View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13441_high_2 (Length: 726)

Name: NF13441_high_2
Description: NF13441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13441_high_2
NF13441_high_2
[»] chr8 (42 HSPs)
chr8 (15-707)||(1423706-1424390)
chr8 (524-667)||(1977210-1977353)
chr8 (504-660)||(24055942-24056098)
chr8 (528-661)||(8903858-8903991)
chr8 (524-667)||(16983394-16983537)
chr8 (527-625)||(8914813-8914911)
chr8 (524-622)||(17499270-17499368)
chr8 (531-625)||(35797437-35797531)
chr8 (524-667)||(28413906-28414049)
chr8 (532-620)||(9952802-9952890)
chr8 (530-662)||(32072102-32072234)
chr8 (524-667)||(34861229-34861365)
chr8 (524-667)||(43506538-43506678)
chr8 (504-577)||(6098794-6098867)
chr8 (526-667)||(35151768-35151909)
chr8 (524-667)||(5979880-5980022)
chr8 (534-619)||(17741574-17741659)
chr8 (195-306)||(10711976-10712088)
chr8 (533-625)||(23685173-23685265)
chr8 (529-625)||(45246476-45246572)
chr8 (530-625)||(31301157-31301251)
chr8 (534-662)||(11962729-11962856)
chr8 (504-607)||(36804856-36804959)
chr8 (524-658)||(41727439-41727573)
chr8 (524-577)||(7493379-7493432)
chr8 (534-625)||(4674952-4675039)
chr8 (524-662)||(6387568-6387705)
chr8 (524-599)||(14236406-14236481)
chr8 (534-620)||(4319780-4319866)
chr8 (542-612)||(9192056-9192126)
chr8 (559-625)||(35689522-35689588)
chr8 (557-622)||(1961327-1961392)
chr8 (504-553)||(5095777-5095826)
chr8 (524-620)||(13407360-13407457)
chr8 (537-606)||(34952504-34952573)
chr8 (558-662)||(43026298-43026400)
chr8 (534-622)||(9193427-9193515)
chr8 (246-306)||(44420639-44420699)
chr8 (558-625)||(1205869-1205936)
chr8 (524-610)||(25915086-25915175)
chr8 (534-601)||(35819198-35819265)
chr8 (246-295)||(16985659-16985708)
[»] chr3 (54 HSPs)
chr3 (524-667)||(41451932-41452075)
chr3 (524-667)||(24734705-24734848)
chr3 (524-667)||(28529253-28529394)
chr3 (524-667)||(20493482-20493625)
chr3 (524-667)||(37776740-37776883)
chr3 (524-667)||(46450067-46450209)
chr3 (524-667)||(46160949-46161090)
chr3 (524-623)||(29588770-29588869)
chr3 (524-625)||(18427187-18427288)
chr3 (504-667)||(48351436-48351599)
chr3 (511-625)||(38414689-38414803)
chr3 (524-625)||(20791338-20791439)
chr3 (504-607)||(2419481-2419584)
chr3 (516-658)||(8825008-8825150)
chr3 (524-667)||(5452099-5452240)
chr3 (525-625)||(22604602-22604702)
chr3 (524-661)||(55452052-55452187)
chr3 (534-619)||(19345047-19345132)
chr3 (524-660)||(50156697-50156831)
chr3 (531-667)||(29755500-29755636)
chr3 (524-608)||(52123993-52124077)
chr3 (524-625)||(14236061-14236162)
chr3 (233-306)||(50056893-50056966)
chr3 (536-624)||(26310495-26310583)
chr3 (516-603)||(10948589-10948676)
chr3 (524-662)||(27243050-27243189)
chr3 (524-586)||(24429062-24429124)
chr3 (218-306)||(28095952-28096039)
chr3 (559-669)||(30624631-30624739)
chr3 (518-569)||(38138613-38138664)
chr3 (524-662)||(41387568-41387704)
chr3 (534-608)||(49072064-49072138)
chr3 (516-654)||(138778-138914)
chr3 (550-625)||(7419241-7419316)
chr3 (524-619)||(15790407-15790501)
chr3 (535-578)||(22856282-22856325)
chr3 (524-622)||(44844026-44844125)
chr3 (534-624)||(50661568-50661659)
chr3 (524-598)||(752461-752535)
chr3 (527-577)||(29388634-29388684)
chr3 (529-603)||(39186028-39186102)
chr3 (524-578)||(43016502-43016556)
chr3 (194-240)||(50057279-50057325)
chr3 (530-662)||(13809087-13809219)
chr3 (538-656)||(40702173-40702289)
chr3 (538-625)||(41707490-41707577)
chr3 (558-625)||(43657067-43657134)
chr3 (161-240)||(50057409-50057488)
chr3 (259-306)||(50061382-50061429)
chr3 (524-566)||(742057-742099)
chr3 (504-661)||(40715879-40716036)
chr3 (534-579)||(41607499-41607544)
chr3 (540-625)||(42340873-42340958)
chr3 (584-625)||(46237143-46237184)
[»] chr6 (24 HSPs)
chr6 (524-662)||(34905341-34905479)
chr6 (527-619)||(16852013-16852105)
chr6 (517-657)||(10133188-10133328)
chr6 (524-667)||(445818-445961)
chr6 (526-625)||(5106340-5106439)
chr6 (524-659)||(31116161-31116296)
chr6 (524-625)||(21987334-21987435)
chr6 (524-657)||(1392640-1392770)
chr6 (534-619)||(32122843-32122928)
chr6 (504-625)||(32598965-32599086)
chr6 (504-620)||(32112734-32112850)
chr6 (533-620)||(12780805-12780892)
chr6 (530-607)||(12784982-12785059)
chr6 (524-625)||(2675937-2676038)
chr6 (524-578)||(16187469-16187523)
chr6 (524-578)||(16187687-16187741)
chr6 (534-662)||(35128769-35128898)
chr6 (524-625)||(19090251-19090353)
chr6 (516-573)||(17144700-17144757)
chr6 (524-557)||(34882267-34882300)
chr6 (524-667)||(12753797-12753940)
chr6 (524-579)||(8441886-8441941)
chr6 (524-579)||(8450690-8450745)
chr6 (634-667)||(12753758-12753791)
[»] chr4 (49 HSPs)
chr4 (504-624)||(39471200-39471320)
chr4 (516-661)||(43771132-43771277)
chr4 (524-664)||(20454543-20454681)
chr4 (526-658)||(10169684-10169814)
chr4 (524-662)||(8108961-8109099)
chr4 (525-667)||(50164395-50164537)
chr4 (524-625)||(722199-722300)
chr4 (524-625)||(47009231-47009332)
chr4 (524-667)||(33653526-33653669)
chr4 (531-667)||(49077249-49077385)
chr4 (524-625)||(754617-754718)
chr4 (529-667)||(20225383-20225519)
chr4 (526-620)||(24834625-24834719)
chr4 (524-667)||(26361345-26361480)
chr4 (504-625)||(24938432-24938553)
chr4 (526-625)||(50481584-50481683)
chr4 (524-625)||(49242212-49242313)
chr4 (518-624)||(22542424-22542530)
chr4 (504-657)||(19937189-19937341)
chr4 (524-625)||(34129437-34129538)
chr4 (504-625)||(52671872-52671993)
chr4 (504-625)||(37451030-37451149)
chr4 (527-625)||(48339380-48339478)
chr4 (532-625)||(38636379-38636472)
chr4 (528-619)||(31250924-31251015)
chr4 (534-620)||(38537560-38537649)
chr4 (528-617)||(45310989-45311078)
chr4 (246-306)||(11393149-11393209)
chr4 (246-306)||(11402876-11402936)
chr4 (524-667)||(40991626-40991769)
chr4 (543-658)||(46242000-46242113)
chr4 (534-625)||(5044587-5044678)
chr4 (534-625)||(49682838-49682929)
chr4 (546-661)||(50571870-50571985)
chr4 (524-570)||(11895134-11895180)
chr4 (504-625)||(13069983-13070104)
chr4 (504-625)||(25719129-25719251)
chr4 (524-625)||(51206085-51206187)
chr4 (532-609)||(13520007-13520084)
chr4 (534-626)||(18421878-18421968)
chr4 (584-625)||(21776942-21776983)
chr4 (537-658)||(33995985-33996106)
chr4 (558-667)||(47237812-47237921)
chr4 (554-625)||(30866999-30867070)
chr4 (526-621)||(50652375-50652470)
chr4 (526-608)||(46536301-46536383)
chr4 (526-576)||(52279298-52279348)
chr4 (535-576)||(46287532-46287573)
chr4 (584-625)||(48608122-48608163)
[»] chr1 (50 HSPs)
chr1 (485-625)||(32211786-32211922)
chr1 (524-667)||(41958085-41958226)
chr1 (524-667)||(26980299-26980442)
chr1 (509-619)||(33193098-33193208)
chr1 (524-625)||(30678948-30679049)
chr1 (524-625)||(41948183-41948284)
chr1 (524-625)||(19101638-19101739)
chr1 (524-667)||(2225226-2225367)
chr1 (532-667)||(6325858-6325990)
chr1 (527-667)||(11987626-11987766)
chr1 (532-625)||(1093118-1093211)
chr1 (526-619)||(39499442-39499535)
chr1 (486-667)||(6133628-6133804)
chr1 (524-616)||(8899065-8899157)
chr1 (533-625)||(22540410-22540502)
chr1 (527-608)||(10659808-10659889)
chr1 (524-661)||(28218085-28218222)
chr1 (523-667)||(3872670-3872813)
chr1 (533-625)||(15523252-15523344)
chr1 (533-625)||(15531246-15531338)
chr1 (516-572)||(37552978-37553034)
chr1 (504-667)||(8741240-8741405)
chr1 (536-625)||(49730906-49730995)
chr1 (504-656)||(51732290-51732440)
chr1 (516-622)||(31866361-31866466)
chr1 (524-618)||(33114020-33114114)
chr1 (509-561)||(16948551-16948603)
chr1 (524-620)||(29673522-29673618)
chr1 (529-625)||(37525571-37525667)
chr1 (526-667)||(931374-931515)
chr1 (528-625)||(15468262-15468359)
chr1 (541-622)||(46335142-46335223)
chr1 (259-306)||(1286185-1286232)
chr1 (532-611)||(45179291-45179370)
chr1 (524-625)||(13114706-13114808)
chr1 (524-625)||(41918037-41918139)
chr1 (524-625)||(15928597-15928698)
chr1 (504-620)||(15906458-15906573)
chr1 (534-625)||(29418523-29418615)
chr1 (530-662)||(35336871-35336997)
chr1 (524-619)||(39974237-39974326)
chr1 (524-579)||(12767365-12767420)
chr1 (528-575)||(15906632-15906679)
chr1 (534-577)||(44272008-44272051)
chr1 (534-625)||(50539166-50539257)
chr1 (524-625)||(11135781-11135883)
chr1 (584-625)||(15660935-15660976)
chr1 (526-599)||(27570293-27570366)
chr1 (504-553)||(33113990-33114039)
chr1 (524-577)||(47644334-47644387)
[»] chr2 (39 HSPs)
chr2 (504-625)||(44274276-44274397)
chr2 (526-625)||(9470123-9470222)
chr2 (524-667)||(26767798-26767941)
chr2 (504-662)||(6980137-6980295)
chr2 (524-667)||(12989191-12989334)
chr2 (504-667)||(45554567-45554722)
chr2 (504-620)||(25238294-25238411)
chr2 (512-661)||(34142164-34142313)
chr2 (528-599)||(7919311-7919382)
chr2 (526-625)||(19639135-19639234)
chr2 (526-625)||(19837728-19837827)
chr2 (524-657)||(35316438-35316569)
chr2 (557-657)||(2476546-2476644)
chr2 (524-625)||(11539465-11539569)
chr2 (516-620)||(12098895-12099000)
chr2 (528-608)||(38464222-38464302)
chr2 (524-603)||(10981582-10981661)
chr2 (533-667)||(18511255-18511389)
chr2 (516-588)||(472192-472264)
chr2 (504-662)||(16719447-16719605)
chr2 (518-620)||(30849284-30849386)
chr2 (534-624)||(32701513-32701603)
chr2 (534-620)||(37652292-37652378)
chr2 (534-658)||(17188076-17188198)
chr2 (524-667)||(32856172-32856319)
chr2 (524-657)||(36471875-36472008)
chr2 (524-572)||(4552877-4552925)
chr2 (198-301)||(25476329-25476432)
chr2 (512-574)||(14489564-14489626)
chr2 (532-598)||(15884498-15884564)
chr2 (233-306)||(17508848-17508921)
chr2 (524-620)||(43414402-43414498)
chr2 (524-625)||(28898073-28898175)
chr2 (584-625)||(41805873-41805914)
chr2 (524-662)||(24895303-24895440)
chr2 (504-554)||(25730456-25730506)
chr2 (534-572)||(30718374-30718412)
chr2 (528-625)||(42182931-42183029)
chr2 (246-306)||(38500219-38500282)
[»] chr7 (44 HSPs)
chr7 (524-669)||(46517291-46517434)
chr7 (524-612)||(27888337-27888425)
chr7 (527-667)||(31502504-31502644)
chr7 (524-667)||(32205079-32205219)
chr7 (524-667)||(22189939-22190082)
chr7 (516-657)||(7459353-7459494)
chr7 (486-620)||(25686838-25686968)
chr7 (519-667)||(33008104-33008252)
chr7 (526-625)||(7775042-7775140)
chr7 (524-662)||(12263473-12263611)
chr7 (524-658)||(27949282-27949416)
chr7 (516-608)||(6442224-6442316)
chr7 (524-667)||(14795131-14795274)
chr7 (524-667)||(15242123-15242266)
chr7 (524-622)||(32212907-32213004)
chr7 (524-625)||(11692221-11692322)
chr7 (524-625)||(11824113-11824214)
chr7 (524-667)||(48374476-48374617)
chr7 (528-611)||(23564076-23564159)
chr7 (524-661)||(19422871-19423008)
chr7 (516-662)||(39254088-39254234)
chr7 (526-652)||(32178843-32178966)
chr7 (197-282)||(39364335-39364420)
chr7 (524-625)||(44350839-44350940)
chr7 (518-622)||(10933996-10934100)
chr7 (556-667)||(12270988-12271096)
chr7 (534-658)||(25092708-25092832)
chr7 (524-625)||(24539159-24539261)
chr7 (532-577)||(36845567-36845612)
chr7 (534-625)||(19494385-19494477)
chr7 (550-658)||(44510999-44511107)
chr7 (524-625)||(17749736-17749838)
chr7 (509-566)||(1316374-1316431)
chr7 (524-577)||(6580039-6580092)
chr7 (566-667)||(8073367-8073468)
chr7 (532-609)||(9648982-9649059)
chr7 (526-562)||(36845530-36845566)
chr7 (516-555)||(12167319-12167358)
chr7 (524-622)||(17354563-17354662)
chr7 (524-602)||(1688048-1688126)
chr7 (524-625)||(25428515-25428617)
chr7 (524-566)||(31874117-31874159)
chr7 (528-577)||(3855851-3855900)
chr7 (524-608)||(13919839-13919924)
[»] chr5 (34 HSPs)
chr5 (524-667)||(10142013-10142154)
chr5 (524-667)||(28490759-28490902)
chr5 (525-618)||(39246657-39246750)
chr5 (527-625)||(34368402-34368500)
chr5 (524-625)||(5413774-5413875)
chr5 (516-625)||(25710501-25710610)
chr5 (526-661)||(28090268-28090401)
chr5 (526-625)||(17537141-17537240)
chr5 (532-625)||(41330438-41330531)
chr5 (526-625)||(43405435-43405534)
chr5 (527-625)||(27592492-27592590)
chr5 (524-626)||(37455390-37455491)
chr5 (524-625)||(30325911-30326012)
chr5 (532-622)||(28434863-28434951)
chr5 (524-624)||(41105607-41105707)
chr5 (528-667)||(28611819-28611958)
chr5 (516-622)||(34384720-34384826)
chr5 (161-308)||(1678916-1679066)
chr5 (532-620)||(1923597-1923685)
chr5 (526-662)||(25630812-25630948)
chr5 (534-577)||(31885878-31885921)
chr5 (516-618)||(10666717-10666819)
chr5 (526-659)||(17434888-17435019)
chr5 (531-624)||(28155746-28155837)
chr5 (524-625)||(42224627-42224729)
chr5 (524-575)||(28223813-28223864)
chr5 (534-577)||(36337937-36337980)
chr5 (530-608)||(10950145-10950223)
chr5 (534-608)||(25919270-25919344)
chr5 (524-577)||(14553602-14553655)
chr5 (562-623)||(43541895-43541956)
chr5 (524-623)||(24915099-24915199)
chr5 (526-620)||(2525621-2525715)
chr5 (534-588)||(4427321-4427375)
[»] scaffold0018 (1 HSPs)
scaffold0018 (516-621)||(27858-27963)
[»] scaffold0204 (1 HSPs)
scaffold0204 (527-625)||(26902-27000)
[»] scaffold0543 (1 HSPs)
scaffold0543 (530-625)||(9706-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (530-625)||(11252-11347)
[»] scaffold0245 (1 HSPs)
scaffold0245 (259-306)||(12452-12499)
[»] scaffold0118 (1 HSPs)
scaffold0118 (247-306)||(18936-18995)


Alignment Details
Target: chr8 (Bit Score: 532; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 15 - 707
Target Start/End: Complemental strand, 1424390 - 1423706
Alignment:
Q  15 gatgaacagtggcgtactacggaaagtgcactcggaatgaacagtacttgcgataaacagtttgcatggtgaatagtgttttctaatgaacagggctttt 114  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1424390 gatgaacagtggcgcactatggaaagtgcactcgaaatgaacagtacttgcgataaacagtgtgcatggtgaatagtgttttctaatgaacagggctttt 1424291  T
Q  115 aggatctcaaagagtccgcgatgaaggcaaaaactcacaataaagacgaaaaaagcaaaagtaattgcaaggactgcaactagggtttatgcggaaacaa 214  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||    
T  1424290 aggatctcaaagagtccgcgatgaacgcataaactcacaataaagacgaaaaaagcaaaagtaaccgaaag-actgcaactagggtttatgcggaaacaa 1424192  T
Q  215 gaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatatatataggga 314  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||  ||||    
T  1424191 gacctcccaagatcgggagctctgatgccacgtgaaaactaaacattatatttcagagacaaaaaatgtacaactactaatgtgtttatatata--ggga 1424094  T
Q  315 tccagctccccaagaaatattcattttgctactagcagggggaaaatattcatacggagataaaaaa-tagctataatcattttgctactggcaggggag 413  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  1424093 tccagctctccaagaaatattcattttgctactagcaggggaaaaatattcatacggagataaaaaaatagctataatcattttgctactagcaggggag 1423994  T
Q  414 tatgttattcttgtcataggattgaactgaaatcggcaaagctttataagagtatttattgtccctaattaattagcaacactctcttaattttaaacat 513  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1423993 tatgttattcttgtcataggattgaactgaaatcggcaaagctttataagagtacttattgtccctaattaattagcaacactctcttaattttaaacat 1423894  T
Q  514 tttctttaaaactcactctcttattggtttaaatcattgtggat---ctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 610  Q
    ||||| ||||| ||| ||||||||         ||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1423893 tttctctaaaattcattctcttat---------tcattgtgggtctactacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 1423803  T
Q  611 tctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctagtattcatggaacatgttacatatatattggatctttgatctttct 707  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1423802 tctaataaaagagtgtaaatactaaagagtgttgaaaagtgagtgttgctagtattcatggaacatgtcacatatatattggatctttgatctttct 1423706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 1977210 - 1977353
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||| || | |||||    
T  1977210 actcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttggacatacattgatttcatccaacagaagag 1977309  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | ||  |||||||||| |||||||||| ||||||| ||||    
T  1977310 tg--agtgctagagagagtgttaaaaagtgagtattgctagcattc 1977353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 504 - 660
Target Start/End: Original strand, 24055942 - 24056098
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||| ||||| ||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||   |||||||||| |||||||||||    
T  24055942 ttttgaacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacatacatt 24056041  T
Q  604 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgct 660  Q
     |||| |||| ||||||||| |  | | ||  |||||| ||||||||||||||||||||    
T  24056042 aatttcatctgataaaagagcg--agtgctaaagagagcgttgaaaagtgagtgttgct 24056098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 528 - 661
Target Start/End: Complemental strand, 8903991 - 8903858
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgta 627  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||  ||||      
T  8903991 actctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttcatcaaataaacaagtg-- 8903894  T
Q  628 aatact--agagagtgttgaaaagtgagtgttgcta 661  Q
    | ||||  ||||||||||||||| ||||||||||||    
T  8903893 agtactagagagagtgttgaaaaatgagtgttgcta 8903858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 16983537 - 16983394
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |  |||||||| | ||||||| | |||||||||| ||||||  ||    
T  16983537 actcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtgatgggacataaaatgattttatccaataaatcag 16983438  T
Q  624 tgtaaatactag--agagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | ||||  ||||||||||||||||||||||||||| ||||    
T  16983437 tg--agtgctagatagagtgttgaaaagtgagtgttgctagcattc 16983394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 527 - 625
Target Start/End: Complemental strand, 8914911 - 8914813
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||| |||||||||||| ||||||| ||| ||||||||    
T  8914911 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtg 8914813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 524 - 622
Target Start/End: Original strand, 17499270 - 17499368
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| |||| ||||||| |||||||| ||| |||||||||    
T  17499270 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcatccaataaaaga 17499368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 531 - 625
Target Start/End: Complemental strand, 35797531 - 35797437
Alignment:
Q  531 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||||  |||||||||| | |||||||||||||||||| ||||||||||||    
T  35797531 ctcttattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacatacattgattttatccaataaaagagtg 35797437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 28413906 - 28414049
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||| ||| |||||||||||||||||| ||| |||| ||||||||||||||||||  |||||||||| |||||||||||||||| ||| ||||||| ||    
T  28413906 actcattcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaaaaag 28414005  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||        ||||||||||||||||||||||||| ||| ||||    
T  28414006 tgagcgctagagagagtgttgaaaagtgagtgttgttagcattc 28414049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 532 - 620
Target Start/End: Original strand, 9952802 - 9952890
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||  |||||||||| |||||| ||||||||| ||| |||||||    
T  9952802 tcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggtgggacatgcattgatttcatccaataaaa 9952890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 530 - 662
Target Start/End: Complemental strand, 32072234 - 32072102
Alignment:
Q  530 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaa 629  Q
    |||||||||| ||||||| ||||||| |||||||||| |||||||||| |  |||||||||| ||||||||||| |||| ||| ||||||||||||  |     
