View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13443_high_21 (Length: 324)

Name: NF13443_high_21
Description: NF13443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13443_high_21
NF13443_high_21
[»] chr8 (24 HSPs)
chr8 (1-324)||(22907264-22907588)
chr8 (83-324)||(17345540-17345782)
chr8 (209-324)||(5238184-5238300)
chr8 (209-324)||(24661298-24661414)
chr8 (209-324)||(43685643-43685759)
chr8 (87-324)||(24548956-24549195)
chr8 (80-324)||(43373518-43373761)
chr8 (87-324)||(6774296-6774535)
chr8 (87-324)||(16193766-16194005)
chr8 (80-324)||(16405025-16405268)
chr8 (80-324)||(21844610-21844856)
chr8 (80-324)||(21852003-21852249)
chr8 (70-324)||(24928841-24929096)
chr8 (1-54)||(5238144-5238197)
chr8 (1-54)||(24661401-24661454)
chr8 (1-54)||(43685603-43685656)
chr8 (80-299)||(222754-222975)
chr8 (80-299)||(736377-736598)
chr8 (80-299)||(860272-860493)
chr8 (80-305)||(30120690-30120917)
chr8 (70-224)||(23837154-23837308)
chr8 (72-153)||(13662481-13662561)
chr8 (84-133)||(16674624-16674672)
chr8 (69-106)||(41246613-41246650)
[»] chr4 (24 HSPs)
chr4 (1-324)||(26680089-26680413)
chr4 (84-324)||(15675139-15675381)
chr4 (87-324)||(31115603-31115842)
chr4 (69-324)||(13246386-13246643)
chr4 (69-324)||(54118294-54118551)
chr4 (209-324)||(10488659-10488775)
chr4 (209-324)||(16327976-16328092)
chr4 (84-324)||(10104300-10104523)
chr4 (80-324)||(10644187-10644433)
chr4 (80-211)||(111362-111493)
chr4 (242-324)||(122020-122102)
chr4 (9-54)||(10488627-10488672)
chr4 (9-54)||(16328079-16328124)
chr4 (80-305)||(47357622-47357849)
chr4 (83-158)||(7849970-7850044)
chr4 (242-324)||(13048271-13048353)
chr4 (130-224)||(41166083-41166177)
chr4 (80-224)||(15044794-15044938)
chr4 (69-101)||(44055870-44055902)
chr4 (109-224)||(8374504-8374619)
chr4 (80-224)||(15109486-15109630)
chr4 (109-230)||(17145796-17145917)
chr4 (160-224)||(13809647-13809711)
chr4 (113-224)||(52265645-52265757)
[»] chr3 (32 HSPs)
chr3 (1-322)||(16744167-16744489)
chr3 (86-324)||(17912532-17912771)
chr3 (69-324)||(15859074-15859331)
chr3 (80-324)||(14842611-14842856)
chr3 (80-324)||(15936677-15936922)
chr3 (80-322)||(15938521-15938764)
chr3 (80-320)||(2049777-2050019)
chr3 (69-324)||(51158068-51158325)
chr3 (209-324)||(2449288-2449404)
chr3 (80-324)||(12030197-12030443)
chr3 (70-324)||(13838852-13839107)
chr3 (87-324)||(15614808-15615047)
chr3 (24-154)||(15468555-15468686)
chr3 (24-154)||(22275119-22275250)
chr3 (87-222)||(47984624-47984759)
chr3 (87-222)||(48003198-48003333)
chr3 (87-222)||(47993911-47994046)
chr3 (87-222)||(48012484-48012619)
chr3 (9-54)||(2449391-2449436)
chr3 (72-324)||(16821099-16821353)
chr3 (80-132)||(19231945-19231997)
chr3 (80-142)||(41270043-41270104)
chr3 (80-142)||(55316187-55316248)
chr3 (80-142)||(13955124-13955185)
chr3 (242-324)||(13975771-13975853)
chr3 (80-142)||(13975956-13976017)
chr3 (80-142)||(45860773-45860834)
chr3 (242-324)||(45860937-45861019)
chr3 (69-101)||(22144532-22144564)
chr3 (112-230)||(12264932-12265050)
chr3 (242-324)||(13954939-13955021)
chr3 (242-324)||(55316351-55316433)
[»] chr7 (27 HSPs)
chr7 (1-324)||(7292905-7293229)
chr7 (80-324)||(11580789-11581035)
chr7 (68-324)||(13037064-13037322)
chr7 (87-324)||(47481081-47481320)
chr7 (80-324)||(36052634-36052877)
chr7 (83-324)||(16479000-16479244)
chr7 (80-324)||(18253885-18254130)
chr7 (209-324)||(11516324-11516440)
chr7 (209-324)||(15441614-15441730)
chr7 (209-324)||(30262179-30262295)
chr7 (80-324)||(16211733-16211979)
chr7 (87-324)||(13320988-13321229)
chr7 (80-324)||(3059933-3060179)
chr7 (1-54)||(15441717-15441770)
chr7 (1-54)||(30262282-30262335)
chr7 (80-324)||(13572644-13572890)
chr7 (80-324)||(2437425-2437671)
chr7 (80-157)||(10989378-10989454)
chr7 (1-54)||(11516284-11516337)
chr7 (83-215)||(296128-296257)
chr7 (98-324)||(13911062-13911292)
chr7 (69-101)||(15822691-15822723)
chr7 (242-305)||(25292407-25292470)
chr7 (246-324)||(296016-296094)
chr7 (242-324)||(10989541-10989623)
chr7 (80-142)||(25292572-25292633)
chr7 (69-224)||(17224075-17224230)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-324)||(37116-37440)
[»] scaffold0195 (2 HSPs)
scaffold0195 (80-324)||(19173-19419)
scaffold0195 (80-324)||(21257-21503)
[»] chr5 (29 HSPs)
chr5 (88-324)||(18531117-18531355)
chr5 (84-321)||(22053886-22054125)
chr5 (80-324)||(23506932-23507178)
chr5 (69-324)||(27182597-27182854)
chr5 (83-324)||(34939248-34939490)
chr5 (209-324)||(20623066-20623182)
chr5 (209-324)||(21233578-21233694)
chr5 (212-324)||(37052844-37052957)
chr5 (209-324)||(16536294-16536410)
chr5 (209-324)||(25900456-25900571)
chr5 (70-154)||(17471803-17471887)
chr5 (80-324)||(18778030-18778276)
chr5 (80-324)||(22366519-22366765)
chr5 (80-324)||(25426596-25426842)
chr5 (80-157)||(12342-12418)
chr5 (1-54)||(20623026-20623079)
chr5 (80-157)||(21073803-21073879)
chr5 (1-54)||(21233681-21233734)
chr5 (87-160)||(29190479-29190552)
chr5 (99-324)||(4200023-4200251)
chr5 (80-324)||(19499867-19500113)
chr5 (80-324)||(27009809-27010055)
chr5 (80-324)||(43443433-43443679)
chr5 (242-324)||(29188322-29188404)
chr5 (9-54)||(25900558-25900603)
chr5 (1-54)||(37052801-37052854)
chr5 (9-54)||(16536262-16536307)
chr5 (112-224)||(23493916-23494029)
chr5 (160-224)||(7728466-7728530)
[»] chr2 (25 HSPs)
chr2 (80-322)||(36982493-36982737)
chr2 (69-324)||(19794754-19795011)
chr2 (84-324)||(24341439-24341681)
chr2 (83-324)||(7507894-7508138)
chr2 (87-324)||(25265440-25265679)
chr2 (80-324)||(8891209-8891455)
chr2 (209-324)||(19689451-19689567)
chr2 (209-324)||(23820168-23820284)
chr2 (209-324)||(14906490-14906606)
chr2 (80-324)||(462706-462951)
chr2 (209-324)||(20015108-20015224)
chr2 (80-324)||(43643007-43643250)
chr2 (80-324)||(20627363-20627609)
chr2 (80-157)||(19886869-19886945)
chr2 (9-54)||(19689554-19689599)
chr2 (9-54)||(14906593-14906638)
chr2 (9-54)||(20015076-20015121)
chr2 (9-54)||(23820136-23820181)
chr2 (242-324)||(17396702-17396784)
chr2 (80-142)||(17396887-17396948)
chr2 (109-191)||(19669279-19669362)
chr2 (130-190)||(9636761-9636821)
chr2 (112-191)||(19666525-19666605)
chr2 (146-190)||(24884718-24884762)
chr2 (69-101)||(32465813-32465845)
[»] scaffold0025 (2 HSPs)
scaffold0025 (84-324)||(8820-9062)
scaffold0025 (80-324)||(148688-148934)
[»] scaffold0077 (1 HSPs)
scaffold0077 (80-324)||(36963-37209)
[»] chr6 (17 HSPs)
chr6 (69-324)||(23153403-23153660)
chr6 (87-324)||(14626168-14626407)
chr6 (80-324)||(35009489-35009735)
chr6 (83-324)||(1657798-1658040)
chr6 (83-324)||(15862443-15862684)
chr6 (87-324)||(1650143-1650382)
chr6 (83-216)||(27740808-27740941)
chr6 (80-324)||(25175531-25175777)
chr6 (80-324)||(27654021-27654267)
chr6 (69-223)||(18381821-18381975)
chr6 (80-133)||(16825986-16826038)
chr6 (94-200)||(22361926-22362032)
chr6 (69-98)||(32898745-32898774)
chr6 (69-224)||(21623123-21623278)
chr6 (160-224)||(25367374-25367438)
chr6 (112-191)||(33324690-33324770)
chr6 (112-191)||(35136182-35136262)
[»] scaffold0266 (2 HSPs)
scaffold0266 (80-324)||(1091-1337)
scaffold0266 (80-324)||(3632-3877)
[»] chr1 (21 HSPs)
chr1 (80-324)||(20445646-20445892)
chr1 (80-324)||(20531411-20531657)
chr1 (69-324)||(20893676-20893933)
chr1 (80-324)||(20931312-20931558)
chr1 (80-324)||(22227777-22228022)
chr1 (80-324)||(22232474-22232719)
chr1 (209-324)||(51452589-51452705)
chr1 (83-324)||(41394191-41394435)
chr1 (80-324)||(20913004-20913243)
chr1 (87-324)||(2116228-2116468)
chr1 (80-324)||(37844500-37844746)
chr1 (242-324)||(45051554-45051636)
chr1 (9-54)||(51452557-51452602)
chr1 (87-167)||(45051416-45051496)
chr1 (80-142)||(5072611-5072672)
chr1 (80-142)||(18601341-18601402)
chr1 (70-101)||(49967607-49967638)
chr1 (242-324)||(5072426-5072508)
chr1 (242-324)||(18601156-18601238)
chr1 (109-190)||(20254308-20254389)
chr1 (112-191)||(22143531-22143611)
[»] scaffold0049 (1 HSPs)
scaffold0049 (80-324)||(48155-48400)
[»] scaffold0026 (2 HSPs)
scaffold0026 (80-324)||(107715-107960)
scaffold0026 (80-305)||(64585-64812)
[»] scaffold0023 (2 HSPs)
scaffold0023 (80-324)||(48565-48811)
scaffold0023 (84-157)||(36065-36137)
[»] scaffold0011 (3 HSPs)
scaffold0011 (80-324)||(123214-123460)
scaffold0011 (69-101)||(255074-255106)
scaffold0011 (69-101)||(261680-261712)
[»] scaffold0622 (1 HSPs)
scaffold0622 (69-211)||(9338-9480)
[»] scaffold0175 (1 HSPs)
scaffold0175 (80-324)||(1006-1250)
[»] scaffold0125 (1 HSPs)
scaffold0125 (87-324)||(41622-41861)
[»] scaffold0022 (1 HSPs)
scaffold0022 (80-324)||(5254-5498)
[»] scaffold0215 (2 HSPs)
scaffold0215 (87-324)||(9387-9626)
scaffold0215 (87-324)||(16285-16524)
[»] scaffold0141 (4 HSPs)
scaffold0141 (209-324)||(22637-22753)
scaffold0141 (209-324)||(26892-27008)
scaffold0141 (9-54)||(22605-22650)
scaffold0141 (9-54)||(26860-26905)
[»] scaffold0124 (2 HSPs)
scaffold0124 (209-324)||(1632-1748)
scaffold0124 (9-54)||(1735-1780)
[»] scaffold0302 (1 HSPs)
scaffold0302 (80-324)||(12083-12326)
[»] scaffold0132 (1 HSPs)
scaffold0132 (87-324)||(13480-13719)
[»] scaffold0008 (3 HSPs)
scaffold0008 (80-324)||(128219-128464)
scaffold0008 (99-157)||(31884-31942)
scaffold0008 (73-101)||(22650-22678)
[»] scaffold0529 (1 HSPs)
scaffold0529 (87-322)||(2936-3174)
[»] scaffold0498 (1 HSPs)
scaffold0498 (80-324)||(8846-9091)
[»] scaffold0413 (1 HSPs)
scaffold0413 (80-324)||(6114-6358)
[»] scaffold0106 (1 HSPs)
scaffold0106 (69-324)||(41686-41942)
[»] scaffold0075 (1 HSPs)
scaffold0075 (83-324)||(34510-34755)
[»] scaffold0369 (1 HSPs)
scaffold0369 (80-324)||(3690-3936)
[»] scaffold0012 (1 HSPs)
scaffold0012 (80-324)||(247492-247738)
[»] scaffold0218 (1 HSPs)
scaffold0218 (80-320)||(5115-5356)
[»] scaffold1542 (1 HSPs)
scaffold1542 (82-324)||(584-828)
[»] scaffold0001 (3 HSPs)
scaffold0001 (70-321)||(171863-172115)
scaffold0001 (70-321)||(177566-177818)
scaffold0001 (69-101)||(70882-70914)
[»] scaffold0076 (1 HSPs)
scaffold0076 (80-324)||(42965-43211)
[»] scaffold0162 (2 HSPs)
scaffold0162 (87-324)||(8230-8466)
scaffold0162 (80-320)||(26469-26710)
[»] scaffold0009 (1 HSPs)
scaffold0009 (70-321)||(271983-272235)
[»] scaffold0139 (2 HSPs)
scaffold0139 (80-324)||(14099-14344)
scaffold0139 (80-318)||(21160-21399)
[»] scaffold0104 (1 HSPs)
scaffold0104 (80-202)||(48482-48603)
[»] scaffold1560 (1 HSPs)
scaffold1560 (80-202)||(26-147)
[»] scaffold0066 (1 HSPs)
scaffold0066 (112-324)||(54415-54630)
[»] scaffold0116 (1 HSPs)
scaffold0116 (80-324)||(3-249)
[»] scaffold0361 (1 HSPs)
scaffold0361 (88-167)||(3183-3262)
[»] scaffold0772 (1 HSPs)
scaffold0772 (242-324)||(5660-5742)
[»] scaffold0420 (1 HSPs)
scaffold0420 (242-324)||(13363-13445)
[»] scaffold1404 (1 HSPs)
scaffold1404 (80-133)||(1815-1867)
[»] scaffold0018 (1 HSPs)
scaffold0018 (242-324)||(51232-51314)
[»] scaffold0053 (1 HSPs)
scaffold0053 (69-224)||(76984-77139)
[»] scaffold0028 (1 HSPs)
scaffold0028 (242-324)||(89504-89586)
[»] scaffold0021 (1 HSPs)
scaffold0021 (69-106)||(132505-132542)
[»] scaffold0006 (1 HSPs)
scaffold0006 (89-224)||(197390-197525)
[»] scaffold0032 (1 HSPs)
scaffold0032 (112-190)||(104793-104872)
[»] scaffold1711 (1 HSPs)
scaffold1711 (242-324)||(1342-1424)
[»] scaffold0389 (1 HSPs)
scaffold0389 (94-191)||(10642-10739)
[»] scaffold0970 (1 HSPs)
scaffold0970 (130-191)||(2471-2532)
[»] scaffold0240 (1 HSPs)
scaffold0240 (69-98)||(7522-7551)
[»] scaffold0044 (1 HSPs)
scaffold0044 (69-98)||(38253-38282)
[»] scaffold0700 (1 HSPs)
scaffold0700 (137-201)||(2548-2612)
[»] scaffold0123 (1 HSPs)
scaffold0123 (112-191)||(8007-8087)
[»] scaffold0016 (1 HSPs)
scaffold0016 (68-187)||(116687-116806)


Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 22907588 - 22907264
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
22907588 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac 22907489  T
101 aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
22907488 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 22907389  T
201 catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 299  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| |||||||||||    
22907388 catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 22907289  T
300 catacacttattatcaattcatgca 324  Q
    |||||| ||||||||||||||||||    
22907288 catacaattattatcaattcatgca 22907264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 324
Target Start/End: Original strand, 17345540 - 17345782
Alignment:
83 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 182  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
17345540 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 17345639  T
183 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 280  Q
     ||||| || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
17345640 tatcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 17345738  T
281 atggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||  || | ||||||||||||||| |||| |||||||||||||    
17345739 atgtgatttcaccaacaatcatacaattatcatcaattcatgca 17345782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 5238184 - 5238300
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
5238284 tattatcaattcatgca 5238300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 24661414 - 24661298
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
24661314 tattatcaattcatgca 24661298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 43685643 - 43685759
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
43685743 tattatcaattcatgca 43685759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 24548956 - 24549195
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
24548956 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 24549055  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    |||||  ||||||||| | | ||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
24549056 aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 24549155  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
24549156 aatttcaccaacaatcatacaattatcatcaattcatgca 24549195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 43373761 - 43373518
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||   |||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
43373761 tttcaccaaaacaccaacaa---ttcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 43373665  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     | ||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
43373664 tagcatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 43373565  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||| | |||| |||||||||||||    
43373564 aacatgtaatttcaccaacaatcatataattatcatcaattcatgca 43373518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 6774535 - 6774296
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||| ||||||| |||| |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||    
6774535 aaaacaccaacaacaaatcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 6774436  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    |||||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||     
6774435 aattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt 6774336  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
6774335 aatttcaccaacaatcatacaattatcatcaattcatgca 6774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 16194005 - 16193766
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||  |||||||  |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||    
16194005 aaaacaccaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 16193906  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    ||||| |||||||||| | ||||| | ||| ||||  || | ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||     
16193905 aattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt 16193806  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| |  |||||||||||||| |||| |||||||||||||    
16193805 aatttccccaacaatcatacaattatcatcaattcatgca 16193766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 16405268 - 16405025
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||| ||||||| || |||||||| |  |||||||||||||| |||||| |||| || |||    
