View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13443_high_9 (Length: 371)

Name: NF13443_high_9
Description: NF13443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13443_high_9
NF13443_high_9
[»] chr4 (37 HSPs)
chr4 (1-317)||(10644227-10644554)
chr4 (1-318)||(47357662-47357990)
chr4 (1-185)||(13048293-13048477)
chr4 (4-185)||(15675161-15675341)
chr4 (4-185)||(31115640-31115820)
chr4 (4-185)||(13246441-13246621)
chr4 (61-185)||(10104322-10104445)
chr4 (61-318)||(17145574-17145845)
chr4 (4-366)||(54118120-54118496)
chr4 (180-317)||(18169168-18169308)
chr4 (61-318)||(18248286-18248557)
chr4 (180-318)||(7131982-7132123)
chr4 (180-318)||(19020684-19020825)
chr4 (180-318)||(20000921-20001062)
chr4 (208-318)||(15287162-15287275)
chr4 (208-318)||(15294271-15294384)
chr4 (216-318)||(22351981-22352086)
chr4 (216-318)||(26339253-26339358)
chr4 (286-366)||(25119059-25119139)
chr4 (94-183)||(121990-122078)
chr4 (208-308)||(8378377-8378480)
chr4 (61-181)||(40885630-40885749)
chr4 (180-281)||(22738467-22738568)
chr4 (1-185)||(26680209-26680391)
chr4 (286-366)||(5682380-5682460)
chr4 (4-82)||(111406-111484)
chr4 (61-181)||(8374576-8374696)
chr4 (245-318)||(9795490-9795565)
chr4 (110-185)||(10488678-10488753)
chr4 (110-185)||(16327998-16328073)
chr4 (285-319)||(14996444-14996478)
chr4 (61-102)||(13590213-13590254)
chr4 (181-230)||(33240898-33240947)
chr4 (302-359)||(41165808-41165865)
chr4 (302-359)||(47534933-47534990)
chr4 (84-184)||(7850090-7850190)
chr4 (61-101)||(18276501-18276541)
[»] chr3 (58 HSPs)
chr3 (1-317)||(16821147-16821474)
chr3 (1-317)||(55316227-55316555)
chr3 (1-317)||(41270083-41270411)
chr3 (4-319)||(15614845-15615170)
chr3 (1-318)||(15936552-15936882)
chr3 (1-185)||(13975793-13975977)
chr3 (1-185)||(45860813-45860997)
chr3 (1-318)||(15938394-15938724)
chr3 (1-185)||(13954961-13955145)
chr3 (1-185)||(14842633-14842816)
chr3 (4-185)||(15859096-15859276)
chr3 (4-185)||(51158090-51158270)
chr3 (61-317)||(12264710-12264981)
chr3 (4-183)||(2049821-2049999)
chr3 (4-183)||(12030221-12030399)
chr3 (208-317)||(22275435-22275547)
chr3 (4-185)||(13838905-13839085)
chr3 (180-317)||(49232634-49232774)
chr3 (180-318)||(12902007-12902148)
chr3 (180-318)||(18911191-18911332)
chr3 (180-317)||(15468258-15468398)
chr3 (180-317)||(18896962-18897102)
chr3 (180-317)||(25058937-25059077)
chr3 (208-317)||(1467657-1467769)
chr3 (4-185)||(17912554-17912733)
chr3 (286-366)||(3992873-3992953)
chr3 (286-366)||(55513193-55513273)
chr3 (212-317)||(12812071-12812179)
chr3 (286-366)||(2844514-2844594)
chr3 (301-361)||(15857120-15857180)
chr3 (286-366)||(54037976-54038056)
chr3 (204-318)||(5228535-5228651)
chr3 (301-368)||(16743991-16744058)
chr3 (301-366)||(19232104-19232169)
chr3 (286-366)||(7854305-7854385)
chr3 (181-318)||(54651656-54651796)
chr3 (286-366)||(17955832-17955916)
chr3 (286-347)||(45581954-45582016)
chr3 (180-265)||(44229183-44229268)
chr3 (4-106)||(47984661-47984763)
chr3 (4-106)||(47993948-47994050)
chr3 (4-106)||(48003235-48003337)
chr3 (4-106)||(48012521-48012623)
chr3 (110-185)||(16744187-16744262)
chr3 (302-359)||(17205019-17205076)
chr3 (110-185)||(2449310-2449385)
chr3 (61-185)||(11986238-11986362)
chr3 (304-359)||(12031849-12031904)
chr3 (285-318)||(8268650-8268683)
chr3 (285-318)||(8275750-8275783)
chr3 (61-102)||(11638424-11638465)
chr3 (181-230)||(12030163-12030212)
chr3 (181-230)||(13839092-13839141)
chr3 (302-359)||(17191879-17191936)
chr3 (302-359)||(38810868-38810925)
chr3 (61-105)||(15876135-15876179)
chr3 (59-127)||(16880188-16880256)
chr3 (65-175)||(54651529-54651639)
[»] chr7 (46 HSPs)
chr7 (1-318)||(13572684-13573013)
chr7 (1-317)||(13910939-13911269)
chr7 (1-317)||(10989418-10989746)
chr7 (1-317)||(2437465-2437794)
chr7 (1-317)||(16478879-16479205)
chr7 (1-318)||(18253760-18254090)
chr7 (1-185)||(25292410-25292593)
chr7 (4-230)||(16211777-16212013)
chr7 (4-185)||(36052678-36052855)
chr7 (4-230)||(47481047-47481283)
chr7 (4-359)||(3059977-3060344)
chr7 (4-185)||(11580811-11580991)
chr7 (180-318)||(18979938-18980079)
chr7 (4-230)||(13321025-13321263)
chr7 (180-317)||(15950709-15950849)
chr7 (4-185)||(13037086-13037266)
chr7 (180-318)||(15760031-15760172)
chr7 (208-317)||(7822954-7823066)
chr7 (208-317)||(7830265-7830377)
chr7 (208-317)||(27101555-27101667)
chr7 (208-317)||(27108903-27109015)
chr7 (208-317)||(27176659-27176771)
chr7 (208-317)||(38783647-38783759)
chr7 (180-318)||(13758568-13758709)
chr7 (286-366)||(32493898-32493978)
chr7 (180-318)||(15927766-15927907)
chr7 (180-318)||(14250815-14250956)
chr7 (237-318)||(15862174-15862258)
chr7 (286-366)||(126738-126818)
chr7 (216-283)||(16418731-16418798)
chr7 (286-366)||(1936869-1936949)
chr7 (216-283)||(10000325-10000392)
chr7 (1-185)||(7293025-7293207)
chr7 (180-281)||(48622623-48622724)
chr7 (286-366)||(111121-111201)
chr7 (287-366)||(7283908-7283987)
chr7 (110-185)||(11516343-11516418)
chr7 (110-185)||(15441636-15441711)
chr7 (110-185)||(30262201-30262276)
chr7 (302-359)||(13377867-13377924)
chr7 (302-359)||(13389693-13389750)
chr7 (302-352)||(17223796-17223846)
chr7 (136-185)||(296038-296087)
chr7 (61-102)||(9723946-9723987)
chr7 (61-102)||(46474068-46474109)
chr7 (303-359)||(16919870-16919926)
[»] chr5 (39 HSPs)
chr5 (1-318)||(27009849-27010178)
chr5 (1-317)||(18777907-18778236)
chr5 (1-317)||(25426636-25426965)
chr5 (1-317)||(12382-12711)
chr5 (1-317)||(22366396-22366725)
chr5 (1-317)||(43443312-43443639)
chr5 (3-317)||(4199900-4200227)
chr5 (1-317)||(19499907-19500236)
chr5 (1-317)||(21073510-21073839)
chr5 (45-317)||(29188201-29188483)
chr5 (4-185)||(23506976-23507156)
chr5 (4-185)||(22053905-22054085)
chr5 (61-318)||(35791015-35791287)
chr5 (4-185)||(18531139-18531319)
chr5 (61-317)||(11211983-11212253)
chr5 (204-318)||(7425546-7425663)
chr5 (180-317)||(17471506-17471646)
chr5 (4-185)||(27182619-27182799)
chr5 (180-318)||(23514759-23514900)
chr5 (208-317)||(21932299-21932411)
chr5 (208-317)||(21938469-21938581)
chr5 (208-317)||(35582262-35582374)
chr5 (208-318)||(1219437-1219550)
chr5 (180-317)||(10777888-10778028)
chr5 (216-318)||(23328791-23328896)
chr5 (216-318)||(24616395-24616500)
chr5 (216-318)||(24712771-24712876)
chr5 (216-318)||(24745789-24745894)
chr5 (4-230)||(34939289-34939524)
chr5 (208-313)||(22883006-22883114)
chr5 (208-317)||(36989688-36989800)
chr5 (302-361)||(11584389-11584448)
chr5 (110-185)||(20623085-20623160)
chr5 (110-185)||(21233600-21233675)
chr5 (110-185)||(16536313-16536388)
chr5 (61-185)||(32950761-32950886)
chr5 (302-359)||(19862547-19862604)
chr5 (302-359)||(21222462-21222519)
chr5 (61-102)||(21617083-21617124)
[»] chr8 (40 HSPs)
chr8 (5-317)||(21851881-21852205)
chr8 (5-315)||(21844490-21844812)
chr8 (1-318)||(16674307-16674636)
chr8 (5-317)||(30120734-30121060)
chr8 (4-318)||(24548993-24549317)
chr8 (4-317)||(6774175-6774498)
chr8 (1-182)||(222754-222935)
chr8 (1-182)||(736377-736558)
chr8 (1-182)||(860272-860453)
chr8 (4-185)||(43373540-43373720)
chr8 (4-185)||(16193788-16193968)
chr8 (61-318)||(16195298-16195570)
chr8 (4-366)||(16404852-16405224)
chr8 (180-317)||(22006176-22006316)
chr8 (4-185)||(24928863-24929043)
chr8 (180-318)||(13720845-13720986)
chr8 (208-317)||(271278-271390)
chr8 (208-317)||(644530-644642)
chr8 (208-317)||(830265-830377)
chr8 (209-317)||(15319077-15319188)
chr8 (209-317)||(15499446-15499557)
chr8 (208-318)||(13662182-13662295)
chr8 (180-318)||(16872968-16873109)
chr8 (286-366)||(274766-274846)
chr8 (286-366)||(641003-641083)
chr8 (286-366)||(826809-826889)
chr8 (208-317)||(22088712-22088824)
chr8 (4-230)||(17345581-17345816)
chr8 (286-366)||(24716714-24716794)
chr8 (1-185)||(22907286-22907468)
chr8 (286-366)||(39115598-39115678)
chr8 (121-182)||(691909-691970)
chr8 (110-185)||(5238203-5238278)
chr8 (110-185)||(24661320-24661395)
chr8 (110-185)||(43685662-43685737)
chr8 (61-102)||(5854681-5854722)
chr8 (302-359)||(17285543-17285600)
chr8 (302-359)||(21198005-21198062)
chr8 (61-102)||(22497348-22497389)
chr8 (61-102)||(38533716-38533757)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-317)||(43005-43333)
scaffold0076 (208-317)||(39329-39441)
[»] scaffold0116 (2 HSPs)
scaffold0116 (4-318)||(46-370)
scaffold0116 (286-366)||(30417-30497)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-318)||(64438-64772)
scaffold0026 (1-318)||(107755-108085)
[»] chr2 (40 HSPs)
chr2 (1-317)||(19886576-19886905)
chr2 (1-185)||(17396724-17396908)
chr2 (1-366)||(19794581-19794959)
chr2 (4-366)||(20627190-20627565)
chr2 (4-183)||(462749-462927)
chr2 (4-185)||(24341461-24341641)
chr2 (4-183)||(36982515-36982693)
chr2 (1-185)||(7507916-7508099)
chr2 (180-318)||(12728590-12728731)
chr2 (180-318)||(16935791-16935932)
chr2 (180-318)||(17006451-17006592)
chr2 (180-318)||(23777962-23778103)
chr2 (4-185)||(8891253-8891433)
chr2 (4-185)||(43643029-43643209)
chr2 (180-318)||(8944044-8944185)
chr2 (180-318)||(34824673-34824814)
chr2 (208-317)||(11231256-11231368)
chr2 (208-317)||(22513103-22513215)
chr2 (208-317)||(24685699-24685811)
chr2 (208-317)||(28775725-28775837)
chr2 (180-318)||(3798520-3798661)
chr2 (180-318)||(12635785-12635926)
chr2 (180-318)||(12641559-12641700)
chr2 (216-318)||(23774370-23774475)
chr2 (4-230)||(25265406-25265642)
chr2 (180-318)||(42177886-42178027)
chr2 (302-366)||(22275061-22275125)
chr2 (286-366)||(22284278-22284358)
chr2 (216-283)||(5888585-5888652)
chr2 (286-366)||(43642833-43642913)
chr2 (287-366)||(15633538-15633617)
chr2 (208-265)||(21142121-21142178)
chr2 (110-185)||(19689473-19689548)
chr2 (110-185)||(23820187-23820262)
chr2 (302-359)||(43646232-43646289)
chr2 (110-185)||(14906512-14906587)
chr2 (110-184)||(20015127-20015201)
chr2 (61-102)||(16292940-16292981)
chr2 (302-359)||(25305769-25305826)
chr2 (307-359)||(19660221-19660273)
[»] chr1 (29 HSPs)
chr1 (1-317)||(5072304-5072632)
chr1 (1-299)||(18601052-18601362)
chr1 (1-317)||(22227817-22228146)
chr1 (1-317)||(22232514-22232843)
chr1 (4-319)||(2116265-2116591)
chr1 (59-319)||(45051489-45051759)
chr1 (4-230)||(20931356-20931592)
chr1 (1-368)||(41394230-41394609)
chr1 (4-230)||(20913048-20913277)
chr1 (180-317)||(18059676-18059816)
chr1 (5-185)||(20893698-20893877)
chr1 (183-318)||(46523590-46523727)
chr1 (208-317)||(17004864-17004976)
chr1 (4-185)||(20445690-20445870)
chr1 (4-185)||(20531455-20531635)
chr1 (216-318)||(22035681-22035786)
chr1 (212-317)||(19962417-19962525)
chr1 (286-366)||(21860334-21860414)
chr1 (216-318)||(7640851-7640956)
chr1 (286-360)||(44034829-44034903)
chr1 (204-317)||(38055009-38055125)
chr1 (180-310)||(17148765-17148898)
chr1 (4-185)||(37844522-37844703)
chr1 (300-366)||(41218742-41218808)
chr1 (302-359)||(27675134-27675191)
chr1 (110-185)||(51452608-51452683)
chr1 (302-359)||(13376711-13376768)
chr1 (302-359)||(20177513-20177570)
chr1 (61-102)||(25093926-25093967)
[»] chr6 (35 HSPs)
chr6 (1-317)||(25175571-25175901)
chr6 (1-317)||(27653898-27654227)
chr6 (1-306)||(16825678-16825998)
chr6 (4-319)||(1650020-1650345)
chr6 (4-230)||(14626134-14626370)
chr6 (180-318)||(16232090-16232231)
chr6 (4-230)||(35009455-35009691)
chr6 (180-317)||(22251484-22251624)
chr6 (180-318)||(1556203-1556344)
chr6 (208-317)||(10488925-10489037)
chr6 (208-317)||(16376291-16376403)
chr6 (208-317)||(16383615-16383727)
chr6 (180-317)||(22225656-22225796)
chr6 (4-185)||(23153458-23153638)
chr6 (208-318)||(19610244-19610357)
chr6 (216-318)||(29869693-29869798)
chr6 (208-317)||(16556057-16556169)
chr6 (208-317)||(16632613-16632725)
chr6 (212-317)||(19299467-19299575)
chr6 (286-366)||(19983144-19983224)
chr6 (286-366)||(35015009-35015089)
chr6 (4-230)||(1657764-1657999)
chr6 (180-318)||(18086740-18086881)
chr6 (180-318)||(23977967-23978108)
chr6 (61-266)||(29665941-29666157)
chr6 (180-318)||(13620711-13620852)
chr6 (4-230)||(15862484-15862718)
chr6 (62-176)||(27740907-27741021)
chr6 (286-366)||(18583640-18583720)
chr6 (302-359)||(21623506-21623563)
chr6 (182-230)||(27751624-27751672)
chr6 (286-317)||(14626045-14626076)
chr6 (61-102)||(18399005-18399046)
chr6 (302-359)||(22361619-22361676)
chr6 (181-230)||(23153645-23153694)
[»] scaffold0023 (5 HSPs)
scaffold0023 (1-317)||(36101-36430)
scaffold0023 (197-314)||(169830-169949)
scaffold0023 (180-318)||(153924-154065)
scaffold0023 (4-185)||(48609-48789)
scaffold0023 (181-230)||(48796-48845)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-314)||(31593-31920)
scaffold0008 (4-183)||(128243-128420)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-317)||(21031-21359)
scaffold0139 (1-317)||(13977-14304)
[»] scaffold0215 (2 HSPs)
scaffold0215 (4-318)||(9265-9589)
scaffold0215 (4-318)||(16163-16487)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-317)||(5130-5458)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-318)||(3730-4061)
[»] scaffold1711 (1 HSPs)
scaffold1711 (99-317)||(1220-1450)
[»] scaffold0529 (1 HSPs)
scaffold0529 (4-318)||(2973-3300)
[»] scaffold0772 (2 HSPs)
scaffold0772 (16-185)||(5551-5720)
scaffold0772 (181-230)||(5727-5776)
[»] scaffold0420 (1 HSPs)
scaffold0420 (89-317)||(13242-13480)
[»] scaffold0266 (2 HSPs)
scaffold0266 (4-185)||(1135-1315)
scaffold0266 (1-185)||(3654-3837)
[»] scaffold0498 (1 HSPs)
scaffold0498 (4-183)||(8889-9067)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-185)||(48195-48378)
scaffold0049 (301-366)||(20507-20572)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-230)||(12123-12360)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-185)||(6136-6318)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-185)||(1028-1210)
[»] scaffold0025 (3 HSPs)
scaffold0025 (4-183)||(148732-148910)
scaffold0025 (4-185)||(8860-9040)
scaffold0025 (181-230)||(9047-9096)
[»] scaffold0195 (2 HSPs)
scaffold0195 (4-230)||(19217-19453)
scaffold0195 (4-230)||(21301-21537)
[»] scaffold0077 (2 HSPs)
scaffold0077 (4-230)||(36929-37165)
scaffold0077 (302-366)||(15319-15383)
[»] scaffold0218 (1 HSPs)
scaffold0218 (4-183)||(5135-5313)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-185)||(123236-123416)
[»] scaffold0001 (2 HSPs)
scaffold0001 (4-185)||(171916-172096)
scaffold0001 (4-185)||(177619-177799)
[»] scaffold0162 (3 HSPs)
scaffold0162 (8-183)||(26489-26663)
scaffold0162 (110-230)||(8196-8327)
scaffold0162 (302-359)||(6877-6934)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-230)||(34476-34716)
[»] scaffold0213 (1 HSPs)
scaffold0213 (208-317)||(29388-29500)
[»] scaffold0125 (1 HSPs)
scaffold0125 (4-230)||(41659-41895)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-99)||(48522-48620)
[»] scaffold0107 (2 HSPs)
scaffold0107 (208-317)||(31535-31647)
scaffold0107 (180-270)||(39844-39934)
[»] scaffold0012 (2 HSPs)
scaffold0012 (4-185)||(247514-247694)
scaffold0012 (180-318)||(34075-34216)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-185)||(272036-272216)
scaffold0009 (61-102)||(69524-69565)
[»] scaffold0184 (1 HSPs)
scaffold0184 (286-366)||(31132-31212)
[»] scaffold0078 (2 HSPs)
scaffold0078 (286-366)||(41632-41712)
scaffold0078 (1-185)||(37138-37320)
[»] scaffold1500 (1 HSPs)
scaffold1500 (180-318)||(1431-1572)
[»] scaffold0761 (1 HSPs)
scaffold0761 (180-318)||(1492-1633)
[»] scaffold0183 (1 HSPs)
scaffold0183 (216-318)||(6831-6936)
[»] scaffold1560 (1 HSPs)
scaffold1560 (1-99)||(9-107)
[»] scaffold0092 (1 HSPs)
scaffold0092 (208-317)||(10666-10778)
[»] scaffold0132 (2 HSPs)
scaffold0132 (4-230)||(13517-13753)
scaffold0132 (286-366)||(42677-42754)
[»] scaffold0106 (1 HSPs)
scaffold0106 (4-230)||(41740-41976)
[»] scaffold0383 (1 HSPs)
scaffold0383 (183-318)||(2593-2732)
[»] scaffold0191 (1 HSPs)
scaffold0191 (208-317)||(7374-7486)
[»] scaffold0016 (3 HSPs)
scaffold0016 (286-366)||(166116-166196)
scaffold0016 (286-360)||(162036-162110)
scaffold0016 (302-359)||(116410-116467)
[»] scaffold0686 (2 HSPs)
scaffold0686 (286-360)||(5735-5809)
scaffold0686 (286-360)||(5941-6015)
[»] scaffold0034 (1 HSPs)
scaffold0034 (286-366)||(80187-80267)
[»] scaffold0003 (1 HSPs)
scaffold0003 (216-283)||(7443-7510)
[»] scaffold0467 (1 HSPs)
scaffold0467 (180-281)||(10296-10397)
[»] scaffold0155 (1 HSPs)
scaffold0155 (218-318)||(23666-23769)
[»] scaffold0066 (2 HSPs)
scaffold0066 (61-318)||(45098-45370)
scaffold0066 (61-318)||(54484-54756)
[»] scaffold0516 (1 HSPs)
scaffold0516 (216-318)||(12044-12149)
[»] scaffold1542 (1 HSPs)
scaffold1542 (6-185)||(606-784)
[»] scaffold0017 (1 HSPs)
