa 21983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 27347744 - 27347610
Alignment:
Q  130 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaa 229  Q
    |||||||||||||||| |||| ||| || |||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||  |||||||||||||| |    
T  27347744 gtcaaaatcgtgtcacatttt-cccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccga 27347647  T
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||| ||||| | ||| ||||||||||||||||||||    
T  27347646 aaatcatgtca-gttttcccaaaatcgtgtcacgattg 27347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 6570532 - 6570279
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacactt 112  Q
    ||||| ||| ||||||||||| || ||||||||| | |||||||||||| |||||||  | ||||| ||||||||||||||||| ||||||| |||||||    
T  6570532 agaaccctagtcaaagacactcaatcctaaagttacctcctttgatttctcaagttttcccctctttaagctctccttcaaaatatgcaaagaaacactt 6570433  T
Q  113 atatagttgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | | | | || ||| |  ||||||| |||||||||  ||  || ||||||| |||| |||||||||| || ||||||||| | |||||||||||| ||||    
T  6570432 aaacaatagttttcagttgtcaaaaacgtgtcacg-attggccaaatcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcct-aaaa 6570335  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
       || | |||| |||||||||||||||||||||  | ||||| ||||||| ||||    
T  6570334 acgtgtcaagcatgccaaaaatcgtgtcacgattgcctaaaattgtgtcacaattg 6570279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 48408738 - 48408629
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttat 114  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||     
T  48408738 aactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttc-cgctct-cttcaaaatctgcacaagaacacttaa 48408641  T
Q  115 atagttgtcttc 126  Q
    ||| | ||||||    
T  48408640 atactagtcttc 48408629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 39731310 - 39731215
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||||    
T  39731310 ctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 39731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 4796455 - 4796251
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagttgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcg 160  Q
    ||||||||||||| || |||||||| ||||||||||| || || |||||||||||||   |||||  |  ||||||||||||||||||| ||   ||| |    
T  4796455 ccaagtttctctcactccaagctcttcttcaaaatctacacaggaacacttatatagcaatcttcaactatcaaaatcgtgtcacgtttgtcta-aattg 4796357  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtc 260  Q
    ||  ||  ||| ||||||||||||||||||| ||||||  |||||||||||  | ||||| ||||   |||||||||||||| |||||||||||||||||    
T  4796356 tgatacatttggtgcgtacgatccaaggtacgaccaactctatcctgaaaacgt-gcccatcaagttgaaaatcgtgtcacgtttttccaaaatcgtgtc 4796258  T
Q  261 acgattg 267  Q
    |||||||    
T  4796257 acgattg 4796251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 2389870 - 2389760
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttc-caaaat 254  Q
    ||||||| |||| ||| || |||||||||||||||| |||||||||||||||||||  || ||||||||||  ||||||||||||| |||||| ||||||    
T  2389870 aatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgtt-cccagcaagctgaaaatcgtgtcac-attttctcaaaat 2389773  T
Q  255 cgtgtcacgattg 267  Q
    |||||||||||||    
T  2389772 cgtgtcacgattg 2389760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 6360479 - 6360612
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||  ||| ||| ||||||| |||| ||| ||||||||| ||||| ||| |||||| ||||||||||||  ||||||| |||||| |||    
T  6360479 caaaatcgtgtcacaattt-cccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaa-cttgcccaacaagccgaaa 6360576  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||  ||||||||||||||| ||||    
T  6360577 atcgtgtcacgtttccccaaaatcgtgtcacaattg 6360612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 23554696 - 23554617
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||| |||| ||||||||| || ||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  23554696 ccaaaatcgtgacacgcttgccaaattgtatcacgatttctctgctttccaactttgcaatttgaagacatacacaacaa 23554617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 43864049 - 43863947
Alignment:
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
    |||| ||| ||||||||| ||||||||| ||||||||||||||||||| ||| || | ||| || |||||||||||||| ||| ||||||||||||||||    
T  43864049 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttt-cctaacaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 43863951  T
Q  264 attg 267  Q
    ||||    
T  43863950 attg 43863947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 29990731 - 29990653
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||| ||||    
T  29990731 ccaaaattatgtcacgattgccaaatcgtatcacgatttctctgcttcccaactttgtaatttaaagacatacacaaca 29990653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 32358403 - 32358536
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||  ||||||  |||| || |||| ||| ||||||||||||||||||| | |||| ||||||||||||  | |||||||||||  |||    
T  32358403 caaaatcgtgtcacaattttcca-aatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgt-gcccagcaagctgaaa 32358500  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    || |||||||| ||| |||||||||| |||||||||    
T  32358501 attgtgtcacgttttcccaaaatcgtatcacgattg 32358536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 43504382 - 43504444
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 80  Q
    |||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||||    
T  43504382 ctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagtttctctctcttc 43504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 41317677 - 41317750
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || |||||||||||| | |||||||||||||| |||||||||||||| |||||||    
T  41317677 agaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 41317750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 3047528 - 3047603
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctg 100  Q
    |||||||||| |||||||||||| | |||||||   ||||||||||||||||||| ||||||| ||||||||||||    
T  3047528 caaagacactcaaccctaaagttacctcctttgtaatcccaagtttctctctcttaaagctcttcttcaaaatctg 3047603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 12098108 - 12098175
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||||| |||||||| |||||||    
T  12098108 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctct 12098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 2759071 - 2759113
Alignment:
Q  76 tcttcaagctctccttcaaaatctgcaaagaacacttatatag 118  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2759071 tcttcaagctctccttcaaaatctgcaaagaacacttatatag 2759113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 38671452 - 38671526
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  38671452 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 38671526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 24515255 - 24515311
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||    
T  24515255 aaatcgtgtcacgatttctctgctttccaactttgcaatttcaagacatacacaaca 24515311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 20284363 - 20284457
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||||||||| | |||||| ||   ||||||||||||||||  || |||||||||||||| ||||||| ||||||||||||||    
T  20284363 caaagacactcaaccctaaagttacctccttt-ataatccaagtttctctctctcaaaactctccttcaaaatttgcaaagaaacacttatatagt 20284457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 24789784 - 24789706
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaa 95  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||| ||||||| | ||| ||||||||||||    
T  24789784 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctct-tccaacctctccttcaaa 24789706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 36146659 - 36146725
Alignment:
Q  21 taatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||||||||| || ||| |||||||| | |||||||||||||||||||| |||||||| |||||||    
T  36146659 taatcaaagaccctcaacactaaagttacctcctttgatttcccaagtttttctctcttgaagctct 36146725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 47263995 - 47264102
Alignment:
Q  103 aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaacctt 201  Q
    ||||||||||||||||  |||||| || |  ||||||||| ||||||||  || ||||||| || ||||||| ||||||| ||||| ||| |||||||||    
T  47263995 aagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcaagattgatacgtacgacccaagatacgaccaacctt 47264092  T
Q  202 atcctgaaaa 211  Q
    ||||||||||    
T  47264093 atcctgaaaa 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 263
Target Start/End: Original strand, 496341 - 496471
Alignment:
Q  130 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaa 229  Q
    ||||||||||| ||||||||  ||  ||||||| |||| |||||||||||||  ||||||| | |||||||||||||||||| | || | |||| |||||    
T  496341 gtcaaaatcgtatcacgtttc-ccaaaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaa-tgtgtcaagcatgccaa 496438  T
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
    ||| |||| |||| |||||| ||||| |||||||    
T  496439 aaaccgtgacacg-ttttcccaaatcatgtcacg 496471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 4253782 - 4253830
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc 84  Q
    |||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  4253782 aaccctaaagttacctcctttgatttcccaagtttctctctcttaaagc 4253830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 20343840 - 20343776
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 80  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  20343840 actctaatcaaagaaccctaaaccctagagttgctccctttgattccccaagtctctctctcttc 20343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 23343912 - 23343840
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctc 86  Q
    ||||| |||||||||||| ||  ||||||||||| | ||||||||||||||||| |||||| |||| ||||||    
T  23343912 agaaccctaatcaaagactctcgaccctaaagttacatcctttgatttcccaagattctctttcttgaagctc 23343840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 2580663 - 2580757
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  || |||| ||||||||||||||||| |||||||| |||||    
T  2580663 caaagacactcaaccctaaagttacctcctttgcaatcc-aagtttctctctctaaaacctctacttcaaaatctgcaaagaaacacttaaatagt 2580757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 19495610 - 19495555
Alignment:
Q  265 ttgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatac 320  Q
    ||||||||||||||||||||||||||  || ||| |||||| ||||||||||||||    
T  19495610 ttgccaaatcgtgtcacgatttctctagtttccatctttgcaatttgaagacatac 19495555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 23565297 - 23565363
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||| || |||| ||||||| | ||||||||| ||||||||||||||||||| |||||||    
T  23565297 ctaatcaaagacccttaacc-taaagttacctcctttgatatcccaagtttctctctcttgaagctct 23565363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 24526134 - 24526201
Alignment:
Q  21 taatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    ||||||||||| || ||||||||||||   |||||||||||||| ||||| |||||||| ||||||||    
T  24526134 taatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttttctctcttgaagctctc 24526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 31105625 - 31105696
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||| ||||||||||| || |||||||||||| | |||||||||||| |||||||  ||||||| |||||||    
T  31105625 aactataatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttttcctctcttgaagctct 31105696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 21646496 - 21646533
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21646496 aaaatcgtgtcacgattttccaagatcgtgtcacgatt 21646533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 25767399 - 25767436
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25767399 aaaatcgtgtcacgatttcccaaaatcgtgtcacgatt 25767436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 30026391 - 30026481
Alignment:
Q  175 cgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||  |||||||| ||||||||||||||||||  |  |||| ||||||  |||||||||||||| ||  |||||||| |||||||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctgaaacgt--gcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacgattg 30026481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 39731194 - 39731140
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||||||  | |||||||||||||| ||| ||||||||||||||    
T  39731194 aaaatcgtgtcacgattttc--agatcgtgtcacgatttccagatcgtgtcacgatt 39731140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 496213 - 496269
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    |||||||||||||||||| || |||| ||||||| | || |||||||||||||||||    
T  496213 agaactctaatcaaagaccctcaaccttaaagttacctcatttgatttcccaagttt 496269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 4178427 - 4178371
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||||||||||| ||||||| |  |||| ||||||||| ||||    
T  4178427 aaatcgtgtcacgatttctctgcttcacaactttacattttgtagacatacacaaca 4178371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 8153261 - 8153194
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||| |  |||| ||||||| | ||||||||||| || |||||||||||||| |||||||    
T  8153261 ctaatcaaagacccccaaccttaaagttacctcctttgattttcctagtttctctctcttgaagctct 8153194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 30843476 - 30843539
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    ||||| || ||||||||| ||||| ||||||||| | ||||||||||||  |||||||||||||    
T  30843476 agaacccttatcaaagactctaaatcctaaagttacctcctttgatttcttaagtttctctctc 30843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 31518726 - 31518659
Alignment:
Q  21 taatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    ||||||||||| || ||||||||||||   ||||||||||||| ||||||  ||||||| ||||||||    
T  31518726 taatcaaagacccttaaccctaaagttatctcctttgatttccaaagttttcctctcttgaagctctc 31518659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 3050492 - 3050569
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaa 210  Q
    ||||||||||||||| ||||||  |||  || |||||||||||||||||| ||||||||| |||||  |||||| ||||    
T  3050492 caaaatcgtgtcacgattttcca-aatgatgtcacgattgatgcgtacgacccaaggtacgaccaatattatccagaaa 3050569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 25615801 - 25615727
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||| |||||||   ||||||||||||| ||||||  ||||||| ||| ||||    
T  25615801 agaactctaatcaaagacccttaaccttaaagttaactcctttgatttcctaagttttcctctcttgaagttctc 25615727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 41649240 - 41649313
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    ||||||||||| |||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  41649240 agaactctaataaaagac-cttaaccctaaagttaactcctttgatttcccaagttttgctctcttgaagttctc 41649313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 44847698 - 44847656
Alignment:
Q  249 caaaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||||  | ||||||||||||||||||||||    
T  44847698 caaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 44847656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 5817093 - 5817040
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctct 78  Q
    |||||||||| |||| ||||||| | |||||||  |||||||||||||||||||    
T  5817093 caaagacactcaaccataaagttacctcctttgtattcccaagtttctctctct 5817040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 36574746 - 36574811
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    ||||| || |||||||||  | |||||||||||| | |||||||||||| ||| ||||||||||||    
T  36574746 agaaccctcatcaaagaccgtcaaccctaaagttacctcctttgatttctcaattttctctctctt 36574811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 47264188 - 47264229
Alignment:
Q  249 caaaatcgtgtcacgattgccaaatcgtgtcacgatttctct 290  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  47264188 caaaatcgtgtcacgatgccaaaatcgtgtcacgatttctct 47264229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 2058528 - 2058568
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  2058528 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 2058568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 4873645 - 4873685
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  4873645 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 4873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 12406781 - 12406821
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  12406781 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 12406821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 18389201 - 18389233
Alignment:
Q  232 atcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||||||||||||||| ||||||||||||||    
T  18389201 atcgtgtcacgattttcccaaatcgtgtcacga 18389233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 18392637 - 18392669
Alignment:
Q  232 atcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||||||||||||||| ||||||||||||||    
T  18392637 atcgtgtcacgattttcccaaatcgtgtcacga 18392669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 20357104 - 20357064
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  20357104 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 20357064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 21640347 - 21640387
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  21640347 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 21640387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 13342999 - 13342768
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13342999 agaactctaatcagagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 13342900  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||     
T  13342899 tatagctgtcttctgcctcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatc 13342800  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||||||||||||||||||||||||||||    
T  13342799 ttgcccagcaagccaaaaatcgtgtcacgatt 13342768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 25412700 - 25412469
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25412700 agaactctaatcaaagaccctaaaccctaatgttgcctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 25412601  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  25412600 tatagatgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 25412501  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||||||||||||||||||||||||||||    
T  25412500 ttgcccagcaagccaaaaatcgtgtcacgatt 25412469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 328
Target Start/End: Complemental strand, 30182527 - 30182203
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  30182527 agaactctaatcaaagaccctaatccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctcattcaaaatctgcaaagaacacttt 30182428  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgttttt-ccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30182427 tatagctgtcttctgcgtcaaaatcgtgtcacgtttttcccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaat 30182328  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttcc------aaaatcgtgtcacg--attgcc-aaatcgtgtcacgatttctctgcttcccaacttt 303  Q
     ||||||||||||||||||||||||| ||||||   |      |||| |   |||||  ||| || ||||||||||||||||||||||||||||||||||    
T  30182327 cttgcccagcaagccaaaaatcgtgtaacgattggacgccctgaaaaccagctcacgacattaccaaaatcgtgtcacgatttctctgcttcccaacttt 30182228  T
Q  304 gctatttgaagacatacataacaat 328  Q
    || ||||||||||||||| ||||||    
T  30182227 gcaatttgaagacatacacaacaat 30182203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 327
Target Start/End: Original strand, 36074274 - 36074597
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36074274 agaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 36074373  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||     
T  36074374 tatagctgtcttctgcgtcaaaatcatgtcacgttttttcccaatcgtgccatgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatc 36074473  T
Q  214 ttgcccagcaagcc-aaaaatcgtgtcacgattttcc------aaaatcgtgtcacg--attgcc-aaatcgtgtcacgatttctctgcttcccaacttt 303  Q
    ||||||| |||||| ||||||||||||||||||   |      |||| |   || ||  ||| || ||||||||||||||||||||||||| ||||||||    
T  36074474 ttgcccaacaagccaaaaaatcgtgtcacgattggacgcccagaaaaccagctctcgacattaccaaaatcgtgtcacgatttctctgcttaccaacttt 36074573  T
Q  304 gctatttgaagacatacataacaa 327  Q
    || ||||||||||||||| |||||    
T  36074574 gcaatttgaagacatacacaacaa 36074597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 42426465 - 42426717
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42426465 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctcttttcaagctctccttcaaaatctgcaaagaacactta 42426564  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || |||||||| |||||||| ||||||| ||||||| || | ||| ||||||||| ||||||||| |||||||||||||||||||     
T  42426565 tatagcagtcttcagctgtcaaaattgtgtcacg-ttttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa- 42426662  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||||||||| || ||||| |||||||| ||| ||||||||||||||||||||    
T  42426663 cttgcccagcaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattg 42426717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 32636762 - 32636509
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32636762 agaactctaatcaaagacccttaaccctaaagttacctcctttgatttctcaagtttctctctctccaagctctccttcaaaatctgcaaagaacactta 32636663  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  || ||| || ||||||||| ||||||| ||||||| ||||||| |||| ||| |||||| || ||||||||| |||||||||||||||||||     
T  32636662 tatagcagttttcagctgtcaaaatcatgtcacg-ttttcccaaatcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcctgaaaaa 32636564  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||    
T  32636563 cttgcccagcaagtcgaaaatcgtgccacgttttcccaaaatcgtgtcacgattg 32636509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 267
Target Start/End: Complemental strand, 37439064 - 37438831
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgcgtcaaa 135  Q
    |||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  | |||||    
T  37439064 aaccctaaagttacctcatttgattttccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcaacatcaaa 37438965  T
Q  136 atcgtgtcacgtttttcc--ccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaat 233  Q