16405268 tttcatcaaaacaccaacaacatctcaaattatcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaa 16405169  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| ||||||||||||  |||||| |   ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | |||||     
16405168 taacatcaattgaacaagaatcatatgtcaattta---acaacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg 16405072  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
16405071 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 16405025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 21844856 - 21844610
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
21844856 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21844758  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||| ||||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
21844757 taacatcatttgaacaaaaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21844658  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| ||| | ||||||||||||||| | || |||||||||||||    
21844657 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgca 21844610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 21852249 - 21852003
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
21852249 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21852151  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
21852150 taacatcatttgaacaagaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21852051  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||  ||| | ||||||||||||||| | || |||||||||||||    
21852050 aaacatttaatttcaccaacaatcatacaatcatcatcaattcatgca 21852003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 324
Target Start/End: Complemental strand, 24929096 - 24928841
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  || ||| || |||  |||||||||| |||||||| | ||||||||||||  |||||||| |    
24929096 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaa 24928998  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt-gcacaattttcataacttctcatttc 267  Q
    ||| || | | ||| ||||||| ||||||  |||| |||||| |||| ||||| |  | ||||||| | |||  |||||||||||| ||||| ||||||     
24928997 ttaacaaccataacctcaattgaacaagagacataactcaatccaaccacaacttagcgaaattcaccaattgagcacaattttcacaacttatcatttg 24928898  T
268 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
24928897 ttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 24928841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5238144 - 5238197
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
5238144 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 5238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24661454 - 24661401
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
24661454 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 24661401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43685603 - 43685656
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
43685603 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 43685656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 222975 - 222754
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
222975 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 222877  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
222876 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 222777  T
277 aaacatggaatctaaccaacaat 299  Q
     |||||| ||| | |||||||||    
222776 gaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 736598 - 736377
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
736598 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 736500  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
736499 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 736400  T
277 aaacatggaatctaaccaacaat 299  Q
     |||||| ||| | |||||||||    
736399 gaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 860493 - 860272
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
860493 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 860395  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
860394 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 860295  T
277 aaacatggaatctaaccaacaat 299  Q
     |||||| ||| | |||||||||    
860294 gaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 30120690 - 30120917
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
30120690 tttcaccaaaacaccaaca-caattcaaattatcatcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 30120788  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt 276  Q
     ||||||||||| ||| |||||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
30120789 taacatcaattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 30120888  T
277 aaacatggaatctaaccaacaatcataca 305  Q
     |||||| ||| | |||||||||||||||    
30120889 gaacatgtaatttcaccaacaatcataca 30120917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 23837154 - 23837308
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatct 168  Q
    ||||||| |||||||| ||| ||||| |||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| |||||||| ||||||||     
23837154 aattcaccaatttcacaaaaccaccaccaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 23837252  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
     |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
23837253 cttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 13662561 - 13662481
Alignment:
72 ttcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattca 153  Q
    ||||| |||||||| ||| |||||||||||||| |  || ||||||||||||||| | ||||||||||||||  ||||||||    
13662561 ttcaccaatttcacaaaaccaccaacaacaatttag-ttctcatcatcaatccataattatgtatacccaaatcatgattca 13662481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 16674672 - 16674624
Alignment:
84 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg 133  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
16674672 accaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatg 16674624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 41246613 - 41246650
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattca 106  Q
    ||||||||||||||||||||||||||||||||| ||||    
41246613 caattcacaaatttcaccaaaacaccaacaacatttca 41246650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 26680089 - 26680413
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
26680089 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcgattcccaaatttcaccaaaacaccaacaac 26680188  T
101 aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
26680189 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 26680288  T
201 catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 299  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||||    
26680289 catagctcaattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 26680388  T
300 catacacttattatcaattcatgca 324  Q
    |||||| ||||||||||||||||||    
26680389 catacaattattatcaattcatgca 26680413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 15675381 - 15675139
Alignment:
84 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| |||    
15675381 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataac 15675282  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 281  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
15675281 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 15675182  T
282 tggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    || ||| | ||||||||||||||| |||| |||||||||||||    
15675181 tgtaatttcaccaacaatcatacaattatcatcaattcatgca 15675139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 31115603 - 31115842
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||    
31115603 aaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatc 31115702  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    ||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  ||||||     
31115703 aattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgt 31115802  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
31115803 aatttcaccaacaatcatacaattatcatcaattcatgca 31115842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 69 - 324
Target Start/End: Original strand, 13246386 - 13246643
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
13246386 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 13246485  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 266  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
13246486 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 13246585  T
267 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     | | ||||| |||||| ||| | ||||||||||||||| |||| || ||||||||||    
13246586 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgca 13246643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 54118551 - 54118294
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
54118551 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 54118452  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 266  Q
    |||| || | | ||||||||||| |||||||||||| || |||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||| ||    
54118451 attaacaactataacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaatt 54118352  T
267 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
54118351 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 54118294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 10488659 - 10488775
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
10488759 tattatcaattcatgca 10488775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 16328092 - 16327976
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
16327992 tattatcaattcatgca 16327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 10104523 - 10104300
Alignment:
84 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||                   |||||||    
10104523 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaa-------------------caacaac 10104443  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 281  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
10104442 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 10104343  T
282 tggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    || ||| | ||||||||||||||| |||| |||||||||||||    
10104342 tgtaatttcaccaacaatcatacaattatcatcaattcatgca 10104300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 10644187 - 10644433
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
10644187 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10644285  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||||||| ||| |||||| | ||||| ||||| |||||  | |  ||||||| | |||| |||||||  |||||||||  ||||| |||||||||    
10644286 taacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatattt 10644385  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | || |||||||||||| |||| |||||||||||||    
10644386 gaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 10644433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 111362 - 111493
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |    
111362 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 111461  T
180 caacatcaattgcacaagaatcatagctcaat 211  Q
     ||||||||||| |||||||||||| ||||||    
111462 taacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 122020 - 122102
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||    
122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 122102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 10488627 - 10488672
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
10488627 caatcataacatataatcataccctccatcataattcaacaacaac 10488672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 16328124 - 16328079
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
16328124 caatcataacatataatcataccctccatcataattcaacaacaac 16328079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 47357622 - 47357849
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||  ||||||| |||||||||||||||||||||  |||||||| | || |||||||||  | || ||| | || |||  |    
47357622 tttcaccaaaacaccaaca-cagctcaaattctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattca 47357720  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
47357721 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 47357820  T
277 aaacatggaatctaaccaacaatcataca 305  Q
     |||||| ||| | ||||||||| |||||    
47357821 gaacatgtaatttcaccaacaattataca 47357849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 7849970 - 7850044
Alignment:
83 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaac 158  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||| |||   |||||||||||||    
7849970 caccaaaacaccaaca-caattcaaattttcatcaccaattcatgattatgtatactcaagtcatgattcatcaac 7850044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 13048353 - 13048271
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||    
13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgca 13048271  T

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Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
130 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    |||| |||||||| | ||||||||||||| ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
41166177 tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 15044794 - 15044938
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatca 178  Q
    |||||||||| || ||||||||||| |  || ||||||||||  ||||| | ||| | |||||| | |||| |||||| | ||||||||  |||||| ||    
15044794 tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 15044892  T
179 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
15044893 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 44055870 - 44055902
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
44055870 caattcacaaatttcaccaaaacaccaacaaca 44055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 8374504 - 8374619
Alignment:
109 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 208  Q
    ||||||||||||||| || | ||||||||||||| | || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||    
8374504 ttttcatcatcaatcgataattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 8374603  T
209 aattcaactacaacat 224  Q
    | |||||| |||||||    
8374604 atttcaacaacaacat 8374619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 15109630 - 15109486
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatca 178  Q
    |||||||||| || ||||||||||| |  || ||||||||||  ||||| | ||| | |||||| | |||| |||||| | |||||||   |||||| ||    
15109630 tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaaca 15109532  T
179 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
15109531 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15109486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 17145917 - 17145796
Alignment:
109 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 208  Q
    |||||||||||||||| | | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||    
17145917 ttttcatcatcaatccgtaattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 17145818  T
209 aattcaactacaacatgtcaaa 230  Q
    | |||||| ||||||| |||||    
17145817 atttcaacaacaacatatcaaa 17145796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
160 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
13809711 acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 52265757 - 52265645
Alignment:
113 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 211  Q
    |||||||||  ||||||| ||| | |||||| | |||| ||||||||  ||| |||  |||||| ||||||||||||||| ||| ||||| || | ||||    
52265757 catcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 52265658  T
212 tcaactacaacat 224  Q
    ||||| |||||||    
52265657 tcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 16744489 - 16744167
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
16744489 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac 16744390  T
101 aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    |||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
16744389 aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaat 16744290  T
201 catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 299  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||    