scaffold0017 (208-281)||(54100-54173)
[»] scaffold0018 (1 HSPs)
scaffold0018 (111-183)||(51256-51328)
[»] scaffold0892 (1 HSPs)
scaffold0892 (206-281)||(3637-3712)
[»] scaffold1164 (1 HSPs)
scaffold1164 (301-366)||(1715-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (301-366)||(19802-19867)
scaffold0122 (301-366)||(24106-24171)
[»] scaffold0342 (1 HSPs)
scaffold0342 (286-366)||(304-384)
[»] scaffold0622 (1 HSPs)
scaffold0622 (4-82)||(9393-9471)
[»] scaffold0876 (1 HSPs)
scaffold0876 (301-357)||(108-164)
[»] scaffold0310 (1 HSPs)
scaffold0310 (301-361)||(6261-6321)
[»] scaffold0084 (1 HSPs)
scaffold0084 (61-185)||(56171-56295)
[»] scaffold0032 (1 HSPs)
scaffold0032 (245-318)||(13267-13342)
[»] scaffold0028 (1 HSPs)
scaffold0028 (111-185)||(89526-89600)
[»] scaffold0361 (1 HSPs)
scaffold0361 (61-230)||(3257-3437)
[»] scaffold0013 (1 HSPs)
scaffold0013 (302-359)||(35816-35873)
[»] scaffold0151 (1 HSPs)
scaffold0151 (61-181)||(22483-22602)
[»] scaffold0141 (2 HSPs)
scaffold0141 (110-185)||(22656-22731)
scaffold0141 (110-185)||(26911-26986)
[»] scaffold0124 (1 HSPs)
scaffold0124 (110-185)||(1654-1729)
[»] scaffold0006 (1 HSPs)
scaffold0006 (61-108)||(197386-197433)
[»] scaffold1295 (1 HSPs)
scaffold1295 (302-359)||(442-499)
[»] scaffold0507 (1 HSPs)
scaffold0507 (302-359)||(1363-1420)
[»] scaffold0053 (1 HSPs)
scaffold0053 (302-359)||(76699-76756)


Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 10644227 - 10644554
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10644227 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 10644326  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||           |||||||||    
T  10644327 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaat 10644426  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatga 289  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10644427 tcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatga 10644526  T
Q  290 ttgtgataataactaacccccttacctt 317  Q
    ||||||||||||||||||||||||||||    
T  10644527 ttgtgataataactaacccccttacctt 10644554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 47357662 - 47357990
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  47357662 atccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 47357761  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  47357762 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 47357861  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatga 289  Q
     ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47357862 ccatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaggaaatgcaaaattacatga 47357961  T
Q  290 ttgtgataataactaacccccttacctta 318  Q
    |||||||||||||||||||||||||||||    
T  47357962 ttgtgataataactaacccccttacctta 47357990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 13048477 - 13048293
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||||| | |||||||||||||  |||||||    
T  13048477 atccatgaatatgcaaacccaagcaattattcattaatcatattatctaataacattcataacatcatttgaacaagcatcacatctcaaactaacaaca 13048378  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||||||||||| ||||| ||||||||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  13048377 acttaggagaaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcat 13048293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 15675341 - 15675161
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | ||||||||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| ||||||||||||    
T  15675341 catgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaact 15675242  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  15675241 tagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 15675161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 31115640 - 31115820
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | ||||||||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| ||||||||||||    
T  31115640 catgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaact 31115739  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||| ||||||||||||| |||| |||  ||| ||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  31115740 tagga-aaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcat 31115820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 13246441 - 13246621
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||||||||    
T  13246441 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaact 13246540  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  13246541 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 13246621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 10104445 - 10104322
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttg 160  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||    
T  10104445 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattg 10104347  T
Q  161 aacatgtaatttcaccaacaatcat 185  Q
    |||||||||||||||||||||||||    
T  10104346 aacatgtaatttcaccaacaatcat 10104322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 318
Target Start/End: Complemental strand, 17145845 - 17145574
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| |||| || | |||  ||| |||||||||||| |||||| |||    
T  17145845 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatca-aaattcactaattgagtataatt-tcacaacttaacatttatacatacttt 17145748  T
Q  160 gaa-catgtaatttcaccaacaa-----------tcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    ||| |||||||||||||| ||||           |||||||||||||   |  || ||| |||||||| |||||||||||||| |||| |||||||||||    
T  17145747 gaaacatgtaatttcacccacaaacataccataatcatcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatc 17145648  T
Q  248 aacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacctta 318  Q
    ||| ||||||||||||||||||| |||||||||| |   |||||||| ||||||||||||||||||||||||||    
T  17145647 aactcattttcatacaacatgagaaaatgcaaaaattgaacatgattatgataataactaacccccttacctta 17145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 366
Target Start/End: Complemental strand, 54118496 - 54118120
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatc-aacaacaac 102  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||   ||||||||||||||||| |||||| | || ||||| |||||||||    
T  54118496 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataact-aaatctaacaacaac 54118398  T
Q  103 ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattc 191  Q
    |||| | ||||||||||||| ||||||||  ||| |||||| || || | | |||||||||||||||||||||||||||           ||||||||||    
T  54118397 ttagca-aaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattc 54118299  T
Q  192 atgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatca-acccattttcatacaacatgagcaaatgca-aaatta--cat 287  Q
    |||| |||||||||| |||||||    ||||||||||||  ||  |||| | ||| |  |  |  ||||||||||||  | |||| || ||| ||   ||    
T  54118298 atgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgat 54118199  T
Q  288 gattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  54118198 gattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 18169168 - 18169308
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  18169168 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 18169267  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctt 317  Q
    ||    ||||||||| |||||||||||||||||||||||||    
T  18169268 aaattgtacatgattatgataataactaacccccttacctt 18169308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 318
Target Start/End: Original strand, 18248286 - 18248557
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| |||| || | |||  ||||| |||||||||| |||||| |||    
T  18248286 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatta-aaattcactaattgagtataatt-tcatatcttaacatttatacatacttt 18248383  T
Q  160 gaa-catgtaatttcaccaacaatcat-----------caattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    ||| |||||||||||| | |||| |||           ||||||||||  |  || ||| ||||||||||||||||||||||| |||| |||||||||||    
T  18248384 gaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatc 18248483  T
Q  248 aacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||| ||||| ||||    |||| |||| ||||||||||||||||||||||||||    
T  18248484 aacccattttcatacaacatgagaaaatgtaaaaattgtacaagattatgataataactaacccccttacctta 18248557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 7132123 - 7131982
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  ||||||||||||||||||||||||| |||||||| ||||||||    
T  7132123 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatataacatgagaaaatgcaa 7132024  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  7132023 aaattgtacatgattatgataataactaacccccttacctta 7131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 19020684 - 19020825
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||  ||||||||    
T  19020684 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgacaaaatgcaa 19020783  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| ||||  ||||||||||||||||||||    
T  19020784 aaattgaacatgattatgatggtaactaacccccttacctta 19020825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 20000921 - 20001062
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||| ||||||||    
T  20000921 aatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 20001020  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  20001021 aaattgtacatgattatgataataactaacccccttacctta 20001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 15287275 - 15287162
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataacta 304  Q
    |||||||||||||||||||||||  |   |||||||||||| ||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||||    
T  15287275 catcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 15287176  T
Q  305 acccccttacctta 318  Q
    ||||||||||||||    
T  15287175 acccccttacctta 15287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 15294384 - 15294271
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataacta 304  Q
    |||||||||||||||||||||||  |   |||||||||||| ||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||||    
T  15294384 catcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 15294285  T
Q  305 acccccttacctta 318  Q
    ||||||||||||||    
T  15294284 acccccttacctta 15294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 22352086 - 22351981
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  22352086 caagagcatgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22351987  T
Q  313 acctta 318  Q
    ||||||    
T  22351986 acctta 22351981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 26339253 - 26339358
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  26339253 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 26339352  T
Q  313 acctta 318  Q
    ||||||    
T  26339353 acctta 26339358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 121990 - 122078
Alignment:
Q  94 aacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  121990 aacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 122078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 8378377 - 8378480
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataacta 304  Q
    |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||| ||||    ||||||||| ||||||||||||    
T  8378377 catcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaattgtacatgattatgataataacta 8378476  T
Q  305 accc 308  Q
    ||||    
T  8378477 accc 8378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 40885749 - 40885630
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||| | || |||||||||| |||| |||  ||||||||| |||||| |||||| |||    
T  40885749 aacatcaattgaacatgaatcatatctcaattcaacaataacttagca-aagttcaccaattgagcataat-ttcataacttgacatttatacatacttt 40885652  T
Q  160 gaacatgtaatttcaccaacaa 181  Q
    ||||||||||||||||||||||    
T  40885651 gaacatgtaatttcaccaacaa 40885630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 22738467 - 22738568
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||||||||| ||||||||| |||| |||||||| ||| ||||||||||||||||||||| ||||||||    
T  22738467 aatcatcaattcatgcacaagaaaatagcatcacagcaagaacacgaatttaacatcaattgttcctcagcccattttcatacaacatgagaaaatgcaa 22738566  T
Q  280 aa 281  Q
    ||    
T  22738567 aa 22738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 26680209 - 26680391
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||| | ||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| ||||| |||    
T  26680209 atccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactaca 26680308  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    || |  |  ||||||| | |||| |||||||  |||||||||  ||||||||||||||| |||||||||||| ||||||||||||    
T  26680309 acat--gtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcat 26680391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 111406 - 111484
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatca 82  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| ||||||    
T  111406 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatca 111484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 8374576 - 8374696
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| |||| || | |||  |||||||||||||||| |||||| |||    
T  8374576 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatta-aaattcactaattgagtataat-ttcataacttaacatttatacatacttt 8374673  T
Q  160 gaa-catgtaatttcaccaacaa 181  Q
    ||| |||||||||||||| ||||    
T  8374674 gaagcatgtaatttcacccacaa 8374696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 9795490 - 9795565
Alignment:
Q  245 atcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacctta 318  Q
    |||||||||||| ||||||||||||| ||||| |||| |   |||||||| |||| |||||||||||||||||||||    
T  9795490 atcaacccattt-catacaacatgagaaaatgaaaaaattgaacatgattatgatgataactaacccccttacctta 9795565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 10488678 - 10488753
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  10488678 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 10488753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 16328073 - 16327998
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  16328073 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 16327998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 14996444 - 14996478
Alignment:
Q  285 catgattgtgataataactaacccccttaccttaa 319  Q
    ||||||| |||||||||||||||||||||||||||    
T  14996444 catgattatgataataactaacccccttaccttaa 14996478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 13590254 - 13590213
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  13590254 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 13590213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 33240898 - 33240947
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||||||||||| |||||||||| ||||||||   ||||||||||||    
T  33240898 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 33240947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 41165865 - 41165808
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||| ||||||||| |||| |  |||| | |||||||||||||||||||    
T  41165865 ctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  | || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 7850090 - 7850190
Alignment:
Q  84 atctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||||||| |||||||  |||||| | || |||| || || ||||||||  ||||||||| ||||||| ||||| ||| ||||  |||| |||||||||||    
T  7850090 atctcaattcaacaatcacttagcaaaatttcatcacttgagcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatc 7850189  T
Q  184 a 184  Q
    |    
T  7850190 a 7850190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 18276501 - 18276541
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaa 101  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  18276501 aacatcaattgaacatgaatctcatcacaattcaacaacaa 18276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 16821147 - 16821474
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16821147 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 16821246  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||||    
T  16821247 acttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 16821346  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatga 289  Q
    | |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16821347 ttatgcatacaaacataacatcacagcaagagcacggatttgacataaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatga 16821446  T