T  32072234 tctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattcatttcatccaataaaagagtg--ag 32072137  T
Q  630 tact--agagagtgttgaaaagtgagtgttgctag 662  Q
    | ||  ||||||||||||||||||| |||||||||    
T  32072136 tgctagagagagtgttgaaaagtgaatgttgctag 32072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 34861229 - 34861365
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||| |||||||      ||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||||||    
T  34861229 actcactctcttattggtttaaattattgtggg-----actttgaaaattgaacctacacaaagtggtgggacatacattgatttcatccaataaaagag 34861323  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | |||||||||||||||||||||| | |||||| ||||    
T  34861324 tg--agtgctagagagtgttgaaaagtgagaggtgctagcattc 34861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 43506678 - 43506538
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||| | |||| |  |||||||||| | ||||||||||||| |||| ||||||| ||    
T  43506678 actcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatccaataaaa-ag 43506580  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | |  ||||||||||| |||||||||||||||||| ||||    
T  43506579 tg--agtgttagagagtgttcaaaagtgagtgttgctagcattc 43506538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 6098794 - 6098867
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6098794 ttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaac 6098867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 667
Target Start/End: Original strand, 35151768 - 35151909
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||| ||||||| |||| ||| ||||||| |||||||||| |||||||||  |  ||||| |||| |||||||||||||||| ||| |||||||||||     
T  35151768 tcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatggtgggacatacattgatttcatccaataaaagagt- 35151866  T
Q  626 taaatactaga--gagtgttgaaaagtgagtgttgctagtattc 667  Q
     |||| ||| |  ||||||| |||||||||||||||||||||||    
T  35151867 -aaatgctaaaaagagtgttaaaaagtgagtgttgctagtattc 35151909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 5980022 - 5979880
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||||||| ||| |||||||  |  |||||||||||||||||| |  |||||||||| |||||||||||||| | ||| |||| |||||    
T  5980022 actcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagtggtgggacatacattgatctcatccaatagaagag 5979924  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |||  |    ||||||||||||||||| ||||||||||| ||||    
T  5979923 tgtctactagagagagtgttgaaaagtaagtgttgctagcattc 5979880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 619
Target Start/End: Original strand, 17741574 - 17741659
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    ||||||||||||| |||| | | |||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||| ||||||    
T  17741574 ttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcatccaataaa 17741659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 10712088 - 10711976
Alignment:
Q  195 tagggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaa-aatgcacaactacta 293  Q
    ||||||||||||||||||||||| |||||||||   ||| |||||||||| ||||||||| || ||||||| |||||||||||| |||| | | | ||||    
T  10712088 tagggtttatgcggaaacaagactccccaagattgagagttctgatgccatgtgaaaactgaatattatatgtcagagataaaataatgtatatccacta 10711989  T
Q  294 atgtgtttatata 306  Q
    |||| ||||||||    
T  10711988 atgtatttatata 10711976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 533 - 625
Target Start/End: Complemental strand, 23685265 - 23685173
Alignment:
Q  533 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||| | |||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  23685265 cttattggtttaaatcattgcgaatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 23685173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 625
Target Start/End: Complemental strand, 45246572 - 45246476
Alignment:
Q  529 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||||||||||| ||||||| ||||    
T  45246572 ctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtg 45246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 530 - 625
Target Start/End: Complemental strand, 31301251 - 31301157
Alignment:
Q  530 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||| ||| || |||||||| |||||||| ||||||  |||||||||| | |||||||||||||| ||| ||||||||||||    
T  31301251 tctcttattggtttaaattattatg-atctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtg 31301157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 662
Target Start/End: Original strand, 11962729 - 11962856
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 633  Q
    |||||||||||||||||| |||||||||||||||||||||||||    | ||| |||| ||| |||| ||||||||||  ||||||||||||   ||       
T  11962729 ttattggtttaaatcatt-tggatctacactttgaaaattgaacctacataaaatggtgggatatactttgattttattcaataaaagagtgagtattaa 11962827  T
Q  634 agagagtgttgaaaagtgagtgttgctag 662  Q
    |||| |||||||||||||||||| |||||    
T  11962828 agagcgtgttgaaaagtgagtgtcgctag 11962856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 504 - 607
Target Start/End: Original strand, 36804856 - 36804959
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||||| ||| ||| ||| |||||||||||| ||||||| ||||||||| || | |||||||||||||| |  ||||| |||| |||||||||||    
T  36804856 ttttcaacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgggacatacatt 36804955  T
Q  604 gatt 607  Q
    ||||    
T  36804956 gatt 36804959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 524 - 658
Target Start/End: Complemental strand, 41727573 - 41727439
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||| ||||||||||||||| ||  ||||||| || ||||  ||||    |||||| ||| ||||||||||||||||||||||| |||||||    
T  41727573 actcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacatacattgattttatctaacaaaagag 41727474  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttg 658  Q
    ||  | | ||  |||||||||| ||||||||||||||    
T  41727473 tg--attgctaaagagagtgttcaaaagtgagtgttg 41727439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 577
Target Start/End: Original strand, 7493379 - 7493432
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  7493379 actcactctcttattggtttaaatcattgtgagtctacactttgaaaatagaac 7493432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 625
Target Start/End: Complemental strand, 4675039 - 4674952
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||   |||||||||||||||| |||||  |||||||| | ||    |||||||||| ||||||||||||||||    
T  4675039 ttattggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgatagg----acattgatttcatctaataaaagagtg 4674952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 662
Target Start/End: Complemental strand, 6387705 - 6387568
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||| ||||||||||| ||||| || ||||| || || |||||| |||| |||| |  | ||| |||| |||||||||||||||||||| |||||||||    
T  6387705 actcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaaga 6387606  T
Q  623 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 662  Q
    |||  | |  ||||||||||  ||||| ||||||||||||    
T  6387605 gtg--agtgttagagagtgtccaaaagagagtgttgctag 6387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 599
Target Start/End: Complemental strand, 14236481 - 14236406
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 599  Q
    |||||||||||| ||||||||||| ||||||   ||||||||| |||||||||||   |||||||||| |||||||    
T  14236481 actcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacata 14236406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 534 - 620
Target Start/End: Original strand, 4319780 - 4319866
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    |||||| ||||||| | ||| | ||||||||||||||||| || ||  |||||||| |  ||||| |||||||||||||||||||||    
T  4319780 ttattgatttaaattagtgtaggtctacactttgaaaattaaattcacacaaagtgatgagacatgcattgattttatctaataaaa 4319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 612
Target Start/End: Complemental strand, 9192126 - 9192056
Alignment:
Q  542 ttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatc 612  Q
    |||||||||||||  |||||| ||| |||||||||| |  |||||||||| ||| ||||||||||||||||    
T  9192126 ttaaatcattgtgagtctacaatttaaaaattgaacccacacaaagtggtgggatatacattgattttatc 9192056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 625
Target Start/End: Complemental strand, 35689588 - 35689522
Alignment:
Q  559 tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  35689588 tacactttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtg 35689522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 622
Target Start/End: Complemental strand, 1961392 - 1961327
Alignment:
Q  557 tctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||||||||||||||| |   ||||||||| |||| ||| ||||||||||| |||||||||    
T  1961392 tctacactttgaaaattgaacccacgcaaagtggtgggacgtaccttgattttatccaataaaaga 1961327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 5095777 - 5095826
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt 553  Q
    ||||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  5095777 ttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 620
Target Start/End: Original strand, 13407360 - 13407457
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    ||||| ||||| ||||| |||||||| ||||| || |||||||||||||| |||| |    ||| |||| |||||||||||||||||||| |||||||    
T  13407360 actcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatggtgggacatacattgattttatccaataaaa 13407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 606
Target Start/End: Complemental strand, 34952573 - 34952504
Alignment:
Q  537 ttggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgat 606  Q
    |||||||||||||||| || ||||||  |||||||||||| ||  ||||| |||| ||||||||||||||    
T  34952573 ttggtttaaatcattgcgggtctacatattgaaaattgaaatcccacaaaatggtgggacatacattgat 34952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 662
Target Start/End: Complemental strand, 43026400 - 43026298
Alignment:
Q  558 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 657  Q
    |||||||||| |||| |||| |  | |||||||  |||||||||||||||||| ||||||||| ||||  | | |||||||||||| ||||| || ||||    
T  43026400 ctacactttggaaatggaacccacataaagtggcaggacatacattgattttacctaataaaaaagtg--agtgctagagagtgtttaaaagagaatgtt 43026303  T
Q  658 gctag 662  Q
    |||||    
T  43026302 gctag 43026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 622
Target Start/End: Complemental strand, 9193515 - 9193427
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||   ||||||| ||  |||||||| | |||| ||| |||||||||    
T  9193515 ttattggttttaattattgtaggtctacactttgaaaattgaacttacacaaagtagtgagacatacactaatttcatcaaataaaaga 9193427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 44420699 - 44420639
Alignment:
Q  246 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||| || |||||||||||||||||||  ||  ||||| |||||||||||||||||    
T  44420699 gtgaaaactgaatattatatttcagagataaatgatatacaaccactaatgtgtttatata 44420639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 625
Target Start/End: Complemental strand, 1205936 - 1205869
Alignment:
Q  558 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||| |||| |||| | || ||||||||  |||||||||| |||||| ||||||||||||||    
T  1205936 ctacactttggaaatagaacccatataaagtggtgagacatacattaattttacctaataaaagagtg 1205869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 610
Target Start/End: Complemental strand, 25915175 - 25915086
Alignment:
Q  524 actcactctcttattggtttaaatcattgtgga---tctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 610  Q
    ||||||||| ||||||| | |||||| ||||||   |||||||||||||||| |||| |  | ||||| || ||||||||||||||||||    
T  25915175 actcactcttttattgggtgaaatcaatgtggaacctctacactttgaaaatggaacccaaataaagtagtaggacatacattgatttta 25915086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 601
Target Start/End: Complemental strand, 35819265 - 35819198
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacataca 601  Q
    ||||| |||||||||||||||| |||| |||||||||||||| | |  ||||| |||| |||||||||    
T  35819265 ttattagtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacataca 35819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 16985659 - 16985708
Alignment:
Q  246 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaat 295  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||||||    
T  16985659 gtgaaaactgaatattatatttcagagataaataatgtacaaccactaat 16985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 41451932 - 41452075
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |  |||||||||| |||||||| ||||||| ||| ||||||||||    
T  41451932 actcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagag 41452031  T
Q  624 tgtaaatactagaga--gtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | |||||||||  |||||||||||||||||||||||||||||    
T  41452032 tg--agtactagagattgtgttgaaaagtgagtgttgctagtattc 41452075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 24734848 - 24734705
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |  |||||||||| |||||||| ||||||| ||| ||||||||||    
T  24734848 actcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagag 24734749  T
Q  624 tgtaaatactagaga--gtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | |||||||||  |||||||||||||||||||||||||||||    
T  24734748 tg--agtactagagattgtgttgaaaagtgagtgttgctagtattc 24734705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 28529394 - 28529253
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| |||||||||||||||| ||| ||||||||||    
T  28529394 actcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccc--acacagtggtgggacatacattgatttcatccaataaaagag 28529297  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  28529296 tg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 28529253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 20493482 - 20493625
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |  |||||||||| |||||||||||||||| ||| |||||| |||    
T  20493482 actcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtaggacatacattgatttcatccaataaatgag 20493581  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||    |   ||||||||||||||||||||||||||||| ||||    
T  20493582 tgagtgttagagagagtgttgaaaagtgagtgttgctagcattc 20493625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 37776740 - 37776883
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||||||||||||||    
T  37776740 actcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatctaataaaagag 37776839  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | ||  ||| ||||||||||||||||||||||||| ||||    
T  37776840 tg--agtgctggagaaagtgttgaaaagtgagtgttgctagcattc 37776883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 46450209 - 46450067
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttac-aaagtggttggacatacattgattttatctaataaaaga 622  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |  || |||||||| |||||||||||||||  |||||||||||||    
T  46450209 actcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgattccatctaataaaaga 46450110  T
Q  623 gtgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |||  | | |||||||||||| |||||||||||||||||| ||||    
T  46450109 gtg--agtgctagagagtgttcaaaagtgagtgttgctagcattc 46450067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 46161090 - 46160949
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    |||||||||| ||||||  |||||||| ||| ||||||||||    
T  46161090 actcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttcatccaataaaagag 46160991  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | |||||||||||| |||||||||||||||||| ||||    
T  46160990 tg--agtgctagagagtgttcaaaagtgagtgttgctagcattc 46160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 524 - 623
Target Start/End: Original strand, 29588770 - 29588869
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  | ||||||   |||||||||||||||||||| ||||||||||    
T  29588770 actcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacatacattgattttatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 18427187 - 18427288
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||| |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  18427187 actcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatacattgatttcatccaataaatgag 18427286  T
Q  624 tg 625  Q
    ||    
T  18427287 tg 18427288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 504 - 667
Target Start/End: Complemental strand, 48351599 - 48351436
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||||||||| ||| ||||  |||||||||| ||||||||||| ||||| ||||||||||||||||||| |  ||||||| ||  |||||| |||    
T  48351599 ttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacatatatt 48351500  T
Q  604 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||||||||| |||||||||||||   |   |||||||||| |||| ||||||||| ||| ||||    
T  48351499 gattttatccaataaaagagtgtgtcttaaagagagtgttaaaaactgagtgttgttagcattc 48351436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 625
Target Start/End: Complemental strand, 38414803 - 38414689
Alignment:
Q  511 cattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 610  Q
    |||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||| ||| |  ||||| |||| |||||||||||||| |||    
T  38414803 cattctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatacattgatctta 38414704  T
Q  611 tctaataaaagagtg 625  Q
    |||||| | ||||||    
T  38414703 tctaatgagagagtg 38414689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 20791439 - 20791338
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||    
T  20791439 actcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatag 20791340  T
Q  624 tg 625  Q
    ||    
T  20791339 tg 20791338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 504 - 607
Target Start/End: Original strand, 2419481 - 2419584
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||| |||| |||||| | ||||||||| |||||| ||||    
T  2419481 ttttgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtggtaggacatgcatt 2419580  T
Q  604 gatt 607  Q
    ||||    
T  2419581 gatt 2419584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 516 - 658
Target Start/End: Original strand, 8825008 - 8825150
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| |||||||||||||||||||||||| ||||||  | || |||||||||||||||| |  | ||| |||| ||||||| |||||||| ||||||    
T  8825008 tctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgggacatatattgatttcatctaa 8825107  T
Q  616 taaaagagtgtaaatactagagag--tgttgaaaagtgagtgttg 658  Q
    |||||| |||  | ||||||||||   ||||||||||||||||||    
T  8825108 taaaagggtg--agtactagagagatggttgaaaagtgagtgttg 8825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 5452099 - 5452240
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||| ||||||||||| |||||||| ||| |  ||||||||| ||||||||||  |  |||||||||| ||| |||||||||||| ||| ||||||||||    
T  5452099 actcgctctcttattgatttaaatccttggg--tctacacttagaaaattgaatccacacaaagtggtgggaaatacattgatttcatccaataaaagag 5452196  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    || |  |   ||||||||||||||||||||||||||||| ||||    
T  5452197 tgaatgttaaagagagtgttgaaaagtgagtgttgctagcattc 5452240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 525 - 625
Target Start/End: Complemental strand, 22604702 - 22604602
Alignment:
Q  525 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 624  Q
    |||||||||||||  |||||||||||||||  |||||| ||||||||||||||||  ||||| |||| ||||||||||| |||||||| |||||| ||||    
