View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13443_high_8 (Length: 373)

Name: NF13443_high_8
Description: NF13443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13443_high_8
NF13443_high_8
[»] chr1 (21 HSPs)
chr1 (102-373)||(41394332-41394609)
chr1 (105-324)||(20913143-20913367)
chr1 (102-324)||(20931455-20931682)
chr1 (102-324)||(20893551-20893779)
chr1 (102-324)||(20445789-20446019)
chr1 (102-324)||(20531554-20531783)
chr1 (102-324)||(37844374-37844604)
chr1 (102-212)||(45051533-45051643)
chr1 (102-215)||(2116365-2116478)
chr1 (102-205)||(22227919-22228022)
chr1 (102-205)||(22232616-22232719)
chr1 (108-215)||(18601146-18601253)
chr1 (108-215)||(5072416-5072523)
chr1 (124-250)||(51452624-51452755)
chr1 (292-363)||(21860334-21860406)
chr1 (292-363)||(44034831-44034903)
chr1 (307-363)||(41218743-41218800)
chr1 (258-363)||(27675086-27675190)
chr1 (130-205)||(17148704-17148781)
chr1 (1-30)||(41394230-41394259)
chr1 (292-325)||(45051726-45051759)
[»] chr2 (29 HSPs)
chr2 (102-324)||(462848-463075)
chr2 (106-363)||(20627198-20627462)
chr2 (102-361)||(19794591-19794857)
chr2 (105-324)||(36982364-36982591)
chr2 (107-363)||(43642841-43643105)
chr2 (102-324)||(8891352-8891581)
chr2 (102-324)||(24341309-24341542)
chr2 (103-250)||(25265390-25265542)
chr2 (102-205)||(7507894-7507997)
chr2 (108-250)||(17396653-17396799)
chr2 (124-250)||(19689401-19689532)
chr2 (124-250)||(23820203-23820334)
chr2 (124-250)||(14906440-14906571)
chr2 (124-250)||(20015143-20015274)
chr2 (228-324)||(22863169-22863267)
chr2 (108-215)||(19886689-19886796)
chr2 (292-363)||(22275045-22275117)
chr2 (292-363)||(22284278-22284350)
chr2 (293-363)||(15633538-15633609)
chr2 (130-205)||(3798645-3798722)
chr2 (130-205)||(12635910-12635987)
chr2 (130-205)||(12728529-12728606)
chr2 (158-218)||(19669130-19669191)
chr2 (292-325)||(19689314-19689347)
chr2 (130-205)||(34824612-34824689)
chr2 (292-324)||(9652796-9652828)
chr2 (292-324)||(14906354-14906386)
chr2 (292-324)||(23820388-23820420)
chr2 (155-218)||(24884848-24884912)
[»] chr4 (30 HSPs)
chr4 (102-324)||(121999-122226)
chr4 (102-361)||(54118130-54118397)
chr4 (102-324)||(13246540-13246769)
chr4 (102-324)||(15675009-15675242)
chr4 (102-324)||(10104170-10104403)
chr4 (102-218)||(31115739-31115855)
chr4 (108-250)||(13048221-13048368)
chr4 (124-250)||(26680332-26680463)
chr4 (108-215)||(10644336-10644443)
chr4 (124-250)||(10488694-10488825)
chr4 (124-250)||(16327926-16328057)
chr4 (108-215)||(47357771-47357878)
chr4 (183-324)||(33240891-33241043)
chr4 (102-215)||(40885594-40885707)
chr4 (292-363)||(25119067-25119139)
chr4 (217-324)||(31132544-31132657)
chr4 (292-363)||(5682388-5682460)
chr4 (130-205)||(22738406-22738483)
chr4 (130-203)||(17145701-17145776)
chr4 (102-215)||(7850109-7850223)
chr4 (130-205)||(7132107-7132184)
chr4 (130-205)||(8374645-8374722)
chr4 (130-205)||(18169107-18169184)
chr4 (130-205)||(19020623-19020700)
chr4 (292-324)||(14952085-14952117)
chr4 (292-324)||(15135907-15135939)
chr4 (292-324)||(15272211-15272243)
chr4 (292-324)||(16327840-16327872)
chr4 (292-324)||(16609013-16609045)
chr4 (292-324)||(26680517-26680549)
[»] scaffold0266 (2 HSPs)
scaffold0266 (102-324)||(3508-3735)
scaffold0266 (102-324)||(1234-1462)
[»] scaffold0023 (2 HSPs)
scaffold0023 (102-324)||(48708-48935)
scaffold0023 (108-215)||(36210-36317)
[»] chr7 (46 HSPs)
chr7 (106-363)||(3060080-3060343)
chr7 (102-324)||(16211876-16212103)
chr7 (102-324)||(13036938-13037167)
chr7 (102-324)||(11580661-11580892)
chr7 (102-324)||(36052774-36053003)
chr7 (102-250)||(47481031-47481184)
chr7 (102-235)||(18253850-18253988)
chr7 (106-215)||(16478990-16479099)
chr7 (107-215)||(2437573-2437681)
chr7 (108-215)||(13572793-13572900)
chr7 (108-215)||(10989526-10989633)
chr7 (124-250)||(11516359-11516490)
chr7 (108-215)||(13911052-13911159)
chr7 (124-250)||(15441564-15441695)
chr7 (124-250)||(30262129-30262260)
chr7 (109-250)||(25292338-25292484)
chr7 (124-250)||(7293148-7293279)
chr7 (102-249)||(13321125-13321278)
chr7 (102-322)||(295893-296119)
chr7 (292-363)||(32493906-32493978)
chr7 (292-363)||(126738-126810)
chr7 (292-356)||(1936884-1936949)
chr7 (292-363)||(111129-111201)
chr7 (155-218)||(16914949-16915013)
chr7 (293-363)||(7283916-7283987)
chr7 (155-205)||(48622708-48622758)
chr7 (130-205)||(13758507-13758584)
chr7 (131-218)||(14935497-14935586)
chr7 (131-218)||(15358934-15359023)
chr7 (131-218)||(15363090-15363179)
chr7 (130-205)||(15927705-15927782)
chr7 (130-205)||(15950833-15950910)
chr7 (130-205)||(18980063-18980140)
chr7 (131-218)||(28722247-28722336)
chr7 (292-324)||(2029244-2029276)
chr7 (292-324)||(7293333-7293365)
chr7 (155-218)||(9611470-9611534)
chr7 (155-218)||(9839041-9839105)
chr7 (292-324)||(11516544-11516576)
chr7 (292-324)||(14113903-14113935)
chr7 (140-218)||(14271920-14272000)
chr7 (292-324)||(15441478-15441510)
chr7 (255-324)||(15709428-15709501)
chr7 (292-324)||(30262043-30262075)
chr7 (292-324)||(42056188-42056220)
chr7 (155-218)||(48356806-48356870)
[»] scaffold0106 (1 HSPs)
scaffold0106 (102-324)||(41839-42066)
[»] chr8 (34 HSPs)
chr8 (105-324)||(16193643-16193866)
chr8 (102-363)||(16404860-16405128)
chr8 (102-324)||(24928716-24928944)
chr8 (102-324)||(43373392-43373621)
chr8 (102-215)||(6774286-6774399)
chr8 (102-215)||(24549092-24549205)
chr8 (108-215)||(21844600-21844707)
chr8 (108-215)||(21851993-21852100)
chr8 (124-250)||(5238219-5238350)
chr8 (124-250)||(22907214-22907345)
chr8 (124-250)||(24661248-24661379)
chr8 (124-250)||(43685678-43685809)
chr8 (102-215)||(17345679-17345792)
chr8 (108-215)||(30120839-30120946)
chr8 (108-215)||(16674420-16674527)
chr8 (292-363)||(274766-274838)
chr8 (292-363)||(641011-641083)
chr8 (292-363)||(826817-826889)
chr8 (292-363)||(24716722-24716794)
chr8 (108-180)||(222754-222826)
chr8 (108-180)||(736377-736449)
chr8 (108-180)||(860272-860344)
chr8 (124-180)||(691909-691965)
chr8 (155-218)||(26011656-26011720)
chr8 (292-363)||(39115598-39115670)
chr8 (130-205)||(13720970-13721047)
chr8 (130-205)||(16873093-16873170)
chr8 (130-205)||(22006300-22006377)
chr8 (292-324)||(5238404-5238436)
chr8 (155-218)||(15933460-15933524)
chr8 (292-324)||(22907128-22907160)
chr8 (292-324)||(24385652-24385684)
chr8 (292-324)||(24661162-24661194)
chr8 (292-324)||(43685863-43685895)
[»] chr3 (46 HSPs)
chr3 (102-324)||(2049920-2050147)
chr3 (124-373)||(16743991-16744246)
chr3 (102-324)||(12030073-12030300)
chr3 (102-324)||(13839004-13839232)
chr3 (102-324)||(14842487-14842714)
chr3 (102-260)||(51158008-51158171)
chr3 (102-287)||(15858986-15859177)
chr3 (106-235)||(15936642-15936776)
chr3 (190-363)||(19231979-19232161)
chr3 (102-211)||(15614944-15615053)
chr3 (106-218)||(15938506-15938618)
chr3 (124-250)||(17912483-17912613)
chr3 (223-324)||(19260749-19260850)
chr3 (108-250)||(13975722-13975868)
chr3 (108-250)||(45860922-45861068)
chr3 (108-215)||(55316336-55316443)
chr3 (124-250)||(2449238-2449369)
chr3 (108-215)||(16821256-16821363)
chr3 (108-215)||(41270192-41270299)
chr3 (108-250)||(13954890-13955036)
chr3 (289-363)||(15857123-15857198)
chr3 (292-363)||(3992873-3992945)
chr3 (292-363)||(55513193-55513265)
chr3 (292-363)||(2844514-2844586)
chr3 (292-363)||(54037984-54038056)
chr3 (292-346)||(17955861-17955916)
chr3 (292-363)||(7854305-7854377)
chr3 (292-352)||(45581954-45582016)
chr3 (106-205)||(54651571-54651671)
chr3 (131-218)||(4145835-4145923)
chr3 (131-218)||(6228646-6228735)
chr3 (130-205)||(12902132-12902209)
chr3 (292-325)||(15615137-15615170)
chr3 (130-205)||(18911130-18911207)
chr3 (130-205)||(25058876-25058953)
chr3 (130-205)||(49232573-49232650)
chr3 (292-324)||(2449152-2449184)
chr3 (136-205)||(5228456-5228527)
chr3 (292-324)||(16261777-16261809)
chr3 (292-324)||(16933869-16933901)
chr3 (292-324)||(17912398-17912430)
chr3 (292-324)||(23492696-23492728)
chr3 (155-218)||(34560061-34560125)
chr3 (292-324)||(38168237-38168269)
chr3 (155-218)||(47784787-47784851)
chr3 (292-324)||(53771365-53771397)
[»] scaffold0018 (1 HSPs)
scaffold0018 (109-322)||(51110-51328)
[»] scaffold0077 (2 HSPs)
scaffold0077 (102-325)||(36836-37066)
scaffold0077 (308-363)||(15327-15383)
[»] chr5 (31 HSPs)
chr5 (102-324)||(23507075-23507302)
chr5 (102-324)||(27182471-27182700)
chr5 (102-324)||(18530988-18531220)
chr5 (102-324)||(22053753-22053986)
chr5 (102-215)||(29188312-29188425)
chr5 (102-215)||(34939387-34939500)
chr5 (124-250)||(20623101-20623232)
chr5 (124-250)||(21233528-21233659)
chr5 (108-215)||(27009958-27010065)
chr5 (108-215)||(43443423-43443530)
chr5 (124-248)||(25900408-25900537)
chr5 (108-215)||(4200013-4200120)
chr5 (124-250)||(16536329-16536460)
chr5 (108-215)||(18778020-18778127)
chr5 (108-215)||(22366509-22366616)
chr5 (124-250)||(37052876-37053007)
chr5 (108-215)||(19500016-19500123)
chr5 (108-215)||(25426745-25426852)
chr5 (108-215)||(12491-12598)
chr5 (108-215)||(21073623-21073730)
chr5 (308-363)||(11584389-11584445)
chr5 (130-205)||(10778012-10778089)
chr5 (130-205)||(23514698-23514775)
chr5 (143-218)||(23981537-23981614)
chr5 (292-324)||(16105967-16105999)
chr5 (155-218)||(19862371-19862435)
chr5 (292-324)||(20623286-20623318)
chr5 (292-324)||(21233442-21233474)
chr5 (155-218)||(21310730-21310794)
chr5 (292-324)||(25900320-25900352)
chr5 (292-324)||(37053061-37053093)
[»] scaffold0195 (2 HSPs)
scaffold0195 (102-321)||(19316-19543)
scaffold0195 (102-250)||(21400-21553)
[»] scaffold0175 (1 HSPs)
scaffold0175 (102-324)||(882-1109)
[»] scaffold0162 (2 HSPs)
scaffold0162 (102-324)||(26340-26568)
scaffold0162 (103-250)||(8180-8332)
[»] scaffold0413 (1 HSPs)
scaffold0413 (102-324)||(5990-6217)
[»] scaffold0001 (2 HSPs)
scaffold0001 (102-324)||(172015-172242)
scaffold0001 (102-324)||(177718-177945)
[»] chr6 (27 HSPs)
chr6 (102-324)||(23153557-23153786)
chr6 (102-323)||(14626045-14626271)
chr6 (102-212)||(1650136-1650246)
chr6 (103-250)||(35009439-35009591)
chr6 (102-250)||(1657748-1657901)
chr6 (102-215)||(15862581-15862694)
chr6 (108-215)||(25175680-25175787)
chr6 (108-215)||(27654011-27654118)
chr6 (255-324)||(23148266-23148335)
chr6 (108-215)||(16825780-16825889)
chr6 (292-363)||(19983152-19983224)
chr6 (292-363)||(35015017-35015089)
chr6 (102-207)||(29665983-29666089)
chr6 (170-215)||(27751603-27751648)
chr6 (292-363)||(18583640-18583712)
chr6 (157-218)||(29605614-29605675)
chr6 (155-218)||(18629629-18629693)
chr6 (140-218)||(17083219-17083298)
chr6 (155-216)||(16887815-16887877)
chr6 (130-205)||(1556142-1556219)
chr6 (292-325)||(1650020-1650053)
chr6 (130-205)||(16232029-16232106)
chr6 (130-205)||(18086865-18086942)
chr6 (130-205)||(23977906-23977983)
chr6 (292-324)||(18002395-18002427)
chr6 (292-324)||(23995247-23995279)
chr6 (292-324)||(26090059-26090091)
[»] scaffold0218 (1 HSPs)
scaffold0218 (105-314)||(4996-5211)
[»] scaffold0008 (2 HSPs)
scaffold0008 (106-324)||(128095-128318)
scaffold0008 (108-215)||(31703-31810)
[»] scaffold0012 (2 HSPs)
scaffold0012 (102-324)||(247366-247595)
scaffold0012 (131-205)||(34200-34276)
[»] scaffold0498 (1 HSPs)
scaffold0498 (106-324)||(8992-9215)
[»] scaffold0009 (1 HSPs)
scaffold0009 (102-324)||(272135-272362)
[»] scaffold0302 (1 HSPs)
scaffold0302 (106-324)||(12227-12450)
[»] scaffold0028 (2 HSPs)
scaffold0028 (104-324)||(89378-89605)
scaffold0028 (217-324)||(107708-107817)
[»] scaffold0011 (1 HSPs)
scaffold0011 (102-324)||(123087-123317)
[»] scaffold0025 (4 HSPs)
scaffold0025 (102-276)||(148831-149012)
scaffold0025 (102-324)||(8959-9192)
scaffold0025 (224-324)||(146838-146938)
scaffold0025 (155-218)||(53508-53572)
[»] scaffold0049 (2 HSPs)
scaffold0049 (106-243)||(48301-48443)
scaffold0049 (293-363)||(20493-20564)
[»] scaffold0420 (1 HSPs)
scaffold0420 (102-215)||(13353-13466)
[»] scaffold0215 (2 HSPs)
scaffold0215 (102-215)||(9377-9490)
scaffold0215 (102-215)||(16275-16388)
[»] scaffold0125 (1 HSPs)
scaffold0125 (103-250)||(41759-41911)
[»] scaffold1542 (1 HSPs)
scaffold1542 (102-250)||(534-687)
[»] scaffold0026 (2 HSPs)
scaffold0026 (106-235)||(107861-107995)
scaffold0026 (108-198)||(64573-64663)
[»] scaffold0022 (1 HSPs)
scaffold0022 (104-205)||(5254-5355)
[»] scaffold0132 (2 HSPs)
scaffold0132 (103-250)||(13617-13769)
scaffold0132 (292-363)||(42677-42746)
[»] scaffold0529 (1 HSPs)
scaffold0529 (102-215)||(3073-3186)
[»] scaffold0772 (1 HSPs)
scaffold0772 (108-243)||(5645-5785)
[»] scaffold0369 (1 HSPs)
scaffold0369 (102-205)||(3832-3936)
[»] scaffold0116 (1 HSPs)
scaffold0116 (108-215)||(152-259)
[»] scaffold0076 (1 HSPs)
scaffold0076 (108-215)||(43114-43221)
[»] scaffold0139 (2 HSPs)
scaffold0139 (102-215)||(14089-14202)
scaffold0139 (102-215)||(21144-21257)
[»] scaffold0075 (1 HSPs)
scaffold0075 (102-215)||(34500-34613)
[»] scaffold1711 (1 HSPs)
scaffold1711 (108-215)||(1332-1439)
[»] scaffold0141 (4 HSPs)
scaffold0141 (124-250)||(26927-27058)
scaffold0141 (124-243)||(22672-22796)
scaffold0141 (292-324)||(22857-22889)
scaffold0141 (292-324)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (124-250)||(1582-1713)
scaffold0124 (292-324)||(1496-1528)
[»] scaffold0078 (3 HSPs)
scaffold0078 (124-250)||(37066-37197)
scaffold0078 (292-363)||(41632-41704)
scaffold0078 (292-324)||(36980-37012)
[»] scaffold0034 (1 HSPs)
scaffold0034 (292-363)||(80187-80259)
[»] scaffold0016 (2 HSPs)
scaffold0016 (291-363)||(162038-162111)
scaffold0016 (291-363)||(166124-166197)
[»] scaffold0686 (2 HSPs)
scaffold0686 (292-363)||(5737-5809)
scaffold0686 (292-363)||(5943-6015)
[»] scaffold0184 (1 HSPs)
scaffold0184 (292-363)||(31140-31212)
[»] scaffold0066 (2 HSPs)
scaffold0066 (106-205)||(45144-45244)
scaffold0066 (106-205)||(54530-54630)
[»] scaffold0342 (1 HSPs)
scaffold0342 (291-363)||(312-385)
[»] scaffold0361 (1 HSPs)
scaffold0361 (102-212)||(3299-3410)
[»] scaffold0084 (1 HSPs)
scaffold0084 (102-205)||(56149-56253)
[»] scaffold1164 (1 HSPs)
scaffold1164 (293-363)||(1701-1772)
[»] scaffold0122 (2 HSPs)
scaffold0122 (293-363)||(19810-19881)
scaffold0122 (293-363)||(24114-24185)
[»] scaffold0892 (1 HSPs)
scaffold0892 (130-203)||(3551-3625)
[»] scaffold0876 (1 HSPs)
scaffold0876 (293-362)||(94-164)
[»] scaffold0123 (1 HSPs)
scaffold0123 (155-218)||(8172-8236)
[»] scaffold0017 (1 HSPs)
scaffold0017 (130-205)||(54012-54088)
[»] scaffold0310 (1 HSPs)
scaffold0310 (293-363)||(6264-6335)
[»] scaffold0138 (1 HSPs)
scaffold0138 (155-216)||(22452-22514)
[»] scaffold0761 (1 HSPs)
scaffold0761 (130-205)||(1617-1694)
[»] scaffold0467 (1 HSPs)
scaffold0467 (130-205)||(10381-10458)
[»] scaffold0193 (1 HSPs)
scaffold0193 (131-218)||(4742-4831)
[»] scaffold0151 (1 HSPs)
scaffold0151 (143-218)||(22443-22520)
[»] scaffold0004 (1 HSPs)
scaffold0004 (292-325)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (292-324)||(6443-6475)
[»] scaffold0700 (1 HSPs)
scaffold0700 (155-218)||(2687-2751)
[»] scaffold0597 (1 HSPs)
scaffold0597 (292-324)||(878-910)
[»] scaffold0483 (1 HSPs)
scaffold0483 (155-218)||(6823-6887)
[»] scaffold0465 (1 HSPs)
scaffold0465 (292-324)||(9882-9914)
[»] scaffold0409 (2 HSPs)
scaffold0409 (140-218)||(1369-1449)
scaffold0409 (140-218)||(9624-9704)
[»] scaffold0251 (1 HSPs)
scaffold0251 (292-324)||(13285-13317)
[»] scaffold0058 (1 HSPs)
scaffold0058 (292-324)||(57392-57424)
[»] scaffold0053 (1 HSPs)
scaffold0053 (155-218)||(76868-76932)
[»] scaffold0032 (2 HSPs)