Q  290 ttgtgataataactaacccccttacctt 317  Q
    ||||||||||||||||||||||||||||    
T  16821447 ttgtgataataactaacccccttacctt 16821474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 55316227 - 55316555
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| | |||||||    
T  55316227 atccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaacttaacaaca 55316326  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  55316327 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaat 55316426  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatg 288  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  55316427 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaattacatg 55316526  T
Q  289 attgtgataataactaacccccttacctt 317  Q
    ||||||||||||||||||||| |||||||    
T  55316527 attgtgataataactaacccctttacctt 55316555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 41270083 - 41270411
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| | |||||||    
T  41270083 atccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaacttaacaaca 41270182  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||| ||||||||||           |||||||    
T  41270183 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaat 41270282  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatg 288  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  41270283 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagtagatgcaaaaattacatg 41270382  T
Q  289 attgtgataataactaacccccttacctt 317  Q
    |||||||||||||||||||||||||||||    
T  41270383 attgtgataataactaacccccttacctt 41270411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 4 - 319
Target Start/End: Original strand, 15614845 - 15615170
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| ||| ||||| ||||| ||||    
T  15614845 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaacaataact 15614944  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc-----------atcaattca 192  Q
    ||| | ||||||||||||| ||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||           |||||||||    
T  15614945 tagca-aaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattca 15615043  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 292  Q
    ||| |||||| |||||| ||||| |||||||| ||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  15615044 tgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacatgatta 15615143  T
Q  293 tgataataactaacccccttaccttaa 319  Q
    ||||||  |||||||||||||||||||    
T  15615144 tgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 15936882 - 15936552
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| || || |||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  15936882 atccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaaca 15936783  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||| |||||||||||||||||||||||||           |||||||||    
T  15936782 acttatca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 15936684  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---aca 286  Q
    |||||| |||||||||| ||| ||||   ||||||||||||   |  |||||||||||||||||||||||||||||||||| |||||||||| |   |||    
T  15936683 tcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaaca 15936584  T
Q  287 tgattgtgataataactaacccccttacctta 318  Q
    ||||| | || ||||||||||||| |||||||    
T  15936583 tgattataatgataactaacccccatacctta 15936552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 13975977 - 13975793
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||  |||    
T  13975977 atccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaatgaca 13975878  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  13975877 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcat 13975793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 45860813 - 45860997
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||  |||    
T  45860813 atccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaatgaca 45860912  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  45860913 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcat 45860997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 15938724 - 15938394
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| || || |||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  15938724 atccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaaca 15938625  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||| |||||||||||||||||||||||||           |||||||||    
T  15938624 acttatca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 15938526  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---aca 286  Q
    |||||  |||||||||| ||| ||||   ||||||| ||||   |  |||||||||||||||||||||||||||||||||| |||||||||| |   |||    
T  15938525 tcatgattacaaacatatcattacagttggagcacgtatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaaca 15938426  T
Q  287 tgattgtgataataactaacccccttacctta 318  Q
    ||||| | || |||||||||||||||||||||    
T  15938425 tgattataatgataactaacccccttacctta 15938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 13955145 - 13954961
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||  |||    
T  13955145 atccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaatgaca 13955046  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||||||||||| ||||| ||||||||| |||||||| | ||||||||| ||||| ||||||||||| |||||||||||||    
T  13955045 acttaggagaaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcat 13954961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 14842816 - 14842633
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  14842816 atccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaaca 14842717  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||| | ||||||||||||| ||||||||  |||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  14842716 acttagca-aaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcat 14842633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 15859276 - 15859096
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | ||||| ||||||||||||    
T  15859276 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaattcaacaacaact 15859177  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | |||||||||||||||||||||||||||||||||    
T  15859176 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcat 15859096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 51158270 - 51158090
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||||||||    
T  51158270 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaact 51158171  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  51158170 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 51158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 61 - 317
Target Start/End: Complemental strand, 12264981 - 12264710
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | || |||| ||||| || | ||| ||||||||||||||||| |||||| |||    
T  12264981 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcatcaattaagtataat-ctcataacttaacatttatacatacttt 12264883  T
Q  160 gaa-catgtaatttcaccaacaa-----------tcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    ||| |||||||||||||| ||||           ||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||    
T  12264882 gaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatc 12264783  T
Q  248 aacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataactaacccccttacctt 317  Q
    ||||||||||||||||||||||| ||||||||||    ||||||||| |||||||||||||||||||||||||    
T  12264782 aacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 12264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 2049821 - 2049999
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||| |||||||||||||  ||||| ||||||||| ||||||||||    
T  2049821 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaattaacaacaact 2049920  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||| | ||||||||||||| ||||||||  ||| || ||| ||| |||||||||||||||||||||||||||||||||||    
T  2049921 tagca-aaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatc 2049999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 12030399 - 12030221
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| ||||| ||||| |||||  |||| ||||||||||||| |||||| || |||||| ||||| ||||    
T  12030399 catgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaattaacaataact 12030300  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||| | ||||||||||||| |||||||   ||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  12030299 tagca-aaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatc 12030221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 22275435 - 22275547
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat---tacatgattgtgataataacta 304  Q
    |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| |||||||||||   ||||||||| ||||||||||||    
T  22275435 catcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaatttgtacatgattatgataataacta 22275534  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  22275535 acccccttacctt 22275547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 13838905 - 13839085
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||| |||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||  |||| ||||||    
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | ||||||||||||||||||||||| |||||||    
T  13839005 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcat 13839085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 49232634 - 49232774
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  49232634 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 49232733  T
Q  280 a-at--tacatgattgtgataataactaacccccttacctt 317  Q
    | ||  ||||||||| |||||||||||||||||||||||||    
T  49232734 agattgtacatgattatgataataactaacccccttacctt 49232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 12902148 - 12902007
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || |||||||||||||||||||||||||||  ||  |||| ||||||||||||||||||||||||||||| ||||||||    
T  12902148 aatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttcatacaacatgagaaaatgcaa 12902049  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| |||| |||||||||||||||||||||    
T  12902048 aaattgaacatgattatgatgataactaacccccttacctta 12902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 18911191 - 18911332
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  18911191 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 18911290  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  18911291 aaattgtacatgattatgataataactaacccccttacctta 18911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 15468398 - 15468258
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||| |||||||||||||||||  ||  |||||||| ||||||||||||||||||||||||| ||||||||    
T  15468398 aatcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaacccattttcatacaacatgagaaaatgcaa 15468299  T
Q  280 aat---tacatgattgtgataataactaacccccttacctt 317  Q
    |||   ||||||||| |||||||||||||||||||||||||    
T  15468298 aatttgtacatgattatgataataactaacccccttacctt 15468258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 18897102 - 18896962
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| |||| |||    
T  18897102 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgagaaaatacaa 18897003  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctt 317  Q
    ||    ||||||||| |||||||||||||||||||||||||    
T  18897002 aacttgtacatgattatgataataactaacccccttacctt 18896962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 25058937 - 25059077
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  25058937 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 25059036  T
Q  280 aatta---catgattgtgataataactaacccccttacctt 317  Q
    || |    ||||||| |||||||||||||||||||||||||    
T  25059037 aaattgtgcatgattatgataataactaacccccttacctt 25059077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 1467769 - 1467657
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  1467769 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 1467670  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  1467669 acccccttacctt 1467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 17912733 - 17912554
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || ||||| |||||   |||||||| ||||||||||||||| | ||||| ||||| |||||     
T  17912733 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaattcaactacaaca 17912634  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||    ||||||| |||||| |||||||  |||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  17912633 ta--tcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcat 17912554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 12812071 - 12812179
Alignment:
Q  212 acagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataactaaccc 308  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||||||||| ||||| ||||||||| ||  ||||||||| ||||||||||||||||    
T  12812071 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaatatgagaaaatgcaaagattgtacatgattatgataataactaaccc 12812170  T
Q  309 ccttacctt 317  Q
    |||||||||    
T  12812171 ccttacctt 12812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 15857180 - 15857120
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 361  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15857180 actaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 5228535 - 5228651
Alignment:
Q  204 ataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataata 300  Q
    |||||||||||||||||||||||||||  ||  ||| |||||||||||||||||||||  ||||||| |||||||||| |   |||||||| |||| |||    
T  5228535 ataacatcacagcaagagcacgaatttagcaacaat-gttcatcaacccattttcataacacatgagaaaatgcaaaaattgaacatgattatgatgata 5228633  T
Q  301 actaacccccttacctta 318  Q
    ||||||||||||||||||    
T  5228634 actaacccccttacctta 5228651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 16744058 - 16743991
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttctcc 368  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16744058 actaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 19232104 - 19232169
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  19232104 actaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||| | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 54651656 - 54651796
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa 280  Q
    |||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||| ||||||||||||||||||||||||||||| || ||||||    
T  54651656 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaattgcaaa 54651755  T
Q  281 att---acatgattgtgataataactaacccccttacctta 318  Q
    | |   |||||||| |||| |  || |||||||||||||||    
T  54651756 aattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagct----ctagcttcactttagctcctatgcttct 366  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  286 atgattgtgataataactaacccc-cttaccttaattatctccaactattagctctagcttca 347  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 44229183 - 44229268
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 265  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  44229183 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaacccattttcatacaac 44229268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 47984661 - 47984763
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||  |||||||||||    
T  47984661 catgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaact 47984760  T
Q  104 tag 106  Q
    |||    
T  47984761 tag 47984763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 47993948 - 47994050
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||  |||||||||||    
T  47993948 catgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaact 47994047  T
Q  104 tag 106  Q
    |||    
T  47994048 tag 47994050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 48003235 - 48003337
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||  |||||||||||    
T  48003235 catgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaact 48003334  T
Q  104 tag 106  Q
    |||    
T  48003335 tag 48003337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 48012521 - 48012623
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||  |||||||||||    
T  48012521 catgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaact 48012620  T
Q  104 tag 106  Q
    |||    
T  48012621 tag 48012623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 16744262 - 16744187