16744289 catagctcaattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaat 16744190  T
300 catacacttattatcaattcatg 322  Q
    |||||||||||||||||||||||    
16744189 catacacttattatcaattcatg 16744167  T

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Target: chr3; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 86 - 324
Target Start/End: Complemental strand, 17912771 - 17912532
Alignment:
86 caaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacat 185  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||    
17912771 caaaacacccacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacat 17912672  T
186 caattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    | |||| ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||     
17912671 cgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgt 17912572  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
17912571 aatttcaccaacaatcatacaattatcatcaattcatgca 17912532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 15859331 - 15859074
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    |||||||| | ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
15859331 caattcaccattttcaccaaaacaacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 15859232  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 266  Q
    |||| || | | ||||||||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
15859231 attaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 15859132  T
267 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     | ||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
15859131 gttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 15859074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 14842856 - 14842611
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| |    
14842856 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatcca 14842758  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||||||||| |||||| |||| ||||     
14842757 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttg 14842658  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| ||||  ||||||||||||    
14842657 aacatgcaatttcaccaacaatcatacaattatcttcaattcatgca 14842611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 15936922 - 15936677
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| |    
15936922 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15936824  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
15936823 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15936724  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
15936723 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 15936677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 322
Target Start/End: Complemental strand, 15938764 - 15938521
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| |    
15938764 tttcaccaaaacaccaaca-caattcaaattttcagcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15938666  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
15938665 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15938566  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatg 322  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||    
15938565 aacatgtaatttcaccaacaatcatacaattatcatcaattcatg 15938521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 320
Target Start/End: Original strand, 2049777 - 2050019
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |    
2049777 tttcaccaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 2049876  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     | ||||||||| |||| ||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| || || |||| | |||||||||     
2049877 tagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttg 2049976  T
278 aacatggaatctaaccaacaatcatacacttattatcaattca 320  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||    
2049977 aacatgtaatttcaccaacaatcttacaattatcatcaattca 2050019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 51158325 - 51158068
Alignment:
69 caattcacaaatttcaccaaaacacc-aacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||||||||| | ||||||||  |||||||  |||||||  |||| ||||| |||||||||| |||||||| | ||||||||||||| ||||||||    
51158325 caattcacaaattt-agcaaaacacttaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 51158227  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt 265  Q
     |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
51158226 aattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 51158127  T
266 tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    | ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
51158126 tttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 51158068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 2449404 - 2449288
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
2449304 tattatcaattcatgca 2449288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 12030443 - 12030197
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| || | |    
12030443 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaacca 12030344  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     | ||||||||| |||||||||| |  |||| | ||| | ||| | |  ||||||| | |||  |||||| ||||| ||||| ||| || |||||||||     
12030343 tagcatcaattgaacaagaatcaaatatcaaattaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttg 12030244  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||||||    
12030243 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 12030197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 324
Target Start/End: Original strand, 13838852 - 13839107
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  || ||| || |||  |||||||||| |||||||||| ||||||||||||| |||||||| |    
13838852 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaaacaatgattcatcaaccacaacatcaa 13838950  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttc 267  Q
    ||| || | | ||||||||||| |||||||||||| |||||| |||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||     
13838951 ttaacagccataacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttg 13839050  T
268 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||||||    
13839051 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgca 13839107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 15614808 - 15615047
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
15614808 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 15614907  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    |||||  ||||||||| | | ||| | ||| | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| ||||||     
15614908 aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgt 15615007  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | |||||||||| |||| |||| |||||||||||||    
15615008 aatttcaccaacaatcctacaattatcatcaattcatgca 15615047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 15468686 - 15468555
Alignment:
24 atcatacactccatcataattcaacaacaacttatcatatttcttcaatt-cacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaat 122  Q
    |||||||| ||||||||  |||||||||||| | ||||| |||  ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||    
15468686 atcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaatttcaccaaaacaacaacaacaattcaaattctcatcatcaat 15468587  T
123 ccatgaatatgtatacccaaacgatgattcat 154  Q
     |||||||||| |||||||| | |||||||||    
15468586 tcatgaatatgcatacccaagcaatgattcat 15468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 22275119 - 22275250
Alignment:
24 atcatacactccatcataattcaacaacaacttatcatatttcttcaatt-cacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaat 122  Q
    ||||| || ||||||||  |||||||||||| | ||||| |||   |||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
22275119 atcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaat 22275218  T
123 ccatgaatatgtatacccaaacgatgattcat 154  Q
     |||||||||| ||||| || | |||||||||    
22275219 tcatgaatatgcatacctaagcaatgattcat 22275250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 47984624 - 47984759
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||    
47984624 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 47984723  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
47984724 aattgaacatgaatcacatctcaatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 48003198 - 48003333
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||    
48003198 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 48003297  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
48003298 aattgaacatgaatcacatctcaatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 47993911 - 47994046
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||    
47993911 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 47994010  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
47994011 aattgaacatgaatcacatctcaatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 48012484 - 48012619
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||    
48012484 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 48012583  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
48012584 aattgaacatgaatcacatctcaatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 2449436 - 2449391
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
2449436 caatcataacatataatcataccctccatcataattcaacaacaac 2449391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 324
Target Start/End: Original strand, 16821099 - 16821353
Alignment:
72 ttcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctatt 171  Q
    ||||| |||||||| ||| |||||||||| ||| |  || ||||||| |||||||||||||| | |||||| | || |||||||||  | || ||| | |    
16821099 ttcaccaatttcacaaaaccaccaacaaccatttat-ttatcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaat 16821197  T
172 agcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttct 268  Q
    | |||  | ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| |    
16821198 aacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacattttt 16821297  T
269 acatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||||| |||||| ||| | ||||||||||||||| |||| ||||||| |||||    
16821298 acatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgca 16821353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 19231945 - 19231997
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatat 132  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
19231945 tttcaccaaaacaccaacaacaatccaaattatcatcatcaattcatgaatat 19231997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 41270043 - 41270104
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| | ||||||    
41270043 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaa 41270104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 55316187 - 55316248
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| | ||||||    
55316187 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaa 55316248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 13955185 - 13955124
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | ||||||    
13955185 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaa 13955124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 13975853 - 13975771
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||    
13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgca 13975771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 13976017 - 13975956
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | ||||||    
13976017 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaa 13975956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 45860773 - 45860834
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | ||||||    
45860773 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaa 45860834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 45860937 - 45861019
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||    
45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgca 45861019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 22144564 - 22144532
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
22144564 caattcacaaatttcaccaaaacaccaacaaca 22144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 12265050 - 12264932
Alignment:
112 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 211  Q
    ||||||||||||||| | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| |    
12265050 tcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt 12264951  T
212 tcaactacaacatgtcaaa 230  Q
    ||||| ||||||| |||||    
12264950 tcaacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 13955021 - 13954939
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||    
13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgca 13954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 55316351 - 55316433
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  |||||||||||||    
55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgca 55316433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 7292905 - 7293229
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac 100  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
7292905 atcaaccacaatcacaacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac 7293004  T
101 aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
7293005 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 7293104  T
201 catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 299  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| |||||||||||    
7293105 catagctcaattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 7293204  T
300 catacacttattatcaattcatgca 324  Q
    |||||| ||||||| ||||||||||    
7293205 catacaattattattaattcatgca 7293229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 11581035 - 11580789
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || | |    
11581035 tttcaccaaaacaccaacaacaattcaaattctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagcca 11580936  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
11580935 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 11580836  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
11580835 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 11580789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 68 - 324
Target Start/End: Complemental strand, 13037322 - 13037064
Alignment:
68 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| ||||||||    
13037322 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 13037223  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt 265  Q
     ||||  ||  | ||||| ||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
13037222 aattaatattcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 13037123  T
266 tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    | | | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||    
13037122 tgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgca 13037064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 47481320 - 47481081
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| ||||  | | | ||||||    
47481320 aaaacaccaacaacaattcaaattatcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatc 47481221  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg 283  Q
    ||||| |||||||||||| ||||||||||| ||||| | |  ||||||| ||| |||  ||||||||||| ||||| |||||| ||||||||| ||||||    
47481220 aattgaacaagaatcataactcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatg 47481122  T
284 gaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     ||| | || |||||||||||| |||| |||||||||||||    
47481121 taatttcactaacaatcatacaattatcatcaattcatgca 47481081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 36052634 - 36052877
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
36052634 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 36052733  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
    |||||||||||| |||||||||| | ||||| | |   ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