T  22604702 ctcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaataaatgagt 22604603  T
Q  625 g 625  Q
    |    
T  22604602 g 22604602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 524 - 661
Target Start/End: Original strand, 55452052 - 55452187
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| | |||||||||||||||| ||  ||||||||||| |||| |||| |  |||||||||| ||||||||||  |||  ||| ||||||||||    
T  55452052 actcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatgtattccatccaataaaagag 55452151  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgcta 661  Q
    ||  | ||| |||||||||| |||||||||||||||||    
T  55452152 tg--agtaccagagagtgttcaaaagtgagtgttgcta 55452187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 619
Target Start/End: Original strand, 19345047 - 19345132
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    |||||||||||||||||||||  |||||| |||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||    
T  19345047 ttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataaa 19345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 660
Target Start/End: Original strand, 50156697 - 50156831
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |   |||||| || | ||||||||| |||| ||  ||||||  |     
T  50156697 actcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttgtggaacatacattaatttcattcaataaataa- 50156795  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgct 660  Q
     |||| ||  |||| ||||||||||||||||||||||    
T  50156796 -gtaagtatcagagtgtgttgaaaagtgagtgttgct 50156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 531 - 667
Target Start/End: Complemental strand, 29755636 - 29755500
Alignment:
Q  531 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaat 630  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||| ||   ||||| ||||||| |||   |||||||||||    |    
T  29755636 ctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattctattcgataaaagagtgggtgt 29755537  T
Q  631 actagagagtgttgaaaagtgagtgttgctagtattc 667  Q
       ||||| ||||||||||||||||||||||| ||||    
T  29755536 taaagagaatgttgaaaagtgagtgttgctagcattc 29755500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 608
Target Start/End: Original strand, 52123993 - 52124077
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |  ||||| | || ||||||||||| ||||    
T  52123993 actcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatagtgggacatacattaattt 52124077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 14236162 - 14236061
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| | |||||||| ||||| ||||||||||||||||||| |||| ||||||  | |||||||| ||||||| |||||||| ||| ||||||| ||    
T  14236162 actcacttttttattggtctaaattattgtggatctacactttggaaatagaactcgcataaagtggtgggacatatattgatttcatccaataaaatag 14236063  T
Q  624 tg 625  Q
    ||    
T  14236062 tg 14236061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 50056966 - 50056893
Alignment:
Q  233 gctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    |||||||| ||| ||||||||| || ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  50056966 gctctgataccatgtgaaaactgaatattatatttcagagataaataatgtacaaccactaatgtgtttatata 50056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 624
Target Start/End: Original strand, 26310495 - 26310583
Alignment:
Q  536 attggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 624  Q
    |||||||||||||||| ||| |||||||||||||||||||||    | ||| |||| |||||||||||||||| ||| |||||||||||    
T  26310495 attggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagt 26310583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 603
Target Start/End: Original strand, 10948589 - 10948676
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    ||||||| ||||||||| |||||||||||||||||||||| | |||||||| ||||||||||    |||||||||| | |||||||||    
T  10948589 tctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacatt 10948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 662
Target Start/End: Complemental strand, 27243189 - 27243050
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||| |||| |||| |  | |||||||| |||||| ||||||||||||| |||||||||    
T  27243189 actcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtggtgggacatgcattgattttatccaataaaaga 27243090  T
Q  623 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 662  Q
    |||    |   |||||||||| ||||| ||||||||||||    
T  27243089 gtgagtgttagagagagtgttcaaaagagagtgttgctag 27243050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 524 - 586
Target Start/End: Original strand, 24429062 - 24429124
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaa 586  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  24429062 actcactattttattggtttaaatcattgtggatctacactttaaaaattgaaccctcacaaa 24429124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 28095952 - 28096039
Alignment:
Q  218 cccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaa-aatgcacaactactaatgtgtttatata 306  Q
    ||||||||||| |||||||  |||||| |||||||| ||| |||||||||||||||||||| |||  ||||| |||||||||||||||||    
T  28095952 cccccaagatcgggagctc--atgccatgtgaaaacaaaatattatatttcagagataaaataatttacaaccactaatgtgtttatata 28096039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 669
Target Start/End: Complemental strand, 30624739 - 30624631
Alignment:
Q  559 tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttg 658  Q
    |||| ||||||||||||||||  ||||||||||   ||||||||| |||||||  ||||||||||||  | |  ||||||||| | ||||||||||||||    
T  30624739 tacattttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtg--agtgttagagagtgctcaaaagtgagtgttg 30624642  T
Q  659 ctagtattcat 669  Q
    |||| ||||||    
T  30624641 ctagcattcat 30624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 569
Target Start/End: Original strand, 38138613 - 38138664
Alignment:
Q  518 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaa 569  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  38138613 tttaatacttactctcttattggtttaaatcattgtggatctatactttgaa 38138664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 662
Target Start/End: Complemental strand, 41387704 - 41387568
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||| ||||||||| | |||||||||||||| ||| ||||||||||||| ||| |  ||||| | ||  || |||||| ||||| ||| |||||| |||    
T  41387704 actcaatctcttatttgattaaatcattgtgggtctgcactttgaaaattaaacccacacaaaatagtgtgatatacatcgatttaatccaataaatgag 41387605  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctag 662  Q
    ||  | | ||||||||||||||| | |||||||||||||    
T  41387604 tg--agtgctagagagtgttgaataatgagtgttgctag 41387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 608
Target Start/End: Complemental strand, 49072138 - 49072064
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||| |||||||||||  |||||| ||| ||||    
T  49072138 ttattggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacataaattaattt 49072064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 654
Target Start/End: Complemental strand, 138914 - 138778
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| ||| ||||| |||||| |||||||||||||   | |||| ||| |||||||||  | |||||| ||||  ||||||||||||||| ||  ||    
T  138914 tctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgatttcattcaa 138815  T
Q  616 taaaagagtgtaaatactagagagtgttgaaaagtgagt 654  Q
    ||||||||||  | | ||||||||| ||||||| |||||    
T  138814 taaaagagtg--agtgctagagagtcttgaaaactgagt 138778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 625
Target Start/End: Original strand, 7419241 - 7419316
Alignment:
Q  550 ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||| |||| ||||||  ||||| | |  ||||||| ||| |||||||||||||||||||||    
T  7419241 ttgtggatctacactttggaaatagaactcacacaaaatagagggacatatatttattttatctaataaaagagtg 7419316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 619
Target Start/End: Original strand, 15790407 - 15790501
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||  |    | ||| ||||  ||||||||||||||||||| ||||||    
T  15790407 actcactctcttattggtttaaatcattatgg-cctacactttgaaaattgtcccaccataaaatggtgagacatacattgattttatccaataaa 15790501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 22856282 - 22856325
Alignment:
Q  535 tattggtttaaatcattgtggatctacactttgaaaattgaact 578  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  22856282 tattggtttaaataattgtggatctacactttgaaaattaaact 22856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 622
Target Start/End: Complemental strand, 44844125 - 44844026
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||| | ||||||| |||||||||||||| || |||||||| ||||||||||||  |  || |||| ||||||||||| |||||||  |||||||||    
T  44844125 actcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacatacatttattttattcaataaaaga 44844026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 534 - 624
Target Start/End: Original strand, 50661568 - 50661659
Alignment:
Q  534 ttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 624  Q
    ||||||| |||||||| ||||| || |||| |||| |||| |||| |  | |||||||| |||||| |||||||||||||||||||||||||    
T  50661568 ttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacatgcattgattttatctaataaaagagt 50661659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 598
Target Start/End: Complemental strand, 752535 - 752461
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacat 598  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||  |||| |||| |  |||||||||| ||||||    
T  752535 actcattctcttattagtttaaatcattgtgggtctacactttagaaatagaacccacacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 577
Target Start/End: Original strand, 29388634 - 29388684
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  29388634 cactctcttattgacttaaatcattgtgagtctacactttgaaaattgaac 29388684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 39186102 - 39186028
Alignment:
Q  529 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||    
T  39186102 ctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacatt 39186028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 578
Target Start/End: Complemental strand, 43016556 - 43016502
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 578  Q
    |||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||    
T  43016556 actcactctcttattgatttaaatcattatgaatctatactttaaaaattgaact 43016502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 50057325 - 50057279
Alignment:
Q  194 ctagggtttatgcggaaacaagaccccccaagatcaggagctctgat 240  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  50057325 ctagggtttatgcggaagcaacaccccccaagatcgggagctctgat 50057279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 662
Target Start/End: Complemental strand, 13809219 - 13809087
Alignment:
Q  530 tctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaa 628  Q
    ||||||||||| ||||| || ||||| || || |||||| |||| |||| |  | ||| |||| |||||||||||||||||||| |||||||||||| ||    
T  13809219 tctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtg-aa 13809121  T
Q  629 atactagagagtgttgaaaagtgagtgttgctag 662  Q
     |   |||||||||  ||||| ||||||||||||    
T  13809120 gttagagagagtgtgtaaaagagagtgttgctag 13809087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 656
Target Start/End: Original strand, 40702173 - 40702289
Alignment:
Q  538 tggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagag 637  Q
    |||||||||| | |||||||| | ||||| |||||||||| |  | |||||| | |  |||||||| |||| |||  ||||||||||  || | ||||||    
T  40702173 tggtttaaattactgtggatcaaaactttaaaaattgaacccacataaagtgatggatcatacattaatttcatcatataaaagagt--aagtgctagag 40702270  T
Q  638 agtgttgaaaagtgagtgt 656  Q
    |||||||||||||||||||    
T  40702271 agtgttgaaaagtgagtgt 40702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 625
Target Start/End: Original strand, 41707490 - 41707577
Alignment:
Q  538 tggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||| ||||||| |||| ||||| |||||||||| |  |||||||| |   |||||||||||||||||| ||| | ||||||    
T  41707490 tggtttaaattattgtgggtctatactttaaaaattgaacccacacaaagtgatgaaacatacattgattttatccaatgagagagtg 41707577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 625
Target Start/End: Original strand, 43657067 - 43657134
Alignment:
Q  558 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  43657067 ctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtg 43657134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 50057488 - 50057409
Alignment:
Q  161 cgaaaaaagcaaaagtaattgcaaggactgcaactagggtttatgcggaaacaagaccccccaagatcaggagctctgat 240  Q
    ||||||||| ||||||||  |||| ||| ||  |||||||||||| |||| |||  |||||||||||| |||||||||||    
T  50057488 cgaaaaaagaaaaagtaaccgcaaagacggcggctagggtttatgtggaagcaacgccccccaagatcgggagctctgat 50057409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 50061429 - 50061382
Alignment:
Q  259 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||||||||||||| |||| | ||| |||||||||||||||||    
T  50061429 attatatttcagagataaataatgtagaacgactaatgtgtttatata 50061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 566
Target Start/End: Complemental strand, 742099 - 742057
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacacttt 566  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  742099 actcattctcttattagtttaaatcattgtgggtctacacttt 742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 661
Target Start/End: Original strand, 40715879 - 40716036
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||||||||| || ||||| | ||| |||| |||| ||||||||||||||   || ||| ||| |||||||||| |  |||||||| |  | ||||||||    
T  40715879 ttttaaacatattttttaatattcaatctcctattagtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacatt 40715978  T
Q  604 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgcta 661  Q
     |||| | |  |||||||||||  | | ||  ||||||||||||||||||||||||||||    
T  40715979 aatttcaccatataaaagagtg--agtgctagagagagtgttgaaaagtgagtgttgcta 40716036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 579
Target Start/End: Complemental strand, 41607544 - 41607499
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactc 579  Q
    |||||| ||||||| | ||||||||||||||||||||||| |||||    
T  41607544 ttattgatttaaataactgtggatctacactttgaaaattaaactc 41607499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 625
Target Start/End: Complemental strand, 42340958 - 42340873
Alignment:
Q  540 gtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||| ||| ||||||||||||| | |   |||||||||||  ||||| |||| || |  |||||||||||||||    
T  42340958 gtttaaatcattgtgggtctgcactttgaaaattaagccaatacaaagtggtgagacatgcatttatatcttctaataaaagagtg 42340873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 584 - 625
Target Start/End: Original strand, 46237143 - 46237184
Alignment:
Q  584 aaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||| |||||||||||||||| ||| ||||||||||||    
T  46237143 aaagtggtgggacatacattgatttcatccaataaaagagtg 46237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 524 - 662
Target Start/End: Complemental strand, 34905479 - 34905341
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  34905479 actcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagag 34905380  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctag 662  Q
    ||    |   ||||||||||||||| |||||||||||||    
T  34905379 tgagtgttagagagagtgttgaaaaatgagtgttgctag 34905341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 527 - 619
Target Start/End: Original strand, 16852013 - 16852105
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||| |||| ||||||||||    
T  16852013 cactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtggtgggacatacatttatttcatctaataaa 16852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 517 - 657
Target Start/End: Original strand, 10133188 - 10133328
Alignment:
Q  517 ctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaat 616  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |  | |||||||| ||||||||| | |||| ||| |||    
T  10133188 ctttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaat 10133287  T
Q  617 aaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 657  Q
    ||| |||||    |   ||||||||||||||||||||||||    
T  10133288 aaatgagtgagtgttagagagagtgttgaaaagtgagtgtt 10133328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 445961 - 445818
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||| |||||||||||||||||||||||||  |||| |||||||||||||||| |  ||||||||||  ||||||||||||||| ||| ||||||| ||    
T  445961 actcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgatttcatccaataaaaaag 445862  T
Q  624 tgtaaatactagag--agtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | ||||||  ||||||||||| ||||| ||||||| ||||    
T  445861 tg--agtgctagagatagtgttgaaaaatgagtattgctagcattc 445818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 625
Target Start/End: Complemental strand, 5106439 - 5106340
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||| ||||||||||||||| |||||| | ||||||||||||||||| | |  |||||||||| |||||||||||||||||||| ||||||| ||||    
T  5106439 tcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgggacatacattgattttatccaataaaaaagtg 5106340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 524 - 659
Target Start/End: Original strand, 31116161 - 31116296
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||| |||| |  ||||||| || |||||||||||||||| ||| |||| |||||    
T  31116161 actcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacatacattgatttcatccaatagaagag 31116260  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgc 659  Q
    || |  |   |||||||||| |||||||||||||||    
T  31116261 tgaatgttagagagagtgttcaaaagtgagtgttgc 31116296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 21987435 - 21987334
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| ||| |||||||||||| ||| ||||||| ||    
T  21987435 actcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggatatacattgatttcatccaataaaatag 21987336  T
Q  624 tg 625  Q
    ||    
T  21987335 tg 21987334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 524 - 657
Target Start/End: Complemental strand, 1392770 - 1392640
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| |||||||||| | |||||||| ||  ||||||||||||||| ||| ||||||| |     
T  1392770 actcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaaaat 1392672  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgtt 657  Q
     |  | | |||||||||||| |||||||||||||    
T  1392671 ag--agtgctagagagtgttaaaaagtgagtgtt 1392640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 619
Target Start/End: Complemental strand, 32122928 - 32122843
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||  ||||| |||| ||||||| |||||||| ||| ||||||    
T  32122928 ttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacatatattgatttcatccaataaa 32122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 625
Target Start/End: Original strand, 32598965 - 32599086
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    ||||||||||| ||||||| ||||||||| |||||| |||||||||||||| |||||||||||| |||| | || |  |||||||||  ||||||||||     
T  32598965 ttttaaacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtggcgggacatacatg 32599064  T
Q  604 gattttatctaataaaagagtg 625  Q
     |||  ||| ||||||||||||    
T  32599065 tattccatccaataaaagagtg 32599086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 620
Target Start/End: Original strand, 32112734 - 32112850