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  ||||||||||||||| || ||||||||| ||||||||||||    
T  16744262 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcat 16744187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 2449385 - 2449310
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  2449385 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 2449310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 11986362 - 11986238
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata--tt 158  Q
    ||||||||| ||||||||||||||| ||   ||||||||||||||| | |||||||| | || ||||||||  ||||||||| |||||  ||||||  ||    
T  11986362 aacatcaatggaacatgaatcacatatcttttcaacaacaacttagca-aaattcactatttgagcacaat-ttcataacttgacattaatacatacttt 11986265  T
Q  159 tgaacatgtaatttcaccaacaatcat 185  Q
      |||||||||||||| | ||||||||    
T  11986264 aaaacatgtaatttcaaccacaatcat 11986238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  304 aacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 8268683 - 8268650
Alignment:
Q  285 catgattgtgataataactaacccccttacctta 318  Q
    ||||||| ||||||||||||||||||||||||||    
T  8268683 catgattatgataataactaacccccttacctta 8268650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 8275783 - 8275750
Alignment:
Q  285 catgattgtgataataactaacccccttacctta 318  Q
    ||||||| ||||||||||||||||||||||||||    
T  8275783 catgattatgataataactaacccccttacctta 8275750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 11638424 - 11638465
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  11638424 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 11638465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 12030212 - 12030163
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||||||||||| |||||||||| ||||||||   ||||||||||||    
T  12030212 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 12030163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 13839092 - 13839141
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||||||||||| |||||||||| ||||||||   ||||||||||||    
T  13839092 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 13839141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 38810925 - 38810868
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||| ||||| |||| |  |||| | |||||||||||||||||||    
T  38810925 ctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 15876135 - 15876179
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaactta 105  Q
    |||||||||||||||||||||  ||| ||| ||||||||||||||    
T  15876135 aacatcaattgaacatgaatcttatcacaattcaacaacaactta 15876179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 16880188 - 16880256
Alignment:
Q  59 ataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagca 127  Q
    |||||||||||||||||||||||  ||| ||| ||||||||||| ||| | || ||||| |||| ||||    
T  16880188 ataacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttcacaaattgagca 16880256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 54651529 - 54651639
Alignment:
Q  65 tcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-tttg-aa 162  Q
    ||||| |||||||||| ||||||||  ||||||||||| ||  | ||||||||||||| || | |||  |||||||||||||||| |||||| |||| ||    
T  54651529 tcaatggaacatgaattacatctcatttcaacaacaacatatca-aaattcaccaattgagtataat-ttcataacttaacatttatacatactttgcaa 54651626  T
Q  163 catgtaatttcac 175  Q
    |||| ||||||||    
T  54651627 catgcaatttcac 54651639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 13572684 - 13573013
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||||    
T  13572684 atccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacaaca 13572783  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||           |||||||||    
T  13572784 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaat 13572883  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatg 288  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13572884 tcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaattacatg 13572983  T
Q  289 attgtgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||||||||||    
T  13572984 attgtgataataactaacccccttacctta 13573013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 13911269 - 13910939
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13911269 atccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 13911170  T
Q  101 ac-ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaa 188  Q
    || |||||||||||||||||||| |||| |||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           ||||||    
T  13911169 actttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaa 13911070  T
Q  189 ttcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--aca 286  Q
    ||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||||| | ||||||||||  |||    
T  13911069 ttcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagaatatgcaaaattacaca 13910970  T
Q  287 tgattgtgataataactaacccccttacctt 317  Q
    ||||| ||||||| | |||||||||||||||    
T  13910969 tgattatgataatcaataacccccttacctt 13910939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 10989418 - 10989746
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||  ||||||    
T  10989418 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat-tacaaca 10989516  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  10989517 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaat 10989616  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat--tacat 287  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||| | |||||||||  |||||    
T  10989617 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgatttgttcatcaacccattttcatacaacatgagaatatgcaaaattatacat 10989716  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| ||||||| |||||||||| ||||||    
T  10989717 gattatgataatcactaacccccatacctt 10989746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 2437465 - 2437794
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| || |||||||    
T  2437465 atccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcaaatctcatattaacaaca 2437564  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||| ||||||||||||| | ||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  2437565 acttaggaaaaattcaccaattgaacacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaat 2437664  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat--tacat 287  Q
    |||||| |||||||||||||||||| |||||||||||||||  || ||||||||||| | ||||||||||||||||||||| |||||||||||  |||||    
T  2437665 tcatgcatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcattatcccattttcatacaacatgagaaaatgcaaaattgtacat 2437764  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| |||||||||||||||||||||||||    
T  2437765 gattatgataataactaacccccttacctt 2437794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 16479205 - 16478879
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||| | |||||||||  | || |||||||||||   |||||||||||||| || |||||| ||||||||| || || |    
T  16479205 atccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaaaaata 16479106  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------caat 189  Q
    |||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||           ||||    
T  16479105 acttaaca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 16479007  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatga 289  Q
    |||||| ||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  16479006 tcatgcatacaaacataacatcgcagtaagagcacgaatctaacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattaaatga 16478907  T
Q  290 ttgtgataataactaacccccttacctt 317  Q
    || ||||||| |||||||||||||||||    
T  16478906 ttatgataatcactaacccccttacctt 16478879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 18254090 - 18253760
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| || || |||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  18254090 atccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaaca 18253991  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||| |||||||||||||||||||||||||           |||||||||    
T  18253990 acttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 18253892  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---aca 286  Q
    |||||| |||||||||| ||| ||||   ||||||||||||   |  |||||||||||||||||||||||||||||||||| |||||||||| |   |||    
T  18253891 tcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaaca 18253792  T
Q  287 tgattgtgataataactaacccccttacctta 318  Q
    ||||| | || |||||||||||||||||||||    
T  18253791 tgattataatgataactaacccccttacctta 18253760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 25292593 - 25292410
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||| |||    
T  25292593 atccatgaatatgcaaacccaagcaattattcattagtcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacgaca 25292494  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    || |||||| |||||||||||| ||||||||| ||||| |||| | ||||||||||||| |||||||||||||||||||||||||    
T  25292493 acctaggag-aattcaccaattgagcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcat 25292410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 16211777 - 16212013
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| | ||||||| || || ||||| |||||  ||||||||||||| |||| |||||| ||||||||| ||||||||||    
T  16211777 catgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaattaacaacaact 16211876  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc-----------atcaattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||| |||||||| |||||||           |||||||||    
T  16211877 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattca 16211975  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||| ||||||||   ||||||||||||    
T  16211976 tgcatacaaacatatcatcacagttggagcacgaattt 16212013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 36052678 - 36052855
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||||||||||||| || || ||||| |||||  || ||||||||||||||| |||||| ||||||||| ||||||   |    
T  36052678 catgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaattaacaac---t 36052774  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  36052775 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcat 36052855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 47481283 - 47481047
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| ||| |   ||||||||||||||||| |||||| | ||||| ||||||||||||    
T  47481283 catgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaattcaacaacaact 47481184  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | ||||||||||||| | ||||||  ||| |||||| ||||||||||||||||||||||||||||||| ||||           ||||||||||||    
T  47481183 tagca-aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattca 47481085  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||||||||||||  |||||||||||||    
T  47481084 tgcatacaaacataacatcacagttagagcacgaattt 47481047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 359
Target Start/End: Original strand, 3059977 - 3060344
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| ||||| ||||||||||||||||||| |||||| | |||||   ||||||||||    
T  3059977 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 3060076  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||  | |||||||||| || |||| |||  ||| || ||| ||||||||||||||||||||||||||||||||||||           |||||||||| |    
T  3060077 taaca-aaattcaccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaa 3060175  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaa--tgcaaaatta-catga 289  Q
    ||| |||||| |||  |||||||   ||||||||||||  ||  |||| | ||| || | |  |||||| |||||  | |||  | |||||| |  ||||    
T  3060176 tgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccat-aagcaaaattcatataacatttgaaaatttacaaaatgatgatga 3060274  T
Q  290 ttgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    || ||||||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  3060275 ttatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 11580991 - 11580811
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | ||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||||||||    
T  11580991 catgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaact 11580892  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  11580891 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 11580811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 18980079 - 18979938
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  18980079 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 18979980  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  18979979 aaattgtacatgattatgataataactaacccccttacctta 18979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 13321025 - 13321263
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaa-caac 102  Q
    ||||||| ||||||||||||  || |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| ||||||| ||||    
T  13321025 catgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaatcaac 13321124  T
Q  103 ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-tttg-aacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||| | ||||||||||||| ||||||||  ||||||||| |||||| |||||| |||| ||||||||||||||||||||           |||||||||    
T  13321125 ttagca-aaattcaccaattgagcacaat-ttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaat 13321222  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    |||||| |||||||||||||||||||  |||||||||||||    
T  13321223 tcatgcatacaaacataacatcacagttagagcacgaattt 13321263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 15950849 - 15950709
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  15950849 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 15950750  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctt 317  Q
    ||    ||||||||| |||||||||||||||||||||||||    
T  15950749 aaattgtacatgattatgataataactaacccccttacctt 15950709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 13037266 - 13037086
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| ||| ||||||||||| ||||||||| |||||| | |||||   ||||||||||    
T  13037266 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatctaacaacaact 13037167  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||| ||||||| ||||||||||    
T  13037166 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcat 13037086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 15760172 - 15760031
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  15760172 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaa 15760073  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| |||| |||||||||||||||||||||    
T  15760072 aaattgaacatgattatgatgataactaacccccttacctta 15760031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 7822954 - 7823066
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  7822954 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 7823053  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  7823054 acccccttacctt 7823066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 7830265 - 7830377
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  7830265 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 7830364  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  7830365 acccccttacctt 7830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 27101667 - 27101555
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  27101667 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 27101568  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  27101567 acccccttacctt 27101555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 27109015 - 27108903
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  27109015 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 27108916  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  27108915 acccccttacctt 27108903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 27176659 - 27176771
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  27176659 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 27176758  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  27176759 acccccttacctt 27176771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 38783759 - 38783647
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  38783759 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 38783660  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  38783659 acccccttacctt 38783647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 13758568 - 13758709