scaffold0032 (292-324)||(55904-55936)
scaffold0032 (292-324)||(108075-108107)


Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 102 - 373
Target Start/End: Original strand, 41394332 - 41394609
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |    
T  41394332 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaattta 41394431  T
Q  202 tgcatacaaacatatca-----gttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||||     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394432 tgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 41394531  T
Q  297 tatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcctttgcttctcc 373  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||    
T  41394532 tatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 105 - 324
Target Start/End: Original strand, 20913143 - 20913367
Alignment:
Q  105 gcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgc 204  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20913143 gcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgc 20913242  T
Q  205 atacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattat 299  Q
    ||||||||||||     ||||||||||||||||||| ||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| ||||||||     
T  20913243 atacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattac 20913342  T
Q  300 gacaaagactaacccccttacctta 324  Q
    || ||||||||||||||||||||||    
T  20913343 gataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 20931455 - 20931682
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20931455 ttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattca 20931554  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| ||||||    
T  20931555 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgat 20931654  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| |||| |||||||||||||||||    
T  20931655 tatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 20893779 - 20893551
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  20893779 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattca 20893680  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||| ||||||| ||||||| |||||| ||   ||||||||||||||||||||||| ||||||||||||||||    
T  20893679 tgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatg 20893581  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    |||||||  |||||||||||||||||||||    
T  20893580 attatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 20445789 - 20446019
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| | | || |||||||||||||||||||||||||| |||||||||||||||||||    
T  20445789 ttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 20445888  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaattt-acaaaatgatgat 293  Q
    |||||||||||||||     || |||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||| |||||||||||||    
T  20445889 tgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaaaatgatgat 20445988  T
Q  294 gattatgacaaagactaacccccttacctta 324  Q
    |||||||| |||||||||| |||||||||||    
T  20445989 gattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 20531554 - 20531783
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| | | || |||||||||||||||||||||||||| |||||||||||||||||||    
T  20531554 ttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 20531653  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     || |||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||| ||||||||||||||    
T  20531654 tgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatg 20531753  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    ||||||| |||||||||   ||||||||||    
T  20531754 attatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 37844604 - 37844374
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaactt-atcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattc 200  Q
    |||||||||||||  |||||| |||||||||||| | || ||||||| | | || |||||||||||||||||||||||||| ||||||||||||||||||    
T  37844604 ttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattc 37844505  T
Q  201 atgcatacaaacatatca-----gttggagcacgaatttatcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgat 293  Q
    ||||||||||||||||||     ||||||||| ||||||| ||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||    
T  37844504 atgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgat 37844405  T
Q  294 gattatgacaaagactaacccccttacctta 324  Q
    |||||||| ||||||||||||||||||||||    
T  37844404 gattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 45051533 - 45051643
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45051533 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 45051632  T
Q  202 tgcatacaaac 212  Q
    |||||||||||    
T  45051633 tgcatacaaac 45051643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 2116365 - 2116478
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2116365 ttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 2116464  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  2116465 tgcatacaaacata 2116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 22227919 - 22228022
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  22227919 ttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattca 22228018  T
Q  202 tgca 205  Q
    ||||    
T  22228019 tgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 22232616 - 22232719
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  22232616 ttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattca 22232715  T
Q  202 tgca 205  Q
    ||||    
T  22232716 tgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 18601253 - 18601146
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  18601253 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 18601154  T
Q  208 caaacata 215  Q
    ||||||||    
T  18601153 caaacata 18601146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 5072523 - 5072416
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  5072523 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 5072424  T
Q  208 caaacata 215  Q
     |||||||    
T  5072423 taaacata 5072416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 51452624 - 51452755
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  51452624 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 51452723  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    |||| |||||||||||| ||||||| ||||||    
T  51452724 gttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 21860334 - 21860406
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 21860406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 44034903 - 44034831
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 44034831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 41218743 - 41218800
Alignment:
Q  307 actaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||    
T  41218743 actaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 41218800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 27675086 - 27675190
Alignment:
Q  258 attcatacaacatttgaaaatttacaaaatgatgatgattatgacaaagactaacccccttaccttaattatctccaa-cattagctctagcttcacttt 356  Q
    |||||||||||| |||||||||||||  |  |  | |||||||| |||  ||||||||||||||||||||||||||||    |||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  357 agctcct 363  Q
    |||||||    
T  27675184 agctcct 27675190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 17148704 - 17148781
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  17148704 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 17148781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 41394230 - 41394259
Alignment:
Q  1 atccatgaatatgcatacccaatcagtgat 30  Q
    ||||||||||||||||||||||||||||||    
T  41394230 atccatgaatatgcatacccaatcagtgat 41394259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 45051726 - 45051759
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaa 325  Q
    |||||||||| |||||||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 462848 - 463075
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  462848 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 462947  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||| ||||     ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  462948 tgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 463047  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  463048 tatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 106 - 363
Target Start/End: Complemental strand, 20627462 - 20627198
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  20627462 caaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgca 20627363  T
Q  206 tacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattat 299  Q
    |||||||||||     ||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  20627362 tacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattat 20627263  T
Q  300 gacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    || ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20627262 gataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcct 20627198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 102 - 361
Target Start/End: Complemental strand, 19794857 - 19794591
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  19794857 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattca 19794758  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||| ||||||||||||| ||||||    
T  19794757 tgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaaaataatgatg 19794659  T
Q  295 attatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctc 361  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19794658 attatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctc 19794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 105 - 324
Target Start/End: Complemental strand, 36982591 - 36982364
Alignment:
Q  105 gcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgc 204  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  36982591 gcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatga 36982492  T
Q  205 atacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgat 296  Q
    ||||||||||||     ||||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||    
T  36982491 atacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgat 36982392  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  36982391 tatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 107 - 363
Target Start/End: Complemental strand, 43643105 - 43642841
Alignment:
Q  107 aaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcat 206  Q
    |||||||||||||||| |||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43643105 aaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcat 43643006  T
Q  207 acaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattat 299  Q
    ||||||||||     || ||||||||| |||||| ||||||| |||||  ||   ||||||||||||||||||||||||| |||||||||||||||||||    
T  43643005 acaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattat 43642906  T
Q  300 gacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    || ||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  43642905 gataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcct 43642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 8891352 - 8891581
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  8891352 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattca 8891451  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  8891452 tgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 8891551  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    ||||||| ||||||||||||| ||||||||    
T  8891552 attatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 24341542 - 24341309
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  24341542 ttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattca 24341443  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgat 290  Q
    |||||||||||||||     |||||| |||| ||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||    
T  24341442 tgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgat 24341343  T
Q  291 gatgattatgacaaagactaacccccttacctta 324  Q
    |||||||||||  |||||||||||||||||||||    
T  24341342 gatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 25265542 - 25265390
Alignment:
Q  103 tagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcat 202  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25265542 tagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 25265443  T
Q  203 gcatacaaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||| |     |||| ||||||||||||| ||||||| ||||||    
T  25265442 gcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 7507997 - 7507894
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7507997 ttagccaaattcaccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 7507898  T
Q  202 tgca 205  Q
    ||||    
T  7507897 tgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 17396799 - 17396653
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  17396799 aaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcata 17396700  T
Q  208 caaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    | ||||||||     |||||||||||||||||| ||||||| ||||||    
T  17396699 c-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 19689532 - 19689401
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  19689532 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 19689433  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  19689432 gttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 23820203 - 23820334
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  23820203 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 23820302  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  23820303 gttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 14906571 - 14906440
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  14906571 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 14906472  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  14906471 gttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 20015143 - 20015274
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||  |||||||| |||||||||||||| ||||||||||     |    
T  20015143 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaa 20015242  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  20015243 gttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 228 - 324
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  228 cgaatttatcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgacaaagactaacccccttacctta 324  Q
    |||||||| ||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 19886796 - 19886689
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    |||||||||| || | |||||| |||| ||||||||| |||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  19886796 aaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 19886697  T
Q  208 caaacata 215  Q
    ||||||||    
T  19886696 caaacata 19886689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 22275045 - 22275117
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 22275117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 22284278 - 22284350