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||||| ||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||||  ||| |  ||||| ||||  ||||| ||||    
T  32112734 ttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtgacatgcatt 32112833  T
Q  604 gattttatctaataaaa 620  Q
    ||||| ||| |||||||    
T  32112834 gatttcatccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 533 - 620
Target Start/End: Original strand, 12780805 - 12780892
Alignment:
Q  533 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    |||||||||||||||||||||||||||||||||||||||||||||    ||||||| ||  ||||||||||||||  | |||||||||    
T  12780805 cttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatacattgattccacctaataaaa 12780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 530 - 607
Target Start/End: Original strand, 12784982 - 12785059
Alignment:
Q  530 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatt 607  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||   | ||||| ||  ||||||||||||||    
T  12784982 tctcttattggtttaaatcattatggatctacactttgaaaattgaactaacataaagtagtaagacatacattgatt 12785059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 2676038 - 2675937
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| | ||||||||||||| |||||||| |||||| |||||||||| |||    |||||||||| ||||||||||||| || ||  ||||||||||    
T  2676038 actcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacatacattgaattcattcaataaaagag 2675939  T
Q  624 tg 625  Q
    ||    
T  2675938 tg 2675937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 578
Target Start/End: Original strand, 16187469 - 16187523
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 578  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  16187469 actcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaact 16187523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 578
Target Start/End: Original strand, 16187687 - 16187741
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 578  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  16187687 actcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaact 16187741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 662
Target Start/End: Original strand, 35128769 - 35128898
Alignment:
Q  534 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatac 632  Q
    ||||||| | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| |||||||||||||||||| | ||||||||||||  | | |    
T  35128769 ttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtg--actgc 35128866  T
Q  633 t--agagagtgttgaaaagtgagtgttgctag 662  Q
    |  |||||||||| ||||| ||||||||||||    
T  35128867 tagagagagtgttcaaaagagagtgttgctag 35128898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 19090251 - 19090353
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||||| || ||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | |||||||||    
T  19090251 actcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaga 19090350  T
Q  623 gtg 625  Q
    |||    
T  19090351 gtg 19090353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 17144700 - 17144757
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaatt 573  Q
    ||||||| ||| ||||  ||||| |||||||||||||||| |||||||||||||||||    
T  17144700 tctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaatt 17144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 557
Target Start/End: Original strand, 34882267 - 34882300
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggat 557  Q
    ||||||||||||||||||||||||||||||||||    
T  34882267 actcactctcttattggtttaaatcattgtggat 34882300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 12753797 - 12753940
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||| |||| ||||| |||||||||||||||  | |||||  ||||||| |||| |  |||||||||| |||||| |||  |||||||| ||| ||||||    
T  12753797 actcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgggacatgcatgtattttatccaatgaaagag 12753896  T
Q  624 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    || |   || || |||||||| |||||||||||||||||| ||||    
T  12753897 tgattgcta-taaagagtgttcaaaagtgagtgttgctagcattc 12753940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 579
Target Start/End: Original strand, 8441886 - 8441941
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 579  Q
    ||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||    
T  8441886 actcactcttttattggtttagattattgaaggtctacactttgaaaattgaactc 8441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 579
Target Start/End: Original strand, 8450690 - 8450745
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 579  Q
    ||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||    
T  8450690 actcactcttttattggtttagattattgaaggtctacactttgaaaattgaactc 8450745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 667
Target Start/End: Complemental strand, 12753791 - 12753758
Alignment:
Q  634 agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |||||||||||||||| |||||||||||||||||    
T  12753791 agagagtgttgaaaagagagtgttgctagtattc 12753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 504 - 624
Target Start/End: Complemental strand, 39471320 - 39471200
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    |||||||||| |||||||||||    
T  39471320 ttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgggacatacatt 39471221  T
Q  604 gattttatctaataaaagagt 624  Q
    ||||| |||||||||||||||    
T  39471220 gatttcatctaataaaagagt 39471200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 516 - 661
Target Start/End: Complemental strand, 43771277 - 43771132
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| |||||||||||||||| ||| ||    
T  43771277 tctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtggtgggacatacattgatttcatccaa 43771178  T
Q  616 taaaagagtg-taaatactagagagtgttgaaaagtgagtgttgcta 661  Q
    ||||||||||    |||  |||||||||| |||||||||||||||||    
T  43771177 taaaagagtgagtcata-gagagagtgttcaaaagtgagtgttgcta 43771132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 20454681 - 20454543
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    ||||||||  ||||||||||||||||||||||||||||||||    
T  20454681 actcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtg--tggacatacattgattttatctaataaaagag 20454584  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgctagta 664  Q
    ||  | | ||  ||||||||||||||||| |||||||||||||    
T  20454583 tg--agtgctagagagagtgttgaaaagtaagtgttgctagta 20454543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 526 - 658
Target Start/End: Original strand, 10169684 - 10169814
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||||||||  |||||||||| ||||||| |||||||| ||| ||||| ||||||    
T  10169684 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtaggacatatattgatttcatccaataatagagtg 10169783  T
Q  626 taaatactagagagtgttgaaaagtgagtgttg 658  Q
      |||| |||||||||||||||||||| |||||    
T  10169784 --aatattagagagtgttgaaaagtgaatgttg 10169814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 524 - 662
Target Start/End: Complemental strand, 8109099 - 8108961
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    ||||| | || |||||||||||||||| | | ||||||||||    
T  8109099 actcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattagtgggacatacattgatttcacccaataaaagag 8109000  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgctag 662  Q
    ||  | | ||  |||||||||||||||||||||||||||||    
T  8108999 tg--agtgctagagagagtgttgaaaagtgagtgttgctag 8108961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 525 - 667
Target Start/End: Complemental strand, 50164537 - 50164395
Alignment:
Q  525 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 624  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |  ||||| |||| ||| |||||||||||||||| |||||| ||||    
T  50164537 ctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtgggagatacattgattttatccaataaatgagt 50164438  T
Q  625 gtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |  | | ||  |||||||||| ||||||||||||| |||||||||    
T  50164437 g--agtgctagagagagtgttaaaaagtgagtgttactagtattc 50164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 722300 - 722199
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| |||||||| ||||||| ||| ||||||| ||    
T  722300 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaag 722201  T
Q  624 tg 625  Q
    ||    
T  722200 tg 722199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 47009332 - 47009231
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||  |||| ||||| |||||||| ||||||||||    
T  47009332 actcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattttatccaataaaagag 47009233  T
Q  624 tg 625  Q
    ||    
T  47009232 tg 47009231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 33653526 - 33653669
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| ||||||||||||||||||||||||||| | | |||||||||||||  |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  33653526 actcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacatacattgatttcatcaaataaatgag 33653625  T
Q  624 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    || | ||||  ||||||||||||||| ||||||||||||| ||||    
T  33653626 tgattaata-gagagagtgttgaaaactgagtgttgctagcattc 33653669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 531 - 667
Target Start/End: Complemental strand, 49077385 - 49077249
Alignment:
Q  531 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaat 630  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||| ||||||| ||| |||||||||||||||||| ||  | |    
T  49077385 ctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaagaatg--agt 49077288  T
Q  631 act--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
     ||  ||||| ||||||||| ||||||||||||| ||||    
T  49077287 gctaaagagaatgttgaaaactgagtgttgctagcattc 49077249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 754617 - 754718
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| |||||||| |||| || ||| ||||||| ||    
T  754617 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgagttcatccaataaaaaag 754716  T
Q  624 tg 625  Q
    ||    
T  754717 tg 754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 667
Target Start/End: Original strand, 20225383 - 20225519
Alignment:
Q  529 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaa 628  Q
    ||||||||||||||||||||||||||  ||||||||||| |||| |||| |  | |||||||| |||||| ||| ||||  ||| ||||||||||||  |    
T  20225383 ctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtg--a 20225480  T
Q  629 atactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
     | |||||||||||| |||||||||||||||||| ||||    
T  20225481 gtgctagagagtgttcaaaagtgagtgttgctagcattc 20225519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 526 - 620
Target Start/End: Complemental strand, 24834719 - 24834625
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |  ||||| |||| |||||||||||||||  ||| |||||||    
T  24834719 tcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatggtgggacatacattgattccatccaataaaa 24834625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 26361345 - 26361480
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |  ||||| |||| || |||||||||| || ||| ||||||||||    
T  26361345 actcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatggtgggtcatacattgacttcatccaataaaagag 26361444  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |||         ||||||||||||||||||||||||||| ||||    
T  26361445 tgt--------tagagtgttgaaaagtgagtgttgctagcattc 26361480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 625
Target Start/End: Original strand, 24938432 - 24938553
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||| ||||| ||| ||| |||||||||||||||||||||||||| | |||||||||| |||||||||  |  ||||| |||| |||||||||||    
T  24938432 ttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacatacatt 24938531  T
Q  604 gattttatctaataaaagagtg 625  Q
    ||||  ||| ||||||||||||    
T  24938532 gattacatccaataaaagagtg 24938553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 625
Target Start/End: Original strand, 50481584 - 50481683
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||| |||  | |||||||||||  ||||||| ||||||| ||| ||||||||||||    
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtg 50481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 49242313 - 49242212
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |  |||||||| | ||||||| |||||||| ||| ||| ||| ||    
T  49242313 actcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgggacatatattgatttcatccaattaaaaag 49242214  T
Q  624 tg 625  Q
    ||    
T  49242213 tg 49242212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 624
Target Start/End: Complemental strand, 22542530 - 22542424
Alignment:
Q  518 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 617  Q
    ||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||||| |  |||||||||| | |||||| ||||||| ||  ||||    
T  22542530 tttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtggaacatactttgatttcattcaata 22542431  T
Q  618 aaagagt 624  Q
    |||||||    
T  22542430 aaagagt 22542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 657
Target Start/End: Original strand, 19937189 - 19937341
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    ||||||||| | |||||||  |||||||| || ||||||| ||||||||| |||||| ||||||||||| ||||||  | | | |||| |||||||||||    
T  19937189 ttttaaacactctctttaattctcactcttttgttggtttgaatcattgtcgatctatactttgaaaatagaactcacatataatggtgggacatacatt 19937288  T
Q  604 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 657  Q
    |||| |||| ||| ||| | | ||||| ||||||||  || |||||||||||||    
T  19937289 gattgtatccaattaaaaaat-taaatgctagagagaatttaaaagtgagtgtt 19937341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 34129437 - 34129538
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| ||||||||||||| |||||||  || |||||||||||||||||| |  |||||||||| ||| |||||||||| | ||| |||| |||||    
T  34129437 actcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaatagaagag 34129536  T
Q  624 tg 625  Q
    ||    
T  34129537 tg 34129538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 625
Target Start/End: Complemental strand, 52671993 - 52671872
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    ||||||||| | ||||||| ||||||| ||||||| ||||||||||||| | || |||||||| |||||||||||   | ||| |||| |||||||||||    
T  52671993 ttttaaacactctctttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacatacatt 52671894  T
Q  604 gattttatctaataaaagagtg 625  Q
     |||| ||| ||||||| ||||    
T  52671893 tatttcatccaataaaaaagtg 52671872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 504 - 625
Target Start/End: Original strand, 37451030 - 37451149
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||||||||  |||| ||| ||||||||| ||||||||||||||||||| |  |||||||||||||||| ||||||  ||||| ||||  ||  |||||     
T  37451030 ttttaaacaccttctctaatactcactcttttattggtttaaatcattgcgagtctacactttgaaaatagaactc--acaaattggtaagatgtacatg 37451127  T
Q  604 gattttatctaataaaagagtg 625  Q
    |||| |||| ||||||||||||    
T  37451128 gattctatccaataaaagagtg 37451149  T

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Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 527 - 625
Target Start/End: Original strand, 48339380 - 48339478
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||| ||||||||||||| |||| ||| ||||| ||||||||||||||| |  |||||||||| | ||||||||||||||  || ||||| ||||||    
T  48339380 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtg 48339478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 625
Target Start/End: Complemental strand, 38636472 - 38636379
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||| | |||||||||||||||||||||||| ||||||  || |  | ||||| ||  ||||||||||||||||||| ||||||||||||    
T  38636472 tcttattgatataaatcattgtggatctacactttaaaaattagacccacataaagtagtgagacatacattgattttatcaaataaaagagtg 38636379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 619
Target Start/End: Original strand, 31250924 - 31251015
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    ||||| |||||| ||||||||||||||| |||||| ||||||||||||||    | ||| |||| |||||||||||||||| ||| ||||||    
T  31250924 actcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataaa 31251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 620
Target Start/End: Original strand, 38537560 - 38537649
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttg---aaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    |||||| ||||||||||| || ||||||||||||   |||||||||||| |||||||| ||  ||||||||||||||| ||| |||||||    
T  38537560 ttattgatttaaatcattatgaatctacactttgttgaaaattgaactcatacaaagtagtaagacatacattgatttcatcaaataaaa 38537649  T

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Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 617
Target Start/End: Original strand, 45310989 - 45311078
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 617  Q
    |||||||||||| |||||||||||||   ||| ||||||||||||||||  |  |||||||||| ||||||| |||||||| ||| ||||    
T  45310989 actctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatccccacaaagtggtgggacatatattgatttcatccaata 45311078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 11393209 - 11393149
Alignment:
Q  246 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  11393209 gtgaaaacttaatattatatttcagagataaataatgtacaaccactgatgtgtttatata 11393149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 11402936 - 11402876
Alignment:
Q  246 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  11402936 gtgaaaacttaatattatatttcagagataaataatgtacaaccactgatgtgtttatata 11402876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 40991626 - 40991769
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| |||||||||||||||||||||| |||||||||   |||| |  |   ||||| | ||| ||||||| |||||||| ||| ||| ||||||    
T  40991626 actcactcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatggggtgggacatatattgatttcatccaatgaaagag 40991725  T
Q  624 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  40991726 tgagtgata-gagagagtgttgaaaagtgagtgttgctagcattc 40991769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 658
Target Start/End: Original strand, 46242000 - 46242113
Alignment:
Q  543 taaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgt 642  Q
    ||||||||||||| |||| | ||||||||||||||    ||||| |||| ||||||||| |||||| |||  |||||  ||||| | | |||||||||||    
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaa--agtgtgagttctagagagtgt 46242097  T
Q  643 tgaaaagtgagtgttg 658  Q
    | ||||||||||||||    
T  46242098 taaaaagtgagtgttg 46242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 534 - 625
Target Start/End: Original strand, 5044587 - 5044678
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||||||||| |||||| |||||| ||| ||||||||||||  ||||| | ||  |||||| |||||||| ||| ||||||| ||||    
T  5044587 ttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaaatagtgtgacatatattgatttcatccaataaaaaagtg 5044678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 534 - 625
Target Start/End: Original strand, 49682838 - 49682929
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||  | ||||||||  || |||||||||||| |||  |||||| ||||    
T  49682838 ttattggtttaaatcgatgtggctctacactttgaaaattgaattcaaataaagtggtgagatatacattgatttcatccgataaaaaagtg 49682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 661