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||| ||||||||    
T  13758568 aatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 13758667  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  13758668 aaattgtacatgattatgataataactaacccccttacctta 13758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 15927766 - 15927907
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  ||||| ||||||| |||||||||||||||||||| ||||||||    
T  15927766 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttcatacaacatgagaaaatgcaa 15927865  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  15927866 aaattgtacatgattatgataataactaacccccttacctta 15927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 14250956 - 14250815
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||| ||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  14250956 aatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 14250857  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    ||     ||||||||  ||| |||||||||||||||||||||    
T  14250856 aaaatgaacatgattacgatgataactaacccccttacctta 14250815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 15862174 - 15862258
Alignment:
Q  237 aattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataactaacccccttacctta 318  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||||||||||||||||||    
T  15862174 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataataactaacccccttacctta 15862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 16418731 - 16418798
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  16418731 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatt 16418798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 10000392 - 10000325
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt 283  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | ||||||||||    
T  10000392 caagagcacgaatttgacataaattgttcatcaacccatttttatacaacatgagaagatgcaaaatt 10000325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 7293025 - 7293207
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||| | ||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |||||||||    
T  7293025 atccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacaaca 7293124  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    || |  |  ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  7293125 acat--gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 7293207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 48622724 - 48622623
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||| ||||||||||||||  ||| |||||||||||||||||||||| || |||||||| ||||||||    
T  48622724 aatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcgtaaaacatgagaaaatgcaa 48622625  T
Q  280 aa 281  Q
    ||    
T  48622624 aa 48622623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||| | ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 366
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  287 tgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||||| |||| | ||||||||||||||||||||||||| |||| ||||| ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 11516343 - 11516418
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  11516343 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 11516418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 15441711 - 15441636
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  15441711 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 15441636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 30262276 - 30262201
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  30262276 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 30262201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 13377867 - 13377924
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  13377867 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 17223846 - 17223796
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcacttta 352  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  17223846 ctaacccccttaccttaattatcaccaattcttagcccaagcttcacttta 17223796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 296087 - 296038
Alignment:
Q  136 ataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||  |||||||||||| || |||||| ||||||||||||||||||    
T  296087 ataacttctcatttttacataattcaacatgaaatttcaccaacaatcat 296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 9723987 - 9723946
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  9723987 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 9723946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 46474068 - 46474109
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  46474068 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 46474109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  303 taacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||| |||||||||| |||| |  |||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 27009849 - 27010178
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||||    
T  27009849 atccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacaaca 27009948  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||           |||||||||    
T  27009949 acttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaat 27010048  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatg 288  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27010049 tcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaattacatg 27010148  T
Q  289 attgtgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||||||||||    
T  27010149 attgtgataataactaacccccttacctta 27010178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 18778236 - 18777907
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  18778236 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaattaacaaca 18778137  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  18778136 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 18778037  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||    
T  18778036 tcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacacat 18777937  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| ||||||| |||||||||||||||||    
T  18777936 gattatgataatcactaacccccttacctt 18777907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 25426636 - 25426965
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  25426636 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 25426735  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    ||||||||||||||||||| |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  25426736 acttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 25426835  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||    
T  25426836 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacacat 25426935  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| ||||||| |||||||||||||||||    
T  25426936 gattatgataatcactaacccccttacctt 25426965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 12382 - 12711
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  12382 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 12481  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    ||||||||||||||||||| |||||||||||  |||||||||| || |||| ||||| ||||||||||||||||||||||||           |||||||    
T  12482 acttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 12581  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||| |||||||  ||||    
T  12582 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatacaaaattacacat 12681  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| |||||||||||||||||||||||||    
T  12682 gattatgataataactaacccccttacctt 12711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 22366725 - 22366396
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| ||||||| |||||||    
T  22366725 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaattaacaaca 22366626  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  22366625 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 22366526  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||    
T  22366525 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgctcatcaacccattttcatacaacatgagaaaatgcaaaattacacat 22366426  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| ||||||| |||||||||||||||||    
T  22366425 gattatgataatcactaacccccttacctt 22366396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 43443639 - 43443312
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  43443639 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagactcacatctcaaatcaacaaca 43443540  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||| ||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  43443539 acttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaat 43443440  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatga 289  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| | ||||||    ||||||    
T  43443439 tcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaatccattttcatataacatgagaatatgcaattacacatga 43443340  T
Q  290 ttgtgataataactaacccccttacctt 317  Q
    || ||||||| |||||||||||||||||    
T  43443339 ttatgataatcactaacccccttacctt 43443312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 3 - 317
Target Start/End: Complemental strand, 4200227 - 4199900
Alignment:
Q  3 ccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200227 ccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaac 4200128  T
Q  103 ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaattc 191  Q
     || ||||||||||||||||||||| |||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||||    
T  4200127 ataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattc 4200028  T
Q  192 atgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acatga 289  Q
    |||| |||||||||||||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||||||||||| | ||||||||||  ||||||    
T  4200027 atgcatacaaacataacatcacaacaagagcacgaatttagcatgaattattcatcaactcattttcatacaacatgagaatatgcaaaattacacatga 4199928  T
Q  290 ttgtgataataactaacccccttacctt 317  Q
    || |||||||  ||||||||||||||||    
T  4199927 ttatgataatccctaacccccttacctt 4199900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 19499907 - 19500236
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  19499907 atccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 19500006  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    ||||||||||||||||||| |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  19500007 acttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 19500106  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||||    
T  19500107 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaagtgttcatcaacccattttcatacaacatgagaaaatgcaaaattacacat 19500206  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| ||||||| |||||||||||||||||    
T  19500207 gattatgataatcactaacccccttacctt 19500236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 21073839 - 21073510
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||| |||||||    
T  21073839 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaattaacaaca 21073740  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||| |||||||||||| |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||| ||    
T  21073739 acttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccat 21073640  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||    
T  21073639 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcattaacccattttcatacaacatgagaaaatgcaaaattacacat 21073540  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| |||||||||||||||||||||||||    
T  21073539 gattatgataataactaacccccttacctt 21073510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 45 - 317
Target Start/End: Complemental strand, 29188483 - 29188201
Alignment:
Q  45 atcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaa 144  Q
    ||||| |||||  ||||||||||||||| || |||||| ||||||||| ||||| ||||||| | ||||||||||||| ||||| ||  ||| ||||||     
T  29188483 atcaattaacaaccataacatcaattgagcaagaatcaaatctcaaattaacaataacttagca-aaattcaccaattgagcaccattttcacaacttat 29188385  T
Q  145 catttttacatatttgaacatgtaatttcaccaacaatcat-----------caattcatgcctacaaacataacatcacagcaagagcacgaatttgac 233  Q
    |||||||||||||||||||||||||||||||||||||||||           |||||||||| ||||||||||||||||||| |||||||||||| |  |    
T  29188384 catttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagc 29188285  T
Q  234 atgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattgtgataataactaacccccttacctt 317  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| | ||||| |||||||||||||||||    
T  29188284 atgaattgttcatcgacccattttcatacaacatgagaaaatgcaaaattacatgattataataatcactaacccccttacctt 29188201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 23506976 - 23507156
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||||||||||||| || || ||||| |||||  |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  23506976 catgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaact 23507075  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23507076 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 23507156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 22054085 - 22053905
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | ||||||||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| ||||||||||||    
T  22054085 catgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaacaact 22053986  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  22053985 tagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 22053905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 318
Target Start/End: Complemental strand, 35791287 - 35791015
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | || |||| ||||| || | ||| ||||||||||||||||| |||||| |||    
T  35791287 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcatcaattaagtataat-ctcataacttaacatttatacatacttt 35791189  T
Q  160 gaa-catgtaatttcaccaacaa-----------tcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    ||| |||||||||||||  ||||           ||||||||||||||  |  || |||||||||||||||||||||||||||  ||  |||||||||||    
T  35791188 gaaacatgtaatttcactcacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatc 35791089  T
Q  248 aacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||||||||||||||||||    
T  35791088 aacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctta 35791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 18531319 - 18531139
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | |||| |||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| ||||||||||||    
T  18531319 catgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaacaact 18531220  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| | ||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18531219 tagca-aaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 18531139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 61 - 317
Target Start/End: Complemental strand, 11212253 - 11211983
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| | || || | |||  |||||||||||||||| |||| | |||    
T  11212253 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatta-aaattcactacttgagtataatt-tcataacttaacatttatacacacttt 11212156  T
Q  160 gaa-catgtaatttcaccaacaa-----------tcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    ||| |||||||||||||| ||||           ||||||||||||||  |  || ||| |||||||||||||||||||||||  || ||||||||||||    
T  11212155 gaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatc 11212056  T
Q  248 aacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacctt 317  Q
    ||||||||||||||||||||||| |||||||||| |   |||||||| |||||||||||||||||||||||||    
T  11212055 aacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgataataactaacccccttacctt 11211983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 7425546 - 7425663
Alignment:
Q  204 ataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataata 300  Q
    |||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||||    ||||||||| ||||||||    
T  7425546 ataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataata 7425645  T
Q  301 actaacccccttacctta 318  Q
    ||||||||||||||||||    