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 22284350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 15633538 - 15633609
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcct 15633609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 3798722 - 3798645
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  3798722 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 3798645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 12635987 - 12635910
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  12635987 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 12635910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 12728529 - 12728606
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  12728529 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 12728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 19669191 - 19669130
Alignment:
Q  158 gaacatgtaatttcaccaacaatcttacaattatcatcaatt-catgcatacaaacatatca 218  Q
    ||||||| ||||||||||||||     ||||||||||||||| |||||||||||||||||||    
T  19669191 gaacatgcaatttcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatca 19669130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaa 325  Q
    |||||||||| |||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 34824612 - 34824689
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  34824612 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 34824689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 24884848 - 24884912
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaatt-catgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||||| ||||||| |||||||||||    
T  24884848 tttgaacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatatca 24884912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 4e-97; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 121999 - 122226
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  121999 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 122098  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     |||||||||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  122099 tgcatacaaacatatcatcacagttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 122198  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||| ||||||||||||    
T  122199 tatgataaagactaatccccttacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 102 - 361
Target Start/End: Complemental strand, 54118397 - 54118130
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || | | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54118397 ttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 54118298  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     || |||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||| ||||||| ||||||    
T  54118297 tgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatg 54118198  T
Q  295 attatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctc 361  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  54118197 attatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctc 54118130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 13246540 - 13246769
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  13246540 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattca 13246639  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     |||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  13246640 tgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 13246739  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    ||||||| ||||||||||||||||||||||    
T  13246740 attatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 15675242 - 15675009
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  15675242 ttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 15675143  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgat 290  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||    
T  15675142 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgat 15675043  T
Q  291 gatgattatgacaaagactaacccccttacctta 324  Q
    |||||||||||  |||||||||||||||||||||    
T  15675042 gatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 10104403 - 10104170
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  10104403 ttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 10104304  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgat 290  Q
    |||||||||||||||     ||||||||||||| ||||| ||||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    |||||    
T  10104303 tgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgat 10104204  T
Q  291 gatgattatgacaaagactaacccccttacctta 324  Q
    |||||||||||  |||||||||||||||||||||    
T  10104203 gatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 31115739 - 31115855
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||| |||||||||||||||| || ||||||||||||||  |||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  31115739 ttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattca 31115838  T
Q  202 tgcatacaaacatatca 218  Q
    |||||||||||||||||    
T  31115839 tgcatacaaacatatca 31115855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 13048368 - 13048221
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||| ||||||| |||||| |||| |||||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  208 caaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||     |||||||||| ||||||| ||||||| ||||||    
T  13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 26680332 - 26680463
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  26680332 cacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 26680431  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  26680432 gttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 10644336 - 10644443
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | ||||||  ||| |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10644336 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcata 10644435  T
Q  208 caaacata 215  Q
    ||||||||    
T  10644436 caaacata 10644443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 10488694 - 10488825
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  10488694 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 10488793  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  10488794 gttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 16328057 - 16327926
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  16328057 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 16327958  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  16327957 gttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 47357771 - 47357878
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || ||||||| ||||||||    
T  47357771 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcata 47357870  T
Q  208 caaacata 215  Q
    ||||||||    
T  47357871 caaacata 47357878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 183 - 324
Target Start/End: Original strand, 33240891 - 33241043
Alignment:
Q  183 tacaattatcatcaattcatgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatcca--taatcaaaattcatacaacatttgaa 275  Q
    |||||| |||||||||||||||||||||||||||     ||||||||||||||||||| ||||||| |||||  ||   ||||||||||| |||||||||    
T  33240891 tacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaa 33240990  T
Q  276 aatttacaaa----atgatgatgattatgacaaagactaacccccttacctta 324  Q
    || || ||||    ||||||||||||||||  |||||||||||||||||||||    
T  33240991 aaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 40885707 - 40885594
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacata-tttgaacatgtaatttcaccaacaatcttacaattatcatcaattc 200  Q
    |||||||| |||||||||||| || ||||| || |||||  ||||| |||||| ||||||||||||||||||||||||| | | ||||||||| ||||||    
T  40885707 ttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattc 40885609  T
Q  201 atgcatacaaacata 215  Q
    |||||||||||||||    
T  40885608 atgcatacaaacata 40885594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 25119139 - 25119067
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcct 25119067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 31132544 - 31132657
Alignment:
Q  217 cagttggagcacgaatttatcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgacaaagacta 310  Q
    ||||||||||||||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||  |||||||    
T  31132544 cagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagacta 31132643  T
Q  311 acccccttacctta 324  Q
    ||||||||||||||    
T  31132644 acccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 5682460 - 5682388
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||| ||||||||||||||| ||||| ||||||||  |||||||||| ||||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcct 5682388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 22738406 - 22738483
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    |||||||||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  22738406 tttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 22738483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 17145776 - 17145701
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatg 203  Q
    |||||||||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||    
T  17145776 tttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatg 17145701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 7850109 - 7850223
Alignment:
Q  102 ttagcaaaatt-caccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattc 200  Q
    ||||||||||| || || |||| ||||||||||| |||||  |||||| ||||| ||| ||||  |||| |||||||||||  ||| || |||||||| |    
T  7850109 ttagcaaaatttcatcacttgagcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaatac 7850208  T
Q  201 atgcatacaaacata 215  Q
    || ||| ||||||||    
T  7850209 attcattcaaacata 7850223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 7132184 - 7132107
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  7132184 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 7132107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 8374645 - 8374722
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  8374645 tttcataacttaacatttatacatactttgaagcatgtaatttcacccacaaacataccataatcatcaattcatgca 8374722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 18169107 - 18169184
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  18169107 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18169184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 19020623 - 19020700
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  19020623 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 19020700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 3735 - 3508
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3735 ttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 3636  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  3635 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgat 3536  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||    
T  3535 tatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 1234 - 1462
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  1234 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattca 1333  T
Q  202 tgcatacaaacatatc-----agttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatga 295  Q
    ||||||| ||||||||     |||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  1334 tgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatga 1433  T
Q  296 ttatgacaaagactaacccccttacctta 324  Q
    |||||| ||||||||||||||||||||||    
T  1434 ttatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 48708 - 48935
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48708 ttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 48807  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48808 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 48907  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  48908 tatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 36210 - 36317
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| |||| |||||||||||||||||||| ||||| || ||||||||||| ||||    
T  36210 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacata 36309  T
Q  208 caaacata 215  Q
    ||||||||    
T  36310 caaacata 36317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 106 - 363
Target Start/End: Original strand, 3060080 - 3060343
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    |||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  3060080 caaaattcaccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgca 3060179  T
Q  206 tacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatg 300  Q
    |||||| ||||     ||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  3060180 tacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatg 3060279  T
Q  301 acaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    | ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  3060280 ataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctcct 3060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 16211876 - 16212103
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  16211876 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattca 16211975  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  16211976 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgat 16212075  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  16212076 tatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 13037167 - 13036938
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | |||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  13037167 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattca 13037068  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  13037067 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 13036968  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    ||||||   |||||||||||||||||||||    
T  13036967 attatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 11580892 - 11580661
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11580892 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 11580793  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaatgatga 292  Q
    |||||||||||||||     ||||||||||||||||||| ||| ||| |||||| ||    |||||||||||||||||||||||||||| ||||||||||    
T  11580792 tgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatga 11580693  T
Q  293 tgattatgacaaagactaacccccttacctta 324  Q
    ||||||||| ||||||||| ||||||||||||    
T  11580692 tgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 36052774 - 36053003
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  36052774 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattca 36052873  T
Q  202 tgcatacaaacatatca-----gttggagcacgaatttatcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    ||||||||||| |||||     ||||||| |  |||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||    
T  36052874 tgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatg 36052973  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    ||||||| ||||||||||||||||||||||    
T  36052974 attatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 47481184 - 47481031
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  47481184 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattca 47481085  T
