View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13443_high_6 (Length: 396)

Name: NF13443_high_6
Description: NF13443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13443_high_6
NF13443_high_6
[»] chr6 (26 HSPs)
chr6 (1-368)||(22735686-22736055)
chr6 (159-253)||(4844153-4844247)
chr6 (185-269)||(9031760-9031844)
chr6 (162-258)||(22730695-22730792)
chr6 (162-258)||(30833022-30833118)
chr6 (162-233)||(7233995-7234066)
chr6 (179-258)||(20858394-20858473)
chr6 (218-258)||(8176001-8176041)
chr6 (218-258)||(34524880-34524920)
chr6 (179-269)||(5134445-5134536)
chr6 (218-269)||(17176143-17176194)
chr6 (140-202)||(16110964-16111026)
chr6 (221-258)||(8309169-8309206)
chr6 (162-258)||(20149973-20150070)
chr6 (162-258)||(22182762-22182859)
chr6 (140-258)||(22389724-22389840)
chr6 (162-258)||(26669653-26669749)
chr6 (179-258)||(32394030-32394109)
chr6 (220-258)||(1488093-1488131)
chr6 (185-258)||(2945600-2945674)
chr6 (224-269)||(6219348-6219393)
chr6 (165-258)||(30668181-30668274)
chr6 (218-254)||(8253640-8253676)
chr6 (162-258)||(9051285-9051381)
chr6 (218-258)||(10455747-10455787)
chr6 (218-269)||(24470441-24470493)
[»] chr8 (25 HSPs)
chr8 (140-258)||(216119-216237)
chr8 (140-258)||(692679-692797)
chr8 (140-258)||(696888-697006)
chr8 (140-258)||(729742-729860)
chr8 (140-258)||(853637-853755)
chr8 (159-258)||(220353-220452)
chr8 (159-258)||(689508-689607)
chr8 (159-258)||(733976-734075)
chr8 (159-258)||(857872-857971)
chr8 (133-258)||(12560037-12560161)
chr8 (185-258)||(39432345-39432418)
chr8 (162-250)||(22847256-22847344)
chr8 (162-257)||(11900572-11900666)
chr8 (218-258)||(14011088-14011128)
chr8 (218-258)||(26657861-26657901)
chr8 (219-275)||(41793024-41793079)
chr8 (218-257)||(16621550-16621589)
chr8 (162-207)||(25408690-25408735)
chr8 (160-257)||(36593200-36593297)
chr8 (162-203)||(39208863-39208904)
chr8 (218-259)||(43554453-43554494)
chr8 (218-258)||(4955033-4955073)
chr8 (218-258)||(7345433-7345473)
chr8 (218-258)||(29937215-29937255)
chr8 (159-239)||(42711184-42711264)
[»] chr4 (29 HSPs)
chr4 (162-258)||(49039439-49039535)
chr4 (162-258)||(41492493-41492588)
chr4 (162-258)||(54264933-54265029)
chr4 (159-258)||(21023343-21023441)
chr4 (159-258)||(49743367-49743466)
chr4 (159-229)||(47416502-47416572)
chr4 (165-258)||(35230292-35230385)
chr4 (218-258)||(20610744-20610784)
chr4 (162-258)||(54854173-54854269)
chr4 (162-269)||(12585553-12585660)
chr4 (218-256)||(20166323-20166361)
chr4 (218-258)||(12820455-12820496)
chr4 (140-269)||(34370917-34371046)
chr4 (218-258)||(1589207-1589247)
chr4 (218-258)||(4419736-4419776)
chr4 (218-254)||(38657549-38657585)
chr4 (179-258)||(48512203-48512283)
chr4 (162-253)||(6202613-6202704)
chr4 (163-258)||(36045835-36045930)
chr4 (162-253)||(37997840-37997931)
chr4 (218-253)||(42432018-42432053)
chr4 (185-258)||(9084763-9084837)
chr4 (162-258)||(24039893-24039985)
chr4 (218-259)||(31480274-31480316)
chr4 (216-258)||(43049981-43050023)
chr4 (165-258)||(49319398-49319492)
chr4 (221-258)||(56913-56950)
chr4 (218-258)||(36008279-36008320)
chr4 (218-258)||(27921901-27921941)
[»] chr1 (47 HSPs)
chr1 (162-258)||(9768803-9768899)
chr1 (159-258)||(9769571-9769670)
chr1 (162-258)||(43020616-43020712)
chr1 (134-257)||(50575907-50576030)
chr1 (159-257)||(13941325-13941423)
chr1 (185-258)||(5684127-5684199)
chr1 (162-258)||(3341730-3341826)
chr1 (162-258)||(11238022-11238118)
chr1 (136-256)||(41677067-41677187)
chr1 (140-258)||(1721145-1721263)
chr1 (140-258)||(2643787-2643905)
chr1 (220-258)||(47645848-47645886)
chr1 (159-256)||(195051-195148)
chr1 (220-269)||(42801873-42801922)
chr1 (162-259)||(48565141-48565238)
chr1 (218-258)||(18003821-18003861)
chr1 (159-270)||(4511516-4511627)
chr1 (159-258)||(16182814-16182913)
chr1 (159-258)||(18646693-18646790)
chr1 (160-258)||(9410320-9410417)
chr1 (218-256)||(42908778-42908816)
chr1 (161-258)||(4605836-4605932)
chr1 (218-259)||(12489969-12490010)
chr1 (218-259)||(18976007-18976048)
chr1 (218-258)||(4146339-4146379)
chr1 (223-259)||(5862132-5862168)
chr1 (163-207)||(8890082-8890126)
chr1 (218-258)||(18179333-18179373)
chr1 (218-258)||(52961132-52961172)
chr1 (162-253)||(2903021-2903112)
chr1 (216-258)||(47939246-47939289)
chr1 (185-258)||(9527430-9527504)
chr1 (185-258)||(13870098-13870172)
chr1 (220-258)||(28417330-28417368)
chr1 (220-258)||(51917554-51917592)
chr1 (216-257)||(9074002-9074043)
chr1 (217-258)||(37262154-37262195)
chr1 (161-201)||(1576114-1576154)
chr1 (218-258)||(7015737-7015777)
chr1 (218-258)||(7906376-7906416)
chr1 (218-258)||(9004351-9004391)
chr1 (179-258)||(18923896-18923975)
chr1 (218-258)||(23758303-23758343)
chr1 (226-258)||(28284008-28284040)
chr1 (218-258)||(33176153-33176193)
chr1 (162-234)||(41182803-41182874)
chr1 (218-258)||(47141856-47141896)
[»] chr3 (32 HSPs)
chr3 (162-258)||(40160740-40160836)
chr3 (158-257)||(4045624-4045723)
chr3 (159-258)||(28951871-28951970)
chr3 (218-258)||(16874240-16874280)
chr3 (166-258)||(24130564-24130656)
chr3 (159-258)||(3993698-3993797)
chr3 (159-258)||(4010009-4010108)
chr3 (168-258)||(3973307-3973397)
chr3 (168-258)||(3996479-3996569)
chr3 (140-198)||(6054197-6054255)
chr3 (221-259)||(12143460-12143498)
chr3 (219-257)||(51017796-51017834)
chr3 (218-258)||(19137624-19137664)
chr3 (218-258)||(24160578-24160618)
chr3 (222-258)||(30745785-30745821)
chr3 (161-212)||(17262270-17262321)
chr3 (165-252)||(19149435-19149522)
chr3 (159-258)||(23025902-23026001)
chr3 (223-258)||(33533208-33533243)
chr3 (162-253)||(34407084-34407175)
chr3 (219-258)||(51412041-51412080)
chr3 (218-256)||(12236606-12236644)
chr3 (162-252)||(16985031-16985121)
chr3 (140-258)||(31680737-31680854)
chr3 (179-258)||(6951802-6951880)
chr3 (224-253)||(46969008-46969037)
chr3 (218-258)||(23237367-23237407)
chr3 (162-246)||(27119293-27119377)
chr3 (179-247)||(40996882-40996950)
chr3 (179-258)||(41767779-41767859)
chr3 (218-257)||(43774190-43774230)
chr3 (218-258)||(43911619-43911659)
[»] chr2 (26 HSPs)
chr2 (159-258)||(18065259-18065358)
chr2 (159-258)||(36386105-36386203)
chr2 (161-258)||(2057486-2057581)
chr2 (162-258)||(1244574-1244670)
chr2 (159-259)||(29896152-29896252)
chr2 (162-248)||(16310016-16310101)
chr2 (220-257)||(44132615-44132652)
chr2 (162-258)||(18089734-18089830)
chr2 (162-258)||(22355088-22355184)
chr2 (162-258)||(34107279-34107375)
chr2 (218-258)||(36277752-36277792)
chr2 (218-249)||(10602019-10602050)
chr2 (220-259)||(19352870-19352909)
chr2 (177-256)||(32288383-32288462)
chr2 (219-266)||(32944059-32944106)
chr2 (205-252)||(34376553-34376600)
chr2 (216-258)||(6496444-6496486)
chr2 (162-252)||(29713083-29713173)
chr2 (218-259)||(13294434-13294475)
chr2 (160-201)||(28679879-28679920)
chr2 (218-266)||(32527127-32527176)
chr2 (140-192)||(2394945-2394997)
chr2 (218-258)||(5772865-5772905)
chr2 (179-258)||(11133080-11133160)
chr2 (218-254)||(14307744-14307780)
chr2 (133-253)||(39118403-39118523)
[»] scaffold0011 (1 HSPs)
scaffold0011 (161-250)||(19388-19477)
[»] chr5 (23 HSPs)
chr5 (165-258)||(38040271-38040363)
chr5 (162-258)||(7147013-7147109)
chr5 (216-257)||(42781642-42781683)
chr5 (218-258)||(11246544-11246584)
chr5 (218-274)||(25660901-25660957)
chr5 (162-258)||(31556823-31556919)
chr5 (218-258)||(36742017-36742057)
chr5 (160-258)||(42553133-42553230)
chr5 (218-258)||(6806690-6806731)
chr5 (159-260)||(28768600-28768701)
chr5 (177-257)||(31907657-31907737)
chr5 (218-258)||(35813292-35813332)
chr5 (179-257)||(9963421-9963500)
chr5 (218-253)||(17557040-17557075)
chr5 (216-259)||(38040140-38040183)
chr5 (219-258)||(40250228-40250267)
chr5 (172-258)||(16969672-16969758)
chr5 (218-271)||(34325257-34325310)
chr5 (218-254)||(20186875-20186911)
chr5 (159-211)||(22687872-22687924)
chr5 (162-258)||(31280374-31280469)
chr5 (185-237)||(38230222-38230273)
chr5 (159-239)||(39684262-39684342)
[»] chr7 (30 HSPs)
chr7 (162-258)||(10020463-10020559)
chr7 (218-258)||(7465471-7465511)
chr7 (185-253)||(23799310-23799378)
chr7 (218-258)||(24427368-24427408)
chr7 (162-258)||(35498403-35498498)
chr7 (162-238)||(39524713-39524788)
chr7 (183-258)||(8147201-8147276)
chr7 (218-269)||(35195837-35195888)
chr7 (177-258)||(7392315-7392396)
chr7 (160-256)||(11808045-11808142)
chr7 (221-258)||(17305443-17305480)
chr7 (185-258)||(37410498-37410571)
chr7 (218-259)||(37995596-37995636)
chr7 (162-258)||(1649157-1649253)
chr7 (162-258)||(43635593-43635689)
chr7 (179-258)||(10474523-10474602)
chr7 (140-199)||(26734243-26734302)
chr7 (162-249)||(32309142-32309229)
chr7 (218-269)||(38032905-38032956)
chr7 (185-258)||(41139091-41139165)
chr7 (220-257)||(19924773-19924810)
chr7 (218-258)||(21285403-21285444)
chr7 (220-269)||(27726421-27726470)
chr7 (185-258)||(32814832-32814905)
chr7 (218-259)||(43209405-43209446)
chr7 (218-258)||(14772385-14772425)
chr7 (218-258)||(15222837-15222877)
chr7 (218-257)||(20527479-20527519)
chr7 (162-258)||(43712307-43712403)
chr7 (219-275)||(45267977-45268033)
[»] scaffold0712 (1 HSPs)
scaffold0712 (218-258)||(4525-4565)
[»] scaffold0709 (1 HSPs)
scaffold0709 (218-258)||(4545-4585)
[»] scaffold0168 (1 HSPs)
scaffold0168 (218-258)||(34083-34123)
[»] scaffold0219 (1 HSPs)
scaffold0219 (220-274)||(21016-21070)
[»] scaffold0126 (1 HSPs)
scaffold0126 (218-258)||(25011-25051)
[»] scaffold0119 (1 HSPs)
scaffold0119 (162-258)||(1044-1140)
[»] scaffold0054 (1 HSPs)
scaffold0054 (162-258)||(67166-67262)


Alignment Details
Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 368
Target Start/End: Complemental strand, 22736055 - 22735686
Alignment:
Q  1 acaattacaagtcacaatgcaacaacccaagtccaaaaccacaatataaaaaacaagccaacatcaactcaactcatatcctactaacacaaataataga 100  Q
    |||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22736055 acaattacaagtcacaatgcaacaacccaagtccaaa--cgaaatataaaaaacaagccaacatcaacgcaactcatatcctactaacacaaataataga 22735958  T
Q  101 gcataacccttaaaacaaataagatgtgtccactatttcttttgtc----agatagactatcggttagaattcacctttctcaaggtaaataagtgaggt 196  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||    ||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  22735957 gcataacccttaaaacaaataagatgtgtccactattttttttttctttcagatagactactggttagaattcacctttcccaaggtaaataagtgaggt 22735858  T