    || |||||||||||||    ||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||| ||||||||||||    
T  37438964 attgtgtcacgtttttttttccaatcgtgtcacgattgatgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaat 37438865  T
Q  234 cgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||| ||| |||||||| |||||||||||    
T  37438864 cgtgtcacgttttcccaaaatcatgtcacgattg 37438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 13239690 - 13239438
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||| ||||||| | ||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  13239690 agaactctaatcaaagaccctcaaccataaagttacctcctttgattttctaagtttctctctcttcaaactctacttcaaaatctgcaaagaacactta 13239591  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| |||||||||| |||||||||||| |  |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||      
T  13239590 tatagcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-c 13239492  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||| |||||||| |||| ||||||||||| ||  |||||||| |||||||||||    
T  13239491 ttgtccagcaagtcaaagatcgtgtcacgtttacccaaaatcttgtcacgattg 13239438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 13488141 - 13487891
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13488141 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttctagctctccttcaaaatctgcaaaaaacactta 13488042  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||   |||||| || |||||||| |||||||| ||||||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||     
T  13488041 tataacagtcttcagctgtcaaaattgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa- 13487944  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||||| |||||||||    | ||| ||||||||||||||||||||    
T  13487943 cttgcccagcaagccgaaaatcgtg--ctgttttcccaaaatcgtgtcacgattg 13487891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 30683150 - 30683390
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30683150 agaactctaatcaaagaccctcaaccctaaaattacctcctctgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 30683249  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  || ||| ||||||||||||||||||||||| ||  ||| ||| |||||||||||||||||            |||||||||||||||||||      
T  30683250 tatagcagttttcagcgtcaaaatcgtgtcacgttttcccaaaattgtgtcacgattgatgcgtacg------------accaaccttatcctgaaaa-c 30683336  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||| |||||| | |||||||||||||| ||| ||||||| ||||||||||||    
T  30683337 ttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 30683390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 42428660 - 42428900
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  | ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42428660 agaactctaatcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacattta 42428759  T
Q  114 tatagttgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| |  ||||||||||||||| | ||||||  ||||||| |||| ||| ||||||||            |||||||||||||| ||||     
T  42428760 tatagcagtcttcagttgtcaaaatcgtgtca-ggttttcctaaatcgtgacacgtttggtgcgtacg------------accaaccttatcct-aaaaa 42428845  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42428846 cttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 42428900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 19806294 - 19806114
Alignment:
Q  64 caagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| || ||||||||||||||||| ||||||| | |||||    
T  19806294 caagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaagtcgtg 19806196  T
Q  163 ccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     |||| ||| ||||||||| ||||||||| |||||||||||||| ||||   |||| |||||||| |||||||||||||||||    
T  19806195 acacgtttggtgcgtacgacccaaggtacgaccaaccttatcct-aaaaacgtgcctagcaagccgaaaatcgtgtcacgatt 19806114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 533707 - 533489
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |  |||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  533707 agaactctaatcaaagacccccaaccctaaagttacctcctttgatttcccaaatttctctctcttcaacctctccttcaaaatctgcaaaaaacactta 533608  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||            |||||||||||||||||||     
T  533607 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacg------------accaaccttatcctgaaaa- 533522  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     |||||||||||||| |||| ||||||||||||    
T  533521 cttgcccagcaagccgaaaaccgtgtcacgatt 533489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 14520504 - 14520689
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  14520504 caaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatataggagtc 14520602  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | | || |||||||||||||||||||||  || ||||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  14520603 tccagctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 14520689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 28750885 - 28751023
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactt 112  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  28750885 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctctttcaaaatctgcataagaacactt 28750984  T
Q  113 atatagttgtcttctgc-gtcaaaatcgtgtcacgtttt 150  Q
    ||||||  | |||| || |||||||||||||||||||||    
T  28750985 atatagcagacttcagctgtcaaaatcgtgtcacgtttt 28751023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 12083999 - 12083815
Alignment:
Q  26 aaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtct 124  Q
    ||||||||| |||||||||||| | |||||||   ||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||  ||||    
T  12083999 aaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctcacttctagctctccttcaaaatctgcacaagaacacttatatagcagtct 12083901  T
Q  125 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||  | |||||||| ||||||||||||  || ||||||| |||||||| ||| ||||| ||||||||| |||||||||||||||||||    
T  12083900 tcaactgtcaaaattgtgtcacgtttt--ccaaatcgtgacacgattggtgcatacgacccaaggtacgaccaaccttatcctgaaaa 12083815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 16649857 - 16650044
Alignment:
Q  19 tctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatata 117  Q
    |||||||||||||  | |||||||||||| | ||||||||||||||||||||  ||||||| || || || |||||||||||||||| ||||||||||||    
T  16649857 tctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaacctatcattcaaaatctgcaaagaaacacttatata 16649956  T
Q  118 gttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcc 205  Q
    || |||||  || ||||||||| ||||||  |||| || ||||||| |||| ||| ||||||||||||||||||| |||||||||||||    
T  16649957 gtagtctttagctgtcaaaatcatgtcac-attttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 11916795 - 11916553
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||| ||| |||||||||||| | |||||||   ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  ||     
T  11916795 caaagaaactcaaccctaaagttacctcctttgtaatcc-aagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtt 11916697  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    |||  | ||||||||||||||||| ||||| | |||||||  ||||||| ||||||||| ||||||||| |||||||| ||||||||||   | |||| |    
T  11916696 ttcaactgtcaaaatcgtgtcacg-ttttctcaaatcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaa-catacccaac 11916599  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||||||| ||||||||    
T  11916598 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 11916553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 25412439 - 25412358
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaatt 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  25412439 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaacaatt 25412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 39468779 - 39468862
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaat 97  Q
    ||||||||||| |||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  39468779 agaactctaatgaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaat 39468862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 5057650 - 5057517
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||||||| ||| ||| ||| |||| ||||||||||||| | ||||||| |||||||||||||||||||  |||| || |||| | |||    
T  5057650 caaaatcgtgtcacgtttt-cccaaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaa-cttgctcaacaagtcgaaa 5057553  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    || |||||||| ||| ||||||||||||||||||||    
T  5057552 attgtgtcacgttttaccaaaatcgtgtcacgattg 5057517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 9353155 - 9352972
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||  ||||||  ||||||||||| ||||||||||| |||   |||    
T  9353155 caaagacacttaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcatcctctcc--caaaatctgcacaagaacacttaaataccagtc 9353059  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  ||||||||| ||||||||  || ||||||||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  9353058 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaa 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 9789451 - 9789546
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  9789451 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttc-aaatctgcacaagaacactta 9789546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 16409416 - 16409321
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||||    
T  16409416 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 16409321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 18441875 - 18441970
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  18441875 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttc-aaatctgcacaagaacactta 18441970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 13342737 - 13342658
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| | ||||||||||||||| |||||    
T  13342737 ccaaaatcgtgtcacgattggcaaatcatgtcacgatttctctgcttcccagctttacaatttgaagacatacacaacaa 13342658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 130 - 267
Target Start/End: Original strand, 16650969 - 16651104
Alignment:
Q  130 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaa 229  Q
    |||||||||||||||| |||| ||  ||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||   | |||| ||||  |     
T  16650969 gtcaaaatcgtgtcacattttgcca-aatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaa-cgtacccaacaagttat 16651066  T
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||| ||| |||||||||||||| |||||    
T  16651067 aaatcgtgtcacgttttcccaaaatcgtgtcatgattg 16651104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 26170712 - 26170620
Alignment:
Q  21 taatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    ||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||||    
T  26170712 taatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 26170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 26177824 - 26177729
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgc-aaagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||| | |||| |||||||||||||  |||||||||||    
T  26177824 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcgcaagaacactta 26177729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 36932170 - 36931987
Alignment:
Q  26 aaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtct 124  Q
    ||||||||| |||||||||||| | |||||||   ||| ||||||||||||||||| |||||||| ||||| ||||| ||||||||||| |||   ||||    
T  36932170 aaagacactcaaccctaaagttccctcctttgcaatcc-aagtttctctctcttca-gctctcctccaaaaactgcacaagaacacttaaataccagtct 36932073  T
Q  125 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    || || |  ||||||||| |||| |||||   ||| ||| |||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  36932072 tcagctgataaaatcgtgccacgattttca--aattgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 36931987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 29720307 - 29720228
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaa 95  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  29720307 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttccaactctccttcaaa 29720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 29722467 - 29722370
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||| ||| | ||||||||| ||||||||| |||||||||||    
T  29722467 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctcttttccaactctccttc-aaatctgcacaagaacactta 29722370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 13239409 - 13239328
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaatt 329  Q
    ||||||||||| |||| || ||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||| |||||||    
T  13239409 ccaaaatcgtgacacgcttaccaaatcgtgtcacgatttatctgtttcccaactttgcaatttgaaaacatacaaaacaatt 13239328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 27015133 - 27015022
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||   |||||| |||||  |||    
T  27015133 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catgcccaacaagctgaaa 27015036  T
Q  232 atcgtgtcacgatt 245  Q
    ||||||||||||||    
T  27015035 atcgtgtcacgatt 27015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 11181655 - 11181564
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatata 117  Q
    |||||||||| |||| ||||||| | ||||||| |   ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  11181655 caaagacactcaaccataaagttacctcctttg-taaaccaagtttctctctcttcaagctctacttcaaaaactgcaaagaacacttatata 11181564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 15464808 - 15464963
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | | ||||| |   |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| | |||    
T  15464808 caaagacactcaaccctaaagtttccttctttg-taatccaagtttctctctcttcaagctctcctccaaaatctgcacaagaacacttaaatactagtc 15464906  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 181  Q
    |||| | |  ||||||||| |||| |||  || ||||||| |||||||||| |||||||    
T  15464907 ttctactgataaaatcgtgccacgattt--ccaaatcgtgtcacgattgatacgtacga 15464963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 29751385 - 29751464
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaa 95  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||| ||||||||||| | ||||||||||||    
T  29751385 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttccaactctccttcaaa 29751464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 267
Target Start/End: Complemental strand, 31004868 - 31004735
Alignment:
Q  133 aaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaa 232  Q
    |||| |||||||||||| |||  ||||||| |||||||| ||||||||| |||| ||||||||||||||||||| ||||   |||||||||||   || |    
T  31004868 aaaaacgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaagttgaata 31004770  T
Q  233 tcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||| ||||| ||| ||| ||||||| ||||||||    
T  31004769 tcgtatcacgttttcccacaatcgtgacacgattg 31004735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 535699 - 535613
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacga 243  Q
    ||||||| |||| ||| ||| ||||| ||||||||| |||||||||||||||||||  ||| |||||||||| |||||||||||||||    
T  535699 aatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacga 535613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 38746534 - 38746456
Alignment:
Q  188 gtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||| ||||||||||||||||||| || | |||||||||| |||||||||||||| ||||||||||  ||||||||||||    
T  38746534 gtacgaccaaccttatcctgaaaactt-gtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacgattg 38746456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 537963 - 537901
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctct 76  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||| ||||||||||||||    
T  537963 agaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctctct 537901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 16452019 - 16451937
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaa 96  Q
    |||||||||||||||||  || |||||||||||| | ||||||||||||||||||||  ||||||| ||||||| | ||||||    
T  16452019 agaactctaatcaaagatcctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagctcttcctcaaaa 16451937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 31182911 - 31182837
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  31182911 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 31182837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 42310165 - 42310227
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctct 76  Q
    ||||| ||||||||||||  |||||||||||||| | ||||||||||||||||||||||||||    
T  42310165 agaaccctaatcaaagaccataaaccctaaagttacctcctttgatttcccaagtttctctct 42310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 42926831 - 42926745
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctg 100  Q
    ||||||||||||||||||  | || ||||||||| | || ||||||||||||||||| |||||||| |||||||| | |||||||||    
T  42926831 agaactctaatcaaagaccatcaatcctaaagttacctcatttgatttcccaagtttttctctcttgaagctctcatccaaaatctg 42926745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 17003745 - 17003688
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  17003745 ccaagtttctctctctcaaagctctccttcaaaatctgcaaagaaacacttatatagt 17003688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 30683419 - 30683492
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacataca 321  Q
    ||||||||||| |||| ||| ||||| ||||||||||||||||| || | |||||||| |||||||||||||||    
T  30683419 ccaaaatcgtgacacgcttgtcaaattgtgtcacgatttctctgttttctaactttgcaatttgaagacataca 30683492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 535760 - 535685
Alignment:
Q  75 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgttt 149  Q
    |||||||| |||||||||||||||||||||||||| |||||||   |||||| || |||||||||||| |||||||    
T  535760 ctcttcaacctctccttcaaaatctgcaaagaacaattatatatcagtcttcagctgtcaaaatcgtgacacgttt 535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 5887646 - 5887720
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    ||||||||||||||| || || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  5887646 agaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 5887720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 3075888 - 3075953
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    |||||| ||||||||||| || |||||||||||| | ||||||||||||| ||||||  |||||||    
T  3075888 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagttttactctctt 3075953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 39468912 - 39468992
Alignment:
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    |||| ||| ||| ||||| ||||||||| |||||||||||||| ||||   || |||||||||| |||||||||||||||||    
T  39468912 cacgtttggtgcatacgacccaaggtacgaccaaccttatcct-aaaaacgtgtccagcaagccgaaaatcgtgtcacgatt 39468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 9049591 - 9049655
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc 84  Q
    ||||||||||||  | ||||||||||||   |||||||||||| |||||||||||||||| ||||    
T  9049591 ctaatcaaagactttcaaccctaaagttatctcctttgatttctcaagtttctctctcttgaagc 9049655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 10593201 - 10593091
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc-cttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| | |||||||||| |||| |  ||||||||||||||||| ||||||||||| | ||||| |||| ||||||||| |||||||||||    
T  10593201 actctaatcaaagaaccctaaaccctagagttccc-cctttgatttcccaagtctctctctcttccaactctctcttc-aaatctgcacaagaacactta 10593104  T
Q  114 tatagttgtcttc 126  Q
     ||| | ||||||    
T  10593103 catactagtcttc 10593091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 15045203 - 15045243
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  15045203 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 15045243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 33831618 - 33831562
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    |||||||||||||||||| || ||||||||| ||   ||||||||||||||||||||    
T  33831618 agaactctaatcaaagacccttaaccctaaaattaactcctttgatttcccaagttt 33831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 30631804 - 30631839
Alignment:
Q  231 aatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||| |||||||||||||||||||    
T  30631804 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 30631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 31300418 - 31300324
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||| ||||||| | |||||||   ||| ||||||||||||||  || |||| ||||||||||||||||| ||| ||||||||||    
T  31300418 caaagacactcaaccttaaagttacctcctttgcaatcc-aagtttctctctctaaaacctcttcttcaaaatctgcaaagaaacccttatatagt 31300324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 213068 - 213030
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  213068 aaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 213030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 16407946 - 16407897
Alignment:
Q  52 cctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca 102  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||||||||    
T  16407946 cctttgattttccaagtttctctctcttccaactct-cttcaaaatctgca 16407897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 22536512 - 22536574
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctct 78  Q
    |||||||||||||| | |||||||||| || | || ||||||||||||||||| |||||||||    
T  22536512 actctaatcaaagaaccctaaaccctagagcttctccctttgatttcccaagtctctctctct 22536574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 31396564 - 31396526
Alignment:
Q  253 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  31396564 atcgtgtcacgattgccaaatcgtgacacgattcctctg 31396526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 37556199 - 37556161
Alignment:
Q  253 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  37556199 atcgtgtcacgattaccaaatcgtgtcacgattactctg 37556161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 24136337 - 24136374
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  24136337 aaaatcgtgtcacgatttcccaagatcgtgtcacgatt 24136374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Complemental strand, 31401421 - 31401384
Alignment:
Q  253 atcgtgtcacgattgccaaatcgtgtcacgatttctct 290  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  31401421 atcgtgtcacgattgccaaatcgtgacacgattcctct 31401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 1456714 - 1456674