Q  202 tgcatacaaacata-----tcagttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||      ||||| ||||||||||||| ||||||| ||||||    
T  47481084 tgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 18253988 - 18253850
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  18253988 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 18253889  T
Q  202 tgcatacaaacatat-----cagttggagcacgaattta 235  Q
    |||||||||||||||     |||||||||||||||||||    
T  18253888 tgcatacaaacatatcattacagttggagcacgaattta 18253850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 16479099 - 16478990
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16479099 caaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 16479000  T
Q  206 tacaaacata 215  Q
    ||||||||||    
T  16478999 tacaaacata 16478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 2437573 - 2437681
Alignment:
Q  107 aaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcat 206  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||    
T  2437573 aaaattcaccaattgaacacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcat 2437672  T
Q  207 acaaacata 215  Q
    |||||||||    
T  2437673 acaaacata 2437681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 13572793 - 13572900
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  13572793 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcata 13572892  T
Q  208 caaacata 215  Q
    ||||||||    
T  13572893 caaacata 13572900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 10989526 - 10989633
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  10989526 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 10989625  T
Q  208 caaacata 215  Q
    ||||||||    
T  10989626 caaacata 10989633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 11516359 - 11516490
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  11516359 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 11516458  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  11516459 gttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 13911159 - 13911052
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| || ||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  13911159 aaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcata 13911060  T
Q  208 caaacata 215  Q
    ||||||||    
T  13911059 caaacata 13911052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 15441695 - 15441564
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  15441695 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 15441596  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  15441595 gttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 30262260 - 30262129
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  30262260 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 30262161  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  30262160 gttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 250
Target Start/End: Complemental strand, 25292484 - 25292338
Alignment:
Q  109 aattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac 208  Q
    |||||||||||||| |||||| |||| | |||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||| |||||    
T  25292484 aattcaccaattgagcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatac 25292385  T
Q  209 aaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    |||||||||     ||||||||||| |||||| ||||||| ||||||    
T  25292384 aaacatatcatcaaagttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 7293148 - 7293279
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| || ||||||||||||||||||||||     |    
T  7293148 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaa 7293247  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  7293248 gttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 249
Target Start/End: Original strand, 13321125 - 13321278
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaatt 199  Q
    ||||||||||||||||||||| |||||||| || |||||  ||||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  13321125 ttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaatt 13321223  T
Q  200 catgcatacaaacata-----tcagttggagcacgaatttatcaacaatcatcca 249  Q
    ||||||||||||||||      ||||| ||||||||||||| ||||||| |||||    
T  13321224 catgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 322
Target Start/End: Complemental strand, 296119 - 295893
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||||||||| ||| | | |||||| | ||||| ||||||||||||| || |||||| |||||||||||||||| ||  ||||||||| |||||    
T  296119 ttagcaaaattcaccatttggatataatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattca 296020  T
Q  202 tgcatacaaacata-----tcagttggagcacgaatttatcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||| |||||||||     ||| || || |||||||||| ||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||      
T  296019 tgcacacaaacataacacctcaattagaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgaga 295921  T
Q  295 attatgacaaagactaacccccttacct 322  Q
    ||||||   ||||| |||||||||||||    
T  295920 attatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 32493978 - 32493906
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 32493906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 126738 - 126810
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcct 126810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 1936949 - 1936884
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcacttt 356  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttt 1936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 111201 - 111129
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||  || |||||||||||||||||||||||| |||||  ||||||| ||||||||||| ||||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcct 111129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 16915013 - 16914949
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||||||| ||||||||| |||||||||||    
T  16915013 tttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatca 16914949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 7283987 - 7283916
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaa-cattagctctagcttcactttagctcct 363  Q
    |||||||||  || |||||||||||||||||||||||| ||||  |||| ||| ||||||||||| ||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcct 7283916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 48622758 - 48622708
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    |||||||||||||||||||| |||| | ||| || ||||||||||||||||    
T  48622758 tttgaacatgtaatttcacccacaaacataccataatcatcaattcatgca 48622708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 13758507 - 13758584
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  13758507 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 13758584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 14935497 - 14935586
Alignment:
Q  131 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  14935497 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 14935586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 15358934 - 15359023
Alignment:
Q  131 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  15358934 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 15359023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 15363090 - 15363179
Alignment:
Q  131 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  15363090 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 15363179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 15927705 - 15927782
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  15927705 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaagcataccataatcatcaattcatgca 15927782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 15950910 - 15950833
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  15950910 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 15950833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 18980140 - 18980063
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  18980140 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18980063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 28722247 - 28722336
Alignment:
Q  131 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  28722247 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 28722336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 9611470 - 9611534
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  9611470 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 9611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 9839041 - 9839105
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  9839041 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 9839105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 14272000 - 14271920
Alignment:
Q  140 tatcatttttacata-tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    ||||||||| ||||| |||||||||| ||||||||||||||   |  |||||||| ||| ||||||||| |||||||||||    
T  14272000 tatcattttcacatactttgaacatgcaatttcaccaacaacaattgaattatcaacaatttcatgcattcaaacatatca 14271920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  255 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgacaaagactaacccccttacctta 324  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||  |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 48356806 - 48356870
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  48356806 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 48356870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 41839 - 42066
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  41839 ttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattca 41938  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41939 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 42038  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| |||||| |||||||||||||||    
T  42039 tatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 105 - 324
Target Start/End: Complemental strand, 16193866 - 16193643
Alignment:
Q  105 gcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgc 204  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16193866 gcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgc 16193767  T
Q  205 atacaaacatatc-----agttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattat 299  Q
    |||||||||||||     |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  16193766 atacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattat 16193667  T
Q  300 gacaaagactaacccccttacctta 324  Q
    || ||||||||| ||||||||||||    
T  16193666 gataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 102 - 363
Target Start/End: Complemental strand, 16405128 - 16404860
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16405128 ttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 16405029  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||||||||||| ||| ||| |||||| ||   |||||||||||||||||||||||||||| |||| ||||||    
T  16405028 tgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatg 16404930  T
Q  295 attatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  16404929 attatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 16404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 24928944 - 24928716
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24928944 ttagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 24928845  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatga 295  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  24928844 tgcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatga 24928745  T
Q  296 ttatgacaaagactaacccccttacctta 324  Q
    |||||| ||||||||||||| ||||||||    
T  24928744 ttatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 43373621 - 43373392
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  43373621 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattca 43373522  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    ||||||||||| |||     ||||||||||||||||||| ||  ||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||    
T  43373521 tgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatg 43373422  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    ||||||| ||||||||||||||||||||||    
T  43373421 attatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 6774399 - 6774286
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6774399 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 6774300  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  6774299 tgcatacaaacata 6774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 24549092 - 24549205
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24549092 ttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 24549191  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  24549192 tgcatacaaacata 24549205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 21844707 - 21844600
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21844707 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcata 21844608  T
Q  208 caaacata 215  Q
    ||||||||    
T  21844607 caaacata 21844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 21852100 - 21851993
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  21852100 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcata 21852001  T
Q  208 caaacata 215  Q
    ||||||||    
T  21852000 caaacata 21851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 5238219 - 5238350
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  5238219 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 5238318  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  5238319 gttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 22907345 - 22907214
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  22907345 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 22907246  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  22907245 gttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 24661379 - 24661248
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  24661379 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 24661280  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  24661279 gttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 43685678 - 43685809
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  43685678 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 43685777  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  43685778 gttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 17345679 - 17345792
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||| || ||||||| ||||||||||| |||||  |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  17345679 ttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 17345778  T
Q  202 tgcatacaaacata 215  Q
    |||||| |||||||    
T  17345779 tgcatataaacata 17345792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 30120839 - 30120946
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||| ||||||||||||    
T  30120839 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcata 30120938  T
Q  208 caaacata 215  Q
    ||||||||    
T  30120939 caaacata 30120946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 16674527 - 16674420
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||| ||||||||||||    