36052734 caacatcaattgaacaagaatcaaatctcaaatta---acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36052830  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||| | |||| |||||||||||||    
36052831 aacatgtaattttaccaacaatcatataattatcatcaattcatgca 36052877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 83 - 324
Target Start/End: Complemental strand, 16479244 - 16479000
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |    
16479244 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 16479145  T
182 acatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa 279  Q
    ||||||||||  ||||||||| | ||||| | ||  | ||| |  | ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
16479144 acatcaattgagcaagaatcaaatctcaaattaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 16479045  T
280 catggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||| ||| | ||||||||||||||| |||| |||||||||||||    
16479044 catgtaatttcaccaacaatcatacaattatcatcaattcatgca 16479000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 18254130 - 18253885
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| |    
18254130 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 18254032  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
18254031 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 18253932  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
18253931 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 18253885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 11516324 - 11516440
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
11516424 tattatcaattcatgca 11516440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 15441730 - 15441614
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
15441630 tattatcaattcatgca 15441614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 30262295 - 30262179
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
30262195 tattatcaattcatgca 30262179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 16211733 - 16211979
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| || |||| ||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | |    
16211733 tttcaccaaaacaccaacaacaattcaaattctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaacca 16211832  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||  |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
16211833 taacatcaatttaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 16211932  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | || ||||||| |||| |||| |||||||||||||    
16211933 aacatgcaatttcacaaacaatcttacaattatcatcaattcatgca 16211979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 13320988 - 13321229
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||| || | ||||||   ||||||||||||| |||||||| |||| || ||| ||||||    
13320988 aaaacaccaacaacaatccaaattctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatc 13321087  T
187 aattgcacaagaatcatagctcaattcaacta-caacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaaca 281  Q
    ||||| ||| |||||||| ||||||||||| | |||| | |  ||||||| | |||  |||||| |||||||||||  ||||| ||||||  || |||||    
13321088 aattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattcaccaattgagcacaa-tttcataacttgacatttatacatactttgaaaca 13321186  T
282 tggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    || ||| | ||||||||||||||| |||| |||||||||||||    
13321187 tgtaatttcaccaacaatcatacaattatcatcaattcatgca 13321229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 3059933 - 3060179
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| ||||||||| ||||||  ||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   |    
3059933 tttcatcaaaacacccacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 3060032  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt--gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  | ||||||| ||||||  ||| |||||||| || || |||||| |||||||||    
3060033 taacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatattt 3060131  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||| |  |||| |||| ||||||| |||||    
3060132 gaacatgtaatttcaccaacagtattacaattatcatcaattaatgca 3060179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15441770 - 15441717
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
15441770 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 15441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30262335 - 30262282
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
30262335 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 30262282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 13572644 - 13572890
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
13572644 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 13572742  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
13572743 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 13572842  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| ||| | ||||||||||| ||| | || |||||||||||||    
13572843 aaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgca 13572890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 2437425 - 2437671
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || ||| | || |||||||||  | || ||| | || |||  |    
2437425 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattca 2437523  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatt 275  Q
     ||||||| ||| |||||||||| | ||||  | ||| |||||  | |  ||||||| ||| |||  |||||| |||||||||| |||||| | |||||     
2437524 taacatcatttgaacaagaatcaaatctcatattaacaacaacttaggaaaaattca-ccaattgaacacaatcttcataacttatcatttttgcatata 2437622  T
276 taaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    | |||||| ||| | |||||||||||||||  ||  |||||||||||||    
2437623 tgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgca 2437671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 10989378 - 10989454
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa 157  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || |||||||||    
10989378 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaa 10989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11516284 - 11516337
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
11516284 atcaaccacaatcataacatatactcatacactccatcataattcaacaacaac 11516337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 215
Target Start/End: Complemental strand, 296257 - 296128
Alignment:
83 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 182  Q
    ||||||||||||||||  ||||||| |||||| |||||||||||||||| | |||||||| |  | ||||||||   |||||||| ||||  | ||||||    
296257 caccaaaacaccaacacaaattcaatttttcaacatcaatccatgaataagcatacccaatcagtaattcatca---acaacatcaattaatagcaacaa 296161  T
183 catcaattgcacaagaatcatagctcaattcaa 215  Q
    ||||||||| ||| |||||| | | ||||||||    
296160 catcaattgaacatgaatcacaacacaattcaa 296128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 324
Target Start/End: Complemental strand, 13911292 - 13911062
Alignment:
98 aacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaag 197  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||   || |||||||||  | || ||| | || |||  | ||||||||||| ||| |    
13911292 aacaattcaaattctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatg 13911193  T
198 aatcatagctcaattcaactacaac---atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaacc 293  Q
    ||||| | ||||| ||||| |||||   | |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||    
13911192 aatcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcacc 13911093  T
294 aacaatcatacacttattatcaattcatgca 324  Q
    |||||||||||| |||  |||||||||||||    
13911092 aacaatcatacaattaacatcaattcatgca 13911062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 15822723 - 15822691
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
15822723 caattcacaaatttcaccaaaacaccaacaaca 15822691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 25292470 - 25292407
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 305  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | |||||||||||||||    
25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcataca 25292407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 296094 - 296016
Alignment:
246 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| |||||||||    
296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgca 296016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 10989541 - 10989623
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  |||||||||||||    
10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgca 10989623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 25292633 - 25292572
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| ||||||| |||| | ||||||||||||||| | ||||||    
25292633 tttcaccaaaacaccaaca-caactcaaattctcattaacaatccatgaatatgcaaacccaa 25292572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 17224230 - 17224075
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||| ||||| || ||| |||||||||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| ||||||   ||||||||    
17224230 caattcaccaattttacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatc 17224132  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
      |||||| ||||||||||||||| ||| || || ||   ||||||||| |||||||    
17224131 acttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacat 17224075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 37440 - 37116
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac 100  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
37440 atcaaccacaatcacaacatataatcatacactccatcataattcaacaaaaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac 37341  T
101 aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
37340 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 37241  T
201 catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 299  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||||| ||| |||||||||||    
37240 catagctcaatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 37141  T
300 catacacttattatcaattcatgca 324  Q
    |||||| ||||||||||||||||||    
37140 catacaattattatcaattcatgca 37116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 19173 - 19419
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || |||    
19173 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 19272  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
19273 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 19372  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||||||    
19373 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 19419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 21257 - 21503
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || |||    
21257 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 21356  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
21357 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 21456  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||||||    
21457 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 21503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 88 - 324
Target Start/End: Complemental strand, 18531355 - 18531117
Alignment:
88 aaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatca 187  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||| |||||||| |||| || ||| |||||||    
18531355 aaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatca 18531256  T
188 attgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    |||| ||| |||||||| ||||||||||| ||||| | |  ||||||| ||| |||  ||||||||||| |||||| ||||| |||||| || ||||||     
18531255 attgaacatgaatcatatctcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgt 18531157  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
18531156 aatttcaccaacaatcatacaattatcatcaattcatgca 18531117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 84 - 321
Target Start/End: Complemental strand, 22054125 - 22053886
Alignment:
84 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| |||| || ||| |||    
22054125 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataac 22054026  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 281  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
22054025 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 22053926  T
282 tggaatctaaccaacaatcatacacttattatcaattcat 321  Q
    || ||| | |||||||||||||||  ||| ||||||||||    
22053925 tgtaatttcaccaacaatcatacaactatcatcaattcat 22053886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 23506932 - 23507178
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
23506932 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 23507031  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
23507032 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 23507131  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
23507132 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 23507178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 27182854 - 27182597
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||| | ||||||||||||| ||||||||     
27182854 caattcaaaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatca 27182755  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 266  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
27182754 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 27182655  T
267 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     | | ||||| |||||| ||| | | ||||||||||||| |||| |||| ||||||||    
27182654 gttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgca 27182597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 324
Target Start/End: Original strand, 34939248 - 34939490
Alignment:
83 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 182  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
34939248 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataa 34939347  T
183 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 280  Q
    |||||| || |||||||||||| |||||||| || |  || | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
34939348 catcaactgaacaagaatcataactcaattc-acaatgacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 34939446  T
281 atggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||  || | ||||||||||||||| |||| |||||||||||||    
34939447 atgtgatttcaccaacaatcatacaattatcatcaattcatgca 34939490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 20623066 - 20623182
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
20623166 tattatcaattcatgca 20623182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 21233694 - 21233578
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
21233594 tattatcaattcatgca 21233578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 37052844 - 37052957
Alignment:
212 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 310  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
311 tatcaattcatgca 324  Q
    ||||||||||||||    
37052944 tatcaattcatgca 37052957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 16536294 - 16536410
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
308 tattatcaattcatgca 324  Q
    |||||| ||||||||||    
16536394 tattataaattcatgca 16536410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 25900571 - 25900456
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
308 tattatcaattcatgca 324  Q
    ||| |||||||||||||    
25900472 tatcatcaattcatgca 25900456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 17471887 - 17471803
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcat 154  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||| | |||||||||    
17471887 aattcaccaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcgtacccaagcaatgattcat 17471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 18778276 - 18778030
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | ||  ||  |    
18778276 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattca 18778178  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
18778177 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 18778078  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||    