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  1456714 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 1456674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 9789663 - 9789699
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  9789663 aaatcgtgtcacgatttcccacaatcgtgtcacgatt 9789699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 10282028 - 10282080
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||||||||| | |||||||  ||| ||||||||||||||    
T  10282028 caaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctc 10282080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 16544137 - 16544105
Alignment:
Q  232 atcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||||||||||||||| ||||||||||||||    
T  16544137 atcgtgtcacgattttcccaaatcgtgtcacga 16544105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 16546359 - 16546327
Alignment:
Q  232 atcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||||||||||||||| ||||||||||||||    
T  16546359 atcgtgtcacgattttcccaaatcgtgtcacga 16546327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 18442087 - 18442123
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  18442087 aaatcgtgtcacgatttcccacaatcgtgtcacgatt 18442123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 24553350 - 24553255
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttc-aaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||| ||||| | |||||||   ||| |||||||| |||||  ||| |||||||| ||||||||||||| ||||||||||||||    
T  24553350 caaagacactcaacccttaagttacctcctttgtaatcc-aagtttctttctctaaaagttctccttcaaaaatctgcaaagaaacacttatatagt 24553255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 27445490 - 27445530
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  27445490 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 27445530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 27450333 - 27450373
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  27450333 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 27450373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 30631872 - 30631912
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  30631872 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 30631912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 35388057 - 35388093
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgattt 286  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  35388057 aaaatcgtgtcacgatttccagatcgtgtcacgattt 35388093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 38746606 - 38746535
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatc 204  Q
    ||||||||||||| | ||| ||| ||| ||| |||| ||| ||||||||| ||||||||| ||||||||||||    
T  38746606 caaaatcgtgtcatgattt-cccaaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 40379821 - 40379789
Alignment:
Q  232 atcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||||||||||||||| ||||||||||||||    
T  40379821 atcgtgtcacgattttcccaaatcgtgtcacga 40379789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 40382032 - 40382000
Alignment:
Q  232 atcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||||||||||||||| ||||||||||||||    
T  40382032 atcgtgtcacgattttcccaaatcgtgtcacga 40382000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 42310310 - 42310354
Alignment:
Q  160 gtgccacgattgatgcgtacgatccaaggtacaaccaaccttatc 204  Q
    ||| ||| |||||||||||| ||||||| ||||||||||||||||    
T  42310310 gtgtcacaattgatgcgtacaatccaagatacaaccaaccttatc 42310354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 5258374 - 5258627
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  5258374 agaactctaatcaaagaccctaaaccctaaagtttctccctttgatttctcaagtttctctctcttctagctctccttcaaaatctgcaaagaacacgta 5258473  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||||||||     
T  5258474 tatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatc 5258573  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5258574 ttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 5258627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 5260553 - 5260874
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5260553 agaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacactta 5260652  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||     
T  5260653 tatagctgtcttctgcgtcaaaatcgtgtcatgtttttccccaatcgtgccacaattgatgcgtacgatccaaagtacgaccaaccttatcctgaaaatc 5260752  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttcc------aaaatcgtgtcacga--ttgccaaa-tcgtgtcacgatttctctgcttcccaactttg 304  Q
    ||||||| ||||||||||||||||||||||||   |      |||| |   || |||  || ||||| | ||||||||||||||||||||||||||||||    
T  5260753 ttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatttctctgcttcccaactttg 5260852  T
Q  305 ctatttgaagacatacataaca 326  Q
    | ||||||||||||||| ||||    
T  5260853 caatttgaagacatacacaaca 5260874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 9636360 - 9636611
Alignment:
Q  17 actctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc-cttcaaaatctgcaaagaacacttata 115  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||||    
T  9636360 actctaatcaaagaccctaaaccctaaagtttcttcctttgatttcccaagtttctctctcttccaactcactcttcaaaatctgcaaagaacacttata 9636459  T
Q  116 tagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatttt 215  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  9636460 tagctgccttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatctt 9636559  T
Q  216 gcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | ||| ||||||||||||||||||| ||||| |||||||| |||||||||||    
T  9636560 gtccatcaagccaaaaatcgtgtcatgatttcccaaaatcatgtcacgattg 9636611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 45095103 - 45094849
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  45095103 agaactctaatcaaagaccctaaaccctaaagttgcctcttttgatttcccaagtttctctctcttcaagctcatcttcaaaatctgcaaagaacactta 45095004  T
Q  114 tatagttgtcttctgcgt-caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||   ||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  45095003 tatagcaatcttcagcgttcgaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaat 45094904  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  45094903 cttgcccaacaagccaaaaatcgtgtcacgatttcccaaaattgtgtcacgattg 45094849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 7762204 - 7761950
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctct--tcaagctctccttcaaaatctgcaaagaacact 111  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||    
T  7762204 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctctcttcaagctttccttcaaaatttgcaaagaacact 7762105  T
Q  112 tatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||||||  |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||    
T  7762104 tatatagcagtcttcagcgtctaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 7762005  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7762004 tcttgcccagcaagccaaaaatcgtgtcacg-tttcccaaaatcgtgtcacgattg 7761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 29813001 - 29812749
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  29813001 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctcttcttcaaaatctacaaagaacactta 29812902  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || |||||||||||||||||||||| || ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||     
T  29812901 tatagcagtcttcagcggtcaaaatcgtgtcacgttttt-ccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa- 29812804  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  29812803 cttgcccagcaagacaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 29812749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 7764406 - 7764137
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaa----------------gctctccttcaaaat 97  Q
    |||| ||||||||||||| || ||| |||||||| | ||||||||||||||||||||||||||||||||                |||||||||||||||    
T  7764406 agaaatctaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctctctcttcaactctaatgtttacaatgctctccttcaaaat 7764307  T
Q  98 ctgcaaagaacacttatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaa 197  Q
     ||||||||||||||||||||  |||||| || || |||||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||    
T  7764306 ttgcaaagaacacttatatagcagtcttcagcatctaaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacgacccaaggtacgaccaa 7764207  T
Q  198 ccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7764206 ccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 7764137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 40734436 - 40734182
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40734436 agaactctaatcaaagaccctcaaccctaaagttatctcctttgattttccaagtttctgtctcttcaagctctccttcaaaatctgcaaagaacactta 40734337  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || |||||||| ||||||||||| | || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||     
T  40734336 tatagcagtcttcagctgtcaaaattgtgtcacgtttgt-ccaaatcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaaa 40734238  T
Q  213 tttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | |  ||| ||||    |||||||||||||| ||| ||||||||||| ||||||||    
T  40734237 tgtagccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 40734182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 29810806 - 29810554
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||||||| || | |||||||||||||||||||| ||| ||||||| || | ||||||||| |||||||||||||||    
T  29810806 agaactctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttttctttcttcaaccttttcttcaaaatatgcaaagaacactta 29810707  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||     
T  29810706 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa- 29810609  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||| |||||||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  29810608 tttgtccagcaagccaaaaattgtgctacgtttttctaaaatcgtgtcacgattg 29810554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 5236686 - 5236939
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactt 112  Q
    |||||||||||||||||| || |||||||||||| | ||||| |||||||||||||||||||||||||||| |  |||||||||||||| ||||||||||    
T  5236686 agaactctaatcaaagaccctcaaccctaaagttacctccttcgatttcccaagtttctctctcttcaagccccacttcaaaatctgcacaagaacactt 5236785  T
Q  113 atatagttgtcttct-gcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | |||||   || |  | ||||||||||||||||||||| ||  ||||||| |||| ||| ||||||||| ||||||||| ||||| |||||||||||||    
T  5236786 aaatagtaccctgcaagtgtcaaaatcgtgtcacgttttgcca-aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaa 5236884  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||| ||||||||||| |||||||||||||| ||| ||||||| ||||||||||||    
T  5236885 cttt-cccagcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 5236939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 40592594 - 40592353
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||  |||    
T  40592594 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctcattcaaaatctgcacaagaacacttatatagcggtc 40592496  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||| |||  ||||||| |||||||| || |||||||||||||||| |||||||||||||||||||   || |||||    
T  40592495 ttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaa-cgtgtccagc 40592398  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||||| ||| ||||||||||| ||||||||    
T  40592397 aagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 40592353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 37408397 - 37408200
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactt 112  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  37408397 agaactctaatcaaagaccataaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatcttcacaagaacactt 37408298  T
Q  113 atatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||||   |||||| || |  |||||| ||| ||| |||  || |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  37408297 atataccagtcttcagcagataaaatcttgttacgattt--ccaaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 48438489 - 48438675
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||  |||    
T  48438489 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctattcaagctctccttcaaaatttgcacaagaacacttatatagcagtc 48438587  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || || ||||||||||||||||| |||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  48438588 ttcggctgttaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgatccaaggtacaaccaaccttatcctgaaaa 48438675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 27026980 - 27027222
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||| |||||||||||||||| |||||||||||||| ||||  ||||||||||  |||    
T  27026980 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttttctctcttcaagctcttcttcaaaatctgcacaagattacttatatagcagtc 27027078  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||||  || || |||| |||||||| ||||||||| ||||||||| ||||||||||||||||||| | |  |||||    
T  27027079 ttcagctgtcaaaatcgtgtcacgtttt--ccaaaacgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagc 27027176  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||||||| ||||||||    
T  27027177 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 27027222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 51398750 - 51398585
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttata 115  Q
    |||||||||||||||| || |||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  51398750 aactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagtttctatctcttcaacctctccttcaaaatctacaaagaacacttata 51398651  T
Q  116 tagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 181  Q
    |||   ||||| || ||||||||||||||||  ||||||| ||||||| |||| ||| |||||||||    
T  51398650 tagcaatcttcagctgtcaaaatcgtgtcac-attttcccaaatcgtgacacgtttggtgcgtacga 51398585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 47923716 - 47923473
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| || ||||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||   ||    
T  47923716 caaagacactcaatcctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcactc 47923618  T
Q  124 ttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| |  |||||||||||||||||||| | || ||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||   | ||||||    
T  47923617 ttcagttgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctgaaaaacgtacccagc 47923519  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||  ||| ||||||||    
T  47923518 aagtttgaaaatcgtgtcacgttttcccaaaaatgtgacacgattg 47923473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 266
Target Start/End: Original strand, 36029367 - 36029608
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| ||||||||| || | |||||||   ||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||  |||    
T  36029367 caaagacactcaaccctaaatttacctcctttgtaatcc-aagtttctcttacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 36029465  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||| ||||||||||||||   || |||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   | ||||||    
T  36029466 ttcagctgtcaaaattgtgtcacgtttttcta-aaccgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccagc 36029563  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||    |||||||||||||| ||||||||||||||| |||||||    
T  36029564 aagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgatt 36029608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 30709572 - 30709366
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||  |||||| || |||||||||||||||||||||| || |||||    
T  30709572 ccaagtttctgtctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttt-ccaaatcg 30709474  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgt 259  Q
    || |||||||| ||||||||| ||||||||  ||||| |||||||||||||   | |||||||||    ||||| |||||||| |||  ||||||||||     
T  30709473 tgacacgattggtgcgtacgacccaaggtaagaccaatcttatcctgaaaaacgtacccagcaagtttgaaaattgtgtcacgttttctcaaaatcgtga 30709374  T
Q  260 cacgattg 267  Q
    ||||||||    
T  30709373 cacgattg 30709366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 8370301 - 8370060
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||  |||    
T  8370301 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctcttcttcaaaatctgcacaagaacgcttatatagcagtc 8370203  T
Q  124 ttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| |  |||||||||||||||||||||  || ||||||| |||||||| ||||||| | ||||||||| |||||||||||||| ||||  || ||||||    
T  8370202 ttcagttgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaacgtt-cccagc 8370106  T
Q  223 aa-gccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||     |||||||||||||| ||| ||||||||||| ||||||||    
T  8370105 aattttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 8370060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 1736116 - 1735929
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||  |||    
T  1736116 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctctccaaactctccttcaaaatctgcataagaacacttatatagcagtc 1736018  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||| || |||||||||||||||||||| |||  ||||||| |||||||| ||||||| | ||||||||| |||||||||||||| |||||    
T  1736017 ttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaat 1735929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 3393404 - 3393292
Alignment:
Q  154 ccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaa 253  Q
    |||||| |||||||||||||| ||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  3393404 ccaatcatgccacgattgatgtgtacgatcctaggtacgaccaac-ttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaa 3393306  T
Q  254 tcgtgtcacgattg 267  Q
    ||||||||||||||    
T  3393305 tcgtgtcacgattg 3393292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 16264623 - 16264864
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||  |||    
T  16264623 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctcttacttcaagctctccttcaaaaactgcacaagaacacttatatagcagtc 16264721  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || ||||||||||||||||| |||  || ||||||| |||||||| ||||||| | ||||||||| |||||||||||||||||||   | ||||||    
T  16264722 ttcagctgtcaaaatcgtgtcacgcttt--ccaaatcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcctgaaaa-cgtacccagc 16264818  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||    |||||||||||||| ||| ||||||||||| ||||||||    
T  16264819 tagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 16264864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 39032367 - 39032126
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||   ||    
T  39032367 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctacttcaaaaactgcacaagaacacttatatagcaatc 39032269  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || ||||||||||||||||| |||||   ||||||| |||||||| ||||||||| ||||||||| |||||| ||||||||||||   | ||||||    
T  39032268 ttcagctgtcaaaatcgtgtcacgattttca--aatcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcctgaaaa-cgtacccagc 39032172  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||  ||| ||||||||||| ||||||||    
T  39032171 aagtttgaaaatcgtgtcacattttcccaaaatcgtgacacgattg 39032126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 24694978 - 24694792
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||    
T  24694978 caaagacactcaaccctaaagttacctcctttgtaatccaaa-tttctctctcttcaagctcttcttcaaaatctgcacaagaacacttatatagcagtc 24694880  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| |  ||||||||||||| |||||| |||  ||||||| |||||||| ||||||| | ||||||||| |||||||||||||||||||    
T  24694879 ttcagttgtcaaaatcgtgttacgtttgtcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaa 24694792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 36 - 267
Target Start/End: Complemental strand, 44331471 - 44331255
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgc-gtcaa 134  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||  |||||| || |||||    
T  44331471 aaccctaaagttacctcctttgatttcccaagtttctctctc-tcaagctctccttc-aaatctacaaagaacatttatatagcagtcttcagctgtcaa 44331374  T
Q  135 aatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatc 234  Q
    |||| ||||||||             || || | ||| ||||||||| ||||||||| |||||||||||||||||||   | ||||||||||||||||||    
T  44331373 aatcatgtcacgt-------------tgacaagtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccagcaagccaaaaatc 44331288  T
Q  235 gtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||  ||| ||||||||||||||||||||    
T  44331287 gtgtcactttttcccaaaatcgtgtcacgattg 44331255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 27974764 - 27974576
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||   |||    
T  27974764 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatataacagtc 27974666  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattt 214  Q
    ||| || |  ||||||||| |||  |||  || |||| || |||||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  27974665 ttcagctgataaaatcgtgccacaattt--ccaaatcatgtcacgattgatacgtacgacccaaggtacaaccaaccttatcatgaaaattt 27974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 267
Target Start/End: Original strand, 44331735 - 44331929
Alignment:
Q  72 tctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgatt 170  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||||  |||||| || ||||||||| || |||||||  ||| ||||||| |||  ||    
T  44331735 tctctctttaagctctccttcaaaatctgcaaataacacatatatagcagtcttcagctgtcaaaatcatgccacgtttc-cccaaatcgtgacacattt 44331833  T
Q  171 gatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | || |||||| ||||||||| || ||| ||||| ||||||  |  ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  44331834 ggtgtgtacgacccaaggtacgactaactttatcttgaaaacgta-cccaggaagccaaaaatcgtgtcacgtttttccaaaatcgtgtcacgattg 44331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 4569552 - 4569419
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||||||| || ||| |||| |||| ||| ||||||||| ||||||||| ||||||||||||||||||| || |||||||||||| |||    
T  4569552 caaaatcgtgtcacgtttt-ccacaaccgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactt-gcccagcaagccgaaa 4569455  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| |||||||| |||||||||||    