T  7425646 actaacccccttacctta 7425663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 17471646 - 17471506
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| |||| |||    
T  17471646 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgagaaaatacaa 17471547  T
Q  280 aat---tacatgattgtgataataactaacccccttacctt 317  Q
    |||   ||||||||| |||||||||||||||||||||||||    
T  17471546 aatttgtacatgattatgataataactaacccccttacctt 17471506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 27182799 - 27182619
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| || |||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||||||||    
T  27182799 catgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaact 27182700  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||| ||||||||||    
T  27182699 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcat 27182619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 23514759 - 23514900
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  23514759 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 23514858  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| |||| |||||||||||||||||||||    
T  23514859 aaattgaacatgattatgatgataactaacccccttacctta 23514900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 21932411 - 21932299
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  21932411 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 21932312  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  21932311 acccccttacctt 21932299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 21938581 - 21938469
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  21938581 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 21938482  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  21938481 acccccttacctt 21938469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 35582262 - 35582374
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  35582262 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 35582361  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  35582362 acccccttacctt 35582374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 1219550 - 1219437
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataacta 304  Q
    |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||||    ||||||||| ||||||| ||||    
T  1219550 catcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataatcacta 1219451  T
Q  305 acccccttacctta 318  Q
    ||||||||||||||    
T  1219450 acccccttacctta 1219437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 10778028 - 10777888
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  10778028 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 10777929  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctt 317  Q
    ||    ||||||||| ||||||| |||| ||||||||||||    
T  10777928 aaattgtacatgattatgataatcactaccccccttacctt 10777888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 23328791 - 23328896
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  23328791 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 23328890  T
Q  313 acctta 318  Q
    ||||||    
T  23328891 acctta 23328896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 24616395 - 24616500
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  24616395 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24616494  T
Q  313 acctta 318  Q
    ||||||    
T  24616495 acctta 24616500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 24712771 - 24712876
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  24712771 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24712870  T
Q  313 acctta 318  Q
    ||||||    
T  24712871 acctta 24712876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 24745789 - 24745894
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  24745789 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24745888  T
Q  313 acctta 318  Q
    ||||||    
T  24745889 acctta 24745894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 34939289 - 34939524
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || ||||| |||||   |||||||||| |||||| |||||| | ||||| ||| |||  |||    
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | |||| || ||||| ||||||||  ||||||||| ||||||||||||| |||||||||| ||||||||||||           ||||||||||||    
T  34939388 tagca-aaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 34939486  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||||||||||||  |||||||||||||    
T  34939487 tgcatacaaacataacatcacagttagagcacgaattt 34939524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 22883114 - 22883006
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||| ||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  22883114 catcacagcaagagcacaaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 22883015  T
Q  305 accccctta 313  Q
    |||||||||    
T  22883014 accccctta 22883006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 36989800 - 36989688
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||| ||||||||||||| |||  ||||||||| |||||||||||||||||||||||| || |||||| ||  ||||||||| ||||||||||||    
T  36989800 catcacagctagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaattgcaaagattgtacatgattatgataataacta 36989701  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  36989700 acccccttacctt 36989688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 11584389 - 11584448
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 361  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  11584389 ctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 20623085 - 20623160
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  20623085 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 20623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 21233675 - 21233600
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  21233675 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 21233600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 16536313 - 16536388
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  16536313 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 16536388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 32950761 - 32950886
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataac-ttaacatttttacata-tt 158  Q
    ||||||||| ||||||||||||||||||   ||||||||||| ||| | |||||||||| || ||||||||  ||||||| || || ||| |||||| ||    
T  32950761 aacatcaatggaacatgaatcacatctcttttcaacaacaacatagta-aaattcaccatttgagcacaat-ttcataactttgacctttatacatactt 32950858  T
Q  159 tg-aacatgtaatttcaccaacaatcat 185  Q
    || |||||||||||||| | ||||||||    
T  32950859 tgaaacatgtaatttcaaccacaatcat 32950886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 19862547 - 19862604
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| | |||||   | |||||||||||||||||    
T  19862547 ctaacccccttaccttaattatcaccaatttttagcctaaacttcactttagctccta 19862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||| ||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 21617083 - 21617124
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  21617083 aacatcaattgaacatgaatctcatcacaattcaacaacaac 21617124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 5 - 317
Target Start/End: Complemental strand, 21852205 - 21851881
Alignment:
Q  5 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaactt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  21852205 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacatctcaaattaacaacaactt 21852106  T
Q  105 aggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattcat 193  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||||||           ||||||||||||    
T  21852105 aggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcat 21852006  T
Q  194 gcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatgattg 292  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  21852005 gcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaattacatgattg 21851906  T
Q  293 tgataataactaacccccttacctt 317  Q
    |||||||||||||||||||||||||    
T  21851905 tgataataactaacccccttacctt 21851881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 5 - 315
Target Start/End: Complemental strand, 21844812 - 21844490
Alignment:
Q  5 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaactt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| |||||||||||    
T  21844812 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaaaaatcacatctcaaattaacaacaactt 21844713  T
Q  105 aggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattcat 193  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||           ||||||||||||    
T  21844712 aggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcat 21844613  T
Q  194 gcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatgattg 292  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  21844612 gcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaattacatgattg 21844513  T
Q  293 tgataataactaacccccttacc 315  Q
    |||||||||||||||||||||||    
T  21844512 tgataataactaacccccttacc 21844490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 16674636 - 16674307
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| | |||||||    
T  16674636 atccatgaatatgcaaactcaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaacttaacaaca 16674537  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           ||| |||    
T  16674536 acttaggagaaattcaccaattaagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaat 16674437  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatg 288  Q
    |||||| || |||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  16674436 tcatgcataaaaacataacatcacagaaagagcacgaatttagcatgaattgttcaacaacccattttcatacaacatgagcaaatgcaaaaattacatg 16674337  T
Q  289 attgtgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||||||||||    
T  16674336 attgtgataataactaacccccttacctta 16674307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 5 - 317
Target Start/End: Original strand, 30120734 - 30121060
Alignment:
Q  5 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaactt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30120734 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaattaacaacaactt 30120833  T
Q  105 aggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaattcat 193  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           ||| |||||||    
T  30120834 aggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcat 30120933  T
Q  194 gcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgat 290  Q
    || ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||   || ||||| |   |||||||    
T  30120934 gcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagattatacaaaaattacacatgat 30121033  T
Q  291 tgtgataataactaacccccttacctt 317  Q
    | ||||||| |||||||||||||||||    
T  30121034 tatgataatcactaacccccttacctt 30121060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 4 - 318
Target Start/End: Original strand, 24548993 - 24549317
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| ||| ||||| ||||| ||||    
T  24548993 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaacaataact 24549092  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatca-----------tcaattca 192  Q
    ||| | ||||||||||||| ||||| ||  ||| |||||| ||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  24549093 tagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 24549191  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 292  Q
    ||| ||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  24549192 tgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacatgatta 24549291  T
Q  293 tgataataactaacccccttacctta 318  Q
    ||||||| ||||||||||||||||||    
T  24549292 tgataatcactaacccccttacctta 24549317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 4 - 317
Target Start/End: Complemental strand, 6774498 - 6774175
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || |||||||||||   |||||||||||||| || |||||| ||||||||| ||||| ||||    
T  6774498 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaacaataact 6774399  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------caattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  6774398 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 6774300  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 292  Q
    ||| ||||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  6774299 tgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatataacatgagaaaatgcaaaattacatgatta 6774200  T
Q  293 tgataataactaacccccttacctt 317  Q
    ||||||| |||||||||||||||||    
T  6774199 tgataatcactaacccccttacctt 6774175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 222935 - 222754
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  222935 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 222836  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 182  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  222835 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 736558 - 736377
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  736558 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 736459  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 182  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  736458 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 860453 - 860272
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  860453 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 860354  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 182  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  860353 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 43373720 - 43373540
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||||||||||||| || || ||||| |||||  |||| ||||||||||||| |||||| ||||||||| ||||||||||    
T  43373720 catgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaattaacaacaact 43373621  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  43373620 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 43373540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 16193968 - 16193788
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| ||||||||| |||||||| |    
T  16193968 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaa-t 16193870  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    | ||  ||||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  16193869 ttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcat 16193788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 318
Target Start/End: Original strand, 16195298 - 16195570
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | || ||||  |||| || | ||| ||||||||||||||||| |||||| |||    
T  16195298 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcataaattaagtataat-ctcataacttaacatttatacatacttt 16195396  T
Q  160 gaa-catgtaatttcaccaacaa-----------tcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    ||| |||||||||||||| ||||           ||||||||||||||  |  |||||| |||||||||| ||| ||||||||  ||  |||||||||||    
T  16195397 gaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaattgttcatc 16195496  T
Q  248 aacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||| ||||||||||    ||||||||| ||||||||| ||||||||||||||||    
T  16195497 aacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataattaacccccttacctta 16195570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 366
Target Start/End: Complemental strand, 16405224 - 16404852
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    ||||||| |||| ||||||||| | |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| || |||| | ||||||   |    
T  16405224 catgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatttaacaac---t 16405128  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------caattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| |||||||||||| | | |||||||||||||||||||||||||||||||           |||||||    
T  16405127 tagca-aaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 16405029  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccatt-ttcatacaacatgagcaaatgcaaaattac--atga 289  Q
    ||| |||||||||| ||||||||   ||||||||||||  ||  |||| | |||||  | |   ||||||||||||  | ||||  | || ||   ||||    
T  16405028 tgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttacaaataatgatga 16404929  T