Target Start/End: Complemental strand, 50571985 - 50571870
Alignment:
Q  546 atcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgtt 643  Q
    ||||||| || ||||||||||||||||||||  |  | ||| || | || ||||||||||||| |||||||||||||  |||| | ||  ||||||||||    
T  50571985 atcattgcgggtctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaaga--gtaagtgctagagagagtgtt 50571888  T
Q  644 gaaaagtgagtgttgcta 661  Q
    ||||||||| ||||||||    
T  50571887 gaaaagtgactgttgcta 50571870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 570
Target Start/End: Complemental strand, 11895180 - 11895134
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaa 570  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  11895180 actcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 625
Target Start/End: Complemental strand, 13070104 - 13069983
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacat 602  Q
    |||| |||||||||| ||| ||||||||| ||||||  | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| | ||||||||    
T  13070104 ttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtggaacatacat 13070005  T
Q  603 tgattttatctaataaaagagtg 625  Q
    |||||| | | ||||||||||||    
T  13070004 tgatttca-ccaataaaagagtg 13069983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 625
Target Start/End: Original strand, 25719129 - 25719251
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggat-ctacactttgaaaattgaactcttacaaagtggttggacatacat 602  Q
    |||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||| | ||||| |||| ||||  ||| |  | |||||||| ||||||||||    
T  25719129 ttttgaacaatttctctaatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacatacat 25719228  T
Q  603 tgattttatctaataaaagagtg 625  Q
    |||||| | | ||||| ||||||    
T  25719229 tgatttcaaccaataagagagtg 25719251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 51206187 - 51206085
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||| | |||||| ||| ||| ||||| |||||||||  |||||  | |||||| | |||||||||||||||| |||||||||| ||    
T  51206187 actcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagtgatgggacatacattgatttcatctaataaatga 51206088  T
Q  623 gtg 625  Q
    |||    
T  51206087 gtg 51206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 609
Target Start/End: Complemental strand, 13520084 - 13520007
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttt 609  Q
    |||||||||||||||||||||||| | ||||| ||| |||  |||| |  |||||||||| | |||||||||||||||    
T  13520084 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgatttt 13520007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 626
Target Start/End: Original strand, 18421878 - 18421968
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 626  Q
    ||||||||||||||||||||  ||  | ||||| |||||| ||| |  ||| |||||| |||||||||||||||| ||||||||||| |||||    
T  18421878 ttattggtttaaatcattgtaaatacatactttaaaaattaaacac--acacagtggtgggacatacattgatttcatctaataaaaaagtgt 18421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 625
Target Start/End: Original strand, 21776942 - 21776983
Alignment:
Q  584 aaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  21776942 aaagtggtaggacatacattgattttatccaataaaagagtg 21776983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 658
Target Start/End: Original strand, 33995985 - 33996106
Alignment:
Q  537 ttggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactaga 636  Q
    |||||||||| |||||||  | || | |||||||||||||| |  | ||||||||  ||||||||||||||| || ||||||||||||| |  |   |||    
T  33995985 ttggtttaaaccattgtgagtttaaattttgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagaga 33996084  T
Q  637 gagtgttgaaaagtgagtgttg 658  Q
    | ||||||||||| ||||||||    
T  33996085 gtgtgttgaaaagagagtgttg 33996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 667
Target Start/End: Original strand, 47237812 - 47237921
Alignment:
Q  558 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtg 655  Q
    |||||||||||||||  ||||  || |||||||| ||||||| |||||||| ||| ||||||||||||  ||| ||  |||||||||| ||||| |||||    
T  47237812 ctacactttgaaaatgaaacttatataaagtggtgggacatatattgatttcatccaataaaagagtg--aatgctagagagagtgttcaaaagagagtg 47237909  T
Q  656 ttgctagtattc 667  Q
    ||| ||| ||||    
T  47237910 ttgatagcattc 47237921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 625
Target Start/End: Original strand, 30866999 - 30867070
Alignment:
Q  554 ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||||||||||||| |||| |  | |||||||| ||||||||||| |||| ||| ||||||| ||||    
T  30866999 ggatctacactttgaaaatggaacccacataaagtggtgggacatacattaatttaatccaataaaaaagtg 30867070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 50652375 - 50652470
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaag 621  Q
    ||||| |||||||| ||||||| |||||   |||||| ||||||||||||||    ||||||||||  || |||||||||||||||  ||||||||    
T  50652375 tcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtgagatatacattgattttatgcaataaaag 50652470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 608
Target Start/End: Original strand, 46536301 - 46536383
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    |||||||||||||| ||||||  | ||||| | |||||||||||||||||||    ||||||||||  |||||| ||||||||    
T  46536301 tcactctcttattgctttaaaatagtgtgggtttacactttgaaaattgaacatacacaaagtggtatgacatatattgattt 46536383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 52279298 - 52279348
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaa 576  Q
    |||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  52279298 tcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaa 52279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 576
Target Start/End: Complemental strand, 46287573 - 46287532
Alignment:
Q  535 tattggtttaaatcattgtggatctacactttgaaaattgaa 576  Q
    ||||||||||||||||||||  || |||||||||||||||||    
T  46287573 tattggtttaaatcattgtgagtcaacactttgaaaattgaa 46287532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 584 - 625
Target Start/End: Complemental strand, 48608163 - 48608122
Alignment:
Q  584 aaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||| ||||||||||| |||||||| ||||||||||||    
T  48608163 aaagtggtgggacatacattaattttatccaataaaagagtg 48608122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 9e-35; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 485 - 625
Target Start/End: Original strand, 32211786 - 32211922
Alignment:
Q  485 attagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttaca 584  Q
    |||||||||||||||||    || |||| |||||||||   |||||||||||||||||||||||||||||| ||||||| || ||||||||||||  |||    
T  32211786 attagcaacactctctt----ttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacaca 32211881  T
Q  585 aagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  32211882 aagtagttggacatacattgatttcatctaataaaagagtg 32211922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 41958226 - 41958085
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  41958226 actcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatccaataaatgag 41958127  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | || ||||||||||||||||||||||| |||| ||||    
T  41958126 tg--agtgcttgagagtgttgaaaagtgagtgttactagcattc 41958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 26980299 - 26980442
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||| ||||||||||||||||| || | ||||||||||||||||  ||||| |||| |||||||||||||||| ||| ||||| ||||    
T  26980299 actcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatggtgggacatacattgatttcatccaataatagag 26980398  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||   ||   ||||||||||||||||||||||||| ||| ||||    
T  26980399 tgagtattagagagagtgttgaaaagtgagtgttgttagcattc 26980442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 509 - 619
Target Start/End: Complemental strand, 33193208 - 33193098
Alignment:
Q  509 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    |||| ||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||| | ||||||||||||||    
T  33193208 aacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattgattt 33193109  T
Q  609 tatctaataaa 619  Q
     ||| ||||||    
T  33193108 catccaataaa 33193098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 30678948 - 30679049
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||||||| |  |||||||||| |||||||||||||||||||| | | ||||||    
T  30678948 actcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtggtgggacatacattgattttatccattgaaagag 30679047  T
Q  624 tg 625  Q
    ||    
T  30679048 tg 30679049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 41948183 - 41948284
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    |||||||||| | | |||||||||||||||| ||||||||||    
T  41948183 actcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatatacattgattttatccaataaaagag 41948282  T
Q  624 tg 625  Q
    ||    
T  41948283 tg 41948284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 19101638 - 19101739
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||    
T  19101638 actcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatag 19101737  T
Q  624 tg 625  Q
    ||    
T  19101738 tg 19101739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 2225367 - 2225226
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||| |||  |||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  2225367 actcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtgggacatacattgatttcatccaataaaagag 2225268  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||    | ||||||||||||||||| |||||||| |||| ||||    
T  2225267 tg--ggtgctagagagtgttgaaaattgagtgttactagcattc 2225226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 532 - 667
Target Start/End: Original strand, 6325858 - 6325990
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaata 631  Q
    |||| |||||||| |||||||||| | |||||||||||||  ||||||  ||||| |||| ||||||||||||||||||| ||||||| |||||  | ||    
T  6325858 tcttgttggtttacatcattgtgggtttacactttgaaaaa-gaactcacacaaaatggtgggacatacattgattttatttaataaatgagtg--atta 6325954  T
Q  632 ctagagagtgttgaaaagtgagtgttgctagtattc 667  Q
     ||||||||||| ||||||||| |||||||||||||    
T  6325955 ttagagagtgttcaaaagtgagcgttgctagtattc 6325990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 527 - 667
Target Start/End: Complemental strand, 11987766 - 11987626
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 626  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |  || ||||||| | ||||||||| |||| ||| |||||| || |      
T  11987766 cactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtggtggaacatacattaatttcatccaataaatgaataa 11987667  T
Q  627 aaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |  |   ||||||||||||||||||||||||| ||||||||    
T  11987666 atgttggagagagtgttgaaaagtgagtgttgttagtattc 11987626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 532 - 625
Target Start/End: Original strand, 1093118 - 1093211
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||| ||||||||||||||||| |||||||||| ||||  ||||| ||||||||||| | |||||||||||||| |||||||||| |||||    
T  1093118 tcttattagtttaaatcattgtggaactacactttggaaatataactcatacaaagtggtggaacatacattgatttcatctaataaacgagtg 1093211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 619
Target Start/End: Complemental strand, 39499535 - 39499442
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||  | |||||| |  ||||||||||||||||||||||||||    
T  39499535 tcactttcttattgaattaaatcattgtggatctacattttgaaaattgaactcacaaaaagtgatatgacatacattgattttatctaataaa 39499442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 486 - 667
Target Start/End: Original strand, 6133628 - 6133804
Alignment:
Q  486 ttagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaa 585  Q
    ||||||||||||||||    || |||||  ||| ||| |||||||||||||||||||||| ||||||||| | || |||||||||||||||| |  ||||    
T  6133628 ttagcaacactctctt----ttgaacatcctctctaatactcactctcttattggtttaa-tcattgtgggtgtagactttgaaaattgaacccacacaa 6133722  T
Q  586 agtggttggacatacattgattttatctaataaaagagtgtaaatactagagag--tgttgaaaagtgagtgttgctagtattc 667  Q
      |||| ||||||| |||||||| ||| |||||||| |||  | | ||||||||  ||||||||||||||||||||||| ||||    
T  6133723 tatggtgggacatatattgatttcatccaataaaagggtg--agtgctagagagattgttgaaaagtgagtgttgctagcattc 6133804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 524 - 616
Target Start/End: Complemental strand, 8899157 - 8899065
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaat 616  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |  |||||| ||| |||||||| || |||| |||||||    
T  8899157 actcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacacaaaggggtgggacatacctttatttcatctaat 8899065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 533 - 625
Target Start/End: Complemental strand, 22540502 - 22540410
Alignment:
Q  533 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  22540502 cttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 22540410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 527 - 608
Target Start/End: Original strand, 10659808 - 10659889
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    |||||||||| |||||| |||||||||    
T  10659808 cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatccattgattt 10659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 661
Target Start/End: Original strand, 28218085 - 28218222
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| |||||||  ||||||| | ||||| ||||||||||||||||||||  |  ||||||||||  ||||||||||||||| ||| ||||||||||    
T  28218085 actcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaaagag 28218184  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgcta 661  Q
    ||  ||| ||  |||||| |||||||| ||||||||||||    
T  28218185 tg--aatgctaaagagagggttgaaaaatgagtgttgcta 28218222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 523 - 667
Target Start/End: Original strand, 3872670 - 3872813
Alignment:
Q  523 aactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||| |||| |||||||||| ||||||||||| ||||||||||| |||||||||    ||||||||||  |||||| ||||| ||||| ||||| ||||    
T  3872670 aactctctcttttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattga-tttatttaatagaaga 3872768  T
Q  623 gtgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  3872769 gtg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 3872813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 533 - 625
Target Start/End: Complemental strand, 15523344 - 15523252
Alignment:
Q  533 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  15523344 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 15523252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 533 - 625
Target Start/End: Complemental strand, 15531338 - 15531246
Alignment:
Q  533 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  15531338 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 15531246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 572
Target Start/End: Original strand, 37552978 - 37553034
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaat 572  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37552978 tctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaat 37553034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 504 - 667
Target Start/End: Original strand, 8741240 - 8741405
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||| ||||| ||| ||||||||||||||| |||||||||||||||  | || |||||||||||||||| |  ||||| | ||  ||||||||||    
T  8741240 ttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattagtgagacatacatt 8741339  T
Q  604 gattttatctaataaaagagtgtaaatact----agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||||| ||| ||||||| ||||  |  |||    ||||||| ||||||||||||||||||||| ||||    
T  8741340 gatttcatccaataaaaaagtg--accactaaagagagagttttgaaaagtgagtgttgctagcattc 8741405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 536 - 625
Target Start/End: Complemental strand, 49730995 - 49730906
Alignment:
Q  536 attggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  ||||||| ||  |||||| |||  ||| ||||||||||||||||    
T  49730995 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtg 49730906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 656
Target Start/End: Complemental strand, 51732440 - 51732290
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| ||| |||||| ||| ||||||||| |||||||||||||| ||||||| | || |||||||||||| |||||  | ||||| || | | |||||||    
T  51732440 ttttgaacgttttctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaagtagtggaaaatacatt 51732341  T
Q  604 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgt 656  Q
     |||| ||| ||||||| ||||  |||  ||||||| ||||||||||||||||    
T  51732340 aatttcatcaaataaaaaagtg--aatgttagagagcgttgaaaagtgagtgt 51732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 622
Target Start/End: Complemental strand, 31866466 - 31866361
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||  | | ||| | || |||||||||||||||| ||| ||    
T  31866466 tctttaatactcactttcttattagtttaaatcattgtggat-tacactttaaaaattgaaccttcaaaaaatagtgggacatacattgatttcatccaa 31866368  T
Q  616 taaaaga 622  Q
     ||||||    
T  31866367 caaaaga 31866361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 524 - 618
Target Start/End: Complemental strand, 33114114 - 33114020
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 618  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    | ||| |||| ||||||||| |||||| | |||||||    
T  33114114 actcacttttttattggtttaaatcattctggatctacactttgaaaattgaacctacataaaatggtgggacatacaatgatttaaactaataa 33114020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 509 - 561
Target Start/End: Original strand, 16948551 - 16948603
Alignment:
Q  509 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctac 561  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  16948551 aacattttctctaatactcactctcttattgatttaaatcattgtggatctac 16948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 29673618 - 29673522
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    ||||||| | |||||||||||||| ||||| | ||||||||||||||||||||     ||||| |||| ||||||| |||||||||||| |||||||    
T  29673618 actcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacatatattgattttatccaataaaa 29673522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 529 - 625
Target Start/End: Complemental strand, 37525667 - 37525571
Alignment:
Q  529 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||| |  | ||| |||| | |||||||| | ||||||| ||| ||||||||    
T  37525667 ctctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagtg 37525571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 667
Target Start/End: Complemental strand, 931515 - 931374
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||| |||||||||||||||||||||| | || | |||||||||||||| |  | ||| || | |||||||||||| ||  ||  ||||||||||||    
T  931515 tcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatgatgggacatacattgcttccattcaataaaagagtg 931416  T
Q  626 taaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
       ||   ||| || |||||||||||||||||||||| ||||    
T  931415 agtattagagatagagttgaaaagtgagtgttgctagcattc 931374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 625
Target Start/End: Complemental strand, 15468359 - 15468262