18778077 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 18778030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 22366765 - 22366519
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
22366765 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 22366667  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
22366666 taacatcatttgaacaagcatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 22366567  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||    
22366566 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 22366519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 25426596 - 25426842
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
25426596 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25426694  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | | || ||||||| |||||||||| |||||| | ||||| |    
25426695 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 25426794  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||    
25426795 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 25426842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 12342 - 12418
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa 157  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||    
12342 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaa 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20623026 - 20623079
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
20623026 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 20623079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 21073879 - 21073803
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa 157  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||    
21073879 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaa 21073803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21233734 - 21233681
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
21233734 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 21233681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 29190552 - 29190479
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaacta 160  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||    
29190552 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaacta 29190479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 324
Target Start/End: Complemental strand, 4200251 - 4200023
Alignment:
99 acaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaaga 198  Q
    |||||||||||| |||||||||| ||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| ||    
4200251 acaattcaaattctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatga 4200152  T
199 atcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaa 295  Q
    |||| | ||||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||||    
4200151 atcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaa 4200052  T
296 caatcatacacttattatcaattcatgca 324  Q
    ||||||||||  ||  |||||||||||||    
4200051 caatcatacaactaacatcaattcatgca 4200023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 19499867 - 19500113
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| || | || ||| |||||  | || ||| | || |||  |    
19499867 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattca 19499965  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | | || ||||||| |||||||||| |||||| | ||||| |    
19499966 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 19500065  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||    
19500066 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 19500113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 27009809 - 27010055
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
27009809 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 27009907  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  | ||||| |||||||||| |||||| |||||||||    
27009908 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatattt 27010007  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| ||| | ||||||| ||||||| | || |||||||||||||    
27010008 aaacatgtaatttcaccaacactcatacaatcatcatcaattcatgca 27010055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 43443679 - 43443433
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
43443679 tttcaccaaaacaccaaca-caattcaaatcctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43443581  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||| ||| | ||||| ||||| |||||  |    ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
43443580 taacatcatttgaacaagactcacatctcaaatcaacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 43443481  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | |||||||||||||||  ||  |||||||||||||    
43443480 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgca 43443433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 29188404 - 29188322
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 29188322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 25900603 - 25900558
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
25900603 caatcataacatataatcataccctccatcataattcaacaacaac 25900558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37052801 - 37052854
Alignment:
1 atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
37052801 atcaaccacaatcataacatataatcataccctccatcataactcaacaacaac 37052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 16536262 - 16536307
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||    
16536262 caatcataacatacaatcataccctccatcataattcaacaacaac 16536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 23493916 - 23494029
Alignment:
112 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 210  Q
    ||||||||||  ||||||| ||| | |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | |||    
23493916 tcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 23494015  T
211 ttcaactacaacat 224  Q
    |||||| |||||||    
23494016 ttcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
160 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 80 - 322
Target Start/End: Complemental strand, 36982737 - 36982493
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    |||||| ||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||| || |||    
36982737 tttcactaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaa 36982638  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| || | ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
36982637 taacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36982538  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatg 322  Q
    |||||| ||| | |||| ||||| |||| |||| |||||||||||    
36982537 aacatgtaatttcaccagcaatcttacaattatcatcaattcatg 36982493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 19795011 - 19794754
Alignment:
69 caattcacaaatttcaccaaaa-caccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||    
19795011 caattcacaa-tttcaccaaaaacaccaacaaaaattcaaattctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatc 19794913  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt 265  Q
     |||| |   || ||||||||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
19794912 aattaacggaaataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 19794813  T
266 tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    | | | ||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||    
19794812 tgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgca 19794754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 24341681 - 24341439
Alignment:
84 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 183  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||   |||||| |||| || ||| |||    
24341681 accaaaacaccaacaataattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataac 24341582  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 281  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
24341581 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 24341482  T
282 tggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |  ||| | ||||||||||||||| |||| |||||||||||||    
24341481 tataatttcaccaacaatcatacaattatcatcaattcatgca 24341439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 324
Target Start/End: Complemental strand, 7508138 - 7507894
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |    
7508138 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 7508039  T
182 acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatattta 277  Q
    |||||||||   ||| |||||||| ||||||| ||| ||||| | | |||||||| ||| |||  ||||||||||||||||| | |||| |||||||||     
7508038 acatcaattaaaacatgaatcatatctcaatt-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttg 7507941  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
7507940 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 25265679 - 25265440
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||    
25265679 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 25265580  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||     
25265579 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgt 25265480  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
25265479 aatttcaccaacaatcatacaattatcatcaattcatgca 25265440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 8891209 - 8891455
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | |    
8891209 tttcaccaaaacaccaacaaccattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 8891308  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
8891309 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 8891408  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| |  |||||||||||||| |||| |||||||||||||    
8891409 aacatgtaatttcgccaacaatcatacaattatcatcaattcatgca 8891455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 19689567 - 19689451
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
19689467 tattatcaattcatgca 19689451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 23820168 - 23820284
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
23820268 tattatcaattcatgca 23820284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 14906606 - 14906490
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
14906506 tattatcaattcatgca 14906490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 462706 - 462951
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| |||||||| | ||| ||||| |||||||||| |||||||| | ||||||||||||  || ||||| |||| || | |    
462706 tttcatcaaaacaccaacaaca-ttcaaattcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagcca 462804  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatattt 276  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| ||| |||  ||||||||||| ||||| |||||| |||||||||    
462805 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatattt 462903  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | |||||||||| |||| |||| |||||||||||||    
462904 gaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 462951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 20015108 - 20015224
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
20015208 tattatcaattcatgca 20015224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 43643250 - 43643007
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| ||||||||||||| |   ||||||| ||||||||||| |||||||||| |||||||| |  ||||||||||||||||||||| |||| || |||    
43643250 tttcatcaaaacaccaacatc---tcaaattatcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaa 43643154  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     | ||||||||| |||||||||||| ||||| | ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | |||||     
43643153 tagcatcaattgaacaagaatcatatctcaaattaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg 43643054  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
43643053 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 43643007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 20627609 - 20627363
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||||||  |||||||| | ||||||||||||| |||||| | |||| || | |    
20627609 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaacca 20627510  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     || |||||||| |||||||| | | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| || || |||||| |||||||||     
20627509 taaaatcaattgaacaagaattaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttg 20627410  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     ||||| ||| | ||||||||||||||| |||| |||||||| ||||    
20627409 gacatgtaatttcaccaacaatcatacaattatcatcaattcgtgca 20627363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 19886945 - 19886869
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa 157  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||    
19886945 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaa 19886869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 19689599 - 19689554
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
19689599 caatcataacatataatcatacactccatcataattcaacaacaac 19689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 14906638 - 14906593
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
14906638 caatcataacatataatcataccctccatcataattcaacaacaac 14906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 20015076 - 20015121
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
20015076 caatcataacatataatcataccctccatcataattcaacaacaac 20015121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 23820136 - 23820181
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
23820136 caatcataacatataatcataccctccatcataattcaacaacaac 23820181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 17396784 - 17396702
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||    
17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgca 17396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 17396948 - 17396887
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | ||||||    
17396948 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaa 17396887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 19669362 - 19669279
Alignment:
109 ttttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    |||||||||||| | ||||||| ||| |||||||| | |||| |||||||| | ||||||  |||||| |||||||||||||||    
19669362 ttttcatcatcagttcatgaattatgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 9636761 - 9636821
Alignment:
130 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 190  Q
    |||| |||||||||| |||| |||||||| |||| |||| ||| || ||||||||||||||    
9636761 tatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt 9636821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 19666525 - 19666605
Alignment:
112 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    ||||||||||  ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||    
19666525 tcatcatcaaaacatgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaacaacatcaattg 19666605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
146 atgattcatcaactacaacatctattagcatcaacaacatcaatt 190  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||    
24884718 atgaatcatcaacaacaatatctattagcaacaacaacatcaatt 24884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 32465813 - 32465845
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||| |||||||||||||||||||||||||    
32465813 caattcataaatttcaccaaaacaccaacaaca 32465845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 84 - 324
Target Start/End: Original strand, 8820 - 9062
Alignment:
84 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 183  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| ||||  | ||| |||    
8820 accaaaacaccaacaaaaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataac 8919  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 281  Q
    |||||||| |||  ||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
8920 atcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 9019  T
282 tggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    || ||| | ||||||||||||||| |||| |||||||||||||    