T  4569454 atcgtgtcacgttttcccaaaatcatgtcacgattg 4569419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 43402373 - 43402490
Alignment:
Q  149 tttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttc 248  Q
    |||||| ||||||| |||| ||| ||||||||| ||||| ||||||||||||||||||||||| || |||||||||||| |||||||||||||| || ||    
T  43402373 tttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaactt-gcccagcaagccgaaaatcgtgtcacgtttctc 43402471  T
Q  249 caaaatcgtgtcacgattg 267  Q
    |||||||||||||||||||    
T  43402472 caaaatcgtgtcacgattg 43402490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 34490810 - 34490700
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||  |||||||  ||||| |||||||||||||| ||||||||||||    
T  34490810 aatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cttgcccaataagccgaaaatcgtgtcacgtttttccaaaatc 34490712  T
Q  256 gtgtcacgattg 267  Q
    ||||||||||||    
T  34490711 gtgtcacgattg 34490700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 9634816 - 9634891
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  9634816 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccatctttgcaatttgaagacatacacaaca 9634891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 55302532 - 55302664
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    |||||| |||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||  |||||||||||||| |||    
T  55302532 caaaattgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaa 55302629  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||| ||||| |||||| |||||||||||||||||    
T  55302630 atcgtatcacg-ttttcccaaatcgtgtcacgattg 55302664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 8126941 - 8127145
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgcaaa-gaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    ||||||||||||||||  || |||||||||||||||||||||  |||||||||||||  ||||||  | |||||||||||||||||||| | || |||||    
T  8126941 ccaagtttctctctctaaaaactctccttcaaaatctgcaaataaacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgt-ccaaatcg 8127039  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtc 260  Q
    || |||| ||| || |||||| ||||| ||| |||||||||||||||||||   | || ||||||   |||||||||||||  ||| ||||||||||| |    
T  8127040 tgacacggttggtgtgtacgacccaagatacgaccaaccttatcctgaaaa-cgtacctagcaagttgaaaatcgtgtcacactttcccaaaatcgtgac 8127138  T
Q  261 acgattg 267  Q
    |||||||    
T  8127139 acgattg 8127145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 133 - 267
Target Start/End: Original strand, 43404301 - 43404433
Alignment:
Q  133 aaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaa 232  Q
    |||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| ||| |||||||||||||||  |||| ||||||||| ||||    
T  43404301 aaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaa-cttgctcagcaagccgaaaa 43404398  T
Q  233 tcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||| ||  ||||||||||||||||||||    
T  43404399 tcgtgtcacgtttccccaaaatcgtgtcacgattg 43404433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 37725949 - 37726134
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||| | | ||||||||||| ||||||||||||||||  ||     
T  37725949 caaagacactcaaccctaaagtttcctcctttgtaatcc-aagtttctctctcttcaagctcacttccaaaatctgcacaagaacacttatatagcagtt 37726047  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | | || |  ||||||||| ||||||||  || ||||||| |||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  37726048 tgcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaa 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 7761921 - 7761842
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  7761921 ccaaaatagtgacacgcttgccaaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaacaa 7761842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 23198170 - 23198280
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttat 114  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||||||| | |||| |||||||||||||| |||||||||||     
T  23198170 aactctaatcaaagaccctaaaccctagagttgctccctttgattttccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacacttaa 23198268  T
Q  115 atagttgtcttc 126  Q
    ||| | ||||||    
T  23198269 atactagtcttc 23198280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 3393262 - 3393184
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  3393262 ccaaaatcgtgtcgcgattgccaaatcgtgttacgatttctctgcttccgaactttgcaatttgaagacatacacaaca 3393184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 7764108 - 7764030
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  7764108 ccaaactcgtgacacgcttgccaaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaaca 7764030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 23200369 - 23200454
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca 102  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  23200369 aactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgca 23200454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 266
Target Start/End: Complemental strand, 33386487 - 33386247
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| ||||||||||||   ||||||| |   ||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||   |||    
T  33386487 caaagacactcaaccctaaagttctctcctttg-taatccaagtttctctctcttcaagctctactccaaaatctgcacaagaacacttaaataccagtc 33386389  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |  ||||||||| |||  |||  || ||||||| |||||||||| ||||||| ||||| ||| |||||||||||||||||||  ||  |||||    
T  33386388 ttcagctgataaaatcgtgccacaattt--ccaaatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaa-cttaaccagc 33386292  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||    |||||||||||||||||   ||||||||||||||||||    
T  33386291 aagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatt 33386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 211
Target Start/End: Original strand, 27038362 - 27038501
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    |||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||  |||||| || |||||||||||||||||||           |    
T  27038362 ccaagtttttctctcttcaagctcttcttcaaaatctacacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt-----------g 27038450  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    || |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  27038451 tggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 27038501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 31340608 - 31340743
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||| ||||||| ||| ||  ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||  ||||||| |||||| |||    
T  31340608 caaaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccaacaagccgaaa 31340706  T
Q  232 atcgtgtcacgatttt-ccaaaatcgtgtcacgattg 267  Q
    ||||||||| | |||| |||||||| |||||||||||    
T  31340707 atcgtgtcatgtttttcccaaaatcatgtcacgattg 31340743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 6096167 - 6096300
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||| | ||| ||| ||||||| |||  ||| ||||||||| ||||||||| ||||||||||||||||||| |||| |||  ||||| |||    
T  6096167 caaaatcgtgtcatgattt-cccaaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-tttgtccaataagccgaaa 6096264  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| ||||||||||||||| ||||    
T  6096265 atcgtgtcacgttttcccaaaatcgtgtcacaattg 6096300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 25929208 - 25929023
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||  ||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||||   ||    
T  25929208 caaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctcacttcaaactctacttcaaaatctacaaagaaacacttatatagaaatc 25929110  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaa 210  Q
    ||| || |||||||||||||||||  ||  || ||||||  |||| ||| | |||||||||||| |||| ||||||||||||||||||    
T  25929109 ttcagctgtcaaaatcgtgtcacg-attggccaaatcgtaacacggttggtacgtacgatccaatgtacgaccaaccttatcctgaaa 25929023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 40912938 - 40912805
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||| | ||| ||| ||||||| |||| ||| ||||||||||||||| ||| |||| |||||||| |||||  ||||||| |||||| |||    
T  40912938 caaaatcgtgtcatgattt-cccaaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaa-cttgcccaacaagccgaaa 40912841  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| ||||||| || |||||||||    
T  40912840 atcgtgtcacgttttcccaaaattgtatcacgattg 40912805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 49200041 - 49200151
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||  ||| ||||||||| ||||||||| |||||||||||||||||||  | |||||||||||| |||||||||||||| ||  |||| |||    
T  49200041 aatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacat-gcccagcaagccgaaaatcgtgtcacgtttccccaacatc 49200139  T
Q  256 gtgtcacgattg 267  Q
    ||||||||||||    
T  49200140 gtgtcacgattg 49200151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 32744656 - 32744730
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||| |||||||| ||||||||    
T  32744656 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctctc 32744730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 40735250 - 40735113
Alignment:
Q  130 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-cca 228  Q
    |||||||||||||||||||| |||  |||| |  |||||||| ||||||||| ||||||||| ||||||||||||||||||| | |  ||||||||        
T  40735250 gtcaaaatcgtgtcacgtttgtcca-aatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttg 40735152  T
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||||| ||| ||||||||||| ||||||||    
T  40735151 aaaatcgtgtcacgttttcccaaaatcgtgacacgattg 40735113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 255
Target Start/End: Original strand, 40844929 - 40845157
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||  |||||||||| |||| || |||||||||||||| |||| |||||||||||||  |  |||    
T  40844929 caaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctatcttaaaactctccttcaaaatttgcacaagaacacttata--gcagtc 40845025  T
Q  124 ttctgcg-tcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| ||  || |||| ||||||||||| |||  ||||||| |||||||| ||||||| | ||||||||| |||||||||||||| ||||   || |||||    
T  40845026 ttcagctatctaaattgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaaacgtgtccagc 40845124  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    | |   |||||||||||||| ||| ||||||||    
T  40845125 acgttgaaaatcgtgtcacgttttcccaaaatc 40845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 5258660 - 5258716
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  5258660 aaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaaca 5258716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 7782375 - 7782470
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| ||||| |||| |||| || ||||||||||||||||||||||||||||| | || |||||| ||||||||| |||||||||||    
T  7782375 ctctaatcaaagactctaaaacctagagttactccctttgatttcccaagtttctctctcttccaactgtccttc-aaatctgcacaagaacactta 7782470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 801032 - 800973
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  801032 ctctaatcaaagactctaaaccctagagtttcttcctttgatttcccaagtttctctctc 800973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 9636643 - 9636702
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaatt 329  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  9636643 aaatcgtgttacgatttctctgcttcccaactttgcaatttgaagacatacacaacaatt 9636702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 40735321 - 40735254
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttca 81  Q
    |||||| ||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||    
T  40735321 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 40735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 54593305 - 54593172
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||| | ||| ||| ||||||| |||| ||| ||||||||| |||| |||| |||||||||||||||||||   |||||||||||   |||    
T  54593305 caaaatcgtgtcatgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cgtgcccagcaagttgaaa 54593208  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| ||||||| | ||||||||||    
T  54593207 atcgtgtcacgttttcccaaaattgagtcacgattg 54593172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 27453235 - 27453416
Alignment:
Q  28 agacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttc 126  Q
    ||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||    
T  27453235 agacactcaaccctaaagttccctcctttgtaatcc-aagtttctctctcttcaagctct-cttcaaaaactgcacaagaacacttaaaaactagtcttc 27453332  T
Q  127 tgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
      | |  ||||||||| |||| |||  || ||||||| |||||||||| ||||||   |||||||| |||||||||||||||||||    
T  27453333 aactgataaaatcgtgccacgattt--ccaaatcgtgtcacgattgatacgtacgtcacaaggtacgaccaaccttatcctgaaaa 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 23410571 - 23410757
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttc-aaaatctgcaaag-aacacttatatagttgt 122  Q
    |||||||||| ||||||||||||   |||||||   |||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||  ||    
T  23410571 caaagacactcaaccctaaagttctctcctttgcaatcccaagtttctctctcttc-agctctccttcaaaaaactgcaaagaaacacttatatagcagt 23410669  T
Q  123 cttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||| || ||| |||| |||||||| |||| || ||||||| |||| ||| || | || | ||||||||| ||||| |||||| ||||||    
T  23410670 cttcagctgtc-aaattgtgtcacg-ttttgccaaatcgtgacacggttggtgtgaacaacccaaggtacgaccaaacttatcttgaaaa 23410757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 35925791 - 35925880
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttt 150  Q
    ||||||||||||| ||| |||||| ||||||||| ||||| ||||||||||||||||  |||||| || |||||||||||||||||||||    
T  35925791 ccaagtttctctcactttaagctcaccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 35925880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 45094817 - 45094761
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  45094817 aaatcgtgtcacgatttctctgcttcccaactttgtaatttgaagacatacacaaca 45094761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 53921739 - 53921807
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||| || |||||||||||| | || ||||||||||||||||| |||||||||||||||||    
T  53921739 ctaatcaaagactctcaaccctaaagttacctcatttgatttcccaagtttttctctcttcaagctctc 53921807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 2075300 - 2075369
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc 84  Q
    |||||||||||||||||| || |||||||||||| || | |||||||||||||||||||||||||| ||||    
T  2075300 agaactctaatcaaagactctcaaccctaaagttact-catttgatttcccaagtttctctctcttgaagc 2075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 21711496 - 21711588
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatag 118  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  21711496 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctct-cttcaaaatctgcacaagaacacttacatag 21711588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 26386711 - 26386785
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  26386711 agaactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctctttaagttctc 26386785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 46173318 - 46173202
Alignment:
Q  149 tttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttc 248  Q
    |||||| | ||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||   |||||| ||||||   |||||||||| | ||| |    
T  46173318 tttcccaattcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagcc-ggaatcgtgtcatgttttcc 46173221  T
Q  249 caaaatcgtgtcacgattg 267  Q
    |||||||||||||||||||    
T  46173220 caaaatcgtgtcacgattg 46173202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 39153591 - 39153656
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||  |||||||    
T  39153591 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 39153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 29196637 - 29196705
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||||| ||||||||  |||||||    
T  29196637 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgtagctctc 29196705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 54635068 - 54635004
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 80  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  54635068 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttc 54635004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 6794523 - 6794433
Alignment:
Q  29 gacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||| |||||||||||| | |||||||   ||| ||||||||||||||  || |||||||||||||||||||||| ||||||||||||||    
T  6794523 gacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctctaaaacctctccttcaaaatctgcaaagaaacacttatatagt 6794433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 27986268 - 27986147
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | ||||||| |   |||||||||||||||||| | |||| |||| ||||||||| ||||||||||| |||  ||||    
T  27986268 caaagacactcaaccctaaagttccctcctttg-taatccaagtttctctctcttccaactct-cttccaaatctgcacaagaacacttaaatacctgtc 27986171  T
Q  124 ttctgc-gtcaaaatcgtgtcacg 146  Q
    |||||| | |||||||||||||||    
T  27986170 ttctgcggacaaaatcgtgtcacg 27986147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 36018408 - 36018330
Alignment:
Q  188 gtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||| |||||||||||||| ||||  | |||||||||||| ||||| |||||||| ||| ||||||||||||||||||||    
T  36018408 gtacgaccaaccttatcctaaaaacgt-gcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattg 36018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 44700728 - 44700795
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||||||||||  | |||||||||||| | |||||||||||||| |||||||||||||| |||||||    
T  44700728 ctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 44700795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 760785 - 760711
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  760785 agaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 760711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 9581221 - 9581147
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  9581221 agaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 9581147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 19684119 - 19684193
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  19684119 agaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 19684193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 22835232 - 22835306
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||| ||||||||  ||||||| ||| ||||    
T  22835232 agaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcctctcttgaagttctc 22835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 9666698 - 9666771
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || |||||||||||| | || ||||||||||| ||| |||||||||| |||||||    
T  9666698 agaaccctaatcaaagaccctcaaccctaaagttacctcatttgatttccctagtgtctctctcttgaagctct 9666771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 6716443 - 6716379
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 80  Q
    |||||||||||||| | |||||||||| |||| || ||||||||||||||||| |||||||||||    
T  6716443 actctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagtctctctctcttc 6716379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 6718627 - 6718563
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 80  Q
    |||||||||||||| | |||||||||| |||| || ||||||||||||||||| |||||||||||    
T  6718627 actctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagtctctctctcttc 6718563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 21711606 - 21711661
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||||||| |||||||| ||||||||| ||||||||| ||||||||||||| |||||    
T  21711606 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaa 21711661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 27986158 - 27986103
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||||||| |||||||||| ||||||| ||||| ||| |||||||||||||||||||    
T  27986158 aatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaa 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 23392151 - 23392244
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttc-aaaatctgcaaag-aacacttatata 117  Q
    |||||||||| ||||||||| ||   |||||||   |||||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  23392151 caaagacactcaaccctaaatttctctcctttgcagtcccaagtttctctctcttc-agctctccttcaaaaaactgcaaagaaacacttatata 23392244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 29682297 - 29682241
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    |||||||||||||||||| || ||||||||| ||   ||||||||||||||||||||    
T  29682297 agaactctaatcaaagacccttaaccctaaatttaactcctttgatttcccaagttt 29682241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 16498968 - 16498913
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtt 69  Q
    |||||||||||||||||| || |||||  ||||| | |||||||||||||||||||    
T  16498968 agaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagtt 16498913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 23198288 - 23198323
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||| ||||||||||||||||||    
T  23198288 aaaatcgtgtcacgatttccaaatcgtgtcacgatt 23198323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 23200487 - 23200522
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||| ||||||||||||||||||    
T  23200487 aaaatcgtgtcacgatttccaaatcgtgtcacgatt 23200522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 32143705 - 32143740
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32143705 aaaatcgtgtcacgatttccaaatcgtgtcacgatt 32143740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 285
Target Start/End: Complemental strand, 47303802 - 47303767
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    |||||||||||||| |||||||||||||||||||||    
T  47303802 aaaatcgtgtcacggttgccaaatcgtgtcacgatt 47303767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 29100431 - 29100493
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctct 78  Q
    |||||| | |||||||||| ||||||||| || | ||||||| |||||||||||||| |||||    