Q  197 gtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatatgtccactattaataaagctcaa 296  Q
    ||||| ||||||||||  | ||||||||||||||||| |||||||||| |||||||| |||| | |||| ||| ||||||| ||||||||| ||||||||    
T  22735857 gtccgggattcaaaccccagaccctgcatataacaatacatgtctctgtcaactgagttatgccaacggagacaatatgtcaactattaatgaagctcaa 22735758  T
Q  297 tgctataaccaccatgcaacaattaatggaactctcatcttgttctttcttctgaattcaaaatactaaagt 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22735757 tgctataaccaccatgcaacaattaatggaactctcatcttgttctttcttctgaattcaaaatactaaagt 22735686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 4844247 - 4844153
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 253  Q
    ||||||||||||| ||| ||||||| ||||||||||||||| ||| || |||||   | ||||||||||||||||||||||| ||||||||||||    
T  4844247 ggttagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatgcatgtccctgccaactgag 4844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 9031844 - 9031760
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 269  Q
    |||||||| |||||| ||| |||||||   || ||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  9031844 aataagtggggtgtctgaggttcaaacttcaagccctgcatataacaatgcatgtccctgccaactgagctatgttcacggggac 9031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 22730695 - 22730792
Alignment:
Q  162 tagaattcacctt-tctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||| | | ||||| |||||||| |||||||||| ||| |||   |  |||||||||||||||||||||||||||||||||||| ||||    
T  22730695 tagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtctctgccaactgagttatg 22730792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 30833118 - 30833022
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||| ||||| ||||||  |||||||| |||||||| | ||| ||||   | ||||||||||||||||||||||| ||||||||||| |||||    
T  30833118 tagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactatg 30833022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 7234066 - 7233995
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaat 233  Q
    |||||||||||||| ||||||| |||||||| |||||||||| ||||||||  |  ||||||||||||||||    
T  7234066 tagaattcacctttttcaaggtgaataagtggggtgtccgaggttcaaaccccagcccctgcatataacaat 7233995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 20858394 - 20858473
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||| || ||||||||  |||| ||||  || ||||||||||||||||||||||| |||||||||||| ||||    
T  20858394 aaggtaaataaatggggtgtccggaattcgaaccccaacccctgcatataacaatgcatgtccctgccaactgagttatg 20858473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 8176041 - 8176001
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  8176041 ccctgcatataacaatgcatgtctctgtcaactgagctatg 8176001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 34524920 - 34524880
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  34524920 ccctgcatataacaatgcatgtccctgccaactgagctatg 34524880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 5134445 - 5134536
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcat-gtctctgccaactgagctatgtctacggggac 269  Q
    ||||| |||||||| |||||| ||| ||| |||||    | |||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  5134445 aaggtgaataagtggggtgtctgaggttcgaaccgcggcctctgcatataacaatgcattgtctctgccaactgagctatgcttacggggac 5134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 17176194 - 17176143
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 269  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||| ||||    
T  17176194 ccctgcatataacaatgcatgtccctgtcaactgagctatgtttacgaggac 17176143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 16110964 - 16111026
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccga 202  Q
    |||||| |||||  |||| | ||||||||||||||| ||||| ||||||||||||||||||||    
T  16110964 ttttgtaagataacctattgattagaattcacctttttcaagataaataagtgaggtgtccga 16111026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 8309206 - 8309169
Alignment:
Q  221 tgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8309206 tgcatataacaatgcatgtccctgccaactgagctatg 8309169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 20149973 - 20150070
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtcc-gagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| ||||||| | | ||| ||||  || |||| |||||||||| ||| ||| || ||||||||||||||    
T  20149973 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatg 20150070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 22182859 - 22182762
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtcc-gagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| ||||||| | | ||| ||||  || |||| |||||||||| ||| ||| || ||||||||||||||    
T  22182859 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatg 22182762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 22389724 - 22389840
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tg 238  Q
    ||||||||| ||| ||| ||| |||||||||||||    ||||| |||||||| |||||||| ||||| |||| | | |||||||||||| |||||| ||    
T  22389724 ttttgtcaggtagtctagcggctagaattcaccttat--aaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcattg 22389821  T
Q  239 tctctgccaactgagctatg 258  Q
    || || ||||||||||||||    
T  22389822 tc-ctaccaactgagctatg 22389840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 26669653 - 26669749
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| |||||| | | ||| ||||  |  |||| |||||||  ||||||||| || ||||||||||||||    
T  26669653 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatg 26669749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 32394109 - 32394030
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| |||||||| |||||||| ||||||||||  || | |||||||  ||||| |||||| |||||||||||| ||||    
T  32394109 aaggtgaataagtggggtgtccgggattcaaacctcaacctctgcataagacaatacatgtccctgccaactgagttatg 32394030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 1488131 - 1488093
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  1488131 ctgcatataacaatgcatgtctctgccaattgagatatg 1488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 2945674 - 2945600
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    |||||||| |||||||||| ||  ||||   | ||||||||||||||||||| |||| |||||||||||||||||    
T  2945674 aataagtggggtgtccgaggtttgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatg 2945600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 6219393 - 6219348
Alignment:
Q  224 atataacaatgcatgtctctgccaactgagctatgtctacggggac 269  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||||    
T  6219393 atataataatgcatgtccctgccaactgagctatgttcacggggac 6219348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 30668181 - 30668274
Alignment:
Q  165 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||| ||| | ||||| |||||||| ||||| || | ||| |||  | | |||||||||||| ||||||||||| ||||||||||| ||||    
T  30668181 aattcacattttttaaggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtctatgccaactgagttatg 30668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 8253640 - 8253676
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagc 254  Q
    |||||||||||||||||||||||  ||||||||||||    
T  8253640 ccctgcatataacaatgcatgtccatgccaactgagc 8253676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 9051285 - 9051381
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||| ||||| |||||   |||||||||| |||||| | ||| |||| ||  |||| ||||||||||||||| ||  |||||| |||||||||    
T  9051285 tagaattctcctttttcaagacgaataagtgagttgtccggggttcgaaccctagtccctacatataacaatgcatatccttgccaattgagctatg 9051381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 10455787 - 10455747
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||  ||||||||||| |||||    
T  10455787 ccctgcatataacaatgcatgttcctgccaactgaactatg 10455747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 24470441 - 24470493
Alignment:
Q  218 ccctgcatataacaatgcat-gtctctgccaactgagctatgtctacggggac 269  Q
    ||||| |||||| ||||||| |||||||||||||||||||||  |||||||||    
T  24470441 ccctgtatataataatgcattgtctctgccaactgagctatgcttacggggac 24470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 216119 - 216237
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  216119 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 216218  T
Q  240 ctctgccaactgagctatg 258  Q
    | |||||||||||||||||    
T  216219 ccctgccaactgagctatg 216237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 692679 - 692797
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  692679 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 692778  T
Q  240 ctctgccaactgagctatg 258  Q
    | |||||||||||||||||    
T  692779 ccctgccaactgagctatg 692797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 696888 - 697006
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  696888 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 696987  T
Q  240 ctctgccaactgagctatg 258  Q
    | |||||||||||||||||    
T  696988 ccctgccaactgagctatg 697006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 729742 - 729860
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  729742 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 729841  T
Q  240 ctctgccaactgagctatg 258  Q
    | |||||||||||||||||    
T  729842 ccctgccaactgagctatg 729860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 853637 - 853755
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  853637 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 853736  T
Q  240 ctctgccaactgagctatg 258  Q
    | |||||||||||||||||    
T  853737 ccctgccaactgagctatg 853755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 220353 - 220452
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  220353 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 220452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 689508 - 689607
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  689508 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 689607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 733976 - 734075
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  733976 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 734075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 857872 - 857971