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||| |||||  ||||||| ||||||| |||||||| |||||||||||| |  |||||||  |  |||||||||||||| ||| |||||||||||||    
T  15468359 actcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacatacattgattctatttaataaaagagtg 15468262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 622
Target Start/End: Complemental strand, 46335223 - 46335142
Alignment:
Q  541 tttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||||||||| |||| || ||||||||  |||||| |||||||||| ||| ||| |||||||| ||| |||||||||    
T  46335223 tttaaatcattgtgggtctatacattgaaaatataactctgacaaagtggtaggatatagattgatttcatccaataaaaga 46335142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 1286185 - 1286232
Alignment:
Q  259 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  1286185 attatatttcagagataaataatgtacaaccactaatgtgtttatata 1286232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 611
Target Start/End: Original strand, 45179291 - 45179370
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 611  Q
    |||||||  ||||| | ||||||| | ||||||||||||||||||| || |||||||| | | |||||||||||||||||    
T  45179291 tcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatggaacatacattgattttat 45179370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 13114706 - 13114808
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||| ||| ||||| |||||||| ||||| |  |||| |||| |||| |||  | || |||||||| ||||||| ||||||||||||||||||||||    
T  13114706 actcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatccatataaagtggtgggacatatattgattttatctaataaaaga 13114805  T
Q  623 gtg 625  Q
    |||    
T  13114806 gtg 13114808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 41918139 - 41918037
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||| | |||||| ||| ||| ||||||||||||||| |||  |  | |||||||| |||||||||||||||| | | |||||||||    
T  41918139 actcactcttttattgggtaaaatcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaaga 41918040  T
Q  623 gtg 625  Q
    |||    
T  41918039 gtg 41918037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 15928698 - 15928597
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| |||||||||||||||| |||   ||||||| |||||||| ||||||  ||||| ||||  |||||||||  |||  ||| ||||||||||    
T  15928698 actcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtgagacatacatgaattccatcaaataaaagag 15928599  T
Q  624 tg 625  Q
    ||    
T  15928598 tg 15928597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 620
Target Start/End: Complemental strand, 15906573 - 15906458
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||||| ||| ||| ||||| ||  |||||| |||||||||||||  ||||||| |||| |||||||  ||  ||||||| | ||||||||||||    
T  15906573 tttttaacattatctctaatactcattcgtttattgatttaaatcattgtaaatctacattttgtaaattgagttcacacaaagt-gatggacatacatt 15906475  T
Q  604 gattttatctaataaaa 620  Q
    ||||||||  |||||||    
T  15906474 gattttatgcaataaaa 15906458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 625
Target Start/End: Complemental strand, 29418615 - 29418523
Alignment:
Q  534 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||| | |||||| ||| |||||||||||||| |||| ||||||  | ||||||||  || ||||||| |||||||| ||||||||||||    
T  29418615 ttattgggtgaaatcaatgtaggatctacactttggaaatagaactcacataaagtggtgagatatacattaattttatccaataaaagagtg 29418523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 662
Target Start/End: Complemental strand, 35336997 - 35336871
Alignment:
Q  530 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaa 629  Q
    |||||||||||||||||||||||||  |||||| |  ||||||||||| |  ||||||||||     | |||||||||| ||| ||||||| | ||  |     
T  35336997 tctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggt----gagacattgatttcatccaataaaataatg--ag 35336904  T
Q  630 tactagagagtgttgaaaagtgagtgttgctag 662  Q
    | ||||||  |||||||||||||||||||||||    
T  35336903 tgctagaggatgttgaaaagtgagtgttgctag 35336871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 619
Target Start/End: Original strand, 39974237 - 39974326
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 619  Q
    ||||||||||||||||||||||||||||||  |||| |||||      |||||| | |||||| |||| | |||| ||||||||| ||||||||||    
T  39974237 actcactctcttattggtttaaatcattgtaaatctgcactt------ttgaacccatacaaaatggtggaacatccattgatttcatctaataaa 39974326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 579
Target Start/End: Original strand, 12767365 - 12767420
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 579  Q
    ||||||||| |||||||||||||||||| ||  |||||||||| ||||| ||||||    
T  12767365 actcactcttttattggtttaaatcattatgagtctacactttaaaaatagaactc 12767420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 15906679 - 15906632
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattga 575  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||    
T  15906679 actctcttattaatttaaattattgtagatctacactttgaaaattga 15906632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 577
Target Start/End: Complemental strand, 44272051 - 44272008
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||| ||||||||||||| | |||||||||||||||||||||    
T  44272051 ttattgatttaaatcattgttgttctacactttgaaaattgaac 44272008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 625
Target Start/End: Complemental strand, 50539257 - 50539166
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||| ||||||||||||| |  ||||||||  ||||||||||| |  | |||||||| | |||||| ||||||| ||| ||||||||||||    
T  50539257 ttattagtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtg 50539166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 11135883 - 11135781
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | ||||||| |    
T  11135883 actcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaata 11135784  T
Q  623 gtg 625  Q
    |||    
T  11135783 gtg 11135781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 584 - 625
Target Start/End: Complemental strand, 15660976 - 15660935
Alignment:
Q  584 aaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||| |||||| ||||||||||||| ||||||||||||    
T  15660976 aaagtggtgggacatgcattgattttatccaataaaagagtg 15660935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 599
Target Start/End: Complemental strand, 27570366 - 27570293
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 599  Q
    ||||| ||||||| ||| |||||||||||| | |||||||| |||||| |||||  ||||| |||| |||||||    
T  27570366 tcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaaattggtgggacata 27570293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 33113990 - 33114039
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt 553  Q
    ||||||| | ||||||||| ||||||| ||||||| ||||||||||||||    
T  33113990 ttttaaatactttctttaatactcactttcttattagtttaaatcattgt 33114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 577
Target Start/End: Original strand, 47644334 - 47644387
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||| ||||||||||| ||||||||||||||| | ||||| |||||||| ||||    
T  47644334 actcgctctcttattgatttaaatcattgtgggtttacacattgaaaatagaac 47644387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 504 - 625
Target Start/End: Complemental strand, 44274397 - 44274276
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    ||||||| ||| ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||| |||||||||||    
T  44274397 ttttaaatattctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacatacatt 44274298  T
Q  604 gattttatctaataaaagagtg 625  Q
    ||||||||| ||| ||||||||    
T  44274297 gattttatccaatgaaagagtg 44274276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 526 - 625
Target Start/End: Complemental strand, 9470222 - 9470123
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||||    
T  9470222 tcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtg 9470123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 26767798 - 26767941
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| |||||||||||||||||||||  |||||| |||||||||||||| || |||||||||| |||||||||||||||| ||| | |||||||     
T  26767798 actcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtggtgggacatacattgatttcatccagtaaaaga- 26767896  T
Q  624 tgtaaatactagagag--tgttgaaaagtgagtgttgctagtattc 667  Q
     |||| | ||||||||  ||||||||||||||||||||||| ||||    
T  26767897 -gtaagtgctagagagaatgttgaaaagtgagtgttgctagcattc 26767941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 504 - 662
Target Start/End: Original strand, 6980137 - 6980295
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||| ||||| ||| ||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||  |||||||||| | |||||| ||    
T  6980137 ttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacacaaagtggtagaacatacctt 6980236  T
Q  604 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgctag 662  Q
    ||||| ||| ||||||||||||  | | ||  ||||||||||||||||||| |||||||||    
T  6980237 gatttcatccaataaaagagtg--agtgctagagagagtgttgaaaagtgaatgttgctag 6980295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 12989334 - 12989191
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||||||||||| ||||||||| | |||| |||  | ||||||||||| |||||||||||||||| ||| ||| ||||||    
T  12989334 actcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtggtgggacatacattgatttcatccaatgaaagag 12989235  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||        ||||||||||||||||||||||||||||| ||||    
T  12989234 tgagtgagaaagagagtgttgaaaagtgagtgttgctagcattc 12989191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 504 - 667
Target Start/End: Complemental strand, 45554722 - 45554567
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||||| ||| ||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||        ||||||||| |||||||||||    
T  45554722 ttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg--------caaagtggtgggacatacatt 45554631  T
Q  604 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||||| ||| ||||||||||||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  45554630 gatttcatccaataaaagagtg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 620
Target Start/End: Original strand, 25238294 - 25238411
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttaca-aagtggttggacatacat 602  Q
    ||||||||| ||||| ||  ||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |  | | ||||| |  |||||||||    
T  25238294 ttttaaacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacccacaaagaagtgatgagacatacat 25238393  T
Q  603 tgattttatctaataaaa 620  Q
    ||||||||||||||||||    
T  25238394 tgattttatctaataaaa 25238411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 512 - 661
Target Start/End: Original strand, 34142164 - 34142313
Alignment:
Q  512 attttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 611  Q
    ||||||||||| | ||||||||||||||||||||| |||||||  ||||||||||||||||||||| |  ||||||| ||  |||||||||  |||| ||    
T  34142164 attttctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtgagacatacatgaatttcat 34142263  T
Q  612 ctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgcta 661  Q
    | ||||||| |||| |  |   ||||| ||||||||||| ||||||||||    
T  34142264 ccaataaaaaagtgaatgtttgagagattgttgaaaagtaagtgttgcta 34142313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 528 - 599
Target Start/End: Original strand, 7919311 - 7919382
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||| |||||||    
T  7919311 actctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggacata 7919382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 625
Target Start/End: Complemental strand, 19639234 - 19639135
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||||  || | ||| |  ||||||||||||||| ||||||||||| ||||    
T  19639234 tcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtg 19639135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 625
Target Start/End: Complemental strand, 19837827 - 19837728
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||||  || | ||| |  ||||||||||||||| ||||||||||| ||||    
T  19837827 tcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtg 19837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 524 - 657
Target Start/End: Original strand, 35316438 - 35316569
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||| ||||||||||||||| |||||| ||| |||||||||     | ||| |||| ||||||||||| |||||||||||||||||||    
T  35316438 actcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtgggacatacattaattttatctaataaaagag 35316537  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgtt 657  Q
    ||  | || |||||| ||||||||| | ||||||    
T  35316538 tg--agtaatagagaatgttgaaaaataagtgtt 35316569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 557 - 657
Target Start/End: Complemental strand, 2476644 - 2476546
Alignment:
Q  557 tctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgt 656  Q
    |||||| ||||||||||||| |   ||||||| || ||||||||||||||||||||||||||||||  |||| | ||||||| |||||||||||||||||    
T  2476644 tctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaaga--gtaagtgctagagaatgttgaaaagtgagtgt 2476547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 11539569 - 11539465
Alignment:
Q  524 actcactctcttattggtttaaatca-ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatac--attgattttatctaataaaa 620  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||  |||||||| | | ||||||  |||||||| ||| |||||||    
T  11539569 actcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgatttcatccaataaaa 11539470  T
Q  621 gagtg 625  Q
    |||||    
T  11539469 gagtg 11539465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 620
Target Start/End: Original strand, 12098895 - 12099000
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcatt-gtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatcta 614  Q
    ||||||| ||||||||||||||| |||||||||||| |||  | ||||||||||||||||||||| ||||||||||   ||||||| ||||||| ||| |    
T  12098895 tctttaatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaattgaactcatacaaagtggcgagacatactttgatttcatcaa 12098994  T
Q  615 ataaaa 620  Q
    ||||||    
T  12098995 ataaaa 12099000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 528 - 608
Target Start/End: Complemental strand, 38464302 - 38464222
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |   ||||||| |  |||||||||||||||    
T  38464302 actctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagacatacattgattt 38464222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 10981661 - 10981582
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| |||| |||| |  |||||||||| |||||||||||    
T  10981661 actcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacatt 10981582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 533 - 667
Target Start/End: Original strand, 18511255 - 18511389
Alignment:
Q  533 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg-taaata 631  Q
    |||||||||||||| |||||| | ||| ||||||||||||||||| |  | ||| | || |||||||||||||||||||| ||||||||||||    |||    
T  18511255 cttattggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgata 18511354  T
Q  632 ctagagagtgttgaaaagtgagtgttgctagtattc 667  Q
     | ||||||||| |||||||||||||||||| ||||    
T  18511355 gt-gagagtgttaaaaagtgagtgttgctagcattc 18511389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 588
Target Start/End: Original strand, 472192 - 472264
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagt 588  Q
    ||||||| |||| ||||||||||||||||||||||||||||| || | ||||||||||||||||  |||||||    
T  472192 tctttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcacacaaagt 472264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 504 - 662
Target Start/End: Original strand, 16719447 - 16719605
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 603  Q
    |||| |||||||| ||||| ||||| | |  |||||||||||||||||| || |||||| ||||||||||||||    |  || |||| ||| |||||||    
T  16719447 tttttaacattttgtttaatactcatttttgtattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacatt 16719546  T
Q  604 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctag 662  Q
    ||||| ||||||||||||||| |       ||| |||||||||||||||||||||||||    
T  16719547 gatttcatctaataaaagagtatgtgctaaagacagtgttgaaaagtgagtgttgctag 16719605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 518 - 620
Target Start/End: Complemental strand, 30849386 - 30849284
Alignment:
Q  518 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 617  Q
    ||||| || |||| |||||||| ||||||||||||||||| ||  |||| ||||| |||| | |||||| |||| |||| ||||||||||| ||||||||    
T  30849386 tttaatacgcactttcttattgatttaaatcattgtggatttatcctttaaaaatagaacccatacaaattggtgggacgtacattgatttcatctaata 30849287  T
Q  618 aaa 620  Q
    |||    
T  30849286 aaa 30849284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 534 - 624
Target Start/End: Complemental strand, 32701603 - 32701513
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 624  Q
    |||||||||||||||||| ||||| ||||| || ||||||||||    | |||||||| ||| |||||||||||||||| |||||||||||    
T  32701603 ttattggtttaaatcattatggatttacacgttaaaaattgaacatacataaagtggtgggatatacattgattttatccaataaaagagt 32701513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 534 - 620
Target Start/End: Original strand, 37652292 - 37652378
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||    |||||| ||| | |||||||||||||| |||||||||||    
T  37652292 ttattggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacatacattgatttcatctaataaaa 37652378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 658
Target Start/End: Complemental strand, 17188198 - 17188076
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 633  Q
    |||||||||||||||||| |||  ||||||||||||||||||  ||  ||||||||||  || | |||||||||| ||| ||||||| ||||  | |  |    
T  17188198 ttattggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtgagatacacattgatttcatccaataaaatagtg--agtgat 17188101  T
Q  634 agagagtgttgaaaagtgagtgttg 658  Q
    |||||| ||||||||||||||||||    
T  17188100 agagagagttgaaaagtgagtgttg 17188076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 32856172 - 32856319
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||||||| ||| |  ||||||||||   ||||| ||| |||| |||  |||||||||    
T  32856172 actcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtggtgaaacatatattaatttcatccgataaaagag 32856271  T
Q  624 t--gtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    |  ||   ||||  |||||||||| |||||||||||||| ||| ||||    
T  32856272 tcagtgcgtactggagagagtgttcaaaagtgagtgttgttagcattc 32856319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 657
Target Start/End: Original strand, 36471875 - 36472008
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| |||||||||||||||||||||  | |||| |||||||||||||  | || ||||||||  ||||||| ||||||| ||| ||||| |||     
T  36471875 actcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcatccaataagagat 36471974  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgtt 657  Q
    ||    |   ||||||||||||||||||||||||    
T  36471975 tgagtgtcagagagagtgttgaaaagtgagtgtt 36472008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 572
Target Start/End: Original strand, 4552877 - 4552925
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaat 572  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  4552877 actcactctcttattggtttaaatcattgtgggtctacacattgaaaat 4552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 25476329 - 25476432