T  29100431 aactctcaccaaagacactcaaccctaaacttccctcctttggtttcccaagtttctttctct 29100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 32143597 - 32143750
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| ||||||| |||| | |||||||   ||| || ||||||||||||||| ||||||| ||||||||||| ||||||||||| |||   |||    
T  32143597 caaagacactcaaccctagagttccctcctttgtaatccaaa-tttctctctcttcaa-ctctcctccaaaatctgcacaagaacacttaaatacaagtc 32143694  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacg 180  Q
    |||  | |  |||||||||||||| |||  || ||||||| |||||||||| ||||||    
T  32143695 ttcaactgataaaatcgtgtcacgattt--ccaaatcgtgtcacgattgatacgtacg 32143750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 53921856 - 53921913
Alignment:
Q  156 aatcgtgccacgattgatgcg--tacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||||||| |||||||||||||  |||||  |||||||| |||||||||||||||||||    
T  53921856 aatcgtgtcacgattgatgcgcatacgactcaaggtacgaccaaccttatcctgaaaa 53921913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 1306343 - 1306397
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    |||||||||||||||||| |  || ||||||||||||| |||| |||||||||||||    
T  1306343 aaaatcgtgtcacgatttcc--aagtcgtgtcacgatttccaagtcgtgtcacgatt 1306397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 1306343 - 1306380
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatttc 287  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  1306343 aaaatcgtgtcacgatttccaagtcgtgtcacgatttc 1306380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 32891041 - 32890968
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||| |||||||||||| || |||||||||||| | |||||||| || |||| |||  ||||||| |||||||    
T  32891041 agaaccctaatcaaagaccctcaaccctaaagttacctcctttgactttccaaattttcctctcttgaagctct 32890968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 800831 - 800795
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  800831 aaatcgtgtcacgatttcccacaatcgtgtcacgatt 800795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 22172738 - 22172698
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  22172738 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 22172698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 285
Target Start/End: Original strand, 24968630 - 24968662
Alignment:
Q  253 atcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||||||||||| |||||||    
T  24968630 atcgtgtcacgattgccaaatcgtgacacgatt 24968662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 25796056 - 25796108
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||||| |||||| ||||| | |||||||  ||||||||||||||||||    
T  25796056 caaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 25796108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 28501228 - 28501188
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  28501228 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 28501188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 28503395 - 28503355
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  28503395 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 28503355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 40372332 - 40372292
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  40372332 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 40372292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 45282709 - 45282677
Alignment:
Q  232 atcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||||||||||||||| ||||||||||||||    
T  45282709 atcgtgtcacgattttcccaaatcgtgtcacga 45282677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 30834766 - 30834998
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30834766 agaactctaatcaaagaccataaaccctaaagttgcttcctttgatttctcaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 30834865  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacg-tttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30834866 tatagttgtcttctgtgtcaaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaat 30834965  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     ||||||||||||||||||||||||||||||||    
T  30834966 cttgcccagcaagccaaaaatcgtgtcacgatt 30834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 5406428 - 5406749
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  5406428 agaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaataacactta 5406527  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||     
T  5406528 tatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatc 5406627  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttcc------aaaatcgtgtcacg--attgcc-aaatcgtgtcacgatttctctgcttcccaactttg 304  Q
    ||||||||||||||||||||||||||||||||   |      |||| |   || ||  ||| || |||||||||||||||||||||||||||||||||||    
T  5406628 ttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatttctctgcttcccaactttg 5406727  T
Q  305 ctatttgaagacatacataaca 326  Q
    | ||||||||||||||| ||||    
T  5406728 caatttgaagacatacacaaca 5406749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 5410753 - 5411074
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  5410753 agaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaataacactta 5410852  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||     
T  5410853 tatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatc 5410952  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttcc------aaaatcgtgtcacg--attgcc-aaatcgtgtcacgatttctctgcttcccaactttg 304  Q
    ||||||||||||||||||||||||||||||||   |      |||| |   || ||  ||| || |||||||||||||||||||||||||||||||||||    
T  5410953 ttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatttctctgcttcccaactttg 5411052  T
Q  305 ctatttgaagacatacataaca 326  Q
    | ||||||||||||||| ||||    
T  5411053 caatttgaagacatacacaaca 5411074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 31404903 - 31405135
Alignment:
Q  14 agaactctaatcaaa-gacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactt 112  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31404903 agaactctaatcaaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaataacactt 31405002  T
Q  113 atatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| |    
T  31405003 atatagctgtcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcctgaaagt 31405102  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     || |||||||||||||||| ||||||||||||    
T  31405103 ctttcccagcaagccaaaaaacgtgtcacgatt 31405135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 40 - 267
Target Start/End: Original strand, 5411489 - 5411716
Alignment:
Q  40 ctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgcgtcaaaatcg 139  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||| ||||| ||||||    
T  5411489 ctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcg 5411588  T
Q  140 tgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtc 239  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||    
T  5411589 tgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtc 5411688  T
Q  240 acgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||||||||||||||||||    
T  5411689 acgattttccaaaatcgtgtcacgattg 5411716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 40 - 267
Target Start/End: Original strand, 5407164 - 5407391
Alignment:
Q  40 ctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgcgtcaaaatcg 139  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||| ||||| ||||||    
T  5407164 ctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcg 5407263  T
Q  140 tgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtc 239  Q
    |||||| ||||||  |||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||    
T  5407264 tgtcacatttttcttcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtc 5407363  T
Q  240 acgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||||||||||||||||||    
T  5407364 acgattttccaaaatcgtgtcacgattg 5407391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 16452559 - 16452757
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16452559 agaactctaatcaaagaccctaaactctaaagttgcttactttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacactta 16452658  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||| |||||||  |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  16452659 tatagctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaat 16452757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 33160583 - 33160815
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt-ctctctcttcaagctctccttcaaaatctgcaaagaacactt 112  Q
    |||||||||||||||||| || |||||||||||| | |||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  33160583 agaactctaatcaaagactctcaaccctaaagttacctcctttgattccccaagttttctctctcttccagctctccatcaaaatctgcaaagaacactt 33160682  T
Q  113 atatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||||  |||||| |||||||||| |||||||||||| |  |||||||| |||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  33160683 atatagcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaat 33160782  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     ||||||||||||||||||||||||||||||||    
T  33160783 cttgcccagcaagccaaaaatcgtgtcacgatt 33160815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 9183261 - 9183492
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9183261 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaaaactta 9183360  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||| |||||| ||||||||||||||||                     ||||||||||||||||| ||||||||| |||||||||||||||||||      
T  9183361 tatagtagtcttcagcgtcaaaatcgtgtc---------------------acgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-c 9183438  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  9183439 ttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 9183492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 5413622 - 5413775
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  5413622 agaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctatcttcaagctcaccttcaaaatctgcaaagaacactta 5413721  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacg 167  Q
    |||||   ||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  5413722 tatagcaatcttcagcgtcgaaatcgtgtaacgtttttccccaatcgtgccacg 5413775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 16452759 - 16452901
Alignment:
Q  103 aagaacacttatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaacctta 202  Q
    |||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16452759 aagaacacttatatagctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaacctta 16452858  T
Q  203 tcctgaaaattttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  16452859 tcctgaaaatctttcccagcaagccaaaaatcgtgtcacgatt 16452901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 65 - 267
Target Start/End: Original strand, 22964012 - 22964213
Alignment:
Q  65 aagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgc 163  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||||| ||| |||     
T  22964012 aagtttctctcttttcaagctctagttcaaaatctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacg-ttttcccaaattgtga 22964110  T
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
    |||| |||  ||||||||| |||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||| ||| |||||||||| |||||    
T  22964111 cacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacg 22964209  T
Q  264 attg 267  Q
    ||||    
T  22964210 attg 22964213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 65 - 267
Target Start/End: Complemental strand, 23824381 - 23824180
Alignment:
Q  65 aagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgc 163  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||||| ||| |||     
T  23824381 aagtttctctcttttcaagctctagttcaaaatctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacg-ttttcccaaattgtga 23824283  T
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
    |||| |||  ||||||||| |||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||| ||| |||||||||| |||||    
T  23824282 cacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacg 23824184  T
Q  264 attg 267  Q
    ||||    
T  23824183 attg 23824180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 31086297 - 31086053
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| |  |||||| |   |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||  |||    
T  31086297 caaagacactcaaccctaaagttaccccctttg-taatccaagtttctctctcttccagctcaccttcaaaatctgcacaagaacacttatatagcagtc 31086199  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| ||  ||||||||||||||||||||| || ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   | || |||    
T  31086198 ttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaacgtacctagc 31086099  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||||||||||||||| ||||||||    
T  31086098 aagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattg 31086053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 5413807 - 5413909
Alignment:
Q  143 cacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacg 242  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5413807 cacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 5413906  T
Q  243 att 245  Q
    |||    
T  5413907 att 5413909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 18234357 - 18234543
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||| | | |||||||   ||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||  |||    
T  18234357 caaagacactcaaccctaaagctacctcctttgtaatcc-aagtttctttctcttcaagctctccttcaaaaactgcacaagaacacttatatagcagtc 18234455  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |||||||||||||||||||| |||  ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  18234456 ttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 18234543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 33211415 - 33211666
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||  ||||||| | ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  33211415 agaactctaatcaaagaccctcaactgtaaagttacctcctttgatttcccaagtttctctctcttcaacttctccttcacaatctgcaaagaacactta 33211514  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  || ||  || ||||||||||||||| | ||||  | ||||||| || | ||| ||||||||| |||| |||| |  |||| |||||| ||||     
T  33211515 tatagcagtattgagctgtcaaaatcgtgtcatg-ttttgtcaaatcgtgacatggttggtgcgtacgacccaaagtacgataaaccatatcct-aaaaa 33211612  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
      |||||| |||||| |||||| || |||| |||||||||||||||| |||||||    
T  33211613 cgtgcccaacaagcc-aaaatcatgacacgtttttccaaaatcgtgttacgattg 33211666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 10077014 - 10076828
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||| |||||||||||||||||||||| |||||||  |||||||   ||    
T  10077014 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttaaagctctccttcaaaatctgcacaagaacatatatatagcaatc 10076916  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |||||| ||||||||||||| |||  ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  10076915 ttcagctgtcaaagtcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 10076828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 5017282 - 5017076
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    |||||||||||| ||||    ||||||||||||||||||| ||||||||||||||||  |||||| || |||||||||||||||| ||||| |  |||||    
T  5017282 ccaagtttctctttctttttcctctccttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttca-aatcg 5017184  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgt 259  Q
    || |||||||| ||||||||| ||||||||| ||||||||||||||||||| | | ||||| |||    |||||||||||||| |||  ||||||||||     
T  5017183 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtacccagtaagtttgaaaatcgtgtcacgttttctcaaaatcgtga 5017084  T
Q  260 cacgattg 267  Q
    ||||||||    
T  5017083 cacgattg 5017076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 5407422 - 5407517
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  5407422 aaaatcgtgtcacgattg--caaaatggtgtcacgattgccaaatcgtgtcacgatttctctacttcccaactttgcaatttgaagacatacacaaca 5407517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 5411747 - 5411842
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  5411747 aaaatcgtgtcacgattg--caaaatggtgtcacgattgccaaatcgtgtcacgatttctctacttcccaactttgcaatttgaagacatacacaaca 5411842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 5757301 - 5757116
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||| ||||||||| ||||||||||| || ||||||||| |||  |||    
T  5757301 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttccagctctcctccaaaatctgcacaaaaacacttatttagcagtc 5757203  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  ||||||||| ||||||||  || |||||||||||||||||| | ||||| | ||||||| |||||||||||||||||||    
T  5757202 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatacatacgaccaaaggtacgaccaaccttatcctgaaaa 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 33160845 - 33160924
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  33160845 ccaaaatcgtgacacgcttgccaaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaacaa 33160924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 2171763 - 2171860
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||    
T  2171763 aactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttctagctcaccttc-aaatctgcacaagaacactta 2171860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 331
Target Start/End: Original strand, 16452934 - 16453033
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaatt 329  Q
    ||||||||||||||||  |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||    
T  16452934 aaatcgtgtcacgattgcc--aaatcatgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttacaatttgaagacatacacaacattt 16453031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 31979786 - 31980032
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaa--cacttatatagtt-- 120  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  ||||||||  |||||||||| ||||||  ||||||||||  |      
T  31979786 caaagacactcaaccctaaagttacctcctttgcagtcc-aagtttctctctctaaaagctctctctcaaaatctggaaagaaaacacttatatatatag 31979884  T
Q  121 --gtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgc 217  Q
      ||||||    |||||||||||||||||||| |||  ||||||| |||||||| |||||||||  ||| |||| |||||||||||||||||||   |||    
T  31979885 cagtcttcaattgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaa-cgtgc 31979982  T
Q  218 ccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||   ||||| |||||||| ||||||||||||||| ||||||||    
T  31979983 ccagcaagttgaaaattgtgtcacgtttttccaaaatcgtgacacgattg 31980032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 65 - 267
Target Start/End: Complemental strand, 21272773 - 21272571
Alignment:
Q  65 aagtttctctctcttcaagctctccttcaaaatctgcaaagaa-cacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 162  Q
    ||||||||||| ||||||| ||| |||||||| |||||||||| |||||||||||  |||||| |  |||||||| |||||||| ||  ||  |||| ||    
T  21272773 aagtttctctcacttcaagttctacttcaaaaactgcaaagaaacacttatatagcagtcttcagttgtcaaaattgtgtcacgattggcca-aatcttg 21272675  T
Q  163 ccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcac 262  Q
     |||| ||| ||||||||||||||||||  |||||||||||||||||||   |||| | || | ||||||||||| |||||||  |||||||||||||||    
T  21272674 acacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaa-cgtgccaaacatgtcaaaaatcgtgacacgattacccaaaatcgtgtcac 21272576  T
Q  263 gattg 267  Q
    |||||    
T  21272575 gattg 21272571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 5413941 - 5414018
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |||||||| |||||    
T  5413941 aaaatcgtgtcacgattaccaaatcgtgtcacgatttctctgcttcccatctttgcaatttgaggacatacacaacaa 5414018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 603612 - 603719
Alignment:
Q  159 cgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtg 258  Q
    |||| |||| ||| ||||||||||||||| ||| | ||||||||||||||||| || |||||||||||| |||||| ||||||| ||| |||||||||||    
T  603612 cgtgacacgtttggtgcgtacgatccaagatacgatcaaccttatcctgaaaactt-gcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtg 603710  T
Q  259 tcacgattg 267  Q
    |||||||||    
T  603711 tcacgattg 603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 21593267 - 21593134
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    |||||||||||||| |||| ||| ||||||| |||| ||| | || |||| ||||||||| |||||||||||||| ||||  | |||||||||||| |||    
T  21593267 caaaatcgtgtcacatttt-cccaaatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaaacat-gcccagcaagccgaaa 21593170  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| ||||||| ||||||||||||    
T  21593169 atcgtgtcacgttttcccaaaattgtgtcacgattg 21593134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 266
Target Start/End: Complemental strand, 24435795 - 24435555
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaa-cacttatatagttgtc 123  Q
    |||||||||| ||||||||||||   |||||||   ||| | ||||||||||||||||||| | ||||||||| |||||| || |||||||||||  |||    
T  24435795 caaagacactcaaccctaaagttatctcctttgtaatccta-gtttctctctcttcaagctattcttcaaaatttgcaaacaaacacttatatagcagtc 24435697  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    |||  | |||||| |||||||||| ||  ||  ||||||| |||| ||| ||||||| | ||||||||| |||||||||||||||||||   |||| | |    
T  24435696 ttcaactgtcaaattcgtgtcacgattggcca-aatcgtgacacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaa-cgtgccaaac 24435599  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||   |||||||||||||| ||| |||||||| || |||||||    
T  24435598 aagttgaaaatcgtgtcacgttttcccaaaatcatgacacgatt 24435555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 9183521 - 9183592
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacata 319  Q
    ||||||||||| |||| |||||||||||||||| |||||||||| || |||||||||| |||||||||||||    
T  9183521 ccaaaatcgtgacacgcttgccaaatcgtgtcatgatttctctgttttccaactttgcaatttgaagacata 9183592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 412043 - 411949
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| |||||||||| |||| || ||||||||||| ||||||||||||||||| | ||| ||||| ||||||||| |||||||||||    