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  857872 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 857971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 12560161 - 12560037
Alignment:
Q  133 ctatttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaa 232  Q
    |||||| ||||||||  ||| |||  || ||||||| |||||| ||||||||||||||||||||||  ||| ||| ||||  || |||||||||||||||    
T  12560161 ctattttttttgtcaagtagtctaatggctagaattgacctttttcaaggtaaataagtgaggtgtttgaggttcgaaccccaacccctgcatataacaa 12560062  T
Q  233 tgcatgtctctgccaactgagctatg 258  Q
    ||  |||  |||||||||||||||||    
T  12560061 tg-ttgttcctgccaactgagctatg 12560037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 39432345 - 39432418
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||| |||||| ||| ||| ||||  || |||||||||||||| |||||||| |||||||||||||||||    
T  39432345 aataagtggggtgtctgaggttcgaaccccaacccctgcatataacattgcatgtccctgccaactgagctatg 39432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 22847256 - 22847344
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaact 250  Q
    |||||||||||||| | ||||| ||||||||||||||  | | ||| ||||   | ||||||||||||||||||||||| |||||||||    
T  22847256 tagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcatataacaatgcatgtccctgccaact 22847344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 11900666 - 11900572
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    |||||||||||||| ||||| | |||||||| ||| || | | ||||||||  || |||||||||||| |||||||||  ||||||||||||||||    
T  11900666 tagaattcacctttttcaagatgaataagtggggtatctgtg-ttcaaacctcaacccctgcatataataatgcatgttcctgccaactgagctat 11900572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 14011088 - 14011128
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  14011088 ccctgcatataacaatgcatgtccctgccaactgaactatg 14011128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 26657901 - 26657861
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  26657901 ccctgcatataacaatgcatgtccctaccaactgagctatg 26657861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 41793024 - 41793079
Alignment:
Q  219 cctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatatg 275  Q
    |||||||||||||||||||||| ||||||| |||||||||   ||||||||||||||    
T  41793024 cctgcatataacaatgcatgtc-ctgccaattgagctatgctcacggggacgatatg 41793079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 16621589 - 16621550
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  16621589 ccctgcatataataatgcatatctctgccaactgagctat 16621550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 25408690 - 25408735
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattc 207  Q
    |||||||||||||  ||||||||||  |||||||||||||||||||    
T  25408690 tagaattcaccttcttcaaggtaaaacagtgaggtgtccgagattc 25408735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 36593297 - 36593200
Alignment:
Q  160 gttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    |||||||||||| ||| | ||||| |||||||  | ||||  |||||| ||||  || | ||| ||||||||||||||||| || |||||||||||||    
T  36593297 gttagaattcacattttttaaggtgaataagttggatgtctaagattcgaaccccaacctctgtatataacaatgcatgtccctaccaactgagctat 36593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 39208863 - 39208904
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgag 203  Q
    |||||||||||||| | ||||| |||||||||||||||||||    
T  39208863 tagaattcacctttttaaaggtgaataagtgaggtgtccgag 39208904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 43554494 - 43554453
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    |||| |||||||||||| ||||| ||||||||||||||||||    
T  43554494 ccctacatataacaatggatgtcgctgccaactgagctatgt 43554453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 4955033 - 4955073
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||| |||||||||||||| |||| ||||    
T  4955033 ccctgcatataacaatacatgtctctgccaattgagttatg 4955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 7345473 - 7345433
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| |||||||||| |||||||||||| ||||    
T  7345473 ccctgcatataataatgcatgtccctgccaactgagttatg 7345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 29937255 - 29937215
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||| |||||| || ||||||||||||||    
T  29937255 ccctgcatataacaatacatgtccctaccaactgagctatg 29937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 42711264 - 42711184
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||||||| ||| |||||| ||||||||| | ||||||   |||||| | | | ||||||||||||||||| ||||    
T  42711264 ggttagaattcacatttttcaaggcaaataagtgggatgtccggagttcaaatcctgacccctgcatataacaatgtatgt 42711184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 49039439 - 49039535
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| ||||  |  ||||||||||||||||||||||| |||||||||||||||||    
T  49039439 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgccaactgagctatg 49039535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 41492493 - 41492588
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| |||||||||||||||| ||||||| || ||| ||||     |||||||||||| |||||||||| |||||||||||||||||    
T  41492493 tagaattcacctttttcaaggtaaataagtggggtgtcc-aggttcgaaccccggcccctgcatataataatgcatgtccctgccaactgagctatg 41492588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 54265029 - 54264933
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||| |||| ||||||| |||||||||||||| |||| ||  |||| | | |||| ||||||||||||||||| ||||||| ||||||||||    
T  54265029 tagaattcatctttttcaaggtgaataagtgaggtgttcgaggtttgaaccctgacccctacatataacaatgcatgtttctgccagctgagctatg 54264933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 21023343 - 21023441
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| ||||||| |||||||| |||||| | | ||| ||||  || ||| | |||||||||||||||| ||||||||||||||||||    
T  21023343 ggttagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaaccccaaccccgg-atataacaatgcatgtttctgccaactgagctatg 21023441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 49743466 - 49743367
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | ||| || |     |||||||||||| ||||||| || ||||||||||| |||||    
T  49743466 ggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggcccctgcatataataatgcatatccctgccaactgaactatg 49743367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 47416572 - 47416502
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataa 229  Q
    ||||||||||||||||| |||| || |||||||| |||||||||||||| ||||  || ||||||||||||    
T  47416572 ggttagaattcacctttttcaaagtgaataagtggggtgtccgagattcgaaccccaacccctgcatataa 47416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 35230292 - 35230385
Alignment:
Q  165 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||| | |||||||||||||||| |||||||||| ||| ||||   | || |||||||| |||||||| || || ||||||||||||||    
T  35230292 aattcacctatttcaaggtaaataagtggggtgtccgaggttcgaaccccgacccatgcatatagcaatgcatatccctaccaactgagctatg 35230385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 20610784 - 20610744
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  20610784 ccctgcatataacaatgcatgtccctgccaactgagctatg 20610744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 54854173 - 54854269
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||| ||| ||||||| |||||||| | |||||| | ||| ||||  |  ||||||||||||  ||||||||| |||||||||||||||||    
T  54854173 tagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatataattatgcatgtccctgccaactgagctatg 54854269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 12585553 - 12585660
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgtct 261  Q
    |||||||||||||| ||||| | |||||||||||||| || | ||| |||      || | |||||||||||||||||| |||||||||||| ||||| |    
T  12585553 tagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaactccggcccttacatataacaatgcatgtccctgccaactgagttatgttt 12585652  T
Q  262 acggggac 269  Q
    ||||||||    
T  12585653 acggggac 12585660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 20166361 - 20166323
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagcta 256  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20166361 ccctgcatataacaatgcatgtccctgccaactgagcta 20166323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 12820455 - 12820496
Alignment:
Q  218 ccctgcatataacaatgcat-gtctctgccaactgagctatg 258  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  12820455 ccctgcatataacaatgcattgtctctgccaactgagctatg 12820496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 34371046 - 34370917
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    |||| |||||||| |||| || || |||||  |||| ||||||  |||||||| ||||  ||| |||||||||   | ||||||||| ||||||||||||    
T  34371046 ttttatcagatagcctattggctaaaattcttctttttcaaggagaataagtggggtgatcgaaattcaaacctcgacccctgcatacaacaatgcatgt 34370947  T
Q  240 ctctgccaactgagctatgtctacggggac 269  Q
    ||||| |||| || |||||| || ||||||    
T  34370946 ctctgtcaaccgaactatgtttatggggac 34370917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 1589207 - 1589247
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  1589207 ccctgcatataacaatgcatgtcaccgccaactgagctatg 1589247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 4419736 - 4419776
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  4419736 ccctgcatataacaatgcatgtctctgacaactgagttatg 4419776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 38657585 - 38657549
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagc 254  Q
    ||||||||||||||||||||||| |||||||||||||    
T  38657585 ccctgcatataacaatgcatgtccctgccaactgagc 38657549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 48512283 - 48512203
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||| |||||||| |||||||| | | | |||| ||  ||||||||||||||||||| |||| |||||||||||||||||    
T  48512283 aaggtgaataagtggggtgtccggggtacgaaccctagcccctgcatataacaatgcattgtccctgccaactgagctatg 48512203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 6202704 - 6202613
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 253  Q
    |||||||||||||| ||||| | |||||||  |||||||| | ||| |||| ||  |||| |||| ||||| ||||||| ||||||||||||    