T  16674527 aaattcaccaattaagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcata 16674428  T
Q  208 caaacata 215  Q
     |||||||    
T  16674427 aaaacata 16674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 274766 - 274838
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 274838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 641083 - 641011
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 641011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 826889 - 826817
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 24716794 - 24716722
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcct 24716722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 222826 - 222754
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 180  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  222826 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 736449 - 736377
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 180  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  736449 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 860344 - 860272
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 180  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  860344 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 691965 - 691909
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 180  Q
    |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  691965 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 26011656 - 26011720
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||||||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  26011656 tttgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 26011720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 39115598 - 39115670
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||  || |||||| ||||||||||||||||  ||||| |||||||| ||||||||||| ||||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcct 39115670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 13721047 - 13720970
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  13721047 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 13720970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 16873170 - 16873093
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  16873170 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 16873093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 22006377 - 22006300
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  22006377 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 22006300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 15933460 - 15933524
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  15933460 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 15933524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 1e-87; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 2049920 - 2050147
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2049920 ttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 2050019  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
     ||||||||||||||     ||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||    
T  2050020 ggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgat 2050119  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  2050120 tatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 124 - 373
Target Start/End: Complemental strand, 16744246 - 16743991
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatca----- 218  Q
    ||||||||||| ||||| |||||||||||||||| || ||||||||| |||||||||| |||| |||| ||||||||||| ||||||||||||||         
T  16744246 cacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaa 16744147  T
Q  219 gttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgacaaagactaaccccctt 318  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||    
T  16744146 gttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgtt 16744047  T
Q  319 accttaattatctccaac-attagctctagcttcactttagctcctttgcttctcc 373  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||    
T  16744046 accttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 12030300 - 12030073
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12030300 ttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 12030201  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  12030200 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgat 12030101  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| || || ||||||||||||||||    
T  12030100 tatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 13839004 - 13839232
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  13839004 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattca 13839103  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatga 295  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13839104 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatga 13839203  T
Q  296 ttatgacaaagactaacccccttacctta 324  Q
    ||||||  |||||||||||||||||||||    
T  13839204 ttatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 14842714 - 14842487
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  14842714 ttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattca 14842615  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||||    
T  14842614 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgat 14842515  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  14842514 tatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 102 - 260
Target Start/End: Complemental strand, 51158171 - 51158008
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51158171 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 51158072  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaatt 260  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||||| |||||||    
T  51158071 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 287
Target Start/End: Complemental strand, 15859177 - 15858986
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15859177 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 15859078  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaat 287  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||| ||   ||||||||||||||| ||| |||||||||||||    
T  15859077 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 15936776 - 15936642
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15936776 caaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 15936677  T
Q  206 tacaaacatat-----cagttggagcacgaattta 235  Q
    |||||||||||     |||||||||||||||||||    
T  15936676 tacaaacatatcattacagttggagcacgaattta 15936642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 190 - 363
Target Start/End: Original strand, 19231979 - 19232161
Alignment:
Q  190 atcatcaattcatgcatacaaacatatca-----gttggagcacgaatttatcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-a 281  Q
    |||||||||||||| ||| ||||||||||     ||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||| |    
T  19231979 atcatcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttca 19232078  T
Q  282 caaaatgatgatgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  19232079 caaaatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 19232161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 15614944 - 15615053
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15614944 ttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattca 15615043  T
Q  202 tgcatacaaa 211  Q
    ||||||||||    
T  15615044 tgcatacaaa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 15938618 - 15938506
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||      
T  15938618 caaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgat 15938519  T
Q  206 tacaaacatatca 218  Q
    |||||||||||||    
T  15938518 tacaaacatatca 15938506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 17912613 - 17912483
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc----ag 219  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||    
T  17912613 cacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaag 17912514  T
Q  220 ttggagcacgaatttatcaacaatcatccat 250  Q
    |||||||||||||||| ||||||| ||||||    
T  17912513 ttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 19260850 - 19260749
Alignment:
Q  223 gagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgacaaagactaacccccttacct 322  Q
    ||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19260850 gagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgataaagactaacccccttacct 19260751  T
Q  323 ta 324  Q
    ||    
T  19260750 ta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 13975868 - 13975722
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||||| ||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||||    
T  13975868 aaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13975769  T
Q  208 caaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    | ||||||||     |||||||||||||||||| ||||||| ||||||    
T  13975768 c-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 45860922 - 45861068
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||||| ||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||||    
T  45860922 aaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 45861021  T
Q  208 caaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    | ||||||||     |||||||||||||||||| ||||||| ||||||    
T  45861022 c-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 55316336 - 55316443
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  55316336 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 55316435  T
Q  208 caaacata 215  Q
    ||||||||    
T  55316436 caaacata 55316443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 2449369 - 2449238
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  2449369 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 2449270  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  2449269 gttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 16821256 - 16821363
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | ||||||  ||| | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  16821256 aaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcata 16821355  T
Q  208 caaacata 215  Q
    ||||||||    
T  16821356 caaacata 16821363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 41270192 - 41270299
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||| ||||||||||| ||||| || ||||||||||||||||    
T  41270192 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcata 41270291  T
Q  208 caaacata 215  Q
    ||||||||    
T  41270292 caaacata 41270299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 13955036 - 13954890
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||| ||||||| |||||| |||| |||| ||||||||||| ||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  208 caaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    | ||||||||     |||||||||||||||||| ||||||| ||||||    
T  13954936 c-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 15857198 - 15857123
Alignment:
Q  289 atgatgattatgacaaagactaacccccttaccttaattatctccaa-cattagctctagcttcactttagctcct 363  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcct 15857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 3992873 - 3992945
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 3992945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 55513193 - 55513265
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 55513265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 2844514 - 2844586
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcct 2844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 54038056 - 54037984
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 54037984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 17955916 - 17955861
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctcta 346  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctcta 17955861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 7854305 - 7854377
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||  || |||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 7854377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  292 atgattatgacaaagactaacccc-cttaccttaattatctccaac-attagctctagcttca 352  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 54651571 - 54651671
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacata-tttg-aacatgtaatttcaccaacaatcttacaattatcatcaattcatg 203  Q
    |||||||||||||||||  | ||||| || |||||| ||||| |||||| |||| |||||| ||||||||  |||||| |||||||||||||||||||||    
T  54651571 caaaattcaccaattgagtataattt-cataacttaacatttatacatactttgcaacatgcaatttcactcacaatcatacaattatcatcaattcatg 54651669  T
Q  204 ca 205  Q
    ||    
T  54651670 ca 54651671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 4145923 - 4145835
Alignment:
Q  131 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatca 218  Q
    |||||||  ||||||||| ||||| | |||||||||||||||| ||||||   | ||||||||| ||||||||| || |||||||||||    
T  4145923 ttcacaatatatcattttcacatactatgaacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatca 4145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 6228735 - 6228646
Alignment:
Q  131 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||  ||||||||| ||||| | |||||||||||||||||||||||   | ||||||||| ||| |||||| || |||||||||||    
T  6228735 ttcacaatatatcattttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatca 6228646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 12902209 - 12902132
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  12902209 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 12902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 15615137 - 15615170
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaa 325  Q
    |||||||||| |||||||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 18911130 - 18911207
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  18911130 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18911207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 25058876 - 25058953
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  25058876 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 25058953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 49232573 - 49232650
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  49232573 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 49232650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 5228456 - 5228527
Alignment:
Q  136 aacttatcatttttacatatttg--aacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    |||||| ||||| |||||||||   |||||||||||||||| |||| | ||| || ||||||||||||||||    
T  5228456 aacttaacatttatacatattttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 5228527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 34560061 - 34560125
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  34560061 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 34560125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 47784851 - 47784787
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  47784851 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatca 47784787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 109 - 322