Q  290 ttgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    || |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  16404928 ttatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 22006316 - 22006176
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  22006316 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 22006217  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctt 317  Q
    ||    ||||||||| |||||||||||||||||||||||||    
T  22006216 aaattgtacatgattatgataataactaacccccttacctt 22006176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 24929043 - 24928863
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||||| || ||||| |||||  |||||| ||||||||||| ||  || | |||||  |||| ||||||    
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||  |||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  24928943 tagc-gaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 24928863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 13720986 - 13720845
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  13720986 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 13720887  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  13720886 aaattgtacatgattatgataataactaacccccttacctta 13720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 271390 - 271278
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  271390 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 271291  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  271290 acccccttacctt 271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 644530 - 644642
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  644530 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 644629  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  644630 acccccttacctt 644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 830265 - 830377
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  830265 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 830364  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  830365 acccccttacctt 830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 15319188 - 15319077
Alignment:
Q  209 atcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataactaa 305  Q
    |||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| |||||||||||||    
T  15319188 atcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaa 15319089  T
Q  306 cccccttacctt 317  Q
    ||||||||||||    
T  15319088 cccccttacctt 15319077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 15499557 - 15499446
Alignment:
Q  209 atcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataactaa 305  Q
    |||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| |||||||||||||    
T  15499557 atcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaa 15499458  T
Q  306 cccccttacctt 317  Q
    ||||||||||||    
T  15499457 cccccttacctt 15499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 13662295 - 13662182
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataacta 304  Q
    |||||||||||||||||||||||  ||  ||||||| |||||||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||||    
T  13662295 catcacagcaagagcacgaatttagcaacaattgtttatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 13662196  T
Q  305 acccccttacctta 318  Q
    ||||||||||||||    
T  13662195 acccccttacctta 13662182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 16873109 - 16872968
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||| ||||||||    
T  16873109 aatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 16873010  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  16873009 aaattgtacatgattatgataataactaacccccttacctta 16872968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 22088824 - 22088712
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||| ||||||||||||||||||| ||||||||| ||  ||||||||| |||| |||||||    
T  22088824 catcacagcaagagcacgaatttaacaacaattgttcaccaacacattttcatacaacatgagaaaatgcaaagattgtacatgattatgatgataacta 22088725  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  22088724 acccccttacctt 22088712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 17345581 - 17345816
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || ||||| |||||   |||| ||||| |||||| |||||| | ||||| ||| ||| ||||    
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | |||| || ||||| ||||||||  ||||||||| ||||||||||||| |||||||||| ||||||||||||           ||||||||||||    
T  17345680 tagca-aaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 17345778  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| || ||||||||||||||||  |||||||||||||    
T  17345779 tgcatataaacataacatcacagttagagcacgaattt 17345816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 22907468 - 22907286
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||| | ||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| ||||| |||    
T  22907468 atccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactaca 22907369  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    || |  |  ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  22907368 acat--gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 22907286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||| | ||||||| ||||||||||||||||  |||||||||||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 691970 - 691909
Alignment:
Q  121 tttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 182  Q
    |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  691970 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 5238203 - 5238278
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  5238203 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 5238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 24661395 - 24661320
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  24661395 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 24661320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 43685662 - 43685737
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  43685662 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 43685737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 5854681 - 5854722
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  5854681 aacatcaattgaacatgaatctcatcacaattcaacaacaac 5854722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  || | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    |||||||||||| |||||||||| |||| |  |||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 22497389 - 22497348
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  22497389 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 22497348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 38533716 - 38533757
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  38533716 aacatcaattgaacatgaatctcatcacaattcaacaacaac 38533757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 235; Significance: 1e-130; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 43005 - 43333
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  43005 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaattaacaaca 43104  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||           |||||||||    
T  43105 acttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 43204  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgag-caaatgcaaaattacatg 288  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||    
T  43205 tcatgcatagaaacataacatcccagcaagagcacgaatttgacatgaattgctcatcaacccattttcatacaacatgagaaaaatgcaaaattacatg 43304  T
Q  289 attgtgataataactaacccccttacctt 317  Q
     |||||||| |||||||||||||||||||    
T  43305 tttgtgatagtaactaacccccttacctt 43333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 39329 - 39441
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  39329 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 39428  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  39429 acccccttacctt 39441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 228; Significance: 1e-126; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 4 - 318
Target Start/End: Original strand, 46 - 370
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||    
T  46 catgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacaacaact 145  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||           ||||||||||||    
T  146 taggagaaattcaccaattgagcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattca 245  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 292  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||     
T  246 tgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatataacatgagc-aatgcaaaattacatgattt 344  T
Q  293 tgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||||||    
T  345 tgataataactaacccccttacctta 370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||| | || |||||||||||||||||||||| |||| ||||| ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 226; Significance: 1e-124; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 64772 - 64438
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||||    
T  64772 atccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacaaca 64673  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat--------------- 185  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||                   
T  64672 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaat 64573  T
Q  186 -caattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaatt 283  Q
      ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  64572 ataattcatgcatataaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaatt 64473  T
Q  284 acatgattgtgataataactaacccccttacctta 318  Q
    |||||||||||||||||||||||||||||||||||    
T  64472 acatgattgtgataataactaacccccttacctta 64438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 107755 - 108085
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  107755 atccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaaca 107854  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||  | ||||||||||||| ||||||||  | | |||||| ||||||| || |||||||||||||||||||||||||           |||||||||    
T  107855 acttatca-aaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 107953  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---aca 286  Q
    |||||| |||||||||| ||| ||||   ||||||||||||   |  |||||||||||||||||||||||||||||||||| |||||||||| |   |||    
T  107954 tcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgaaca 108053  T
Q  287 tgattgtgataataactaacccccttacctta 318  Q
    ||||| | || |||||||||||||||||||||    
T  108054 tgattataatgataactaacccccttacctta 108085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 19886905 - 19886576
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  19886905 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 19886806  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    ||||||||||||||||||| |||||||||||  |||||||||| || |||| ||||| ||||||||||||||||||||||||           |||||||    
T  19886805 acttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 19886706  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||    
T  19886705 tcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacacat 19886606  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| |||||||||||||||||||||||||    
T  19886605 gattatgataataactaacccccttacctt 19886576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 17396908 - 17396724
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||  |||    
T  17396908 atccatgaatatgcaaacccaagcaattatccattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaatgaca 17396809  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  17396808 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcat 17396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 366
Target Start/End: Complemental strand, 19794959 - 19794581
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||| |||||||||  |||| ||||| ||||    ||||||||||||||||| |||||| | ||||| |||||||||    
T  19794959 atccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaattcaacaaca 19794860  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc-----------atcaat 189  Q
    |||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||           ||||||    
T  19794859 acttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaat 19794761  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatca-acccattttcatacaacatgagcaa-atgcaaaatta-ca 286  Q
    |||||| |||||||||| ||||||||   |||||||||||| ||   |||| | ||| |  |  |  ||||||||||||  | ||  | |||||| |  |    
T  19794760 tcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttgaaatttacaaaataatga 19794661  T
Q  287 tgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  19794660 tgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 366
Target Start/End: Complemental strand, 20627565 - 20627190
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    ||||||||| || ||||||||||| ||||||||| || || | ||| |||||  ||||| |||||||||||| |||| | ||||||||| ||||||||||    
T  20627565 catgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaattaacaacaact 20627466  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattca 192  Q
    ||  | ||||||||||||| ||||||||  ||| || ||| |||||||||||||||| ||||||||||||||||||||           ||||||||||     
T  20627465 taaca-aaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcg 20627367  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaa---tgcaaaatta-catg 288  Q
    ||| |||||||||| ||||||||   |||||||||||| |||  |||| | ||| || |    ||||||||| ||  | |||   | |||||| |  |||    
T  20627366 tgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccat-aatcataattcatacaatatttgaaaattttacaaaatgatgatg 20627268  T
Q  289 attgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||| ||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  20627267 attatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 462749 - 462927
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||||||  | ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||||||||    
T  462749 catgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaact 462848  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||| | ||||||||||||| | ||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  462849 tagca-aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 462927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 24341641 - 24341461
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | ||||||||||| |||||||||    || ||||| |||||   |||||||||||||||||||||||| ||||||| ||||||||||||    
T  24341641 catgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaact 24341542  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  24341541 tagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcat 24341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 36982693 - 36982515
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||| |||| |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| | ||||| ||||||||||||    
T  36982693 catgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaattcaacaacaact 36982594  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    | | | ||||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  36982593 tggca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatc 36982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 7508099 - 7507916
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaa-catgaatcacatctcaaatcaacaac 99  Q
    ||||||||||||||| ||||||||| | |||||||||  | || |||||||||||   |||||||||||| || ||||||||| ||||||| | ||||||    
T  7508099 atccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaatt-aacaac 7508001  T
Q  100 aacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||   ||||||||||||| | ||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  7508000 aacttagcc-aaattcaccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcat 7507916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 12728590 - 12728731
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  12728590 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 12728689  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  12728690 aaattgtacatgattatgataataactaacccccttacctta 12728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 16935791 - 16935932
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  16935791 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 16935890  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  16935891 aaattgtacatgattatgataataactaacccccttacctta 16935932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 17006451 - 17006592