Alignment:
Q  198 ggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgt 297  Q
    ||||||||||||| |||| ||||    ||||  |||||||||||||| ||||||||| || ||||||||||| ||||||| |||  ||||| ||||||||    
T  25476329 ggtttatgcggaagcaaggcccctagtgatcgagagctctgatgccatgtgaaaactgaagattatatttcaaagataaataatttacaaccactaatgt 25476428  T
Q  298 gttt 301  Q
    ||||    
T  25476429 gttt 25476432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 574
Target Start/End: Original strand, 14489564 - 14489626
Alignment:
Q  512 attttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattg 574  Q
    ||||||| ||| ||||| ||| |||||||||||||| |||||||||||||||||| |||||||    
T  14489564 attttctctaatactcattcttttattggtttaaattattgtggatctacactttaaaaattg 14489626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 598
Target Start/End: Complemental strand, 15884564 - 15884498
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacat 598  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||| |  |||||||||| ||||||    
T  15884564 tcttattggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtgggacat 15884498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 17508921 - 17508848
Alignment:
Q  233 gctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    |||||||| ||| ||||||| | || ||||||||||||| ||||| |||| ||||| |||||||||||||||||    
T  17508921 gctctgataccatgtgaaaattgaatattatatttcagaaataaataatgtacaaccactaatgtgtttatata 17508848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 43414498 - 43414402
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    |||||| ||||| |||||||||||||||||||||||| ||| ||||||| | |||    |||| |||| | |||||||||||||| ||| |||||||    
T  43414498 actcaccctcttcttggtttaaatcattgtggatctatactctgaaaatagcacttacgcaaaatggtagaacatacattgatttcatccaataaaa 43414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 28898073 - 28898175
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||| | |||||| ||| |||||||||||||| ||||  ||| |  | |||||||| |||||||||||||||| | | |||||||||    
T  28898073 actcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtggtgggacatacattgatttcacccaataaaaga 28898172  T
Q  623 gtg 625  Q
    |||    
T  28898173 gtg 28898175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 625
Target Start/End: Original strand, 41805873 - 41805914
Alignment:
Q  584 aaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  41805873 aaagtggtgggacatacattgattttatccaataaaagagtg 41805914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 662
Target Start/End: Original strand, 24895303 - 24895440
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| | ||||| |||||||| ||||| || ||||||||| |||| ||||||  | ||| |||| | | |||||||||||||||| | |||||||    
T  24895303 actcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtggaatatacattgattttatccattaaaaga 24895402  T
Q  623 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 662  Q
    |||  | || |||||| |||  ||||| ||||||||||||    
T  24895403 gtg--agtattagagactgtccaaaagagagtgttgctag 24895440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 25730456 - 25730506
Alignment:
Q  504 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtg 554  Q
    ||||||||||||| ||||| | ||||||| |||||||||||||||| ||||    
T  25730456 ttttaaacattttttttaatattcactcttttattggtttaaatcactgtg 25730506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 572
Target Start/End: Original strand, 30718374 - 30718412
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaat 572  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  30718374 ttattggtttaaatcattgtgagtctacactttgaaaat 30718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 625
Target Start/End: Complemental strand, 42183029 - 42182931
Alignment:
Q  528 actctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | ||||||||||||    
T  42183029 actcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtg 42182931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 38500282 - 38500219
Alignment:
Q  246 gtgaaaactaaacattatatttcaga---gataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||| || |||||||||||||   |||||| |||| ||||| |||||||||||||||||    
T  38500282 gtgaaaactgaatattatatttcagacgagataaataatgtacaaccactaatgtgtttatata 38500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 9e-32; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 524 - 669
Target Start/End: Complemental strand, 46517434 - 46517291
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||||||||| |  ||| | |||| ||| |||||||||||||||| |||||| |||    
T  46517434 actcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatccaataaatgag 46517335  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattcat 669  Q
    ||  | | |||||||||||| |||||||||||||||||| ||||||    
T  46517334 tg--agtgctagagagtgttaaaaagtgagtgttgctagcattcat 46517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 524 - 612
Target Start/End: Complemental strand, 27888425 - 27888337
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatc 612  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||| ||||||||||||||||||||    
T  27888425 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattgattttatc 27888337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 527 - 667
Target Start/End: Original strand, 31502504 - 31502644
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 626  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| |  ||||| |||| |||||||| ||||||| ||| ||||||||||||     
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaagagtga 31502603  T
Q  627 aaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
       |   ||||| ||||||||||||||||||||||| ||||    
T  31502604 gtgttagagagactgttgaaaagtgagtgttgctagcattc 31502644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 32205219 - 32205079
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||| |||||||||||||| || ||| ||||| |||||||||| |  ||||| |||| |||||||||||||||| ||| ||||||||||    
T  32205219 actcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtaggacatacattgatttcatccaataaaagag 32205120  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | ||  |||||||||| |||||||||||||||||| ||||    
T  32205119 tg--agta-gagagagtgttcaaaagtgagtgttgctagcattc 32205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 22190082 - 22189939
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||||||||||| |  |||||||||| || ||||||||||||| ||| ||||||||||    
T  22190082 actcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgggccatacattgatttcatccaataaaagag 22189983  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | ||  ||||||||||||||| |||||||| |||| ||||    
T  22189982 tg--agtgctagagagagtgttgaaaaatgagtgtttctagcattc 22189939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 516 - 657
Target Start/End: Complemental strand, 7459494 - 7459353
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||| | |||||||||||| |||  | |||||||| | | |||||||||||||||| ||    
T  7459494 tctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacataaagtggtggaatatacattgattttatcgaa 7459395  T
Q  616 taaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 657  Q
    ||||||| ||   ||  |||||| |||| |||||||||||||    
T  7459394 taaaagaatgagtattatagagaatgttaaaaagtgagtgtt 7459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 486 - 620
Target Start/End: Original strand, 25686838 - 25686968
Alignment:
Q  486 ttagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaa 585  Q
    ||||||||||||||||    || |||||| | | ||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||||| | || ||    
T  25686838 ttagcaacactctctt----ttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaaa 25686933  T
Q  586 agtggttggacatacattgattttatctaataaaa 620  Q
    ||||||  ||||||||||||||| ||| |||||||    
T  25686934 agtggtatgacatacattgatttcatcaaataaaa 25686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 519 - 667
Target Start/End: Complemental strand, 33008252 - 33008104
Alignment:
Q  519 ttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 618  Q
    |||| |||| |||| |||||||||||||||||||||| ||||||| ||| |||| |||| |  |||||||||| ||||||||| |||||| ||| |||||    
T  33008252 ttaatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacaatgatttcatccaataa 33008153  T
Q  619 aagagtgtaaatactagag--agtgttgaaaagtgagtgttgctagtattc 667  Q
    |||||||  | | ||||||  |||||| |||||||||||||||||| ||||    
T  33008152 aagagtg--agtgctagagatagtgttcaaaagtgagtgttgctagcattc 33008104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 625
Target Start/End: Complemental strand, 7775140 - 7775042
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||| |||||| |||||||||||| ||| || ||||||||||||||||||||  |||||||||| |||||||||||||||| ||| ||||||||||||    
T  7775140 tcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatccaataaaagagtg 7775042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 524 - 662
Target Start/End: Original strand, 12263473 - 12263611
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |    |||||||| | |||||||||||||||  |||  |||||||||    
T  12263473 actcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacatacattgattccatccgataaaagag 12263572  T
Q  624 tgta-aatactagagagtgttgaaaagtgagtgttgctag 662  Q
    || |  |||  ||||||||||||||||| |||||||||||    
T  12263573 tggatgata-gagagagtgttgaaaagtaagtgttgctag 12263611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 524 - 658
Target Start/End: Complemental strand, 27949416 - 27949282
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||  ||||| |||| |||||||  ||||||| ||| |||| |||||    
T  27949416 actcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatggtaggacataacttgatttcatccaatacaagag 27949317  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttg 658  Q
    ||    |   |||||||||| ||||||||||||||    
T  27949316 tgagtgttagagagagtgttaaaaagtgagtgttg 27949282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 516 - 608
Target Start/End: Complemental strand, 6442316 - 6442224
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |  ||||| |||| | ||||||||||||||    
T  6442316 tctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatggtggaacatacattgattt 6442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 14795274 - 14795131
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    | ||| |||| |||||||||||||||| ||| ||||||| ||    
T  14795274 actcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaag 14795175  T
Q  624 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  14795174 tgactgata-gagagagtgttgaaaagtgagtgttgctagcattc 14795131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 15242266 - 15242123
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    | ||| |||| |||||||||||||||| ||| ||||||| ||    
T  15242266 actcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaag 15242167  T
Q  624 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  15242166 tgactgata-gagagagtgttgaaaagtgagtgttgctagcattc 15242123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 524 - 622
Target Start/End: Original strand, 32212907 - 32213004
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| |||||||||| | |||||||| ||  ||||||||||||||| ||| |||||||||    
T  32212907 actcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaaga 32213004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 11692322 - 11692221
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||| |||| |||||||||| ||||  | |||||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||||||    
T  11692322 actcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtggtaggacatacattgatttcatccaataaaagag 11692223  T
Q  624 tg 625  Q
    ||    
T  11692222 tg 11692221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 11824214 - 11824113
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| |||||||| ||||||||||||||| | ||||||||||||||||||     ||||| |||| |||||||||||||||| ||| ||||||||||    
T  11824214 actcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatccaataaaagag 11824115  T
Q  624 tg 625  Q
    ||    
T  11824114 tg 11824113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 48374476 - 48374617
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||| ||||||||||| ||||||  | ||||||||| |||| |||| | || |||||||| |||||| |||  |||  ||  ||||||||||    
T  48374476 actcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtggtgggacatgcatgaattccattcaataaaagag 48374575  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | |||||||||||||| |||||||||||||||||| ||||    
T  48374576 tg--agtactagagagtgttcaaaagtgagtgttgctagcattc 48374617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 528 - 611
Target Start/End: Original strand, 23564076 - 23564159
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 611  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||| |||||| |||||||||||  |||||||||| |||||||    
T  23564076 actcttttattggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacatacattaattttat 23564159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 524 - 661
Target Start/End: Original strand, 19422871 - 19423008
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| |      ||||| | ||| |||||||||||||||| ||| ||| ||||||    
T  19422871 actcactcttttattggtttaaatcattgtggatctacacttcgaaaatagtgacaatacaatggggtgggacatacattgatttcatccaatgaaagag 19422970  T
Q  624 tg-taaatactagagagtgttgaaaagtgagtgttgcta 661  Q
    ||    |||  ||||||||||||||||||||||||||||    
T  19422971 tgagtgata-gagagagtgttgaaaagtgagtgttgcta 19423008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 662
Target Start/End: Complemental strand, 39254234 - 39254088
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| |||||||||||||||| ||||||| ||||||| |||||| ||| ||||||||||    ||||||||||   ||||||||| |||||||  ||    
T  39254234 tctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtgaaacatacattaattttattcaa 39254135  T
Q  616 taaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctag 662  Q
    ||||||||||       |||||| ||||||||||||| |||||||||    
T  39254134 taaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctag 39254088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 652
Target Start/End: Original strand, 32178843 - 32178966
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||| ||||||||||||||  | |||||||||||||||||| |   ||| |||||| | ||||||||| |||| ||| ||||||| |  |    
T  32178843 tcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaa-taaaacagagtggtggaacatacattaatttcatccaataaaata--g 32178939  T
Q  626 taaatactagagagtgttgaaaagtga 652  Q
    ||| | |||||||||||||||||||||    
T  32178940 taagtgctagagagtgttgaaaagtga 32178966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 39364335 - 39364420
Alignment:
Q  197 gggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatg 282  Q
    |||||||||||||| |||| |||| |||||||||||||||||||  || ||||||||| ||  |||||||||| ||||||| ||||    
T  39364335 gggtttatgcggaagcaaggcccctcaagatcaggagctctgatatcatgtgaaaactgaatgttatatttcaaagataaataatg 39364420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 44350839 - 44350940
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||||    ||||||||    ||||||||||||||| ||| ||||||| ||    
T  44350839 actcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaacaaagtgacgagacatacattgatttgatccaataaaaaag 44350938  T
Q  624 tg 625  Q
    ||    
T  44350939 tg 44350940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 622
Target Start/End: Original strand, 10933996 - 10934100
Alignment:
Q  518 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 617  Q
    ||||| ||||| ||||||||| |||||||||||||||| | || |||||| |||| |||  | |||||||||||  |||||| ||| |||||||| ||||    
T  10933996 tttaatactcaatctcttattagtttaaatcattgtgggtttatactttggaaatagaaaccatacaaagtggtgagacatatattaattttatccaata 10934095  T
Q  618 aaaga 622  Q
    |||||    
T  10934096 aaaga 10934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 556 - 667
Target Start/End: Complemental strand, 12271096 - 12270988
Alignment:
Q  556 atctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtg 655  Q
    ||||||||||||||||| |||| |  |||||||||| |||||||||||||||| |||| ||||||||||| |     ||||||||||||||||||  |||    
T  12271096 atctacactttgaaaatagaac-cacacaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaaaagt--gtg 12271000  T
Q  656 ttgctagtattc 667  Q
    ||||||| ||||    
T  12270999 ttgctagcattc 12270988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 534 - 658
Target Start/End: Original strand, 25092708 - 25092832
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 633  Q
    |||||||||||||| ||||||  |||| |||| |||||||||||||  ||||||| || |||||||||||||||  ||| ||| ||||||||            
T  25092708 ttattggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcgga 25092807  T
Q  634 agagagtgttgaaaagtgagtgttg 658  Q
    |||||||||||||||||||||||||    
T  25092808 agagagtgttgaaaagtgagtgttg 25092832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 24539159 - 24539261
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||||| ||||| |||||||| ||||| || |||| |||| |||| |||  | || |||||||| ||||||| |||||||||||| |||||||||    
T  24539159 actcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtggtgggacatatattgattttatccaataaaaga 24539258  T
Q  623 gtg 625  Q
    |||    
T  24539259 gtg 24539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 577
Target Start/End: Original strand, 36845567 - 36845612
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaac 36845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 625
Target Start/End: Original strand, 19494385 - 19494477
Alignment:
Q  534 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||| | |||||| ||| ||||||||||||||||||| |||| |  | |||||||| |||||||||||||||| | | ||||||||||||    
T  19494385 ttattgggtgaaatcaatgtaggatctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtg 19494477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 658
Target Start/End: Original strand, 44510999 - 44511107
Alignment:
Q  550 ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgttgaaa 647  Q
    |||||||||||||| ||||||||||||| |  |||||||| |  ||||||||||||||| ||| ||||||| ||||  | | ||  ||||||||||||||    
T  44510999 ttgtggatctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtg--agtgctagagagagtgttgaaa 44511096  T
Q  648 agtgagtgttg 658  Q
    ||| |||||||    
T  44511097 agtaagtgttg 44511107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 625
Target Start/End: Complemental strand, 17749838 - 17749736
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||||| ||||| |||||||| ||||| || |||| |||| ||||  ||  | || |||||||| ||||||| |||||||||||| |||||||||    
T  17749838 actcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtggtgggacatatattgattttatccaataaaaga 17749739  T
Q  623 gtg 625  Q
    |||    
T  17749738 gtg 17749736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 566
Target Start/End: Complemental strand, 1316431 - 1316374
Alignment:
Q  509 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctacacttt 566  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||  || ||||||||    
T  1316431 aacattttctctaatactcactcttttattggtttaaatcattgtaaatgtacacttt 1316374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 577
Target Start/End: Original strand, 6580039 - 6580092
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||||||||||||||||||||| ||||||| || | | ||||||||||||||    