Target Start/End: Complemental strand, 51328 - 51110
Alignment:
Q  109 aattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac 208  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51328 aattcaccaattgagcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac 51229  T
Q  209 aaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgaca 303  Q
    ||| ||||     ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  51228 aaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 51129  T
Q  304 aagactaacccccttacct 322  Q
    |||||||| | ||||||||    
T  51128 aagactaatctccttacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 102 - 325
Target Start/End: Complemental strand, 37066 - 36836
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37066 ttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattca 36967  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||    
T  36966 tgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatg 36867  T
Q  295 attatgacaaagactaacccccttaccttaa 325  Q
    ||||||| |||||||||||||||||||||||    
T  36866 attatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 15383 - 15327
Alignment:
Q  308 ctaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||||    
T  15383 ctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcct 15327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 3e-85; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 23507075 - 23507302
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23507075 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 23507174  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||  ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||||||  ||||||    
T  23507175 tgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgat 23507274  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  23507275 tatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 27182700 - 27182471
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | |||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  27182700 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttca 27182601  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||| ||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  27182600 tgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 27182501  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    |||||||  |||||||||||||||||||||    
T  27182500 attatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 18531220 - 18530988
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  18531220 ttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 18531121  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgat- 293  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||| || || ||| |||||||| ||||||||||| || ||||||||||||     
T  18531120 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatg 18531021  T
Q  294 --gattatgacaaagactaacccccttacctta 324  Q
      ||||||||  |||||||||||||||||||||    
T  18531020 acgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 22053986 - 22053753
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  22053986 ttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattca 22053887  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgat 290  Q
    | |||||||||||||     ||||||||||||||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||    
T  22053886 tacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgat 22053787  T
Q  291 gatgattatgacaaagactaacccccttacctta 324  Q
    |||||||||||  |||||||||||||||||||||    
T  22053786 gatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 29188425 - 29188312
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29188425 ttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 29188326  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  29188325 tgcatacaaacata 29188312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 34939387 - 34939500
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||| || ||||||| ||||||||||| |||||  |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  34939387 ttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 34939486  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  34939487 tgcatacaaacata 34939500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 20623101 - 20623232
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  20623101 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 20623200  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  20623201 gttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 21233659 - 21233528
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  21233659 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 21233560  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  21233559 gttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 27009958 - 27010065
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    |||||||||||||||  ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| || |||||| ||||||||||||||||||    
T  27009958 aaattcaccaattgagtacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcata 27010057  T
Q  208 caaacata 215  Q
    ||||||||    
T  27010058 caaacata 27010065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 43443530 - 43443423
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  43443530 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 43443431  T
Q  208 caaacata 215  Q
    ||||||||    
T  43443430 caaacata 43443423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 124 - 248
Target Start/End: Complemental strand, 25900537 - 25900408
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||     |    
T  25900537 cacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaa 25900438  T
Q  219 gttggagcacgaatttatcaacaatcatcc 248  Q
    ||||||||||||||||| ||||||| ||||    
T  25900437 gttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 4200120 - 4200013
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | || ||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  4200120 aaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 4200021  T
Q  208 caaacata 215  Q
    ||||||||    
T  4200020 caaacata 4200013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 16536329 - 16536460
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| || ||||||||||||||||||||||     |    
T  16536329 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaa 16536428  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  16536429 gttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 18778127 - 18778020
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  18778127 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 18778028  T
Q  208 caaacata 215  Q
    ||||||||    
T  18778027 caaacata 18778020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 22366616 - 22366509
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  22366616 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 22366517  T
Q  208 caaacata 215  Q
    ||||||||    
T  22366516 caaacata 22366509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 37052876 - 37053007
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||  |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  37052876 cacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 37052975  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  37052976 gttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 19500016 - 19500123
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    |||||||||| || | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  19500016 aaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 19500115  T
Q  208 caaacata 215  Q
    ||||||||    
T  19500116 caaacata 19500123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 25426745 - 25426852
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    |||||||||| || | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  25426745 aaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25426844  T
Q  208 caaacata 215  Q
    ||||||||    
T  25426845 caaacata 25426852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 12491 - 12598
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    |||||||||| || | |||||| |||| ||||||||| |||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  12491 aaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 12590  T
Q  208 caaacata 215  Q
    ||||||||    
T  12591 caaacata 12598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 21073730 - 21073623
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    |||||||||| || | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||| |||||||||||    
T  21073730 aaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcata 21073631  T
Q  208 caaacata 215  Q
    ||||||||    
T  21073630 caaacata 21073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 11584389 - 11584445
Alignment:
Q  308 ctaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||||||||||| ||||||    
T  11584389 ctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 11584445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 10778089 - 10778012
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  10778089 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 10778012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 23514698 - 23514775
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  23514698 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 23514775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 23981614 - 23981537
Alignment:
Q  143 catttttacata-tttgaacatgtaatttcaccaacaatcttacaattatcatcaatt-catgcatacaaacatatca 218  Q
    ||||| |||||| |||||||||| || |||||||||||   | ||||||||| ||||| |||||||||||||||||||    
T  23981614 catttatacatactttgaacatgcaaattcaccaacaacaattcaattatcaccaatttcatgcatacaaacatatca 23981537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 19862371 - 19862435
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  19862371 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatca 19862435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 21310794 - 21310730
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  21310794 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 21310730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 102 - 321
Target Start/End: Original strand, 19316 - 19543
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19316 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 19415  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgat 293  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||    
T  19416 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgat 19515  T
Q  294 gattatgacaaagactaacccccttacc 321  Q
    ||||||||  ||||||||||||||||||    
T  19516 gattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 21400 - 21553
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21400 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 21499  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccat 250  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| ||||||    
T  21500 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 156; Significance: 8e-83; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 1109 - 882
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1109 ttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 1010  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| ||||||    
T  1009 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgat 910  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  909 tatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 26568 - 26340
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26568 ttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattca 26469  T
Q  202 tgcatacaaacatatc-----agttggagcacgaatttatcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatga 295  Q
     |||||||||||||||     |||||||||||||||||| ||||||| || ||| ||  |||||||||||||||||||||||||||||||||||| ||||    
T  26468 cgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatga 26369  T
Q  296 ttatgacaaagactaacccccttacctta 324  Q
    |||||| ||||||||||||||||||||||    
T  26368 ttatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 8332 - 8180
Alignment:
Q  103 tagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcat 202  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  8332 tagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcat 8233  T
Q  203 gcatacaaacata-----tcagttggagcacgaatttatcaacaatcatccat 250  Q
    |||||||||||||      ||||| ||||||||||||| ||||||| ||||||    
T  8232 gcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 6217 - 5990
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6217 ttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 6118  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  |||||    
T  6117 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgat 6018  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  6017 tatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 172015 - 172242
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  172015 ttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattca 172114  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    | |||||||||||||     ||||||||||||| ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  172115 tccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgat 172214  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  172215 tatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 177718 - 177945
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  177718 ttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattca 177817  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    | |||||||||||||     ||||||||||||| ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  177818 tccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgat 177917  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  177918 tatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 8e-80; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 23153557 - 23153786
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23153557 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 23153656  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     |||||||||||||||||||  |||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  23153657 tgcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 23153756  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    |||||||  |||||||||||||||||||||    
T  23153757 attatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 102 - 323
Target Start/End: Complemental strand, 14626271 - 14626045
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14626271 ttagcataattcaccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 14626172  T
Q  202 tgcatacaaacata-----tcagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    ||||||||||||||      |||   ||||||||||||| ||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||    
T  14626171 tgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgat 14626072  T
Q  297 tatgacaaagactaacccccttacctt 323  Q
    | ||| ||  |||||||||||||||||    
T  14626071 tgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 1650246 - 1650136