T  6202704 tagaattcacctttttcaagatgaataagtagggtgtccggggttcgaaccctagcccctacataaaacaaagcatgtcgctgccaactgag 6202613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 36045930 - 36045835
Alignment:
Q  163 agaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||| ||||  | | |||||||||||||||   ||| || |  || ||||||||||||||||||||||| ||| ||| |||||||||    
T  36045930 agaattcacctttttcaatatgactaagtgaggtgtccggagttcgaatctcaacccctgcatataacaatgcatgtccctgtcaattgagctatg 36045835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 37997840 - 37997931
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 253  Q
    ||||||||| | || | ||||| |||||||| |||||| | | ||| ||||  | |||||||||||||||||| ||||| ||||||||||||    
T  37997840 tagaattcatcctttttaaggtgaataagtggggtgtctggggttcgaaccccagaccctgcatataacaatgaatgtccctgccaactgag 37997931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 42432053 - 42432018
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgag 253  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42432053 ccctgcatataacaatgcatgtccctgccaactgag 42432018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 9084837 - 9084763
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    |||||||| |||||||||| ||| || |   | ||||||||||||||||||| |||| |||||||||||||||||    
T  9084837 aataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcattgtccctgccaactgagctatg 9084763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 24039985 - 24039893
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||||||||| || | ||| ||||   | ||   |||||||||||||||||| ||| |||||||||||||    
T  24039985 tagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaaccccgaccc---catataacaatgcatgtc-ctgtcaactgagctatg 24039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 31480316 - 31480274
Alignment:
Q  218 ccctgcatataacaatgca-tgtctctgccaactgagctatgt 259  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  31480316 ccctgcatataacaatgcattgtccctgccaactgagctatgt 31480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 43049981 - 43050023
Alignment:
Q  216 aaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  43049981 aaccctgcatataacaatgcatgttcctgtcaactgagctatg 43050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 49319492 - 49319398
Alignment:
Q  165 aattcacctttct-caaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||| | |||||| |||||||| |||||||| | ||  ||||   | |||||||||||| ||||||||||  ||||||||||||||||    
T  49319492 aattcaccttttttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtccatgccaactgagctatg 49319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 56913 - 56950
Alignment:
Q  221 tgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  56913 tgcatataacaatgcatgtccctgccaactgagttatg 56950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 36008320 - 36008279
Alignment:
Q  218 ccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  36008320 ccctgcatataacaatgcattgtccctgccaactgagctatg 36008279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 27921941 - 27921901
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| |||||||||| || ||||||||||||||    
T  27921941 ccctgcatataataatgcatgtccctaccaactgagctatg 27921901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 9768803 - 9768899
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| ||||   | ||||||||||||||||||||||| |||||||||||||||||    
T  9768803 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctatg 9768899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 9769571 - 9769670
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| | ||| ||||  || |||| ||||||| |||||||||| |||||||||||||||||    
T  9769571 ggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgccaactgagctatg 9769670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 43020712 - 43020616
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||| ||| ||||||| ||| |||| |||||||||| ||| ||||  || |||||||||||| |||||||||| |||||||| ||||||||    
T  43020712 tagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtccctgccaaccgagctatg 43020616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 50576030 - 50575907
Alignment:
Q  134 tatttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaat 233  Q
    ||||| ||||||||  ||| ||| ||| || ||||||||||| | ||||| ||||||||||||||| ||| ||| ||||  |  || |||||||||||||    
T  50576030 tattttttttgtcaagtagcctaacggctataattcaccttttttaaggtgaataagtgaggtgtctgaggttcgaaccccagcccttgcatataacaat 50575931  T
Q  234 gcatgtctctgccaactgagctat 257  Q
    ||||||| || |||||||||||||    
T  50575930 gcatgtcccttccaactgagctat 50575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 13941423 - 13941325
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    ||||||||||||| ||| ||||| | |||||||| |||||||||  ||| ||||   |||||||||||||||||||||||||  |||||||||| ||||    
T  13941423 ggttagaattcacttttttcaagatgaataagtggggtgtccgaagttcgaacctcgaaccctgcatataacaatgcatgtccttgccaactgaactat 13941325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 5684199 - 5684127
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||| |||||| ||| ||||| || ||| |||||||||||| ||||||||||||||||||||||||||||    
T  5684199 aataagtggggtgtctgaggttcaatcc-taacccctgcatataataatgcatgtctctgccaactgagctatg 5684127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 3341730 - 3341826
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| | ||     |||||||||||| |||||||||| |||||||||||||||||    
T  3341730 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtccctgccaactgagctatg 3341826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 11238022 - 11238118
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||| | |||||||| |||||||| ||||| ||||   | |||||||||||| ||||||||||  ||||| ||||||||||    
T  11238022 tagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatgtccatgccatctgagctatg 11238118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 256
Target Start/End: Complemental strand, 41677187 - 41677067
Alignment:
Q  136 tttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgc 235  Q
    |||||||| |||| ||| |||  || |||||||||||||| ||||||| |||||||| ||||||||   ||| ||||   | ||| |||||||| ||||     
T  41677187 tttcttttttcaggtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatga 41677088  T
Q  236 atgtctctgccaactgagcta 256  Q
    |||||||||||||||||||||    
T  41677087 atgtctctgccaactgagcta 41677067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 1721263 - 1721145
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||  ||| ||| ||| |||||||||||||| | ||||| ||||||||||||||||| | ||| || |     ||||||||||||||||||||||    
T  1721263 ttttgtcaagtagcctaacggctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgt 1721164  T
Q  240 ctctgccaactgagctatg 258  Q
      || ||||||||||||||    
T  1721163 tcctaccaactgagctatg 1721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 2643787 - 2643905
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||| ||| |||  ||||||| ||||| ||| | ||||| |||||||| |||||| | | ||||||||   | || ||||||||| |||||||||    
T  2643787 ttttgtcaggtagtctagtggttagagttcacattttttaaggtgaataagtggggtgtctggggttcaaaccccgacccatgcatataataatgcatgt 2643886  T
Q  240 ctctgccaactgagctatg 258  Q
    ||||||||||| |||||||    
T  2643887 ctctgccaactaagctatg 2643905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 47645848 - 47645886
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47645848 ctgcatataacaatgcatgtctctgccaactgagctatg 47645886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 195148 - 195051
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagcta 256  Q
    ||||||||||||||||| ||||||| |||||||| |||||| | | | | ||||  |  ||||||||||||  ||||||||| |||||||||||||||    
T  195148 ggttagaattcacctttttcaaggtgaataagtggggtgtctggggtacgaacctcagcccctgcatataattatgcatgtccctgccaactgagcta 195051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 42801922 - 42801873
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 269  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  42801922 ctgcatataacaatgcatgtctctgtcaactgagctatgttcacggggac 42801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 48565141 - 48565238
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    |||||||||||||| |||| ||||||||||| |||||||||| ||| || | ||  || ||||||||||||||  | || |||||||||||| |||||    
T  48565141 tagaattcacctttttcaaagtaaataagtggggtgtccgaggttcgaaacttagtccttgcatataacaatgtttatccctgccaactgagatatgt 48565238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 18003861 - 18003821
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  18003861 ccctgcatataacaatgcatgtccctgccaactgagctatg 18003821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 4511516 - 4511627
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| | ||||| |||||||| |  ||||| |||||||||    | |||||||||||| ||||||||||  |||||| |||| ||||    
T  4511516 ggttagaattcaccttttttaaggtgaataagtgggacgtccgggattcaaacaccgacccctgcatataataatgcatgtccttgccaattgagttatg 4511615  T
Q  259 tctacggggacg 270  Q
    |  |||||||||    
T  4511616 ttcacggggacg 4511627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 16182913 - 16182814
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||  ||| ||||| | |||||||| |||||||| | ||  ||||  |  |||| ||||||| ||||||||||||||||||||||||||||    
T  16182913 ggttagaattcatatttttcaagatgaataagtggggtgtccggggtttgaaccccagcccctacatataataatgcatgtctctgccaactgagctatg 16182814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 18646790 - 18646693
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| |||| | ||||||||| ||||| ||   ||||||||| || |||||||||| ||||||||||||  ||||||||||| ||||    
T  18646790 ggttagaattcacctttttcaaagaaaataagtg-ggtgttcggagttcaaaccgcaa-ccctgcatatcacaatgcatgtccatgccaactgagttatg 18646693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 9410320 - 9410417
Alignment:
Q  160 gttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| ||||||||||| ||||| | |||||||| |||||| ||| ||| || | | ||||||||||||||| |||||||||  |||||||||| |||||    
T  9410320 gttaaaattcacctttttcaagatgaataagtggggtgtctgaggttcgaatc-tcaaccctgcatataactatgcatgtccttgccaactgaactatg 9410417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 42908816 - 42908778