9020 tgtaatttcaccaacaatcatacaattatcatcaattcatgca 9062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 148688 - 148934
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||| | ||||||||||||| ||||| || |||| || | |    
148688 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaacca 148787  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
148788 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 148887  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||||||    
148888 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 148934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 37209 - 36963
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |    
37209 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagcca 37110  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 277  Q
     ||| ||||||| |||||| ||||| |||||| |||| ||||| | |  ||||||| | |||| |||||||||||| ||||| |||||| |||||||||     
37109 taacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttg 37010  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||| | |||| |||| |||||||||||||    
37009 aacatgtaatttcaccaacaagcttacaattatcatcaattcatgca 36963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 69 - 324
Target Start/End: Original strand, 23153403 - 23153660
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||   ||||||||||||| ||||||||     
23153403 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatca 23153502  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 266  Q
    |||| || | | || |||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
23153503 attaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 23153602  T
267 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
23153603 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 23153660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 14626407 - 14626168
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
14626407 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 14626308  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtca-aattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg 283  Q
    |||||  ||||||||| | ||||| | ||| ||||| |  || |||||| ||| |||  ||||||||||||||||| |||||| ||||||||| ||||||    
14626307 aattgagcaagaatcaaatctcaagttaacaacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatg 14626209  T
284 gaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     ||| | ||||||||||||||| |||| |||||||||||||    
14626208 taatttcaccaacaatcatacaattatcatcaattcatgca 14626168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 35009735 - 35009489
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || |||    
35009735 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaa 35009636  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
    |||||||||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| ||     
35009635 caacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattg 35009536  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
35009535 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 35009489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 324
Target Start/End: Complemental strand, 1658040 - 1657798
Alignment:
83 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 182  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
1658040 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 1657941  T
183 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 280  Q
    |||||| || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
1657940 catcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 1657842  T
281 atggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||  || | ||||||||||||||| |||| |||||||||||||    
1657841 atgtgatttcaccaacaatcatacaattatcatcaattcatgca 1657798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 324
Target Start/End: Original strand, 15862443 - 15862684
Alignment:
83 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 182  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
15862443 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataa 15862542  T
183 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 280  Q
    ||| || || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
15862543 cat-aaatgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaac 15862640  T
281 atggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||  || | ||||||||||||||| |||| |||||||||||||    
15862641 atgtgatttcaccaacaatcatacaattatcatcaattcatgca 15862684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 1650382 - 1650143
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||    
1650382 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 1650283  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    |||||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||  ||||||||| ||||||     
1650282 aattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgt 1650183  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
1650182 aatttcaccaacaatcatacaattatcatcaattcatgca 1650143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 27740808 - 27740941
Alignment:
83 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 182  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| || ||||||||   ||  | |||| |    
27740808 caccaaaacaccaacaccaattcaaattttcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaacca 27740907  T
183 catcaattgcacaagaatcatagctcaattcaac 216  Q
    ||||||||| ||| |||||||| |||||||||||    
27740908 catcaattgaacatgaatcatatctcaattcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 25175531 - 25175777
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
25175531 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25175629  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
25175630 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 25175729  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||    
25175730 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 25175777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 27654267 - 27654021
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
27654267 tttcaccaaaacaccgaca-caattcaaattctcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 27654169  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| | | |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
27654168 taacatcattggaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 27654069  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||    
27654068 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 27654021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 18381975 - 18381821
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||| |||||||| ||| |||||||||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| |||||||| ||||||||    
18381975 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatc 18381877  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 223  Q
      |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
18381876 acttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 16826038 - 16825986
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg 133  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
16826038 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatg 16825986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 22362032 - 22361926
Alignment:
94 caacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgc 192  Q
    ||||||||| |||| || ||||||||||| ||||||| ||| | |||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||     
22362032 caacaacaactcaa-ttctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattga 22361934  T
193 acaagaat 200  Q
    ||| ||||    
22361933 acatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 32898745 - 32898774
Alignment:
69 caattcacaaatttcaccaaaacaccaaca 98  Q
    ||||||||||||||||||||||||||||||    
32898745 caattcacaaatttcaccaaaacaccaaca 32898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 21623123 - 21623278
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||| ||||| ||||||  ||||||||||| |||  ||||||||  |||  ||||||| ||| |||||||| | |||| |||| |||  |||||||    
21623123 caattcaccaattttaccaaactaccaacaacaactcat-ttttcatccacaaatcatgaattatgaatacccaagccatgactcattaacatcaacatc 21623221  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
      |||||| ||||||||||||| | ||| || || || | ||||||||| |||||||    
21623222 acttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaacaacat 21623278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
160 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 33324690 - 33324770
Alignment:
112 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||  ||||||  ||||||||||||||    
33324690 tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg 33324770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 35136262 - 35136182
Alignment:
112 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||  ||||||  ||||||||||||||    
35136262 tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg 35136182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 1091 - 1337
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||||| | || |||||||||| |||| ||| |||| || | |    
1091 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaacca 1190  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
1191 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 1290  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| ||||||||||||||||||    
1291 aacatgtaatttcaccaacaatcatacaattattatcaattcatgca 1337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 3877 - 3632
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||| | || |||||||||||| |||||| |||||||| | || |||| ||||  |||||||| |||| |||| |    
3877 tttcaccaaaacaccaaca-caattcaaactctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatcca 3779  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |   ||| ||  |||||||||||| ||||| |||||| |||||||||     
3778 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttg 3679  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
3678 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 20445646 - 20445892
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | |    
20445646 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20445745  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     |||||||||||  ||||||||||| | ||||||||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || ||     
20445746 taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg 20445845  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 20445892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 20531411 - 20531657
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | |    
20531411 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20531510  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     |||||||||||  ||||||||||| | ||||||||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || ||     
20531511 taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg 20531610  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 20531657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 20893933 - 20893676
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||||| ||||||||||||| ||||||||     
20893933 caattcacaaatttcttcaaaacaccaacaacaattcaaattctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatca 20893834  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 266  Q
    |||| ||   | ||||||||||| ||||||||||||  |||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
20893833 attaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 20893734  T
267 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     | | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||    
20893733 gttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgca 20893676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 20931312 - 20931558
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||   || |||||||||| |||||||| |||| || | |    
20931312 tttcaccaaaacaccaacaacaattcaaattctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaacca 20931411  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||  | |  ||||||| | |||| |||||||||||||||||| |||||| ||||||| |     
20931412 taacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatg 20931511  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||||||    
20931512 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 20931558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 22227777 - 22228022
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  |    
22227777 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22227875  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | ||| | ||||||||||||||||| |||||| |||||||||     
22227876 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22227975  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | || |||||||||||| |||| |||||||||||||    
22227976 aacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 22232474 - 22232719
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  |    
22232474 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22232572  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | ||| | ||||||||||||||||| |||||| |||||||||     
22232573 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22232672  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | || |||||||||||| |||| |||||||||||||    
22232673 aacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 51452589 - 51452705
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
51452689 tattatcaattcatgca 51452705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 83 - 324
Target Start/End: Original strand, 41394191 - 41394435
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |    
41394191 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaata 41394290  T
182 acatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa 279  Q
    ||||||||||  ||||||||| | |||||   ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
41394291 acatcaattgagcaagaatcaaatctcaacataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 41394390  T
280 catggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||| ||  | ||||||||||||||| |||| ||||||| |||||    
41394391 catgtaacttcaccaacaatcatacaattatcatcaatttatgca 41394435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 20913004 - 20913243
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||| ||| |||| || | |    
20913004 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaacca 20913103  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| ||||||||||      |||| ||| |||||  ||  ||||||| | |||  |||||||||||||||||| |||||| ||||||| |     
20913104 taacatcaattgaacaagaatca------aatt-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatg 20913196  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||||||    
20913197 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 20913243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 2116228 - 2116468
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
2116228 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 2116327  T
187 aattgcacaagaatc-atagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatg 283  Q
    |||||  |||||||| | |  |||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||    
2116328 aattgagcaagaatcaaaatatcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatg 2116427  T
284 gaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     ||| | ||||||||||||||| |||| |||||||||||||    
2116428 taatttcaccaacaatcatacaattatcatcaattcatgca 2116468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 37844746 - 37844500
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | |    
37844746 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaacca 37844648  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttca-taacttctcatttctacatattt 276  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||||  |||  |||||||||||| ||  || |||||| | | || ||    