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1650246 ttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 1650147  T
Q  202 tgcatacaaac 212  Q
    |||||||||||    
T  1650146 tgcatacaaac 1650136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 35009591 - 35009439
Alignment:
Q  103 tagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcat 202  Q
    |||||||||||||||||||| ||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  35009591 tagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 35009492  T
Q  203 gcataca-----aacatatcagttggagcacgaatttatcaacaatcatccat 250  Q
    |||||||     |||||  ||||| ||||||||||||| ||||||| ||||||    
T  35009491 gcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 1657901 - 1657748
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||| || ||||||| ||||||||||| |||||  |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  1657901 ttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 1657802  T
Q  202 tgcatacaaacata-----tcagttggagcacgaatttatcaacaatcatccat 250  Q
    ||||| ||||||||      ||||| ||||||||||||| ||||||| ||||||    
T  1657801 tgcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 15862581 - 15862694
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||| || ||||||| ||||||||||| |||||  ||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  15862581 ttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 15862680  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  15862681 tgcatacaaacata 15862694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 25175680 - 25175787
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  25175680 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25175779  T
Q  208 caaacata 215  Q
    ||||||||    
T  25175780 caaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 27654118 - 27654011
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || ||||||||||||||||    
T  27654118 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 27654019  T
Q  208 caaacata 215  Q
    ||| ||||    
T  27654018 caagcata 27654011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  255 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgacaaagactaacccccttacctta 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 16825889 - 16825780
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat--cttacaattatcatcaattcatgca 205  Q
    |||| |||||||| | |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||   |||||| || ||||||||||||||    
T  16825889 aaatccaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgca 16825790  T
Q  206 tacaaacata 215  Q
    ||||||||||    
T  16825789 tacaaacata 16825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 19983224 - 19983152
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 19983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 35015089 - 35015017
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 35015017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 29665983 - 29666089
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaatt 199  Q
    |||||||||||||||||||||  ||||||| || |||||  ||||| | |||| |||||| |||||||||||||| |||||| |||||||||||||||||    
T  29665983 ttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatactttgaaacatgtaatttcacccacaatcatacaattatcatcaatt 29666081  T
Q  200 catgcata 207  Q
    ||| ||||    
T  29666082 catacata 29666089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 27751603 - 27751648
Alignment:
Q  170 tcaccaacaatcttacaattatcatcaattcatgcatacaaacata 215  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||    
T  27751603 tcaccaacaatcatacaattgtcatcaattcatgcatacaaacata 27751648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 18583640 - 18583712
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||  || |||||||||||||||||||||||| ||||| |||| ||| ||||||||||| ||||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 18583712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 29605614 - 29605675
Alignment:
Q  157 tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatca 218  Q
    |||||||||||||||||||||||   | |||||||||  ||||||||||| |||||||||||    
T  29605614 tgaacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatca 29605675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 18629693 - 18629629
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||||||| ||||||||| |||||||||||    
T  18629693 tttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatca 18629629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 17083298 - 17083219
Alignment:
Q  140 tatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatca 218  Q
    ||||||||| ||||| | |||||||  ||||||||||||||   | ||||||||| |||||||||||| |||||||||||    
T  17083298 tatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatca 17083219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 16887877 - 16887815
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatat 216  Q
    |||||||||| || |||||||||||   | ||||||||||||| |||||||||||||||||||    
T  16887877 tttgaacatgcaaattcaccaacaacagttcaattatcatcaatttcatgcatacaaacatat 16887815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 1556142 - 1556219
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  1556142 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 1556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 1650053 - 1650020
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaa 325  Q
    |||||||||| |||||||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 16232029 - 16232106
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  16232029 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 16232106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 18086942 - 18086865
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  18086942 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18086865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 23977906 - 23977983
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  23977906 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 23977983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 105 - 314
Target Start/End: Complemental strand, 5211 - 4996
Alignment:
Q  105 gcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgc 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  5211 gcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgc 5112  T
Q  205 atacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgatta 298  Q
    ||||||||||||     ||||||||| ||||||||| ||||||| |||||| ||  |||||||||||||||||||||||||||||||||||| |||||||    
T  5111 atacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgatta 5012  T
Q  299 tgacaaagactaaccc 314  Q
    ||| ||||||||||||    
T  5011 tgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 148; Significance: 5e-78; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 106 - 324
Target Start/End: Complemental strand, 128318 - 128095
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    |||||||| |||||||| |||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  128318 caaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 128219  T
Q  206 tacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatg 300  Q
    |||||||||||     |||||| |||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  128218 tacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatg 128119  T
Q  301 acaaagactaacccccttacctta 324  Q
    | ||||||||||||||||||||||    
T  128118 ataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 31810 - 31703
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| || ||| |||| |||||||||||||| ||||| |||| |||||||||||||||||||| ||||| || |||||||||||||||     
T  31810 aaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcatt 31711  T
Q  208 caaacata 215  Q
    ||||||||    
T  31710 caaacata 31703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 247595 - 247366
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| | | |||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  247595 ttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattca 247496  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 294  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  247495 tgcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 247396  T
Q  295 attatgacaaagactaacccccttacctta 324  Q
    ||||||| ||||||||||||||||||||||    
T  247395 attatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 34276 - 34200
Alignment:
Q  131 ttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    |||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  34276 ttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 106 - 324
Target Start/End: Original strand, 8992 - 9215
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8992 caaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgca 9091  T
Q  206 tacaaacata-----tcagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatg 300  Q
    ||||||||||      ||  ||||||||||||||| |||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||    
T  9092 tacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatg 9191  T
Q  301 acaaagactaacccccttacctta 324  Q
    | ||||||||||||||||||||||    
T  9192 ataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 272135 - 272362
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| | | ||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  272135 ttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattca 272234  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    | |||||||||||||     ||||||||| ||| ||||| ||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  272235 ttcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgat 272334  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
    ||||| ||||||||||||||||||||||    
T  272335 tatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 106 - 324
Target Start/End: Original strand, 12227 - 12450
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  12227 caaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgca 12326  T
Q  206 tacaaacatat-----cagttggagcacgaatttatcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattat 299  Q
    |||||||||||     ||||| ||||||||||||| ||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| | |||||||||    
T  12327 tacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaaattaagatgattat 12425  T
Q  300 gacaaagactaacccccttacctta 324  Q
    || ||||||||||||||||||||||    
T  12426 gataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 89605 - 89378
Alignment:
Q  104 agcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatg 203  Q
    |||| |||||||||||||| ||||||||||||||||||| |||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  89605 agcataattcaccaattgagcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatg 89506  T
Q  204 catacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgat 296  Q
    |||||||| ||||     ||||||||||||||||||| ||||||| |||||| ||   |||||||||| |||||||||||||||||||||||||||||||    
T  89505 catacaaatatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgat 89406  T
Q  297 tatgacaaagactaacccccttacctta 324  Q
     ||||  |||||||||||||||||||||    
T  89405 catgatgaagactaacccccttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 107817 - 107708
Alignment:
Q  217 cagttggagcacgaatttatcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgacaaagactaaccc 314  Q
    ||||||||||||||||||| ||| ||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  107817 cagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaaccc 107718  T
Q  315 ccttacctta 324  Q
    ||||||||||    
T  107717 ccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 102 - 324
Target Start/End: Complemental strand, 123317 - 123087
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  123317 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 123218  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgat 293  Q
    |||||||||||||||     || |||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||| |||||||| ||||| |||||    
T  123217 tgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgat 123118  T
Q  294 gattatgacaaagactaacccccttacctta 324  Q
    |||||||   |||||||||||||||||||||    
T  123117 gattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 123; Significance: 4e-63; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 102 - 276
Target Start/End: Original strand, 148831 - 149012
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  148831 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 148930  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccataat--caaaattcatacaacatttgaaa 276  Q
    |||||||||||||||     |||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148931 tgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 102 - 324
Target Start/End: Original strand, 8959 - 9192
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  8959 ttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 9058  T
Q  202 tgcatacaaacatatca-----gttggagcacgaatttatcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgat 290  Q
    |||||||||||||||||     | ||||||||||||||| ||||||| |||||  ||   ||||| ||||| ||||||||||| || ||||    |||||    
T  9059 tgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgat 9158  T
Q  291 gatgattatgacaaagactaacccccttacctta 324  Q
    |||||||||||  ||||||||| | |||||||||    
T  9159 gatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 324
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  224 agcacgaatttatcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgacaaagactaacccccttacctt 323  Q
    |||| |||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  324 a 324  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 53508 - 53572
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaat-tcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| |||| |||||||| |||||||||||    
T  53508 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatatcatgcattcaaacatatca 53572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 243
Target Start/End: Original strand, 48301 - 48443
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48301 caaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 48400  T
Q  206 tacaaacatat-----cagttggagcacgaatttatcaacaat 243  Q
    |||||||||||     ||||||||||||||||||| |||||||    
T  48401 tacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 20493 - 20564
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||  || |||||||||||||||||||||||| ||||| |||| ||| ||||||| ||| ||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 20564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 13466 - 13353
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13466 ttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 13367  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  13366 tgcatacaaacata 13353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 9490 - 9377
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9490 ttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 9391  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  9390 tgcatacaaacata 9377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 16388 - 16275
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16388 ttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 16289  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  16288 tgcatacaaacata 16275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 103 - 250