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagcta 256  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42908816 ccctgcatataacaatgcatgtccctgccaactgagcta 42908778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 4605836 - 4605932
Alignment:
Q  161 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||| | ||||| ||||| ||||||||| ||| ||  |||  |   ||||||||||||||||||||||||||| |||||||| ||||    
T  4605836 ttagaattcaccttttttaaggtgaataaatgaggtgtctgaggtttgaact-tggcccctgcatataacaatgcatgtctctgtcaactgagttatg 4605932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 12489969 - 12490010
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  12489969 ccctgcatataaaaatgcatgtctttgccaactgagctatgt 12490010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 18976048 - 18976007
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  18976048 ccctgcatataacaatgcatgtctctgacaattgagctatgt 18976007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 4146379 - 4146339
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  4146379 ccctgcatataacaatgcatgtttctgtcaactgagctatg 4146339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 5862168 - 5862132
Alignment:
Q  223 catataacaatgcatgtctctgccaactgagctatgt 259  Q
    |||||||||||||||||| ||||||||||||||||||    
T  5862168 catataacaatgcatgtccctgccaactgagctatgt 5862132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 8890082 - 8890126
Alignment:
Q  163 agaattcacctttctcaaggtaaataagtgaggtgtccgagattc 207  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||    
T  8890082 agaattcacatttctcaaggtaaataagtgaggtatccgggattc 8890126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 18179373 - 18179333
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  18179373 ccctgcatataacaatgcatgtccctgccaactgagttatg 18179333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 52961132 - 52961172
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  52961132 ccctgcatataacaatgcatgtccttgccaactgagctatg 52961172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 2903021 - 2903112
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 253  Q
    |||||||| ||||| ||||||| |||||||| ||||| || | ||| ||||   | | ||||||||||||||||||||| ||| ||||||||    
T  2903021 tagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatgcatgtccctggcaactgag 2903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 47939246 - 47939289
Alignment:
Q  216 aaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  47939246 aaccctgcatataacaatgcattgtccctgccaactgagctatg 47939289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 9527504 - 9527430
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    |||||||| |||||||  | ||||||||   | ||||||||||||||||||| |||| |||||||||||||||||    
T  9527504 aataagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatg 9527430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 13870098 - 13870172
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcat-gtctctgccaactgagctatg 258  Q
    |||||||| |||||||| ||||||||||     |||||||||||| ||||||| ||| |||||||||||||||||    
T  13870098 aataagtggggtgtccgggattcaaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 13870172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 28417330 - 28417368
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  28417330 ctgcatataagaatgcatgtctctgccaactgagttatg 28417368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 51917554 - 51917592
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  51917554 ctgcatataataatgcatgtctatgccaactgagctatg 51917592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 9074043 - 9074002
Alignment:
Q  216 aaccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||    
T  9074043 aaccctgcatataacaatgtatgtccctgtcaactgagctat 9074002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 37262154 - 37262195
Alignment:
Q  217 accctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||| ||||||| ||||||||||| |||||    
T  37262154 accctgcatataacaacgcatgtccctgccaactgaactatg 37262195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 1576114 - 1576154
Alignment:
Q  161 ttagaattcacctttctcaaggtaaataagtgaggtgtccg 201  Q
    ||||||||||| ||| |||||||||||||||| ||||||||    
T  1576114 ttagaattcacttttttcaaggtaaataagtggggtgtccg 1576154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 7015737 - 7015777
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  7015737 ccctacatataacaatgcatgtcccagccaactgagctatg 7015777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 7906376 - 7906416
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| || |||||||| |||||    
T  7906376 ccctgcatataacaatgcatgtccctaccaactgaactatg 7906416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 9004391 - 9004351
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||  ||||| |||||||||||||||||    
T  9004391 ccctgcatataacaatatatgtccctgccaactgagctatg 9004351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 18923896 - 18923975
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||| |||| ||| |||||||||| ||| |||| | |||||||||||||| |||||| |||| || ||||||||||||||    
T  18923896 aaggtgaatacgtggggtgtccgaggttcgaaccctgaaccctgcatataataatgcattgtc-ctaccaactgagctatg 18923975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 23758303 - 23758343
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| |||||| || ||||||||||||||||||    
T  23758303 ccctgcatataataatgcacgtttctgccaactgagctatg 23758343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 28284008 - 28284040
Alignment:
Q  226 ataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| ||||||||||||||||||||||||||||    
T  28284008 ataataatgcatgtctctgccaactgagctatg 28284040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 33176153 - 33176193
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  33176153 ccctgcatataacaatgcatatccctaccaactgagctatg 33176193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 41182874 - 41182803
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatg 234  Q
    |||||||||||||| |||| || |||||||| |||||||| | ||||||||   | |||||||||||||||||    
T  41182874 tagaattcaccttt-tcaaagtgaataagtggggtgtccggggttcaaaccccgacccctgcatataacaatg 41182803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 47141856 - 47141896
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| ||| |||||||| ||||    
T  47141856 ccctgcatataacaatgcatgtccctgtcaactgagttatg 47141896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 40160836 - 40160740
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| | ||||| |||||||| |||||||| | ||||||||  |  ||| ||||||||||||||||||| ||||||| |||||||||    
T  40160836 tagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccagccccggcatataacaatgcatgtccctgccaattgagctatg 40160740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 4045624 - 4045723
Alignment:
Q  158 cggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    |||||||||||||||||| ||||| | |||||||| |||||||||  ||| ||||   | ||||||||||||||||||||||| ||| ||||||| ||||    
T  4045624 cggttagaattcacctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcatgtccctgtcaactgaactat 4045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 28951970 - 28951871
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||| ||| ||||||| |||||||| ||||| || | ||| |||| | | |||||||||||| ||||||||| ||||||||||||| ||||    
T  28951970 ggttagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgccaactgagttatg 28951871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 16874240 - 16874280
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  16874240 ccctgcatataacaatgcatgtccctgccaactgagctatg 16874280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 24130656 - 24130564
Alignment:
Q  166 attcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| |||| ||||||| |||||||| |||||||| | ||||||||     ||||||||||||||||| ||||| |||||||||||| ||||    
T  24130656 attcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatgtccctgccaactgagttatg 24130564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 3993698 - 3993797
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| || |||| ||  |||| || |||||||| | |||||||||    ||||||||||||||||||||||| ||  |||||||||||||    
T  3993698 ggttagaattcaccattttcaaagtgcataaatggggtgtccggggttcaaaccgcggcccctgcatataacaatgcatgtccctctcaactgagctatg 3993797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 4010009 - 4010108
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| | || ||||||| ||||| || ||||| || | ||||||| |    ||||||||||||||||||||||| || ||||||||||||||    
T  4010009 ggttagaattcaacattttcaaggtgaataaatggggtgttcggggttcaaactgcggcccctgcatataacaatgcatgtccctaccaactgagctatg 4010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 3973397 - 3973307
Alignment:
Q  168 tcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| || ||||||| ||||| || |||||||| | |||||| ||    ||||||||||||||||||||||| || ||||||||||||||    
T  3973397 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgagctatg 3973307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 3996479 - 3996569
Alignment:
Q  168 tcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| || ||||||| ||||| || |||||||| | |||||| ||    ||||||||||||||||||||||| || ||||||||||||||    
T  3996479 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgagctatg 3996569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 6054197 - 6054255
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgt 198  Q
    |||||||| |||| |||  ||||||||||||||||| ||||||| ||||||||||||||    
T  6054197 ttttgtcaaatagtctagtggttagaattcacctttttcaaggtgaataagtgaggtgt 6054255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 12143460 - 12143498
Alignment:
Q  221 tgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12143460 tgcatataacaatgcatgtccctgccaactgagctatgt 12143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 51017834 - 51017796
Alignment:
Q  219 cctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  51017834 cctgcatataacaatgcatgtccctgccaactgagctat 51017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 19137664 - 19137624