T  412043 ctctaatcaaagactctaaaccctagagttactccctttgatttctcaagtttctctctcttccaactc-ccttc-aaatctgcacaagaacactta 411949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 26954517 - 26954589
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||||||||    
T  26954517 aactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagctctc 26954589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 3809318 - 3809406
Alignment:
Q  175 cgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||| ||||||||| ||||||||||||||||||| ||| ||    ||||| |||||||||||||| ||  ||||||||||||||||||||    
T  3809318 cgtacgacccaaggtacgaccaaccttatcctgaaaactttccc----aagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattg 3809406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 5571956 - 5571846
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||||||| ||||||||| ||||||||| |||||||||| ||| ||||  | ||||||||||   |||||||||||||| |||  |||||||    
T  5571956 aatcgtgtcacgattggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgt-gcccagcaagttgaaaatcgtgtcacgttttctcaaaatc 5571858  T
Q  256 gtgtcacgattg 267  Q
    ||| ||||||||    
T  5571857 gtgacacgattg 5571846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 6097666 - 6097776
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttat 114  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||| |   ||| ||||| ||||||||| |||||||||||     
T  6097666 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctctactctctcaccttc-aaatctgcacaagaacacttaa 6097764  T
Q  115 atagttgtcttc 126  Q
    ||| | ||||||    
T  6097765 atactagtcttc 6097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 23896737 - 23896847
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaat 254  Q
    |||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||  ||  ||||||||   |||||||||||||||||||  ||||||    
T  23896737 aatcgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaa-cttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaat 23896835  T
Q  255 cgtgtcacgatt 266  Q
    |||  |||||||    
T  23896836 cgtaccacgatt 23896847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 3072987 - 3073045
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctct 76  Q
    |||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||    
T  3072987 ctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagtttctctct 3073045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 26954675 - 26954760
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacg 242  Q
    ||||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||| | || | |||| ||||||||||||| ||||    
T  26954675 aatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-tgtgtcaagcatgccaaaaatcgtgacacg 26954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 30835032 - 30835088
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  30835032 aaatcgtgttacgatttctctgcttccaaactttgcaatttgaagacatacacaaca 30835088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 31405168 - 31405224
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||    
T  31405168 aaatcgtgtcacgatttctctacttcccaactttacaatttgaagacatacacaaca 31405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 31936849 - 31936943
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||||||  || |||| ||||||||||||||||| ||||||||||||||    
T  31936849 caaagacactcaaccctaaagttacctcctttgcaatcc-aagtttctctctctaaaacctctacttcaaaatctgcaaagaaacacttatatagt 31936943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 16567144 - 16567070
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||||||||  ||||||| ||| ||||    
T  16567144 agaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 16567070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 27647806 - 27647709
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc-cttcaaaatctgca-aagaacactt 112  Q
    |||||||||||||| | |||||||||| |||| || ||||||||||||||||| ||||||||||| | ||||| |||| ||||||||| ||||||||||    
T  27647806 actctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaagtctctctctcttccaactctctcttc-aaatctgcacaagaacactt 27647709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 16568981 - 16568916
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    |||||||||||||||||| || ||||||||| ||  |||||||||||||||||||||  |||||||    
T  16568981 agaactctaatcaaagacccttaaccctaaatttaattcctttgatttcccaagttttcctctctt 16568916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 3039152 - 3039219
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||| || |||||||||||| | |||||||| ||||||||||| |||||||| ||||||||    
T  3039152 ctaatcaaagaccctcaaccctaaagttacctcctttga-ttcccaagtttttctctcttgaagctctc 3039219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 23896663 - 23896719
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatag 118  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||    
T  23896663 ccaagtttctctctcttcaagctcttcttcaaaatatgcacaagaactcttatatag 23896719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 26661547 - 26661421
Alignment:
Q  135 aatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatc 234  Q
    |||| ||||||||||| ||| ||||||| ||   ||| ||||||||| ||||||||| |||||||||||||||||||    | |||||||| | ||||||    
T  26661547 aatcatgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgagtccagcaagtcgaaaatc 26661450  T
Q  235 gtgtcacgattttccaaaatcgtgtcacg 263  Q
     ||||||  ||| ||||||||||||||||    
T  26661449 ttgtcacattttcccaaaatcgtgtcacg 26661421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 26767518 - 26767392
Alignment:
Q  135 aatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatc 234  Q
    |||| ||||||||||| ||| ||||||| ||   ||| ||||||||| ||||||||| |||||||||||||||||||    | |||||||| | ||||||    
T  26767518 aatcatgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgagtccagcaagtcgaaaatc 26767421  T
Q  235 gtgtcacgattttccaaaatcgtgtcacg 263  Q
     ||||||  ||| ||||||||||||||||    
T  26767420 ttgtcacattttcccaaaatcgtgtcacg 26767392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 28137638 - 28137712
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||| ||||||||  ||||||| ||| ||||    
T  28137638 agaactctaatcaaagaccctcaaccctaaagttaactcctttgattttccaagttttcctctcttgaagttctc 28137712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 5572029 - 5571945
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacg 146  Q
    ||||||||||||||||  |||||||||||||||| || || ||||||||||||||||  |||||| |  |||||||||||||||||    
T  5572029 ccaagtttctctctcta-aagctctccttcaaaaactccacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacg 5571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 17759494 - 17759427
Alignment:
Q  195 caaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
    ||||||||||||||||| || | |||||||||| ||||| |||||||| ||  ||||||||||||||||    
T  17759494 caaccttatcctgaaaactt-gtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacg 17759427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 30517954 - 30517894
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctct 76  Q
    |||||| | |||||||||| ||| |||||||| | || |||||||||||||||||||||||    
T  30517954 aactctcaccaaagacactcaactctaaagttccctcatttgatttcccaagtttctctct 30517894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30684158 - 30684210
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||| |||  |||||||| ||||||||||||||||| ||||||||    
T  30684158 aaccctaaagttacttgatttgatttaccaagtttctctctcttgaagctctc 30684210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 246
Target Start/End: Complemental strand, 5413808 - 5413777
Alignment:
Q  215 tgcccagcaagccaaaaatcgtgtcacgattt 246  Q
    ||||||||||||||||||||||||||||||||    
T  5413808 tgcccagcaagccaaaaatcgtgtcacgattt 5413777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 5407420 - 5407457
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  5407420 ccaaaatcgtgtcacgattgcaaaatggtgtcacgatt 5407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 5411745 - 5411782
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatt 285  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  5411745 ccaaaatcgtgtcacgattgcaaaatggtgtcacgatt 5411782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 22709498 - 22709535
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  22709498 aaaatcgtgtcacgatttcccaagatcgtgtcacgatt 22709535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 23896867 - 23896920
Alignment:
Q  238 tcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||| || |||||||||||||||||  | ||||||||||||||||| ||||    
T  23896867 tcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctg 23896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 6439008 - 6439044
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttct 288  Q
    ||||||||||||||| | |||||||||||||||||||    
T  6439008 aatcgtgtcacgattccaaaatcgtgtcacgatttct 6439044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 11857491 - 11857531
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  11857491 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 11857531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 14742002 - 14741962
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  14742002 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 14741962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 22010265 - 22010225
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  22010265 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 22010225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 22709403 - 22709439
Alignment:
Q  250 aaaatcgtgtcacgattgccaaatcgtgtcacgattt 286  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  22709403 aaaatcgtgtcacgatttccaagtcgtgtcacgattt 22709439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 30125094 - 30125054
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  30125094 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 30125054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 2e-86; HSPs: 94)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 5370316 - 5370558
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5370316 agaactataatcaaagaccctaaaccctaaagttgtctcctttgatttctcaagtttctctctcttcaagttctccttcaaaatctgcaaagaacactta 5370415  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacg-tttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||            |||||||||||||||||| |    
T  5370416 tatagttgtcttcagcgtcgaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacg------------accaaccttatcctgaaagt 5370503  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5370504 cttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 5370558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 52082887 - 52083118
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  52082887 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctgtccttcaaaatttgcaaagaacactta 52082986  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||  ||||||||||||||||||||     
T  52082987 tataggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatc 52083086  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||| ||||||||||||||||||||||||    
T  52083087 ttgcccaacaagccaaaaatcgtgtcacgatt 52083118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 52093894 - 52094125
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  52093894 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctgtccttcaaaatttgcaaagaacactta 52093993  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||  ||||||||||||||||||||     
T  52093994 tataggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatc 52094093  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
    ||||||| ||||||||||||||||||||||||    
T  52094094 ttgcccaacaagccaaaaatcgtgtcacgatt 52094125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 52095592 - 52095843
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||| | || |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  52095592 agaactctaatcaaagtccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctgtccttcaaaatctacaaagaacactta 52095691  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  |||||| ||||| |||||||  |||||||||||   |||||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||     
T  52095692 tatagcagtcttcagcgtcgaaatcgt--cacgtttttcctatatcgtgtcacgattgatgcttacgacccaaggtacgaccaaccttatcctgaaaatc 52095789  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  52095790 ttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 52095843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 34570644 - 34570894
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||| | | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||    
T  34570644 agaactctaatcaaagaccctcaaccctaaagctacctcctttgatttcccaagtttctctctgttccagctctccttcaaaatctgcaaagaacacata 34570743  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||| |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||     
T  34570744 tatagtagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa- 34570841  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgat 265  Q
     ||| |||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  34570842 cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 34570894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 56178866 - 56179107
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56178866 agaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctctttcaaaatctgcaaagaacactta 56178965  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    ||||   |||||| ||||| |||||||||||| ||||||||  |||||| |||||||||||||||||            ||||||||||||||||||||     
T  56178966 tataacagtcttcagcgtcgaaatcgtgtcacatttttcccagatcgtgtcacgattgatgcgtacg------------accaaccttatcctgaaaatc 56179053  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  56179054 ttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacgattg 56179107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 37740564 - 37740312
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||||||||| || | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37740564 agaactctaatcaaagaccctcaaccctaaacttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatctgcaaagaacactta 37740465  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||| ||||||| |||  ||| || |||||| ||||||||| |||||||||||||||||||     
T  37740464 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacatttggtgtgtacgacccaaggtacgaccaaccttatcctgaaaa- 37740367  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||| ||||||| |||||| ||||||| ||| |||||||||||| |||||||    
T  37740366 cttgccctgcaagccgaaaatcatgtcacgttttcccaaaatcgtgttacgattg 37740312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 30000035 - 30000212
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30000035 agaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaaaaacactta 30000134  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtac 191  Q
    |||||   ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  30000135 tatagcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtac 30000212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 14 - 266
Target Start/End: Complemental strand, 5429617 - 5429367
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  5429617 agaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctctctcttcaagctctccttcaaggtctgcaaagaacactta 5429518  T
Q  114 tatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaatt 213  Q
    |||||  || ||| ||||||||||||||||| | |||||||  |||||| |||||||| ||||||||| ||||||||| ||||| |||| ||||||||      
T  5429517 tatagcagttttcagcgtcaaaatcgtgtcatg-ttttcccacatcgtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaa-c 5429420  T
Q  214 ttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||| ||| |||||  |||||||| ||||| ||| |||||||||||||||||||    
T  5429419 ttgtccaacaagctgaaaatcgtatcacgttttcccaaaatcgtgtcacgatt 5429367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 48142980 - 48142760
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc-cttcaaaatctgcaaagaacactt 112  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  48142980 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttctagctctctcttcaaaaactgcaaagaacactt 48142881  T
Q  113 atatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    ||||||  | |||| ||||| ||||||||||||||||||||| ||||||| |||||||||||||||||            ||||||||||||||||||||    
T  48142880 atatagcagacttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcgtacg------------accaaccttatcctgaaaat 48142793  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     ||||||| |||||||||||| |||||||||||    
T  48142792 cttgcccaacaagccaaaaattgtgtcacgatt 48142760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 36315053 - 36314812
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    ||||||||||||||||||||||| | |||||||   ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  36315053 caaagacactaaaccctaaagttacctcctttgtaatcc-aagtttatctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 36314955  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||| |||  ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   ||||||||    
T  36314954 ttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagc 36314857  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||||| ||| ||||||||||| ||||||||    
T  36314856 aagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 36314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 36329262 - 36329021
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    ||||||||||||||||||||||| | |||||||   ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  36329262 caaagacactaaaccctaaagttacctcctttgtaatcc-aagtttatctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 36329164  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||| |||  ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   ||||||||    
T  36329163 ttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagc 36329066  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||||| ||| ||||||||||| ||||||||    
T  36329065 aagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 36329021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 9927687 - 9927943
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||| ||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  9927687 agaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctccttcaaaatctgcagagaacactta 9927786  T
Q  114 tatagttgtcttctgc----gtcaaaa-tcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctga 208  Q
    | |||  ||||||  |    | ||||| | |||||||| ||||||| ||||||| |||| ||| ||||||||| |||||| || ||||||||||||||||    
T  9927787 tttagcagtcttcatcagctgccaaaatttgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctga 9927885  T
Q  209 aaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||  ||| |||||||||| |||||||||||||  ||| ||||||||||||||||||||    
T  9927886 aaa-cttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtgtcacgattg 9927943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 54867453 - 54867694
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||    
T  54867453 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctcctccaaaatctgcacaagaacacttatatagtagtc 54867551  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||| |||  ||||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||   ||||||||    
T  54867552 ttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgatccaaggtacgaccaaccttatcc-gaaaaacgtgcccagc 54867649  T
Q  223 aagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||||| ||| ||||||| ||| ||||||||    
T  54867650 aagttgaaaatcgtgtcacgttttcccaaaattgtgacacgattg 54867694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 25 - 266
Target Start/End: Complemental strand, 8689319 - 8689079
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    ||||||||||||||||||||||| | |||||||   ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||    
T  8689319 caaagacactaaaccctaaagttacctcctttgtaatcc-aagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 8689221  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || |||||||||||||||||||||  || ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   | ||||||    
T  8689220 ttcagctgtcaaaatcgtgtcacgtttt--ccaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccagc 8689124  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||    |||||||||||||| ||| |||||||||||||||||||    
T  8689123 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgatt 8689079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 29254432 - 29254202
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    ||||||||| ||||||||  | ||||||||||||   |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  29254432 agaactctactcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttctctctctacaacctcaccttcaaaatctgcaaagaacactta 29254333  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || |||||||||||||||||||||| || ||||||| |||| ||| ||||||||||||||  ||| ||||||||||| ||||| |     
T  29254332 tatagcagtcttcagctgtcaaaatcgtgtcacgttttt-ccaaatcgtgacacgtttggtgcgtacgatccaaaatacgaccaaccttattctgaata- 29254235  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     ||||||| |||||| |||||| ||||||||||    
T  29254234 cttgcccaacaagccgaaaatcatgtcacgatt 29254202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 54200136 - 54200366
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | ||||||||||||| |||||||||||||||  |||||| |||||||| || |||||||||||||    
T  54200136 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcctaagtttctctctctttcagctcttcttcaaaaactacaaagaacactta 54200235  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| ||  |||||||||||||||  ||||||| ||||||| |  | ||| ||||||||| ||||||||| |||||||||||| ||||||     
T  54200236 tatagcagtcttcagctatcaaaatcgtgtcac-attttcccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaa- 54200333  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgatt 245  Q
     |||||||||||||| |||||||||||||||||    
T  54200334 cttgcccagcaagccgaaaatcgtgtcacgatt 54200366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 263
Target Start/End: Original strand, 26175864 - 26176102
Alignment:
Q  12 acagaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacact 111  Q