37844647 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctactt 37844548  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||||||||| |||| |||||||||||||    
37844547 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 37844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 45051554 - 45051636
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 45051636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 51452557 - 51452602
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
51452557 caatcataacatataatcatacactccatcataattcaacaacaac 51452602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 45051416 - 45051496
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| |  |||||||||||| | ||||||    
45051416 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaataacatc 45051496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 5072672 - 5072611
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||||||||||| | ||||||    
5072672 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaa 5072611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 18601402 - 18601341
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 142  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||||||||||| | ||||||    
18601402 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaa 18601341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 49967607 - 49967638
Alignment:
70 aattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||||||||||||||||||||||||||||    
49967607 aattcacaaatttcaccaaaacaccaacaaca 49967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 5072508 - 5072426
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  |||||||||||||    
5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgca 5072426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 18601238 - 18601156
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  |||||||||||||    
18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgca 18601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 20254308 - 20254389
Alignment:
109 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 190  Q
    |||||||||||||||||| | |||||||||||||   || ||||| | || ||||||| | | |||| ||||||||||||||    
20254308 ttttcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatgtctcagcaacaacaacatcaatt 20254389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 22143611 - 22143531
Alignment:
112 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    ||||||||||  ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||    
22143611 tcatcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattg 22143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 48155 - 48400
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||  | || |||||||||  |||||||| |||| |||| |    
48155 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatcta 48253  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
48254 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 48353  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
48354 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 48400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 107715 - 107960
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  |||||||| |||| |||| |    
107715 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatcca 107813  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||| | ||||| |||||| | || ||||     
107814 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttg 107913  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
107914 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 107960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 64812 - 64585
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
64812 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 64714  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
64713 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 64614  T
277 aaacatggaatctaaccaacaatcataca 305  Q
    ||||||| ||| | |||||||||||||||    
64613 aaacatgtaatttcaccaacaatcataca 64585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 48565 - 48811
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | |    
48565 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 48664  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatcca-tttgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||||| ||||||  | | ||||| | |  ||||||| | | |  |||||||||||| ||||| |||||| | | |||||     
48665 taacatcaattgaacaagaatcataactcaatctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttg 48764  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
48765 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 48811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 36065 - 36137
Alignment:
84 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa 157  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || |||||||||    
36065 accataacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaa 36137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 123460 - 123214
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
123460 tttcaccaaaacaccaacaacaattcaaattctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaacca 123361  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||||| || |||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
123360 taacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 123261  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
123260 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 123214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 255106 - 255074
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||||||||||||| |||||||||||||||    
255106 caattcacaaatttcacgaaaacaccaacaaca 255074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 261712 - 261680
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||||||||||||| |||||||||||||||    
261712 caattcacaaatttcacgaaaacaccaacaaca 261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 9338 - 9480
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
9338 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 9437  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaat 211  Q
    |||| || | | ||||||||||| |||||||||||| ||||||    
9438 attaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 1250 - 1006
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | || |||||||||  | |||||  |||| |||| |    
1250 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatcca 1152  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||| ||| |||||||| | | ||||||| ||| ||||| | |  ||||||||| |||  |||||||||||| ||||| | |||| |||||||||     
1151 taacatcacttgaacaagaataaaatctcaatt-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttg 1053  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
1052 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 41622 - 41861
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||  ||| || ||||||||||    
41622 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatc 41721  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg 283  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| ||| |||  ||||||||||| |||||| ||||| |||||| || ||||||    
41722 aattgaacatggttctcatcataattcaacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatg 41820  T
284 gaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     ||| | ||||||||||||||| |||| |||||||||||||    
41821 taatttcaccaacaatcatacaattatcatcaattcatgca 41861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 5498 - 5254
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||| ||  |||||||| |||| |||  |    
5498 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattca 5401  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatttg--cacaattttcataacttctcatttctacatattt 276  Q
     ||||||||||| |||||||||| | ||||| | ||| |||||   |  ||||||| ||| |||  ||||||||||||||||| |||||| |||||||||    
5400 taacatcaattgaacaagaatcaaatctcaaattaacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatattt 5302  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||||||||| |||| |||||||||||||    
5301 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 9626 - 9387
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
9626 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 9527  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
9526 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 9427  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
9426 aatttcaccaacaatcatacaattatcatcaattcatgca 9387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 16524 - 16285
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
16524 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 16425  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
16424 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 16325  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
16324 aatttcaccaacaatcatacaattatcatcaattcatgca 16285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 22637 - 22753
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
22737 tattatcaattcatgca 22753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 26892 - 27008
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
26992 tattatcaattcatgca 27008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 22605 - 22650
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
22605 caatcataacatataatcataccctccatcataattcaacaacaac 22650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 26860 - 26905
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
26860 caatcataacatataatcataccctccatcataattcaacaacaac 26905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 1748 - 1632
Alignment:
209 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 307  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
308 tattatcaattcatgca 324  Q
    |||||||||||||||||    
1648 tattatcaattcatgca 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 1780 - 1735
Alignment:
9 caatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
1780 caatcataacatataatcataccctccatcataattcaacaacaac 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 12083 - 12326
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||| ||  | |||||| |||| |||  |    
12083 tttcactaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattca 12181  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | |||||||  || ||||| |  | ||||||| | |||| |||||||||||| ||||| |||||| |||| |||||    
12182 taacatcaattgaacaagaatcaaatctcaatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacattta 12279  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| | | | ||||||||||||||| |||| |||||||||||||    
12280 aacatgtattttcaccaacaatcatacaattatcatcaattcatgca 12326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 13480 - 13719
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||| |||| |||||||||| ||||| ||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||||||||||    
13480 aaaacacctacaaaaattcaaattctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatc 13579  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||||| |||  |||||||||||| |||||| ||||| |||||| || ||||||     
13580 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgt 13679  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| |||||||||||||    
13680 aatttcaccaacaatcatacaattatcatcaattcatgca 13719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 128464 - 128219
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| |    
128464 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatcca 128365  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||||| ||| ||||| |  |||| |   ||| ||  |||||||||||| |||||  ||  | |||| ||||     
128364 taacatcaattgaacaagaatcaaatctcaatt-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttg 128266  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| |||||||||||||    
128265 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 128219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 31942 - 31884
Alignment:
99 acaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa 157  Q
    |||||||||||| ||||||| |||||||||||||| | |||||| | || |||||||||    
31942 acaattcaaattctcatcattaatccatgaatatgcaaacccaagcaattattcatcaa 31884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 101
Target Start/End: Original strand, 22650 - 22678
Alignment:
73 tcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||    
22650 tcacaaatttcaccaaaacaccaacaaca 22678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 322
Target Start/End: Original strand, 2936 - 3174
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||| ||| |  |||||||||||| |||||||| | || || ||| ||||||    
2936 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 3035  T
187 aatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatg 283  Q
    ||||   ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||    
3036 aattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatg 3135  T
284 gaatctaaccaacaatcatacacttattatcaattcatg 322  Q
     ||| | ||||||||||||||| |||| |||||||||||    
3136 taatttcaccaacaatcatacaattatcatcaattcatg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 8846 - 9091
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| |    
8846 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatcca 8944  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| |||||  ||||| |||||| ||     
8945 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattg 9044  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||||||||| |||| |||| ||| |||||||||    
9045 aacatgtaatttcaccaacaatcttacaattatcatcgattcatgca 9091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 6358 - 6114
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | || |||||||||  | ||||   |||| |||| |    
6358 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatcca 6260  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||| ||| |||||||||| | ||||||| ||| ||||| | |  ||||||| | |||  |||||||||| | ||||| | |||| |||||||||     
6259 taacatcacttgaacaagaatcaaatctcaatt-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttg 6161  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
6160 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 6114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 69 - 324
Target Start/End: Original strand, 41686 - 41942
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 168  Q
    |||||||||| ||||||||||||||||||||||||||||||| | || |||||| |||||||||| |||||||| | ||||||||||| |||||||| |     
41686 caattcacaa-tttcaccaaaacaccaacaacaattcaaattctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaaca 41784  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 266  Q
    |||| || | | | ||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| || || ||||||    
41785 attaacagccatagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcattt 41884  T
267 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     ||||||||| | |||| ||| | |||||||||   ||| |||| |||||||||||||    
41885 ttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgca 41942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 83 - 324
Target Start/End: Complemental strand, 34755 - 34510
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    |||||||||||| |||||||| | || || ||| |    
34755 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaata 34656  T
182 acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaa 278  Q
    |||||||||   ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  | |||||||||| ||||||  |||| |||| | || |    
34655 acatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattga 34556  T
279 acatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||| ||| | ||||||||||||||| |||| |||||||||||||    
34555 acatgtaatttcaccaacaatcatacaattatcatcaattcatgca 34510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 3690 - 3936
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||||   || |||||||||  | |||||| |||| |||  |    
3690 tttcaccaaaacatcaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattca 3788  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctca-tttctacatattt 276  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | ||| | |||||||| |||||||| ||| ||| |||||||||    