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  19137664 ccctgcatataacaatgcatgttcctgccaactgagctatg 19137624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 24160578 - 24160618
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  24160578 ccctgcatataacagtgcatgtctctgccaactgagttatg 24160618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 30745785 - 30745821
Alignment:
Q  222 gcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30745785 gcatataacaatgcatgtccctgccaactgagctatg 30745821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 17262321 - 17262270
Alignment:
Q  161 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaacc 212  Q
    ||||||||||||||| ||||||| |||||||| |||||||| ||||| ||||    
T  17262321 ttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaacc 17262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 19149522 - 19149435
Alignment:
Q  165 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 252  Q
    |||||| |||| |||| |||||||| ||  ||||| | | |||||||| | |||||| ||||||| |||||||||||||| |||||||    
T  19149522 aattcatctttttcaaagtaaataaatggagtgtctggggttcaaaccctgaaccctacatataataatgcatgtctctgtcaactga 19149435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 23026001 - 23025902
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| | || || |||||||| |||||| | | ||||||||  || | || ||| ||| ||||||||| |||||||||| |||||||    
T  23026001 ggttagaattcaccttttttaaagtgaataagtggggtgtctggggttcaaacctcaatcgctacatttaataatgcatgtttctgccaacttagctatg 23025902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 33533243 - 33533208
Alignment:
Q  223 catataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33533243 catataacaatgcatgtctctgccaactgagttatg 33533208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 34407084 - 34407175
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 253  Q
    ||||||||| | || ||||| | |||||||| |||||| | | ||| ||||  || |||||||||||| |||||||||| ||||||||||||    
T  34407084 tagaattcatcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccctgccaactgag 34407175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 51412041 - 51412080
Alignment:
Q  219 cctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  51412041 cctgcatataacaatgcatgtccctgccaactgaactatg 51412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 12236644 - 12236606
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagcta 256  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  12236644 ccctgcatataataatgcatgtccctgccaactgagcta 12236606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 16985121 - 16985031
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 252  Q
    |||||||||| ||| | || || ||||||||  |||| |||| ||||||||  || |||| ||||||| |||| |||||||||||||||||    
T  16985121 tagaattcactttttttaaagtgaataagtggagtgttcgaggttcaaacccaaacccctacatataataatgaatgtctctgccaactga 16985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 31680854 - 31680737
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    |||||||| |||| |||  || || ||||||||||| | ||||| |||||||| |||||||||  ||||||||  || | || | |||||||||||||||    
T  31680854 ttttgtcaaatagtctagtggctaaaattcaccttttt-aaggtgaataagtggggtgtccgaagttcaaaccccaacctctacgtataacaatgcatgt 31680756  T
Q  240 ctctgccaactgagctatg 258  Q
    | || | ||||||||||||    
T  31680755 ccctacaaactgagctatg 31680737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 6951802 - 6951880
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaa-ccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| |||||||| |||||||||| |||||| |||  | |||||||||||| |||||||||| ||| |||||||| ||||    
T  6951802 aaggtgaataagtgcggtgtccgaggttcaaatccg--acccctgcatataataatgcatgtccctgtcaactgagttatg 6951880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 46969037 - 46969008
Alignment:
Q  224 atataacaatgcatgtctctgccaactgag 253  Q
    ||||||||||||||||||||||||||||||    
T  46969037 atataacaatgcatgtctctgccaactgag 46969008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 23237407 - 23237367
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  23237407 ccctacatataataatgcatgtccctgccaactgagctatg 23237367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 27119377 - 27119293
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgcc 246  Q
    |||||||| ||||| | |||| ||||||||| ||||| || ||||| ||||   | | ||||||||||||||||||||| |||||    
T  27119377 tagaattctcctttttaaaggaaaataagtggggtgttcgggattcgaaccccgacctctgcatataacaatgcatgtccctgcc 27119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 40996950 - 40996882
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgcca 247  Q
    ||||| |||||||| |||| ||||||||| |||  |   |||||||||||||||||||| |||||||||    
T  40996950 aaggtgaataagtggggtgcccgagattcgaactatgccccctgcatataacaatgcatatctctgcca 40996882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 41767779 - 41767859
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||| |||||||| |||| ||||||||| |||  | | ||||||||||||||||||| |||  ||||||||||| |||||    
T  41767779 aaggtgaataagtggggtgcccgagattcgaacaatgacccctgcatataacaatgcattgttcctgccaactgaactatg 41767859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 43774230 - 43774190
Alignment:
Q  218 ccctgcatataacaatgca-tgtctctgccaactgagctat 257  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  43774230 ccctgcatataacaatgcattgtccctgccaactgagctat 43774190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 43911659 - 43911619
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||  ||||||||||||||| |||||||    
T  43911659 ccctgcatataacaatatatgtctctgccaactaagctatg 43911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 18065358 - 18065259
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| ||||||| ||| ||||||| ||||||| |||||| || | ||| ||||  || ||||||||||||||||||||| |||| ||||||||||||||    
T  18065358 ggttaaaattcacatttttcaaggtgaataagtaaggtgttcggggttcgaacctcaacccctgcatataacaatgcatgcctctaccaactgagctatg 18065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 36386105 - 36386203
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| |||| | || || |||||||| |||||||||||||||||||   | |||||||||||||||||||| || || ||||||||||||||    
T  36386105 ggttagaattcatcttttttaaagtgaataagtggggtgtccgagattcaaacc-cgacccctgcatataacaatgcatatccctaccaactgagctatg 36386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 2057581 - 2057486
Alignment:
Q  161 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||| | ||||| |||||||| |||||||| ||||| |||  |  |||||||||||||||||| || || |||||||||||||||||    
T  2057581 ttagaattcaccttttttaaggtgaataagtggggtgtccgggattcgaac--tcgaccctgcatataacaatgtatatccctgccaactgagctatg 2057486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 1244670 - 1244574
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| ||||   | ||||||||||| ||||| ||||| ||||||||||| |||||    
T  1244670 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaactgaactatg 1244574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 29896152 - 29896252
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| |||| ||||||| |||||||| |||||||  ||||| |||| | |  | |||||||||||||||||||| ||| |||||||| ||||    
T  29896152 ggttagaattcatctttttcaaggtgaataagtggggtgtccatgattcgaaccctgactcatgcatataacaatgcatgtcactgtcaactgagatatg 29896251  T
Q  259 t 259  Q
    |    
T  29896252 t 29896252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 16310101 - 16310016
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaa 248  Q
    |||||||||||||| ||||||||||||||||  ||||| ||| |||||| |  ||| |||||| |||||||||||||||||| ||||    
T  16310101 tagaattcacctttttcaaggtaaataagtggagtgtcagaggttcaaatc-caaatcctgcaaataacaatgcatgtctctaccaa 16310016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 44132615 - 44132652
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44132615 ctgcatataacaatgcatgtctctgccaactgagctat 44132652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 18089830 - 18089734
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||| ||| ||||||| ||||||||||||||| | | ||| |||  |   |||||||||  | ||||||||||||||||||||||||||||    
T  18089830 tagaattcacgtttttcaaggtgaataagtgaggtgtctggggttcgaactctggcccctgcatagtataatgcatgtctctgccaactgagctatg 18089734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 22355184 - 22355088
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||  |||||| |||||||| |||||| |   ||| || |  || ||||||| |||||||||||||||  ||||||||||||||||    
T  22355184 tagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatgcatgtccttgccaactgagctatg 22355088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 34107375 - 34107279
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||| ||| ||||||| |||||||| |||||| |   ||| ||||  || ||||||||||||  || |||||| |||||||||||||||||    
T  34107375 tagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtccctgccaactgagctatg 34107279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 36277752 - 36277792
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  36277752 ccctacatataacaatgcatgtcactgccaactgagctatg 36277792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 10602050 - 10602019
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaac 249  Q
    ||||||||||||||||||||||||||||||||    
T  10602050 ccctgcatataacaatgcatgtctctgccaac 10602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 19352909 - 19352870
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  19352909 ctgcatataacaatgcatgtctctgtcaactgagttatgt 19352870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 32288462 - 32288383
Alignment:
Q  177 tcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagcta 256  Q
    ||||||| |||||||| |||||||||| ||| ||||   | |||| ||||||| ||||||||| |||| |||||||||||    
T  32288462 tcaaggtgaataagtggggtgtccgaggttcgaaccccgatccctacatataataatgcatgtttctgtcaactgagcta 32288383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 32944106 - 32944059
Alignment:
Q  219 cctgcatataacaatgcatgtctctgccaactgagctatgtctacggg 266  Q
    ||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  32944106 cctgcatataataatgcatgtccatgccaactgagctatgtttacggg 32944059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 34376600 - 34376553
Alignment:
Q  205 ttcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 252  Q