    |||||||| ||||||||||| || ||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26175864 acagaactttaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacact 26175963  T
Q  112 tatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaa 210  Q
    |||||||  |||||| || ||||||||||||||||| |||| |  |||| || |||| ||| ||||||||            ||||||||||||||||||    
T  26175964 tatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttgctaaatcatgacacgtttggtgcgtacg------------accaaccttatcctgaaa 26176050  T
Q  211 attttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacg 263  Q
    |  ||||||| |||||| |||||||||||||| ||| ||||||| ||||||||    
T  26176051 a-cttgcccatcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacg 26176102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 25861856 - 25861614
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | | ||||| |   ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||  |||    
T  25861856 caaagacactcaaccctaaagttaccttctttg-taatccaagtttctctctctaaaagctctccttcaaaatctgcaaagaaacacttatatagaagtc 25861758  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    |||  | |||||||||||||||||||| | || ||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||   ||||||||    
T  25861757 ttcaactgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catgcccagc 25861660  T
Q  223 aagccaaaaatcgtgtcacgatttt-ccaaaatcgtgtcacgattg 267  Q
    |||   |||||||||||||| |||| ||||||||||| ||||||||    
T  25861659 aagttgaaaatcgtgtcacgtttttcccaaaatcgtgacacgattg 25861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 12739780 - 12740014
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||||| |||  |||||||||||| ||||||||||||    
T  12739780 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaacctccacttcaaaatctgtaaagaacactta 12739879  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||  |||| |  |||||||| ||||||||            |||||||||||||||||||     
T  12739880 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttccaaaatcataacacgattggtgcgtacg------------accaaccttatcctgaaaaa 12739966  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtc 260  Q
     |||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  12739967 cttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12740014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 12747986 - 12748220
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||||| |||  |||||||||||| ||||||||||||    
T  12747986 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaacctccacttcaaaatctgtaaagaacactta 12748085  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || ||||||||||||||||| ||||||  |||| |  |||||||| ||||||||            |||||||||||||||||||     
T  12748086 tatagcagtcttcagctgtcaaaatcgtgtcacg-ttttccaaaatcataacacgattggtgcgtacg------------accaaccttatcctgaaaaa 12748172  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtc 260  Q
     |||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  12748173 cttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12748220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 5269023 - 5268781
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  5269023 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 5268925  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    ||| || || ||||||||||||||||| |||  ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   | |||| |    
T  5268924 ttcagctgttaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccaac 5268827  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||||||| ||||||||    
T  5268826 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 5268781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 16623116 - 16622931
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||||  | |    
T  16623116 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttctagctctccttcaaaatctgcacaaaaacacttatatagcagcc 16623018  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||  | |||||||||||||||||||||  || ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  16623017 ttcacctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16622931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 12745666 - 12745899
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacactta 113  Q
    |||||||||||||||||| || ||| |||||||| | ||||||  |||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  12745666 agaactctaatcaaagaccctcaactctaaagttacctccttttttttcccaagtttctctctcttcaacctcaacttcaaaatctgcaaagaacactta 12745765  T
Q  114 tatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaat 212  Q
    |||||  |||||| || |||||||||||| |                     |||||||  |||||||| ||||||||| ||||||||||||||| |||     
T  12745766 tatagcagtcttcagctgtcaaaatcgtgac---------------------acgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaa 12745844  T
Q  213 tttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
     |||||||||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  12745845 cttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcatgtcacgattg 12745899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 13992519 - 13992769
Alignment:
Q  17 actctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttata 115  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| |    
T  13992519 actctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctctctcttcaagctctccctccaaatctgcacaagaacacttaaa 13992618  T
Q  116 tagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaacca-accttatcctgaaaatt 213  Q
    || | ||||||  | |  |||||||||||||| |||  ||  |||||| |||||||||| ||||||   |||||||  ||||  ||||||| ||||||      
T  13992619 tactagtcttccactgataaaatcgtgtcacgattt--ccagatcgtgtcacgattgatacgtacgtcacaaggtatgaccagtccttatcatgaaaa-c 13992715  T
Q  214 ttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||  | ||||||    |||||||||||||||||| |||||||||||||||||||    
T  13992716 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatt 13992769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 6743201 - 6742998
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 160  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||||||  | |||||||| |||||| ||||| ||| |||||    
T  6743201 ccaagtttctctctcttcaagctctacttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcaagtttt-cccaaatcg 6743103  T
Q  161 tgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtc 260  Q
    || |||||||  ||||||||  ||||||||| |||||||||||||||||||   |||||| ||||   |||||||||||||| ||| |||||| |||| |    
T  6743102 tgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagtttaaaatcgtgtcacgttttcccaaaaacgtgcc 6743004  T
Q  261 acgatt 266  Q
    ||||||    
T  6743003 acgatt 6742998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 3777823 - 3778008
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||  |||    
T  3777823 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctcaccttcaaaatctgcacaagaacatttatatagcagtc 3777921  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || ||||||||| ||||| |||||  || || |||| |||||||| ||||||||| ||||||||| |||||||||||| ||||||    
T  3777922 ttcagctgtcaaaatcatgtcaagtttt--ccaaaacgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaa 3778008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 16628695 - 16628453
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| || ||||||||||||| ||||||||||||||||||| | || |||||||||||||  | |    
T  16628695 caaagacactcaaccctaaagttacctcctttgcaatcc-aattttctctctcttctagctctccttcaaaatctgaacaaaaacacttatatagcagcc 16628597  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagc 222  Q
    |||  | |||||||||||||||||||||  || ||||||| |||||||| ||||||||| ||||||||| |||||||||||| ||||||   |  | |||    
T  16628596 ttcatctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcatgaaaaaagtaacaagc 16628499  T
Q  223 aag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||    |||||||||||||| ||| ||||||||||| ||||||||    
T  16628498 aagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 16628453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 5147952 - 5148137
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    ||||||||||||||||||||||| | |||| || |   |||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||  |||    
T  5147952 caaagacactaaaccctaaagttacctcctgtg-taatccaagtttctctcatttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 5148050  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||   | |  || |||||||||||||||   | ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  5148051 ttaaactgataagatcgtgtcacgtttt--gcaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5148137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 327 - 396
Target Start/End: Original strand, 11784518 - 11784587
Alignment:
Q  327 attatgtctagtaagttattcttaaagcagcaaatatgatgaaatacattataggactcatgttgcattc 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11784518 attatgtctagtaagttattcttaaagcagcaaatatgatgaaatacattataggactcatgttgaattc 11784587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 26363866 - 26363733
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||| ||| |||| ||| ||||||||| ||||||||  ||||||||||||||||||| || || ||||||||| |||    
T  26363866 caaaatcgtgtcacgattt-cccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaactt-gctcagcaagccgaaa 26363769  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| ||||||||||||||||||||    
T  26363768 atcgtgtcacgttttcccaaaatcgtgtcacgattg 26363733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 46570116 - 46570226
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||||||||||||| |||| |||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||| ||||||||    
T  46570116 aatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaa-tttgcccagcaagccgaaaattgtgtcacgttttcccaaaatc 46570214  T
Q  256 gtgtcacgattg 267  Q
     |||||||||||    
T  46570215 ttgtcacgattg 46570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 5143534 - 5143720
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||| || |   ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||  |||    
T  5143534 caaagacactcaaccctaaagttacctcctctg-taatccaagtttctcttacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtc 5143632  T
Q  124 ttc--tgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    |||  |   | ||||||||||||||||||  || ||||||| |||||||| |||| || | ||||||| | |||||||||||||||||||    
T  5143633 ttcagtagataaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaa 5143720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 6655557 - 6655424
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| |||| |||| |||||||||||||||||||  ||||||||||| || |||    
T  6655557 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cttgcccagcaaaccgaaa 6655460  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||  ||  ||||||||||||||||||||    
T  6655459 atcgtgtcacatttccccaaaatcgtgtcacgattg 6655424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 36994462 - 36994368
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaaca 109  Q
    |||||||||||||||||| || ||||  |||||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  36994462 agaactctaatcaaagaccctcaacca-aaagttacctcctttgattttccaagtttctctctcttcaacctctccttcaaaatctgcaaagaaca 36994368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 41639166 - 41639033
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||| | ||| ||| ||||||| |||  ||||||||||||| ||||||||| |||||||||||||||||||   |||||| ||||   |||    
T  41639166 caaaatcgtgtcatggttt-cccaaatcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagttgaaa 41639069  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41639068 atcgtgtcacgtttttccaaaatcgtgtcacgattg 41639033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 48142730 - 48142651
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaa 327  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  48142730 ccaaaatcgtgacacgctttccaaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacatacacaacaa 48142651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 10047655 - 10047806
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||     |||    
T  10047655 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttata-----gtc 10047748  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 181  Q
    |||  | |||||||||||||||||||| | || ||||||| |||||||| |||||||||    
T  10047749 ttcaactgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacga 10047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 52095872 - 52095945
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacataca 321  Q
    |||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  52095872 ccaaaatcatgacacgcttgccaaatcgtgtcacgatttctctgcttcccaactttgcaatttgaagacataca 52095945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 38152261 - 38152075
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | || ||||   ||| || ||||||||||||| ||||||  ||||||||||||| || |||||||||||||  ||     
T  38152261 caaagacactcaaccctaaagttacctcatttgtaatccaaattttctctctcttccagctctt-ttcaaaatctgcacaggaacacttatatagcagta 38152163  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |||||||||||||||| ||||| |  ||| ||   ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  38152162 ttcagctgtcaaaatcgtgtcacattttttcaaaat-gtaaaacgattgatgcgtacgatccaaggtacgaccaaccttatccggaaaa 38152075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 27417518 - 27417651
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||||||||||||| ||||||||| ||||||||||||||| |||   |||| | ||||   |||    
T  27417518 caaaatcgtgtcacgattt-cccaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctg-aaaccgtgccgaacaagttgaaa 27417615  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| ||||||||||||||||||||    
T  27417616 atcgtgtcacgttttcccaaaatcgtgtcacgattg 27417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 50674429 - 50674546
Alignment:
Q  149 tttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttc 248  Q
    |||||| ||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||   ||||||||||||  |||||| ||||||| ||| |    
T  50674429 tttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cgtgcccagcaagctgaaaatcatgtcacgttttcc 50674527  T
Q  249 caaaatcgtgtcacgattg 267  Q
    |||||||||  ||||||||    
T  50674528 caaaatcgtaacacgattg 50674546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 31495544 - 31495639
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    ||||||||||||||  ||||||||| |||| || ||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  31495544 ctctaatcaaagactataaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttc-aaatctgcacaagaacactta 31495639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 35662098 - 35661907
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgt 161  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||  |||||| |  |||||||| || ||||| |||| || ||||||    
T  35662098 ccaagtttttctctcttcaacctctccatcaaaatctgcaaagaacacttatatagcagtcttcagttgtcaaaattgtatcacg-ttttgccaaatcgt 35662000  T
Q  162 gccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtca 261  Q
    | |||| ||| ||||||||            |||||||||||||||||||   |||||| |||||| ||||||||| |||  ||| ||||||||||||||    
T  35661999 gacacggttggtgcgtacg------------accaaccttatcctgaaaa-cgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtca 35661913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 40630585 - 40630452
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||| || || ||||||||| ||||||||||| |||||||| | ||| |||||||  |||    
T  40630585 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgt-gcctagcaagctgaaa 40630488  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||| ||| ||||||||||| ||||||||    
T  40630487 atcgtgtcacgttttcccaaaatcgtgacacgattg 40630452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 329
Target Start/End: Original strand, 30000873 - 30001026
Alignment:
Q  184 caaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgatt---ttcca--aaatcgtgtcacga--ttgccaaa-tcg 275  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||   | ||   ||| |   || |||  |  ||||| |||    
T  30000873 caaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattggatgccctgaaaacagctctcgacataaccaaaatcg 30000972  T
Q  276 tgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaatt 329  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  30000973 tgtcacgatttctctgcttcccaactttacaatttgaagacatacacaacaatt 30001026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 5396494 - 5396372
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgc-aaagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||  | ||||||| |   |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||  |||    
T  5396494 caaagacactcaaccctaaagtaacctcctttg-taatccaagtttctctctcttccagctctccttcaaaatctgctcaagaacacttatatagcagtc 5396396  T
Q  124 ttctgc-gtcaaaatcgtgtcacg 146  Q
    ||| || |||||||||||| ||||    
T  5396395 ttcagctgtcaaaatcgtggcacg 5396372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 54882601 - 54882508
Alignment:
Q  173 tgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||| ||||||||| | |||||||||||||||||  | | ||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  54882601 tgcgtacgacccaaggtacgatcaaccttatcctgaaaacgt-gtccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 54882508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 52083160 - 52083221
Alignment:
Q  260 cacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacataca 321  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  52083160 cacgcttgccaaatcgtgtcacgatttctctgcttttcaactttgcaatttgaagacataca 52083221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 52094167 - 52094228
Alignment:
Q  260 cacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacataca 321  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  52094167 cacgcttgccaaatcgtgtcacgatttctctgcttttcaactttgcaatttgaagacataca 52094228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 5048868 - 5048788
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaat 328  Q
    ||||||||||| |||| |||||||||||| ||||||||||||| ||||||| |||| | |||| |||||||||| ||||||    
T  5048868 ccaaaatcgtgacacgcttgccaaatcgtatcacgatttctctacttcccatctttacaatttaaagacatacacaacaat 5048788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 5370591 - 5370650
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaatt 329  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||||||| |||||||    
T  5370591 aaatcgtgtcacgatttttctgcttcccaactttacaatttgaagacatacacaacaatt 5370650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 37229972 - 37230039
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||| ||||||||||||||| | |||||||||||| ||||||| |||||||| |||||||    
T  37229972 ctaatcaaagaccctaaaccctaaagttacctcctttgatttctcaagtttgtctctcttgaagctct 37230039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 46147591 - 46147658
Alignment:
Q  20 ctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||||| |||||||| |||||||    
T  46147591 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctct 46147658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 56179139 - 56179190
Alignment:
Q  270 aaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacataca 321  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  56179139 aaatcgtgtcacgatttctctgctttccaactttgcaatttgaagacataca 56179190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 24969049 - 24968801
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacactt 112  Q
    ||||||||||||||||||  | |||| ||||||| | |||||||||||||||||||| |||||||| ||| |||| |  |||||||| | || |||||||    
T  24969049 agaactctaatcaaagaccgtcaaccttaaagttacctcctttgatttcccaagtttttctctcttgaagttctcataaaaaatctgaacagaaacactt 24968950  T
Q  113 atatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    | |||||   |  |  | ||||| |||||||||||  ||  |  |||| || ||||||||| |||||||| |||| |||| |||||||||||||||||||    
T  24968949 aaatagtacccaacaactgtcaatatcgtgtcacg-attggcaaaatcatgtcacgattgaagcgtacgacccaatgtacgaccaaccttatcctgaaaa 24968851  T
Q  212 ttttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcac 262  Q
       || | |||| || ||| ||||||||||||||   ||||||||||||||    
T  24968850 -cgtgtcaagcatgctaaatatcgtgtcacgattgcacaaaatcgtgtcac 24968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 31985456 - 31985271
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||| ||||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||  |||||||||||||| ||||||||||| ||| | |||    
T  31985456 caaaaacactcaaccctaaagttccctcctttgtaatcc-aagtttctctctcttcaagctc-acttcaaaatctgcacaagaacacttaaatactagtc 31985359  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaacca-accttatcctgaaaa 211  Q
    |||  | |  ||||||||| |||| |||  || ||||||| |||||||||||||||||   |||||||| ||||  ||||||||||||||    
T  31985358 ttcaactgataaaatcgtgccacgattt--ccaaatcgtgtcacgattgatgcgtacgtcacaaggtacgaccagtccttatcctgaaaa 31985271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 45687426 - 45687496
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc 84  Q
    ||||| |||||||||||| || |||||||||||| | |||||||||||||| |||||||||||||| ||||    
T  45687426 agaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagc 45687496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 5396383 - 5396272
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaat 254  Q
    ||||||| |||||||| ||||||||| ||||||||| | |||||||||||||||||   | |||| ||||    |||||||||||||| |||||||||||    
T  5396383 aatcgtggcacgattggtgcgtacgacccaaggtacgatcaaccttatcctgaaaa-catacccaacaagtttgaaaatcgtgtcacgtttttccaaaat 5396285  T
Q  255 cgtgtcacgattg 267  Q
    |||| ||||||||    
T  5396284 cgtgacacgattg 5396272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 11788355 - 11788421
Alignment:
Q  333 tctagtaagttattcttaaagcagcaaatatgatgaaatac---attataggactcatgttgcattc 396  Q
    ||||| |||| ||||||||||||||||||||||||||||||   |||||||||||||||||| ||||    
T  11788355 tctagcaagtgattcttaaagcagcaaatatgatgaaatacttaattataggactcatgttgaattc 11788421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 11800522 - 11800588
Alignment:
Q  333 tctagtaagttattcttaaagcagcaaatatgatgaaatac---attataggactcatgttgcattc 396  Q
    ||||| |||| ||||||||||||||||||||||||||||||   |||||||||||||||||| ||||    