T  6580039 actcactctcttattggtttaaattattgtgggtccatattttgaaaattgaac 6580092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 667
Target Start/End: Original strand, 8073367 - 8073468
Alignment:
Q  566 tgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactag--agagtgttgaaaagtgagtgttgctagt 663  Q
    |||||||||||||   |||||||||| |||||||||||||||| |||  |||||||||||  | | ||||  ||| ||||||||| |||||||| |||||    
T  8073367 tgaaaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtg--agtgctaggaagaatgttgaaaaatgagtgttactagt 8073464  T
Q  664 attc 667  Q
    ||||    
T  8073465 attc 8073468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 609
Target Start/End: Complemental strand, 9649059 - 9648982
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttt 609  Q
    |||||||||||||||||||||||| | ||||| ||| |||  |||| |  |||||||||| | |||||||||||||||    
T  9649059 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgatttt 9648982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 562
Target Start/End: Original strand, 36845530 - 36845566
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctaca 562  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36845530 tcactctcttattggtttaaatcattgtgggtctaca 36845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 555
Target Start/End: Complemental strand, 12167358 - 12167319
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtgg 555  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  12167358 tctttaatactcactttcttattggtttaaatcattgtgg 12167319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 622
Target Start/End: Original strand, 17354563 - 17354662
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||| | ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| ||| |||||||||    
T  17354563 actcacttttttattgggtaaaatcaatgtaggacctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaaga 17354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 602
Target Start/End: Complemental strand, 1688126 - 1688048
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacat 602  Q
    ||||||||| ||||||| ||||||| |||| | ||||||||||| ||||  ||||| | |||||||||  |||||||||    
T  1688126 actcactcttttattgggttaaatcgttgtaggtctacactttggaaataaaactcatgcaaagtggtgagacatacat 1688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 25428515 - 25428617
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||| | |||||| ||| |||||||||||||| ||||  ||| |  | |||||||| |||||||||||||||| |   |||||||||    
T  25428515 actcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaacccacataaagtggtgggacatacattgatttcacacaataaaaga 25428614  T
Q  623 gtg 625  Q
    |||    
T  25428615 gtg 25428617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 566
Target Start/End: Complemental strand, 31874159 - 31874117
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacacttt 566  Q
    |||||||||||||| ||||||||||||||||  ||||||||||    
T  31874159 actcactctcttataggtttaaatcattgtgagtctacacttt 31874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 577
Target Start/End: Original strand, 3855851 - 3855900
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    ||||| |||||||||||||||||||| | |||  ||||||||||||||||    
T  3855851 actcttttattggtttaaatcattgtaggtctgaactttgaaaattgaac 3855900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 608
Target Start/End: Complemental strand, 13919924 - 13919839
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    ||||||||  ||||||| | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| ||||||||||||||||    
T  13919924 actcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgattt 13919839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 10142013 - 10142154
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||| ||||||| ||||| | |||||||||||||||| ||||    |||||||||| |||||||||||||||||||| ||||||||||    
T  10142013 actcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattttatccaataaaagag 10142112  T
Q  624 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  | | ||| ||||||||||||| ||||||||||||| ||||    
T  10142113 tg--agtgctatagagtgttgaaaaatgagtgttgctagcattc 10142154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 524 - 667
Target Start/End: Original strand, 28490759 - 28490902
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||   |||||||||| |||||||| ||||||| ||| ||||||| ||    
T  28490759 actcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaag 28490858  T
Q  624 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 667  Q
    ||  ||| ||  ||||||| ||||||||||| ||||||||| ||||    
T  28490859 tg--aatgctagagagagttttgaaaagtgactgttgctagcattc 28490902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 525 - 618
Target Start/End: Complemental strand, 39246750 - 39246657
Alignment:
Q  525 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 618  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||  |||||||||| |||||||||||||||||||| |||||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataa 39246657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 625
Target Start/End: Complemental strand, 34368500 - 34368402
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||| | |||||||||| ||||||| ||| ||||||||    
T  34368500 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtg 34368402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 5413774 - 5413875
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| | |||||||||||||||||| ||| ||||||||||| ||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  5413774 actcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaaagag 5413873  T
Q  624 tg 625  Q
    ||    
T  5413874 tg 5413875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 516 - 625
Target Start/End: Original strand, 25710501 - 25710610
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| | ||| |||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||||| |||||||||||||||| |   ||    
T  25710501 tctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattgatttcacacaa 25710600  T
Q  616 taaaagagtg 625  Q
    ||||||||||    
T  25710601 taaaagagtg 25710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 526 - 661
Target Start/End: Original strand, 28090268 - 28090401
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||| ||||||  |||||||| || ||||| || |  |    
T  28090268 tcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatgaattgatttcatataatataata--g 28090365  T
Q  626 taaatactagagagtgttgaaaagtgagtgttgcta 661  Q
    ||| |  |||||||||||||||| | ||||||||||    
T  28090366 taagtgatagagagtgttgaaaaataagtgttgcta 28090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 625
Target Start/End: Original strand, 17537141 - 17537240
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||    | ||| |||| |||||||||||||||| ||| ||||||||||||    
T  17537141 tcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaaataaaagagtg 17537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 532 - 625
Target Start/End: Original strand, 41330438 - 41330531
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    |||||||| | ||||||||||| |||| ||||||||||||||||    
T  41330438 tcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatacattaatttcatctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 625
Target Start/End: Complemental strand, 43405534 - 43405435
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||||||||||| ||||||||||||||| ||||||||||| |||| ||||   |||||||||||  ||||||||||||||| ||  ||||||||||||    
T  43405534 tcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatttcattcaataaaagagtg 43405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 527 - 625
Target Start/End: Original strand, 27592492 - 27592590
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||||||| ||| ||||||| ||||    
T  27592492 cactctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtg 27592590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 524 - 626
Target Start/End: Complemental strand, 37455491 - 37455390
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||||||||||||||||||||| | ||||||  ||||||||||||||||||||| |  ||||| |||| | |||||||||||||||||| |||||| |||    
T  37455491 actcactctcttattggtttaatt-attgtgagtctacactttgaaaattgaacccccacaaaatggtggaacatacattgattttatcgaataaatgag 37455393  T
Q  624 tgt 626  Q
    |||    
T  37455392 tgt 37455390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 30325911 - 30326012
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| | || ||||||  | ||||||||  ||||||||||||||| ||| ||||||| ||    
T  30325911 actcactttcttattggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatag 30326010  T
Q  624 tg 625  Q
    ||    
T  30326011 tg 30326012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 532 - 622
Target Start/End: Original strand, 28434863 - 28434951
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    |||||||||||||||||||||||| |||| |||||||||||||||  |  ||| |||||| ||||||| |||||||||||| |||||||||    
T  28434863 tcttattggtttaaatcattgtgggtctaaactttgaaaattgaa--ccaacacagtggtgggacatatattgattttatccaataaaaga 28434951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 624
Target Start/End: Original strand, 41105607 - 41105707
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    |||| ||||||||||||||||||||| ||||| | | ||||||||||||||||| |  ||||||| || |||||| | ||||||| ||| ||||||||||    
T  41105607 actcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagtgggacatcccttgatttcatccaataaaagag 41105706  T
Q  624 t 624  Q
    |    
T  41105707 t 41105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 667
Target Start/End: Original strand, 28611819 - 28611958
Alignment:
Q  528 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgta 627  Q
    ||||| |||||| ||||||||||||||  |||||||||| ||||| |||||| ||||||||| | ||||||||| || || |||| ||| |||||||| |    
T  28611819 actcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaaagtgatgggacatacactggttatatccaatgaaagagtgaa 28611918  T
Q  628 aatactagagagtgttgaaaagtgagtgttgctagtattc 667  Q
      |   |||||||| | |||||||||||||| ||| ||||    
T  28611919 tgttagagagagtgctcaaaagtgagtgttgttagcattc 28611958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 622
Target Start/End: Original strand, 34384720 - 34384826
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| ||||||||| |||| ||| ||||||||||||  |||| | ||||||||||||||||  ||||| | || |||||||||||||||| | | ||    
T  34384720 tctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggacatacattgatttcacccaa 34384819  T
Q  616 taaaaga 622  Q
    |||||||    
T  34384820 taaaaga 34384826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 1678916 - 1679066
Alignment:
Q  161 cgaaaaaagcaaaagtaattgcaaggactgcaactagggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacat 260  Q
    ||||||||||||||||||  |||| | | ||  ||| |||||||| |||| |||| ||||| |||||||  ||||  ||||||| ||||||||  |  ||    
T  1678916 cgaaaaaagcaaaagtaaacgcaaaggcggcggctaaggtttatgtggaagcaaggccccctaagatcaaaagcttcgatgccatgtgaaaacatactat 1679015  T
Q  261 tatatttcagagat---aaaaaatgcacaactactaatgtgtttatatata 308  Q
    ||||||||||||||   |||||||| ||||| |||||| ||||||||||||    
T  1679016 tatatttcagagataaaaaaaaatgtacaaccactaatatgtttatatata 1679066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 532 - 620
Target Start/End: Original strand, 1923597 - 1923685
Alignment:
Q  532 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||||  ||||||||||  ||||||||||  ||  |||||||||||    
T  1923597 tcttattggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgtgacatacattctttgcatctaataaaa 1923685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 526 - 662
Target Start/End: Complemental strand, 25630948 - 25630812
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||| ||| ||||||||||||||| |||| |||||||||||||||||||||   |||||| | || ||| ||||||| |||||||  ||||||| |||     
T  25630948 tcactttctaattggtttaaatcatcgtgggtctacactttgaaaattgaacctatacaaaatagtgggatatacattaattttattaaataaaatagta 25630849  T
Q  626 taaatactagagagtgttgaaaagtgagtgttgctag 662  Q
     |  |   ||||||||||||||||| ||| |||||||    
T  25630848 aatgttaaagagagtgttgaaaagtaagtattgctag 25630812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 577
Target Start/End: Original strand, 31885878 - 31885921
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  31885878 ttattggtttaaatcattgtagatctacactttgaaaattgaac 31885921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 618
Target Start/End: Original strand, 10666717 - 10666819
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| | |||||||||||||||||||||| | ||||  |||||| ||| ||||| |||| |  | |||||||| ||| ||||| |||||||||||||    
T  10666717 tctttaacattcactctcttattggtttaaattaatgtgagtctacaatttaaaaatggaacccacataaagtggtaggatatacaatgattttatctaa 10666816  T
Q  616 taa 618  Q
    |||    
T  10666817 taa 10666819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 659
Target Start/End: Original strand, 17434888 - 17435019
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||| |||||||||||||||| ||||| ||||||||||  |||| |||||| |||||| | || | ||||| |||  ||| ||| |||||||| | |    
T  17434888 tcactcttttattggtttaaatcaatgtgggtctacactttagaaatagaactcatacaaaatagtagaacatatatttgtttaatccaataaaagtgag 17434987  T
Q  626 taaatactagagagtgttgaaaagtgagtgttgc 659  Q
    |||  |  ||||||||||||||||| ||||||||    
T  17434988 taataa--agagagtgttgaaaagtaagtgttgc 17435019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 624
Target Start/End: Original strand, 28155746 - 28155837
Alignment:
Q  531 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 624  Q
    ||||||||||| |||| |||||||  ||||||||||||||||| ||| | || ||| |||||| |||||||||||||| ||  |||||||||||    
T  28155746 ctcttattggtataaaacattgtg--tctacactttgaaaattaaacccataaaaaatggttgaacatacattgatttcattcaataaaagagt 28155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 625
Target Start/End: Original strand, 42224627 - 42224729
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | |||||||||||    
T  42224627 actcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaaga 42224726  T
Q  623 gtg 625  Q
    |||    
T  42224727 gtg 42224729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 28223813 - 28223864
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattga 575  Q
    ||||||||| |||||||||||||||||| ||| |||| ||||||||||||||    
T  28223813 actcactcttttattggtttaaatcattatgggtctatactttgaaaattga 28223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 534 - 577
Target Start/End: Original strand, 36337937 - 36337980
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  36337937 ttattggtttaaatcattgtgggtctacactttggaaattgaac 36337980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 608
Target Start/End: Complemental strand, 10950223 - 10950145
Alignment:
Q  530 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    ||||||||| |||||||||||| ||  |||| ||||||||||| |||  | |||||| |||| ||||||||||||||||    
T  10950223 tctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgattt 10950145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 534 - 608
Target Start/End: Complemental strand, 25919344 - 25919270
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 608  Q
    |||||||||||||||||||||  ||||||||||||||||||| | |  ||||| ||||  |||||| ||||||||    
T  25919344 ttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacatatattgattt 25919270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 577
Target Start/End: Complemental strand, 14553655 - 14553602
Alignment:
Q  524 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 577  Q
    |||||||||||| ||||||||| | ||||||| |||||||||| ||||||||||    
T  14553655 actcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaac 14553602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 623
Target Start/End: Complemental strand, 43541956 - 43541895
Alignment:
Q  562 actttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 623  Q
    ||||||||||||||||||  |||||||| |  ||||||||||||||||||  ||||||||||    
T  43541956 actttgaaaattgaactcacacaaagtgatgagacatacattgattttattcaataaaagag 43541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 623
Target Start/End: Complemental strand, 24915199 - 24915099
Alignment:
Q  524 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 622  Q
    ||||||||| ||||||| | |||||| ||| |||  |||||||||||||| |||| |  | |||||||| ||||||| |||||||| | |||||||||||    
T  24915199 actcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacatatattgatttcacctaataaaaga 24915100  T
Q  623 g 623  Q
    |    
T  24915099 g 24915099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 620
Target Start/End: Complemental strand, 2525715 - 2525621
Alignment:
Q  526 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 620  Q
    |||||||||||||  ||||||||||| || || |||||||||||||  ||| ||  ||||||||||   | |||||||||||| ||| |||||||    
T  2525715 tcactctcttattaatttaaatcattatgtatttacactttgaaaacagaaatcacacaaagtggtgatagatacattgatttcatccaataaaa 2525621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 4427375 - 4427321
Alignment:
Q  534 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagt 588  Q
    ||||| |||||||||||||||  ||||||||||||||||| || || ||||||||    
T  4427375 ttatttgtttaaatcattgtgagtctacactttgaaaattaaattcatacaaagt 4427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 516 - 621
Target Start/End: Complemental strand, 27963 - 27858
Alignment:
Q  516 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 615  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |  |||||||||| |||||||||||||||  ||| ||    
T  27963 tctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtggtgggacatacattgattccatccaa 27864  T
Q  616 taaaag 621  Q
    ||||||    
T  27863 taaaag 27858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 527 - 625
Target Start/End: Original strand, 26902 - 27000
Alignment:
Q  527 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    |||||| ||||||||||||| |||| ||| ||||| ||||||||||||||| |  |||||||||| | ||||||||||||||  || ||||| ||||||    
T  26902 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtg 27000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 530 - 625
Target Start/End: Complemental strand, 9801 - 9706
Alignment:
Q  530 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||| |||||||| ||||||  |||||||||| |||||||||| |  ||||| |||| ||| |||||||||||| ||| ||||||| ||||    
T  9801 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 9706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 530 - 625
Target Start/End: Complemental strand, 11347 - 11252
Alignment:
Q  530 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 625  Q
    ||||||||| |||||||| ||||||  |||||||||| |||||||||| |  ||||| |||| ||| |||||||||||| ||| ||||||| ||||    
T  11347 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 11252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 12452 - 12499
Alignment:
Q  259 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  12452 attatatttcagagataaataatgtacaaccactaatgtgtttatata 12499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 18995 - 18936
Alignment:
Q  247 tgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 306  Q
    ||||||||||| ||||||||| ||||||||| |||| ||||| | |||||||||||||||    
T  18995 tgaaaactaaatattatattttagagataaataatgtacaaccattaatgtgtttatata 18936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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