3789 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatattt 3888  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||||||||| |||| |||||||||||||    
3889 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 247738 - 247492
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| | |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   |    
247738 tttcaccaaaacaccaacaaccattcaaattctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 247639  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |   ||| ||  |||||||||||| ||||| |||||| | | |||||     
247638 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttg 247539  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | |||  |||||||||| |||| |||||||||||||    
247538 aacatgaaatttcaccctcaatcatacaattatcatcaattcatgca 247492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 320
Target Start/End: Complemental strand, 5356 - 5115
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | |    
5356 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 5258  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||||| |||| |  ||| |||||  ||  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
5257 taacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 5158  T
278 aacatggaatctaaccaacaatcatacacttattatcaattca 320  Q
    |||||| | | | |||||||||| |||| |||| |||||||||    
5157 aacatgtactttcaccaacaatcttacaattatcatcaattca 5115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 324
Target Start/End: Complemental strand, 828 - 584
Alignment:
82 tcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 181  Q
    ||||||||||||||||||| ||||||||| ||||| ||||| | |||||||| |||||||| | ||||||||||||| |||||||| ||||||| | | |    
828 tcaccaaaacaccaacaaccattcaaattctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccata 729  T
182 acatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa 279  Q
    |||||||||  |||||||||||| || |||  |||   ||| | |  ||||||| | |||  | |||||||||| ||||  |||||| | | ||||| ||    
728 acatcaattaaacaagaatcataacttaatctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaa 629  T
280 catggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||| ||| | ||||||||||||||| |||| |||||||||||||    
628 catgtaatttcaccaacaatcatacaattatcatcaattcatgca 584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 70 - 321
Target Start/End: Original strand, 171863 - 172115
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  | || | || |||  |||||||||| ||||| || | ||||||||||||| |||||||| |    
171863 aattcaccaatttcacaaaaccaccaacaacaatccatttcttaa-caacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 171961  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc 267  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
171962 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 172061  T
268 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 321  Q
    | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
172062 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 70 - 321
Target Start/End: Original strand, 177566 - 177818
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  | || | || |||  |||||||||| ||||| || | ||||||||||||| |||||||| |    
177566 aattcaccaatttcacaaaaccaccaacaacaatccatttcttaa-caacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 177664  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc 267  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
177665 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 177764  T
268 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 321  Q
    | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
177765 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 70914 - 70882
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
70914 caattcacaaatttcaccaaaacaccaacaaca 70882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 42965 - 43211
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
42965 tttcaccaaaacaccaaca-caatttaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43063  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| ||| |||||| | ||||| | ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| |||||||||    
43064 taacatcacttgaacacgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatattt 43163  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
     |||||| ||| | ||||||||||||||| |||| |||||||||||||    
43164 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 43211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 8466 - 8230
Alignment:
87 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 186  Q
    ||||||||| |||||||||||||| ||||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||    
8466 aaaacaccagcaacaattcaaattctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 8367  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 284  Q
    ||||| ||| |  ||  | |  ||||||   ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||| ||     
8366 aattgaacatggttctcatcataattca---acaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgt 8270  T
285 aatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||| | ||||||||||||||| |||| | |||||||||||    
8269 aatttcaccaacaatcatacaattatcaccaattcatgca 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 320
Target Start/End: Complemental strand, 26710 - 26469
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| | |||||| ||||| ||||| ||| |||||| |||||||| | ||||||||||||  |||||||| |||| || | |    
26710 tttcatcaaaacaccaacaacact-caaattctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 26612  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||||| |||| |  ||| ||||| | |  ||||||| | |||  | |||||||||| ||||| |||||| |||||||||     
26611 taacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttg 26512  T
278 aacatggaatctaaccaacaatcatacacttattatcaattca 320  Q
    |||||| | | | ||||| |||| |||| |||| |||||||||    
26511 aacatgtactttcaccaataatcttacaattatcatcaattca 26469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 321
Target Start/End: Original strand, 271983 - 272235
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  | |  || | |||| |||||||||| |||||||| | ||||||||||||| |||||||| |    
271983 aattcactaatttcacaaaaccaccaacaacaatccatttctctataa-caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 272081  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc 267  Q
    ||| || | | |||| |||||| |||||||||||| |||||| |||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
272082 ttaacagctataacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 272181  T
268 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 321  Q
    | | ||||| |||||| ||| |  ||| |||||||||| |||| ||||||||||    
272182 ttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcat 272235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 14344 - 14099
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || ||| | || |||||||||  | |||||| |  | |||  |    
14344 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattca 14246  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||| ||||| |||||||||  | ||||| | | | ||||| | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||     
14245 taacattaattgaacaagaatccaatctcaaattatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttc 14146  T
278 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||| ||| | || |||||||||| | |||| |||||||||||||    
14145 aacatgtaatttcactaacaatcatataattatcatcaattcatgca 14099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 318
Target Start/End: Complemental strand, 21399 - 21160
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| || |||||||||||||||| |||||||||||||| | || ||| | || |||||||||  | |||||| | || |||  |    
21399 tttcaccaaaacaccaaca-cagttcaaattttcatcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattca 21301  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 277  Q
     ||||||||||| |||||||||  | ||||| | ||| ||||| | |  ||||||| | |||  || |||| |||||||||| |||||| |||||||||     
21300 taacatcaattgaacaagaatccaatctcaaattaacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttg 21201  T
278 aacatggaatctaaccaacaatcatacacttattatcaatt 318  Q
    |||||| ||| | || |||||||||| | |||| |||||||    
21200 aacatgtaatttcactaacaatcatataattatcatcaatt 21160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 48482 - 48603
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| |    
48482 tttcatcaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatcca 48580  T
180 caacatcaattgcacaagaatca 202  Q
     |||||||| || ||||||||||    
48581 taacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 147 - 26
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  |    
147 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 49  T
180 caacatcaattgcacaagaatca 202  Q
     || |||| ||| ||||||||||    
48 taatatcatttgaacaagaatca 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 324
Target Start/End: Original strand, 54415 - 54630
Alignment:
112 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 211  Q
    ||||||||||||||| |||||||||||||||   |||||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| |    
54415 tcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt 54514  T
212 tcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatacact 307  Q
    ||||| ||||||| || ||||||| | |||  | |||| |||||||||||  ||||| ||||||  || ||||||| ||| | ||| ||||||||||| |    
54515 tcaacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaat 54613  T
308 tattatcaattcatgca 324  Q
    ||| |||||||||||||    
54614 tatcatcaattcatgca 54630  T

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Target: scaffold0116 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 3 - 249
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||| |||| |||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
3 tttcaccaaaacaccaaca-caactcaaattctcatcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 101  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 276  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| | |||||||| |||||| |||||||||    
102 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacatattt 201  T
277 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| ||| | ||||||||||||||| | || |||||||||||||    
202 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgca 249  T

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Target: scaffold0361 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 3183 - 3262
Alignment:
88 aaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||  ||||||||| ||||||||||||  ||||||||    
3183 aaacaccaacaacaattccaattctcttcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatc 3262  T

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Target: scaffold0772 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 5660 - 5742
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||||||||||||    
5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgca 5742  T

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Target: scaffold0420 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 13445 - 13363
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 13363  T

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Target: scaffold1404 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 1815 - 1867
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg 133  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
1815 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatg 1867  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 51314 - 51232
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||    
51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 51232  T

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Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 77139 - 76984
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 167  Q
    |||||||| |||||||| ||| |||||||||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| |||||||  |||| |||    
77139 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatc 77041  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
      |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
77040 acttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacat 76984  T

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Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 89586 - 89504
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 89504  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 132542 - 132505
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattca 106  Q
    ||||||||||||||||||||||||||||||||| ||||    
132542 caattcacaaatttcaccaaaacaccaacaacatttca 132505  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 197525 - 197390
Alignment:
89 aacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatca 187  Q
    |||| ||||||||| |||| || ||||||||||  ||||| | ||| | |||||||| |||| |||||||| |||| |||  |||||| |||||||||||    
197525 aacaacaacaacaactcaa-ttctcatcatcaaagcatgatttatgaagacccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatca 197427  T
188 attgcacaagaatcatagctcaattcaactacaacat 224  Q
    |||| ||| |||||  | | ||||||||| |||||||    
197426 attgaacatgaatctcatcacaattcaacaacaacat 197390  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 104872 - 104793
Alignment:
112 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 190  Q
    ||||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||    
104872 tcatcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

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Target: scaffold1711 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 1424 - 1342
Alignment:
242 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 324  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  |||||||||||||    
1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgca 1342  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 10642 - 10739
Alignment:
94 caacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    |||||||||||||  |||||||||||||| ||||||| ||| | |||||| | |||| | |||||| ||||||||  ||||||  ||||||||||||||    
10642 caacaacaattcat-ttttcatcatcaattcatgaattatgaacacccaagccatgaatgatcaacaacaacatcacttagcaaaaacaacatcaattg 10739  T

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Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 2471 - 2532
Alignment:
130 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| |||||||||||||||    
2471 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 7522 - 7551
Alignment:
69 caattcacaaatttcaccaaaacaccaaca 98  Q
    ||||||||||||||||||||||||||||||    
7522 caattcacaaatttcaccaaaacaccaaca 7551  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 38253 - 38282
Alignment:
69 caattcacaaatttcaccaaaacaccaaca 98  Q
    ||||||||||||||||||||||||||||||    
38253 caattcacaaatttcaccaaaacaccaaca 38282  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 2548 - 2612
Alignment:
137 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc 201  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||    
2548 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc 2612  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 8007 - 8087
Alignment:
112 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 191  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||   ||||| |||||||||||||||    
8007 tcatcaccaattcatgaattatgaatacccaagctatgaatcatcaacaacaacatcacatagcaacaacaacatcaattg 8087  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 116806 - 116687
Alignment:
68 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaa-tatgtatacccaaacgatgattcatcaactacaacat 166  Q
    ||||||||| ||||| || ||| |||||||||||| || | ||||||||| |||  |||||| |||| | |||||| | |||| |||||||| |||| ||    
116806 tcaattcaccaattttacaaaaccaccaacaacaa-tccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatat 116708  T
167 ctattagcatcaacaacatca 187  Q
    |  |||||| |||||||||||    
116707 cacttagcaacaacaacatca 116687  T

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