T  11800522 tctagcaagtgattcttaaagcagcaaatatgatgaaatacttaattataggactcatgttgaattc 11800588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 2209266 - 2209188
Alignment:
Q  188 gtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||| ||||||||||||||||||| || ||| ||||| || |||||||||||||| ||  ||||||||||||||||||||    
T  2209266 gtacgaccaaccttatcctgaaaactt-gcctagcaaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattg 2209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 5871758 - 5871684
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| |  |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  5871758 agaactctaatcaaagacccataaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 5871684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 11698332 - 11698394
Alignment:
Q  329 tatgtctagtaagttattcttaaagcagcaaatatgatgaaatacattataggactcatgttg 391  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||| | | ||||||||    
T  11698332 tatgtctagcaagttattcttaaagcagaaaatataatgaaatacattattgaagtcatgttg 11698394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 13009661 - 13009735
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 88  Q
    |||||||||||||||||| || |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  13009661 agaactctaatcaaagacccttaaccctaaagttacctcatttgatttcccaagttttcctctcttgaagttctc 13009735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 42599361 - 42599304
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaatctgcaaag-aacacttatatagt 119  Q
    ||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||    
T  42599361 ccaagtttctctcactaaaagctctccttcaaaatctgcaaagaaacacttatatagt 42599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 52467585 - 52467657
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctc 86  Q
    ||||| |||||||||||| || ||||||||| || | |||||||||| ||| |||||||||||||| ||||||    
T  52467585 agaaccctaatcaaagaccctcaaccctaaaattacctcctttgattaccctagtttctctctcttgaagctc 52467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 28468237 - 28468183
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgattt 286  Q
    ||||||||||||||||||   ||||||||||||||||| |||| ||||||||||||||    
T  28468237 aaaatcgtgtcacgattt---aaaatcgtgtcacgatttccaagtcgtgtcacgattt 28468183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 3910045 - 3909983
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctct 76  Q
    |||||||||||||||| | ||||||||| ||||| | |||||||||||||| ||||| |||||    
T  3910045 agaactctaatcaaaggccctaaacccttaagttacctcctttgatttccctagtttttctct 3909983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 36463639 - 36463705
Alignment:
Q  21 taatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctct 87  Q
    ||||||||||| || || ||||||||| | |||| ||||||||||||||| |||||||| |||||||    
T  36463639 taatcaaagaccctcaatcctaaagttacctcctatgatttcccaagtttttctctcttgaagctct 36463705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 266
Target Start/End: Complemental strand, 3909917 - 3909784
Alignment:
Q  130 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaa 229  Q
    ||||||||| ||||||||||| |   ||||||| |||| |||||||||||||  |||||||| |||||||||||| |  |||   |||| | || |||||    
T  3909917 gtcaaaatcatgtcacgtttt-ctaaaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttatctt--aaaacgtgccaaacatgccaa 3909821  T
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    |||| |||||| | ||| | |||||||||||||||||    
T  3909820 aaatagtgtcatgttttccaaaaatcgtgtcacgatt 3909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 28468124 - 28468087
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  28468124 aaaatcgtgtcacgattttccaagatcgtgtcacgatt 28468087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 50263265 - 50263383
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| || |||| |||  ||| ||||||||| ||||||||| ||||||||||| |||||||  || |||| |||||| |||    
T  50263265 caaaatcgtgtcacgattt-cccaaaccgtgacacatttggtgcgtacga-ccaaggtacgaccaaccttattctgaaaa-cttacccaccaagccgaaa 50263361  T
Q  232 atcgtgtcacgattttccaaaa 253  Q
    ||||||| ||| ||| ||||||    
T  50263362 atcgtgttacgttttcccaaaa 50263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 47038639 - 47038695
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagttt 70  Q
    |||||||||||||||||| || ||||||||||||   |||||||||||||| |||||    
T  47038639 agaactctaatcaaagaccctcaaccctaaagttaactcctttgatttccccagttt 47038695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 18856234 - 18856273
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  18856234 aatcgtgtcacgattccaaaatcgtgtcacgatttctctg 18856273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 18860446 - 18860485
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctg 18860485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 37755166 - 37755220
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctctt 79  Q
    ||||||| || || ||||||||| | ||||||||||| |||||||||||||||||    
T  37755166 caaagactctcaatcctaaagttacctcctttgattttccaagtttctctctctt 37755220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 5112511 - 5112576
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctcct 90  Q
    |||||||||| || |||||| || | |||||||   || |||||||||||||||||||||||||||    
T  5112511 caaagacactcaaacctaaaattacctcctttgtaatctcaagtttctctctcttcaagctctcct 5112576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 18377664 - 18377697
Alignment:
Q  63 ccaagtttctctctcttcaagctctccttcaaaa 96  Q
    |||||||||| |||||||||||||||||||||||    
T  18377664 ccaagtttctttctcttcaagctctccttcaaaa 18377697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 39774022 - 39773981
Alignment:
Q  164 cacgattgatgcgtacgatccaaggtacaaccaaccttatcc 205  Q
    ||||||||||||||| || ||||||||| |||||||||||||    
T  39774022 cacgattgatgcgtatgacccaaggtacgaccaaccttatcc 39773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 48142859 - 48142822
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  48142859 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 48142822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 52083007 - 52083044
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  52083007 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 52083044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 52094014 - 52094051
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  52094014 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 52094051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 3814529 - 3814569
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  3814529 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 3814569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 6376002 - 6375950
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    ||||||| || ||||||||| || | ||||||||||||||||| |||||||||    
T  6376002 caaagaccctcaaccctaaaattacctcctttgatttcccaagattctctctc 6375950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 9223975 - 9223935
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  9223975 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 9223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 9228762 - 9228722
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  9228762 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 9228722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 24742501 - 24742541
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  24742501 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 24742541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 31495756 - 31495792
Alignment:
Q  230 aaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  31495756 aaatcgtgtcacgatttcccacaatcgtgtcacgatt 31495792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 39774117 - 39774053
Alignment:
Q  36 aaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctg 100  Q
    |||||||||||| | |||||||    |||||||||||||||||| || |||| ||||||||||||    
T  39774117 aaccctaaagttacctcctttgtaaacccaagtttctctctctttaaactctacttcaaaatctg 39774053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 45347392 - 45347356
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttct 288  Q
    ||||||||||||||| | |||||||||||||||||||    
T  45347392 aatcgtgtcacgattccaaaatcgtgtcacgatttct 45347356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 51336990 - 51336938
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctc 77  Q
    |||||||| | |||||||||||| |||||||||  |||| |||||||||||||    
T  51336990 caaagacattcaaccctaaagttacttcctttgtattcctaagtttctctctc 51336938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 51520974 - 51521014
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  51520974 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 51521014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 56141587 - 56141547
Alignment:
Q  251 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  56141587 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 56141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 114528 - 114272
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaaga----aca 109  Q
    ||||| |||||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||    |||    
T  114528 agaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctcacattcaaaatctgcaaagatctaaca 114429  T
Q  110 cttatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaa 209  Q
    |||||||||  | |||| || || ||||||||||||||||| |  |||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||    
T  114428 cttatatagcagccttcagcatcgaaatcgtgtcacgttttccatcaatcgtgtcacgagtgatgcgtacgacccaaggtaccaccaaccttatcctgaa 114329  T
Q  210 aattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||||||||| |||||||||||||| ||| |||| ||||||||| |||||    
T  114328 aattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtcatgattg 114272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 114243 - 114165
Alignment:
Q  248 ccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataaca 326  Q
    ||||||||||| |||  |||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  114243 ccaaaatcgtgacacacttgccaaatcttgtcacgatttctctgcttcccaactttgcaatttgaaaacatacacaaca 114165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 20647 - 20897
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttata 115  Q
    |||||||||||||||| || |||||||||||| | ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20647 aactctaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttctctctcttctagctctccttcaaaatctgcaaagaacacttata 20746  T
Q  116 tagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattt 214  Q
    ||   || ||| ||  |||||||||||| ||| |||| || ||||||| |||| ||  ||||||||| ||||||||| ||||||||||| || |||| ||    
T  20747 taacagttttcagctatcaaaatcgtgttacg-ttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattctaaaaactt 20845  T
Q  215 tgcccagcaagccaaaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    | |||| |||||| |||||||||||||| ||| |||||||||||||| |||||    
T  20846 t-cccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcatgattg 20897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 83; Significance: 3e-39; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 267
Target Start/End: Original strand, 2809 - 3009
Alignment:
Q  68 tttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgcca 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||| || || ||||||||||||||||| |||  ||||||| ||    
T  2809 tttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtcca-aatcgtgaca 2907  T
Q  166 cgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacga 264  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||   | |||||||||    ||||||| |||||| ||| ||||||||||| |||||    
T  2908 cgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catacccagcaagtttgaaaatcgggtcacgttttcccaaaatcgtgacacga 3006  T
Q  265 ttg 267  Q
    |||    
T  3007 ttg 3009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 5959 - 6145
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||| ||||||| | |||||||   ||| || ||||||||||||||||||||||||||||||||||| ||||||| ||||||||  |||    
T  5959 caaagacactcaaccataaagttacctcctttgtaatcc-aattttctctctcttcaagctctccttcaaaatctgcacaagaacatttatatagcagtc 6057  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |||||||||||||||||||| | || ||| ||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  6058 ttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 6145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 133102 - 132917
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||| ||| |||||||||||| | |||||||   ||| ||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||  |||    
T  133102 caaagaaactcaaccctaaagttccctcctttgtaatcc-aagtttctctctctttaagctctcctccaaaatttgcacaagaacacttatatagcagtc 133004  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  ||||||||| ||||||||  || ||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  133003 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 149327 - 149382
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtt 69  Q
    |||||||||||||||||| || |||||  ||||| | |||||||||||||||||||    
T  149327 agaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagtt 149382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 36655 - 36470
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||  |||    
T  36655 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttttatagcagtc 36557  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  ||||||||| ||||||||  || |||||||||| ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  36556 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 36470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 43784 - 43599
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||| ||||||||| ||||||||||| || |||||||||||||  ||     
T  43784 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttccagctctcctccaaaatctgcacaaaaacacttatatagcagta 43686  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  ||||||||| ||||||||  || |||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||    
T  43685 ttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaa 43599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 80850 - 80983
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||||  |||||||||||||| |||    
T  80850 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaa 80947  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||| |||| ||| ||||||||||||||||||||    
T  80948 atcgtgccacgttttcccaaaatcgtgtcacgattg 80983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 22280 - 22183
Alignment:
Q  16 aactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||    
T  22280 aactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttctagctcaccttc-aaatctgcacaagaacactta 22183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 267
Target Start/End: Complemental strand, 11159 - 11026
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| |||| |||| |||||||||||||||||||  ||||||||||| || |||    
T  11159 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cttgcccagcaaaccgaaa 11062  T
Q  232 atcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    ||||||||||  ||  ||||||||||||||||||||    
T  11061 atcgtgtcacatttccccaaaatcgtgtcacgattg 11026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 855 - 783
Alignment:
Q  14 agaactctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctc 86  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  855 agaactctaatcaaagaccctaaaccctaaagttgctgcctttgatttcccaagtttctctctcttctagctc 783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 559 - 482
Alignment:
Q  251 aaatcgtgtcacgattgccaaat-cgtgtcacgatttctctgcttcccaactttgctatttgaagacatacataacaat 328  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  559 aaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgcttcccaactttgcaatttgaagtcatacacaacaat 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 85957 - 86096
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||  |||    
T  85957 caaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctcacttcaagctatccttcaaaatctgcacaagaacacttatatagcagtc 86055  T
Q  124 ttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgc 163  Q
    ||| |  ||||||||||||||||||||| ||  ||||||||    
T  86056 ttcagttgtcaaaatcgtgtcacgttttcccaaaatcgtgc 86096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 11396 - 11573
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatat 116  Q
    ||||||||||||||  ||||||||| |||| || ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||||| ||    
T  11396 ctctaatcaaagaccataaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacacttaaat 11494  T
Q  117 agttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaacca 196  Q
    | | | ||||  | |  |||||||||||||| |||  ||  |||||| |||||||| ||||||||  ||||||||| ||||    
T  11495 actagccttccactgataaaatcgtgtcacgattt--ccagatcgtgtcacgattggtgcgtacgtcccaaggtacgacca 11573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 8970 - 9065
Alignment:
Q  18 ctctaatcaaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacactta 113  Q
    |||||||||||||| ||||| |||| |||| || ||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||||    
T  8970 ctctaatcaaagaccctaaagcctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 9065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 266
Target Start/End: Original strand, 45474 - 45713
Alignment:
Q  26 aaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgca-aagaacacttatatagttgtct 124  Q
    ||||||| | |||||||||||| | |||||||   ||| |||||||||||||||||||||||  | |||||| |||| ||||||||||| |||    |||    
T  45474 aaagacattcaaccctaaagttacctcctttgtaatcc-aagtttctctctcttcaagctcttttccaaaatttgcacaagaacacttaaataccaatct 45572  T
Q  125 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagca 223  Q
    || || |  ||||||||| ||||||||  || ||||||| ||||||||||  |||||| ||||||||| ||||||||||||||||||| || | ||||||    
T  45573 tcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaacttag-ccagca 45669  T
Q  224 ag-ccaaaaatcgtgtcacgattttccaaaatcgtgtcacgatt 266  Q
    ||    ||||||||||||||||||  || ||||||| |||||||    
T  45670 agtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatt 45713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 17636 - 17742
Alignment:
Q  156 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaaatcgtgtcacgattttccaaaatc 255  Q
    ||||||| |||| ||| |||||||||  || ||||| |||||||||||| |||||  || ||||||||||||||||||||||||||| ||| ||||||||    
T  17636 aatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagctt-gcccagcaagccaaaaatcgtgtcacgttttcccaaaatc 17734  T
Q  256 gtgtcacg 263  Q
    ||||||||    
T  17735 gtgtcacg 17742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 17562 - 17650
Alignment:
Q  63 ccaagtttctctctctt-caagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgttt 149  Q
    ||||| ||||||||||| |||||| | ||||||||||| ||||||||||||||||||  || ||| || |||||||||||| |||||||    
T  17562 ccaaggttctctctctttcaagctatacttcaaaatctacaaagaacacttatatagcagttttcagctgtcaaaatcgtgacacgttt 17650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 8240 - 8055
Alignment:
Q  25 caaagacactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaa-gaacacttatatagttgtc 123  Q
    |||||||||| |||||||||||| | |||||||   ||| |||||||||||||||| ||||||||| | ||| ||||| | ||||||||| |||   |||    
T  8240 caaagacactcaaccctaaagttccctcctttgtaatcc-aagtttctctctcttccagctctcctccgaaaactgcacacgaacacttaaataccagtc 8142  T
Q  124 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaa 211  Q
    ||| || |  |||||| || |||| |||||   ||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  8141 ttcagctgataaaatcatgccacgattttca--aatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 8055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 6929 - 6817
Alignment:
Q  132 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaagccaaaa 231  Q
    ||||||||| ||||||||| | | ||||||| || | ||| ||||||||| |||||||||||||||||||||||||||||  || || ||||||   |||    
T  6929 caaaatcgtatcacgttttccacaaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtt-cctagcaagttgaaa 6831  T
Q  232 atcgtgtcacgatt 245  Q
    ||||||||||||||    
T  6830 atcgtgtcacgatt 6817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 1300 - 1193
Alignment:
Q  159 cgtgccacgattgatgcgtacgatccaaggtacaaccaaccttatcctgaaaattttgcccagcaag-ccaaaaatcgtgtcacgattttccaaaatcgt 257  Q
    ||||||||||||||| ||||||| | ||||||| |||||||||||||||||||  ||  ||||||||   |||||||||||||||||||  |||||||||    
T  1300 cgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaa-cttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgt 1202  T
Q  258 gtcacgatt 266  Q
      |||||||    
T  1201 accacgatt 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 1173 - 1120
Alignment:
Q  238 tcacgattttccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||| || |||||||||||||||||  | ||||||||||||||||| ||||    
T  1173 tcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctg 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 6217 - 6154
Alignment:
Q  17 actctaatcaaaga-cactaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 80  Q
    |||||||||||||| | |||||||||| ||||||  ||||||||||||||||| |||||||||||    
T  6217 actctaatcaaagaaccctaaaccctagagttgcc-cctttgatttcccaagtctctctctcttc 6154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 1784 - 1745
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctg 1745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 870 - 909
Alignment:
Q  252 aatcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  870 aatcgtgtcacgattccaaaatcgtgtcacgatttctctg 909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 1813 - 1775
Alignment:
Q  253 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  1813 atcgtgtcacgattgccaaatcgtgacacgattcctctg 1775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 25570 - 25532
Alignment:
Q  229 aaaatcgtgtcacgattttccaaaatcgtgtcacgattg 267  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  25570 aaaatcgtgtcacgattggccaaaatcgtgtcacgattg 25532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 148518 - 148480
Alignment:
Q  253 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 291  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  148518 atcgtgtcacgattgccaaatcgtgacacgattcctctg 148480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University