    |||||||| |||  |||||||||||||||||||||| |||||||||||    
T  34376600 ttcaaaccctaactcctgcatataacaatgcatgtccctgccaactga 34376553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 6496486 - 6496444
Alignment:
Q  216 aaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||| |||||||||||||||||| || ||||||||||||||    
T  6496486 aaccctacatataacaatgcatgtcccttccaactgagctatg 6496444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 29713083 - 29713173
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 252  Q
    ||||||||| |||| | |||||||||||||  |||||| | | ||| ||||  || ||||||||||||||||| |||||  ||||||||||    
T  29713083 tagaattcatcttttttaaggtaaataagtagggtgtctggggttcgaaccccaatccctgcatataacaatgtatgtccgtgccaactga 29713173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 13294434 - 13294475
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||    
T  13294434 ccctgcatataacaatgcatgtccctgccaattgaactatgt 13294475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 28679920 - 28679879
Alignment:
Q  160 gttagaattcacctttctcaaggtaaataagtgaggtgtccg 201  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  28679920 gttagaatttaccttttgcaaggtaaataagtgaggtgtccg 28679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 32527127 - 32527176
Alignment:
Q  218 ccctgcatataacaatgcat-gtctctgccaactgagctatgtctacggg 266  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| ||||||    
T  32527127 ccctgcatataataatgcattgtccctgccaactgagctatgtttacggg 32527176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 2394945 - 2394997
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtg 192  Q
    |||||||| | || |||| ||||||||||||||||| ||||||| ||||||||    
T  2394945 ttttgtcaaaaagtctattggttagaattcacctttttcaaggtgaataagtg 2394997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 5772905 - 5772865
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||| ||||||  ||||||||||||||||    
T  5772905 ccctgcatataacaatacatgtccttgccaactgagctatg 5772865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 11133160 - 11133080
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||| |||||||| |||||||| | ||| ||||   | ||||||||||||||||||| |||| || ||||||||||||||    
T  11133160 aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgagctatg 11133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 14307744 - 14307780
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagc 254  Q
    ||||||||||||||||||||||| || ||||||||||    
T  14307744 ccctgcatataacaatgcatgtccctaccaactgagc 14307780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 39118523 - 39118403
Alignment:
Q  133 ctatttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaa 232  Q
    |||||| ||||||||| ||| |||  || |||||||| ||||| | ||||  |||||||| ||||| || ||||| |||  |   |||||||||||||||    
T  39118523 ctattttttttgtcaggtagtctagtggctagaattctccttttttaaggagaataagtggggtgttcgggattcgaactctggcccctgcatataacaa 39118424  T
Q  233 tgcatgtctctgccaactgag 253  Q
    || ||||| || |||||||||    
T  39118423 tgtatgtccctaccaactgag 39118403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 19388 - 19477
Alignment:
Q  161 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaact 250  Q
    ||||||||||||||| |||| || ||||| ||||||||||||| ||||| ||  || |||| ||||||||||||||||||  ||||||||    
T  19388 ttagaattcacctttttcaaagtgaataaatgaggtgtccgaggttcaatccccaacccctacatataacaatgcatgtccgtgccaact 19477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 38040363 - 38040271
Alignment:
Q  165 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||| ||||| | |||||||| | |||||||| ||| ||||   | ||||||||||||||||||||||| |||||||||||||||||    
T  38040363 aattcacctttttcaagatgaataagtgggatgtccgag-ttcgaacctcgacccctgcatataacaatgcatgtccctgccaactgagctatg 38040271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 7147013 - 7147109
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| |||| |||||||| ||||||||| ||| ||| ||||   | |||||||||||| ||||||||||  | ||||||||||||||    
T  7147013 tagaattcacctttttcaatgtaaataaatgaggtgtcagaggttcgaaccccgacccctgcatataataatgcatgtccttaccaactgagctatg 7147109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 42781642 - 42781683
Alignment:
Q  216 aaccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  42781642 aaccctgcatataacaatgcatgtccctgccaactgagctat 42781683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 11246544 - 11246584
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  11246544 ccctgcatataacaatgcatgtccctgccaactgagctatg 11246584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 25660957 - 25660901
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatat 274  Q
    |||||||||||||||||||| || |||||||||||||||||   |||||||||||||    
T  25660957 ccctgcatataacaatgcatatccctgccaactgagctatgctcacggggacgatat 25660901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 31556919 - 31556823
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||| || ||||||| |||||||| |||||||| | ||| |||    | ||||||||||||||||||||||| |||| || |||||||||    
T  31556919 tagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcatgtccctgctaagtgagctatg 31556823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 36742017 - 36742057
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  36742017 ccctgcatataacaattcatgtctctgccaactgagctatg 36742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 42553133 - 42553230
Alignment:
Q  160 gttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| ||| ||||||| ||||||||  ||||||| | ||| ||||   | |||||||||||||||||||||||  || |||||||||||||    
T  42553133 gttagaattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccga-ccctgcatataacaatgcatgtcgttgtcaactgagctatg 42553230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 6806690 - 6806731
Alignment:
Q  218 ccctgcatataacaatgcat-gtctctgccaactgagctatg 258  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  6806690 ccctgcatataacaatgcattgtctctgccaactgagctatg 6806731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 28768701 - 28768600
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||| |||||||  ||||||||| |||  | ||||| |||  | | || ||||||| |||||||||||| || |||||||| |||||    
T  28768701 ggttagaattcacctttttcaaggtggataagtgagatgtttgggattcgaactctgacccttgcatatgacaatgcatgtccctaccaactgaactatg 28768602  T
Q  259 tc 260  Q
    ||    
T  28768601 tc 28768600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 31907737 - 31907657
Alignment:
Q  177 tcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    ||||||| |||||||| ||||| |||| ||  |||| | | ||||||||||||||||||||||| |||| |||||| ||||    
T  31907737 tcaaggtgaataagtggggtgttcgaggtttgaaccatgacccctgcatataacaatgcatgtccctgcaaactgacctat 31907657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 35813292 - 35813332
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  35813292 ccctgcatataacaatgcatgtccctgtcaactgagctatg 35813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 257
Target Start/End: Complemental strand, 9963500 - 9963421
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctat 257  Q
    ||||| |||||||| || ||||||  ||| ||||  || ||||||||||||||||||| |||| ||||||||||||||||    
T  9963500 aaggtgaataagtggggggtccgaagttcgaaccccaacccctgcatataacaatgcattgtccctgccaactgagctat 9963421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 17557075 - 17557040
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgag 253  Q
    |||| |||||||||||||||||||||||||||||||    
T  17557075 ccctacatataacaatgcatgtctctgccaactgag 17557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 38040140 - 38040183
Alignment:
Q  216 aaccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    |||||||||||||||||||||||||  |||||||||| ||||||    
T  38040140 aaccctgcatataacaatgcatgtccttgccaactgaactatgt 38040183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 40250228 - 40250267
Alignment:
Q  219 cctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  40250228 cctgcatataacaatgcatgttactgccaactgagctatg 40250267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 16969672 - 16969758
Alignment:
Q  172 ctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| ||||||| |||||||| |||||  ||||||||||||   | |||| |||| ||||||||||||| || |||||| |||||||    
T  16969672 ctttttcaaggtgaataagtggggtgtttgagattcaaaccccgatccctacataaaacaatgcatgtccctaccaactaagctatg 16969758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 34325310 - 34325257
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacga 271  Q
    |||||||||||| |||||||||| ||| ||||||||| ||||  ||||||||||    
T  34325310 ccctgcatataataatgcatgtccctgtcaactgagccatgttcacggggacga 34325257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 20186911 - 20186875
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagc 254  Q
    |||||||||||| |||||||||| |||||||||||||    
T  20186911 ccctgcatataataatgcatgtccctgccaactgagc 20186875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 22687872 - 22687924
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaac 211  Q
    ||||||||||||||||| ||||||| |||||||| ||||| || | |||||||    
T  22687872 ggttagaattcacctttttcaaggtgaataagtggggtgttcggggttcaaac 22687924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 31280374 - 31280469
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| |||||||  ||||||| ||||| || | ||| |||| |   |||||||||||  ||| |||||| |||||||||||||||||    
T  31280374 tagaattcacctttttcaaggtggataagtg-ggtgttcggggttcgaaccttggcccctgcatatagtaatacatgtccctgccaactgagctatg 31280469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 38230222 - 38230273
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcat 237  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||||||||||    
T  38230222 aataagtgaggtgtccgggattcaaacc-cgacccctgcatataacaatgcat 38230273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 39684342 - 39684262
Alignment:
Q  159 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 239  Q
    ||||||||||||||||| | ||||| |||||||| | |||||| | || ||| | | | |||| |||||||||||||||||    
T  39684342 ggttagaattcaccttttttaaggtgaataagtgggatgtccggggtttaaatcctgacccctacatataacaatgcatgt 39684262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 10020463 - 10020559