Target Start/End: Original strand, 41759 - 41911
Alignment:
Q  103 tagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcat 202  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  41759 tagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 41858  T
Q  203 gcatacaaacata-----tcagttggagcacgaatttatcaacaatcatccat 250  Q
    |||||||||||||      ||||| ||||||||||||| ||||||| ||||||    
T  41859 gcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 687 - 534
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  687 ttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 588  T
Q  202 tgcatacaaacatat-----cagttggagcacgaatttatcaacaatcatccat 250  Q
    |||||||||||||||     ||||||||||||||||||| ||||||| ||||||    
T  587 tgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 107861 - 107995
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  107861 caaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 107960  T
Q  206 tacaaacatat-----cagttggagcacgaattta 235  Q
    |||||||||||     |||||||||||||||||||    
T  107961 tacaaacatatcattacagttggagcacgaattta 107995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 64663 - 64573
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 198  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  64663 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaat 64573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 5355 - 5254
Alignment:
Q  104 agcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatg 203  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5355 agcaaaattcaccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatg 5256  T
Q  204 ca 205  Q
    ||    
T  5255 ca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 103 - 250
Target Start/End: Original strand, 13617 - 13769
Alignment:
Q  103 tagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcat 202  Q
    |||||||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  13617 tagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 13716  T
Q  203 gcatacaaacatatc-----agttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||| |     |||| ||||||||||||| ||||||| ||||||    
T  13717 gcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 42677 - 42746
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| ||| ||||||||||||||||   ||||||||||| |||||||||||||||||||| ||||||    
T  42677 atgattatgataaaaactaacccccttacct---ttatctccaactattagctctagcttcacttttgctcct 42746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 3073 - 3186
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  3073 ttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 3172  T
Q  202 tgcatacaaacata 215  Q
    || |||||||||||    
T  3173 tggatacaaacata 3186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 5645 - 5785
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  5645 aaattcaccaattgagcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcata 5744  T
Q  208 caaacatatc-----agttggagcacgaatttatcaacaat 243  Q
    |||||||| |     |||||||||||||||||| |||||||    
T  5745 caaacataacatcaaagttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 3832 - 3936
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttt-tacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattc 200  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3832 ttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattc 3931  T
Q  201 atgca 205  Q
    |||||    
T  3932 atgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 152 - 259
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| | || |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  152 aaattcaccaattgagcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcata 251  T
Q  208 caaacata 215  Q
    ||||||||    
T  252 caaacata 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 43114 - 43221
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||| | |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43114 aaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 43213  T
Q  208 caaacata 215  Q
     |||||||    
T  43214 gaaacata 43221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 14202 - 14089
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||    
T  14202 ttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattca 14103  T
Q  202 tgcatacaaacata 215  Q
    |||||||| |||||    
T  14102 tgcatacagacata 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 21257 - 21144
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    |||| |||||||||||||||| | |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |    
T  21257 ttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaa 21158  T
Q  202 tgcatacaaacata 215  Q
    || |||||||||||    
T  21157 tggatacaaacata 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 34613 - 34500
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 201  Q
    ||||||||||||||| |||||  ||||||||||||||||   ||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  34613 ttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 34514  T
Q  202 tgcatacaaacata 215  Q
    ||||||||||||||    
T  34513 tgcatacaaacata 34500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 1439 - 1332
Alignment:
Q  108 aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 207  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  1439 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 1340  T
Q  208 caaacata 215  Q
    ||||||||    
T  1339 caaacata 1332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 72; Significance: 1e-32; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 26927 - 27058
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  26927 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 27026  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  27027 gttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 22672 - 22796
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  22672 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 22771  T
Q  219 gttggagcacgaatttatcaacaat 243  Q
    ||||||||||||||||| |||||||    
T  22772 gttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 1713 - 1582
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  1713 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 1614  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  1613 gttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 37197 - 37066
Alignment:
Q  124 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc-----a 218  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||     |    
T  37197 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 37098  T
Q  219 gttggagcacgaatttatcaacaatcatccat 250  Q
    ||||||||||||||||| ||||||| ||||||    
T  37097 gttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 41632 - 41704
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 41704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 80187 - 80259
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcct 80259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 162111 - 162038
Alignment:
Q  291 gatgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 162038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 166197 - 166124
Alignment:
Q  291 gatgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 166124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 5809 - 5737
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 6015 - 5943
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 31212 - 31140
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 31140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 45144 - 45244
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatg 203  Q
    |||||||||||||||||  ||||||| || |||||  ||||| |||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  45144 caaaattcaccaattgagtacaattt-caaaacttgacatttatacatactttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatg 45242  T
Q  204 ca 205  Q
    ||    
T  45243 ca 45244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 54530 - 54630
Alignment:
Q  106 caaaattcaccaattgaacacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatg 203  Q
    |||||||||||||||||  ||||||| || |||||  ||||| |||||| |||||| |||| ||||||||| |||||| |||||||||||||||||||||    
T  54530 caaaattcaccaattgagtacaattt-cataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaattatcatcaattcatg 54628  T
Q  204 ca 205  Q
    ||    
T  54629 ca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 385 - 312
Alignment:
Q  291 gatgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    ||||||||||| ||||| ||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcct 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 3299 - 3410
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacata-tttgaac-atgtaatttcaccaacaatcttacaattatcatcaatt 199  Q
    |||||||||||||||| ||||  ||||||| || |||||   |||| |||||| ||||||  |||||||||||||||||||| ||||| |||||| ||||    
T  3299 ttagcaaaattcaccatttgagtacaattt-cataacttgatatttatacatactttgaaatatgtaatttcaccaacaatcatacaaatatcattaatt 3397  T
Q  200 catgcatacaaac 212  Q
    |||||||||||||    
T  3398 catgcatacaaac 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 56253 - 56149
Alignment:
Q  102 ttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaa--catgtaatttcaccaacaatcttacaattatcatcaatt 199  Q
    |||||||||||||||| |||| |||||||| || |||||  ||||| |||||| || ||  |||||||||||| | |||||| ||||||||||||||| |    
T  56253 ttagcaaaattcaccatttgagcacaattt-cataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaat 56155  T
Q  200 catgca 205  Q
    ||||||    
T  56154 catgca 56149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 1701 - 1772
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||  || |||||||||||||||||||||||| ||||| |||| ||| ||||||||||| ||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 19881 - 19810
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||  || |||||||||||||||||||||||| ||||| |||| ||| ||||||||||| ||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 19810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 24185 - 24114
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||  || |||||||||||||||||||||||| ||||| |||| ||| ||||||| ||| ||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 24114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 3551 - 3625
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatg 203  Q
    |||||||||||| || || |||||  |||||||||||||||||||| |||||| ||| || ||||||||||||||    
T  3551 tttcacaacttaacaattatacatgctttgaacatgtaatttcacccacaatcataccataatcatcaattcatg 3625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 362
Target Start/End: Original strand, 94 - 164
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcc 362  Q
    |||||||||  || |||||||||||||||||||||||| ||||| |||| ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 8172 - 8236
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| || |||||||||||   | ||||||||||||| |||||||||||||||||||||    
T  8172 tttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatca 8236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 54012 - 54088
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    |||||||||||| || || |||||  |||||||||||||||||||| |||| | ||| || ||||||||||||||||    
T  54012 tttcacaacttaacaattatacatgctttgaacatgtaatttcacccacaaacataccataatcatcaattcatgca 54088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 6335 - 6264
Alignment:
Q  293 tgattatgacaaagactaacccccttaccttaattatctccaac-attagctctagcttcactttagctcct 363  Q
    |||||||||  || |||||||||||||||||||||||| || || |||| ||| ||||||||||| ||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcct 6264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 22514 - 22452
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatat 216  Q
    |||||||||| || |||||||||||   | ||||||||||||| |||||||||||||||||||    
T  22514 tttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatat 22452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 1694 - 1617
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  1694 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 1617  T

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Target: scaffold0467 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 10458 - 10381
Alignment:
Q  130 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgca 205  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| | ||| || ||||||||||||||||    
T  10458 tttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 10381  T

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Target: scaffold0193 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 4742 - 4831
Alignment:
Q  131 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  4742 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 4831  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 22520 - 22443
Alignment:
Q  143 catttttacatattt-gaacatgtaatttcaccaacaatcttacaattatcatcaatt-catgcatacaaacatatca 218  Q
    ||||| ||||||||| ||||||| || |||||||||||   |  |||||||||||||| |||||||||||||||||||    
T  22520 catttatacatattttgaacatgcaaattcaccaacaacaattaaattatcatcaatttcatgcatacaaacatatca 22443  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  292 atgattatgacaaagactaacccccttaccttaa 325  Q
    |||||||||| |||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0706 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 2687 - 2751
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  2687 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatca 2751  T

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Target: scaffold0597 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 6823 - 6887
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  6823 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatca 6887  T

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Target: scaffold0465 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0409 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 1449 - 1369
Alignment:
Q  140 tatcatttttacata-tttgaacatgtaatttcaccaacaatcttacaattatcatcaattc-atgcatacaaacatatca 218  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||   | ||||||||| |||||  ||||||||||||||||||    
T  1449 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatca 1369  T

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Target: scaffold0409; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 9704 - 9624
Alignment:
Q  140 tatcatttttacata-tttgaacatgtaatttcaccaacaatcttacaattatcatcaattc-atgcatacaaacatatca 218  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||   | ||||||||| |||||  ||||||||||||||||||    
T  9704 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatca 9624  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 76932 - 76868
Alignment:
Q  155 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatca 218  Q
    |||||||||| ||||||||||||||   | ||||||||| ||| ||||||||| |||||||||||    
T  76932 tttgaacatgaaatttcaccaacaacaattcaattatcaacaatttcatgcattcaaacatatca 76868  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  292 atgattatgacaaagactaacccccttacctta 324  Q
    |||||||||| ||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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