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||| | |||||||| | ||| || | ||| ||||  || ||||||||||||||||||||||| ||| |||||||||||||    
T  10020463 tagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcatgtccctgtcaactgagctatg 10020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 7465511 - 7465471
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7465511 ccctgcatataataatgcatgtctctgccaactgagctatg 7465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 23799378 - 23799310
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 253  Q
    |||||||| |||||||||| ||| || |   | ||||||||||||||||||||||||||||||||||||    
T  23799378 aataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcatgtctctgccaactgag 23799310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 24427408 - 24427368
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  24427408 ccctgcatataacaatgcatgtctctgccaactgagttatg 24427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 35498498 - 35498403
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| |||| || |||||||| |||||||||  ||  ||||  || |||||||||||| |||||||||| |||||||||||| ||||    
T  35498498 tagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaaccc-aacccctgcatataataatgcatgtccctgccaactgagttatg 35498403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 39524788 - 39524713
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatg 238  Q
    |||||||||||||| |||| |||||||| |||||||| || ||||| ||||  || |||||||||||||||||||||    
T  39524788 tagaattcacctttttcaaagtaaataaatgaggtgttcg-gattcgaacctcaacccctgcatataacaatgcatg 39524713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 8147201 - 8147276
Alignment:
Q  183 taaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||| |||  |||   | || |||||||||||||||||||| ||||||| |||||||||    
T  8147201 taaataagtgaggtgtccgaggttcgtacccggacccttgcatataacaatgcatgtccctgccaattgagctatg 8147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 35195888 - 35195837
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 269  Q
    |||||||||||| |||||||||| |||||||||||||||||  |||||||||    
T  35195888 ccctgcatataataatgcatgtccctgccaactgagctatgcttacggggac 35195837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 7392315 - 7392396
Alignment:
Q  177 tcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||| |||||||| ||||| || | ||||||||  || | ||||||||||||||||||||  ||||||| |||||||||    
T  7392315 tcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcatgttcctgccaattgagctatg 7392396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 11808142 - 11808045
Alignment:
Q  160 gttagaattcacctttctc-aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagcta 256  Q
    |||||||||||| ||| || ||||| |||||||| |||||||| | ||| ||||   | ||||||||||||||||||||||| || |||| |||||||    
T  11808142 gttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctaccaattgagcta 11808045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 17305443 - 17305480
Alignment:
Q  221 tgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17305443 tgcatataacaatgcatgtccctgccaactgagctatg 17305480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 37410498 - 37410571
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||||||   ||| |||| | | |||||||||||||||||||||||  | ||||||||||||||    
T  37410498 aataagtgaggtgtccggagttcgaaccttgacccctgcatataacaatgcatgtccttaccaactgagctatg 37410571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 37995596 - 37995636
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  37995596 ccctgcatataaca-tgcatgtctctgccaactgagctatgt 37995636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 1649253 - 1649157
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||| || ||||||| |||||||| |||||||  | ||| |||| |   ||||||||| |||||||||| || || ||||||||||||||    
T  1649253 tagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgagctatg 1649157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 43635689 - 43635593
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||| ||   ||||| |||||||| |||||||| | ||| ||||   | | |||||||||||||||||||| ||||||||||||| ||||    
T  43635689 tagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgtttctgccaactgagttatg 43635593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 10474523 - 10474602
Alignment:
Q  179 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||| ||||||||||||||||| |  || ||||   | ||||||||||||||||| |||||||| |||||||| |||||    
T  10474523 aaggtgaataagtgaggtgtccgggggtcgaaccccgacccctgcatataacaatgtatgtctctaccaactgaactatg 10474602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 26734243 - 26734302
Alignment:
Q  140 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtc 199  Q
    ||||||||||||| |||  || |||||||||||||| ||||||| |||||||| ||||||    
T  26734243 ttttgtcagatagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtc 26734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 32309142 - 32309229
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaac 249  Q
    |||||||||| ||| | ||||| ||||| || |||||| ||||||| |||    | ||||||||||||||||||||||| ||||||||    
T  32309142 tagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatgcatgtccctgccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 38032905 - 38032956
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 269  Q
    ||||| ||||||||||||||||| |||||||||||| |||||  ||||||||    
T  38032905 ccctgtatataacaatgcatgtccctgccaactgagttatgttcacggggac 38032956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 41139165 - 41139091
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||||||| ||||||| ||||| ||||   | |||||||||||| |||||| |||| |||||||||||||||||    
T  41139165 aataagtgaagtgtccgggattcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatg 41139091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 19924810 - 19924773
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctat 257  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  19924810 ctgcatataataatgcatgtccctgccaactgagctat 19924773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 21285403 - 21285444
Alignment:
Q  218 ccctgcatataacaatgca-tgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  21285403 ccctgcatataacaatgcattgtccctgccaactgagctatg 21285444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 27726421 - 27726470
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 269  Q
    |||| ||||| |||||||||| ||||||||||||||||||  ||||||||    
T  27726421 ctgcttataataatgcatgtccctgccaactgagctatgttcacggggac 27726470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 32814905 - 32814832
Alignment:
Q  185 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||| |||||||| ||||| |||    | |||||||||||| |||||||||| || ||||||||||||||    
T  32814905 aataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccctaccaactgagctatg 32814832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 43209446 - 43209405
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatgt 259  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  43209446 ccctgcatataacaatgcatgttcctgccaactgagttatgt 43209405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 14772385 - 14772425
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| ||| ||||||||||||||||||||||||||| ||||    
T  14772385 ccctacatgtaacaatgcatgtctctgccaactgagttatg 14772425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 15222837 - 15222877
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||| ||| ||||||||||||||||||||||||||| ||||    
T  15222837 ccctacatgtaacaatgcatgtctctgccaactgagttatg 15222877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 20527479 - 20527519
Alignment:
Q  218 ccctgcatataacaatgca-tgtctctgccaactgagctat 257  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  20527479 ccctgcatataacaatgcattgtccctgccaactgagctat 20527519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 43712307 - 43712403
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||| ||||| ||||||   ||||||| ||| |||||| ||| ||||   | ||||| ||||||||||||||||| || ||||||||| ||||    
T  43712307 tagaattctcctttttcaaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtccctaccaactgagttatg 43712403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 45267977 - 45268033
Alignment:
Q  219 cctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatatg 275  Q
    ||||||||||| |||  |||||||||||||||||||||||   |||||||| |||||    
T  45267977 cctgcatataataatatatgtctctgccaactgagctatgctcacggggacaatatg 45268033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 4565 - 4525
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  4565 ccctgcatataacaatgcatgtccctgccaactgagctatg 4525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 4585 - 4545
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  4585 ccctgcatataacaatgcatgtccctgccaactgagctatg 4545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 34083 - 34123
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  34083 ccctgcatataacaatgcatgtccctgccaactgagctatg 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 21016 - 21070
Alignment:
Q  220 ctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatat 274  Q
    |||||||||||||||||||||| || ||||||||||||||  |||| ||||||||    
T  21016 ctgcatataacaatgcatgtctttgtcaactgagctatgttcacggagacgatat 21070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 25011 - 25051
Alignment:
Q  218 ccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  25011 ccctgcatataacattgcatgtctctgccaactgagatatg 25051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 1140 - 1044
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||||||| ||||||| |||||||| |||||| | | ||| ||||  |  |||| |||||||  ||||||||| || ||||||||||||||    
T  1140 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatg 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 67262 - 67166
Alignment:
Q  162 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 258  Q
    |||||||||| ||| ||||||| | |||||| |||||||  | ||| ||||  |  |||| ||||||||||||||| || || ||||||||||||||    
T  67262 tagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaaccccagcccctacatataacaatgcatatccctcccaactgagctatg 67166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University