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  17006451 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 17006550  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  17006551 aaattgtacatgattatgataataactaacccccttacctta 17006592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 23778103 - 23777962
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    |||||||||||||||| ||  || ||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||    
T  23778103 aatcatcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaa 23778004  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| |||| |||||||||||| ||||||||    
T  23778003 aaattgaacatgattatgatgataactaacccctttacctta 23777962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 8891253 - 8891433
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| ||| |  |||||||||||||||||| |||||| | |||||   ||||||||||    
T  8891253 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatctaacaacaact 8891352  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | ||||||||||||||||||| |||||||||||    
T  8891353 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcat 8891433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 43643209 - 43643029
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || ||||| |||||   ||| ||||||||||||| |||||| ||||||||| || |||||||    
T  43643209 catgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaattaataacaact 43643110  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
     || | ||||||||||||| ||||||||  ||| |||||||||||| | | |||||||||||||||||||||||||||||||    
T  43643109 aagaa-aaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcat 43643029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 8944044 - 8944185
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  8944044 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 8944143  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  8944144 aaattgtacatgattatgataataactaacccccttacctta 8944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 34824673 - 34824814
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  34824673 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 34824772  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||| ||||||||||||||||||    
T  34824773 aaattgtacatgattatgataatcactaacccccttacctta 34824814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 11231368 - 11231256
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  11231368 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 11231269  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  11231268 acccccttacctt 11231256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 22513215 - 22513103
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  22513215 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 22513116  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  22513115 acccccttacctt 22513103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 24685811 - 24685699
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  24685811 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 24685712  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  24685711 acccccttacctt 24685699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 28775837 - 28775725
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  28775837 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 28775738  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  28775737 acccccttacctt 28775725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 3798661 - 3798520
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||| ||||||||    
T  3798661 aatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 3798562  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  3798561 aaattatacatgattatgataataactaacccccttacctta 3798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 12635926 - 12635785
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  ||||||||||||||| |||||||||||||||||| ||||||||    
T  12635926 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttcatacaacatgaggaaatgcaa 12635827  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  12635826 aaattgtacatgattatgataataactaacccccttacctta 12635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 12641700 - 12641559
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||| ||||||||    
T  12641700 aatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 12641601  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  12641600 aaattgtacatgattatgataataactaacccccttacctta 12641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 23774370 - 23774475
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||   || ||||| ||||||||||||||||||||    
T  23774370 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaacttgattatgataataactaaccccctt 23774469  T
Q  313 acctta 318  Q
    ||||||    
T  23774470 acctta 23774475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 25265642 - 25265406
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||| || |||||| ||  | || ||||| |||||   | |||||||||||||||||  || ||||  || |||||||||||     
T  25265642 catgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaaca 25265543  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||           |||||||||||    
T  25265542 tagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 25265444  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||||||||| ||  |||||||||||||    
T  25265443 tgcatacaaacataacatcaaagttagagcacgaattt 25265406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 42178027 - 42177886
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||| ||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  42178027 aatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 42177928  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  42177927 aaattgtacatgattatgataataactaacccccttacctta 42177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 22275061 - 22275125
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22275061 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 5888652 - 5888585
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  5888652 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatt 5888585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 43642913 - 43642833
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| ||||||  ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  43642913 atgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 366
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  287 tgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||||| ||||||  ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 21142121 - 21142178
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 265  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  21142121 catcacaacaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 21142178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 19689548 - 19689473
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  19689548 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 19689473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 23820187 - 23820262
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  23820187 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 23820262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 14906587 - 14906512
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  14906587 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 14906512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 20015127 - 20015201
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatca 184  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| |||||||||||    
T  20015127 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca 20015201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 16292981 - 16292940
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  16292981 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 16292940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  307 ccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    |||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 5072632 - 5072304
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| | |||||||    
T  5072632 atccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaacttaacaaca 5072533  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  5072532 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaat 5072433  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatg 288  Q
    |||||| || |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  5072432 tcatgcatataaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacttgagtaaatgcaaaaattacatg 5072333  T
Q  289 attgtgataataactaacccccttacctt 317  Q
    |||||||||||||||||||||||||||||    
T  5072332 attgtgataataactaacccccttacctt 5072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 18601362 - 18601052
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| | |||||||    
T  18601362 atccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaacttaacaaca 18601263  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  18601262 acttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaat 18601163  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattacatg 288  Q
    |||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18601162 tcatgcatacaaacataacatcacagcaagagcatgaatttagcatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaattacatg 18601063  T
Q  289 attgtgataat 299  Q
    |||||||||||    
T  18601062 attgtgataat 18601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 22227817 - 22228146
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  22227817 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaaca 22227916  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||| | ||||||| |||||   ||||||  |||||||||| ||||||||||||||||||||||||||||||| ||||           |||||||||    
T  22227917 acttagca-aaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaat 22228015  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttaca 286  Q
    ||||||  |  || |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||||    ||||    
T  22228016 tcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtaca 22228115  T
Q  287 tgattgtgataataactaacccccttacctt 317  Q
    ||||| |||||||||||||||||||||||||    
T  22228116 tgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 22232514 - 22232843
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  22232514 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaaca 22232613  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||| | ||||||| |||||   ||||||  |||||||||| ||||||||||||||||||||||||||||||| ||||           |||||||||    
T  22232614 acttagca-aaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaat 22232712  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttaca 286  Q
    ||||||  |  || |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||||    ||||    
T  22232713 tcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtaca 22232812  T
Q  287 tgattgtgataataactaacccccttacctt 317  Q
    ||||| |||||||||||||||||||||||||    
T  22232813 tgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 319
Target Start/End: Original strand, 2116265 - 2116591
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcaca-tctcaaatcaacaacaac 102  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| | | |||||| ||||| |||    
T  2116265 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaaattaacaataac 2116364  T
Q  103 ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatca-----------tcaattc 191  Q
    |||| | ||||||||||||| ||||| ||  ||| |||||| ||||||||||||||||||||||||||||||||||||||||           |||||||    
T  2116365 ttagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattc 2116463  T
Q  192 atgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgatt 291  Q
    |||| ||||||||||||||||||| || ||||||||| |  ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2116464 atgcatacaaacataacatcacagtaaaagcacgaatctagcatgaattgttcatcaacccatttttatacaacatgagaaaatgcaaaattacatgatt 2116563  T
Q  292 gtgataataactaacccccttaccttaa 319  Q
     ||||||| ||||||||| |||||||||    
T  2116564 atgataatcactaacccctttaccttaa 2116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 59 - 319
Target Start/End: Original strand, 45051489 - 45051759
Alignment:
Q  59 ataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatt 158  Q
    |||||||||||||| || |||||| ||||||||| ||| | ||||||| | ||||||||||||| ||||||||  ||| |||||| ||||||||||||||    
T  45051489 ataacatcaattgagcaagaatcaaatctcaaattaaccataacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatt 45051587  T
Q  159 tgaacatgtaatttcaccaacaatca-----------tcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    ||||||||||||||||||||||||||           ||||||||||| ||||||| ||||||||||| |||| ||||||| |  |||||||||||||||    
T  45051588 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacacgaatctagcatgaattgttcatc 45051687  T
Q  248 aacccattttcatacaacatgagcaaatgcaaaattacatgattgtgataataactaacccccttaccttaa 319  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||  |||||||||||||||||||    
T  45051688 aacccattttcatacaacatgagaaaatgcaaaatcacatgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 20931356 - 20931592
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||| ||||||||||||| || || ||||| |||||  |||||||||||||||||| |||||| ||||||||| |||||||| |    
T  20931356 catgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaatt 20931455  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc-----------atcaattca 192  Q
    ||| | ||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||           |||||||||    
T  20931456 tagca-aaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattca 20931554  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||| ||||||||   ||||||||||||    
T  20931555 tgcatacaaacatatcatcacagttggagcacgaattt 20931592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 368
Target Start/End: Original strand, 41394230 - 41394609
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| |||||| || | |||||||||  | || |||||||||||   |||||||||||||| || |||||| |||||||   ||||| |    
T  41394230 atccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaacataacaata 41394329  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||| | ||||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||| ||||||||||           |||||||||    
T  41394330 acttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaat 41394428  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaa--tgcaaaatta-ca 286  Q
    | |||| |||||||||| ||||| ||   ||||||||||||  ||  |||  | ||| || | |  ||||||||||||  | |||  | |||||| |  |    
T  41394429 ttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatga 41394527  T
Q  287 tgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttctcc 368  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41394528 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 20913048 - 20913277
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||||||||||||| || || ||||| |||||  |||||||||||||||||| ||||||       ||| ||||||||||    
T  20913048 catgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca-------aattaacaacaact 20913140  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc-----------atcaattca 192  Q
    | | | ||||||||||||| ||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||           |||||||||    
T  20913141 ttgca-aaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattca 20913239  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||| ||||||||   ||||||||||||    
T  20913240 tgcatacaaacatatcatcacagttggagcacgaattt 20913277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 18059816 - 18059676
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  18059816 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 18059717  T
Q  280 a-at--tacatgattgtgataataactaacccccttacctt 317  Q
    | ||  ||||||||| |||||||||||||||||||||||||    
T  18059716 agattatacatgattatgataataactaacccccttacctt 18059676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 20893877 - 20893698
Alignment:
Q  5 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaactt 104  Q
    ||||||||||| |||||| |||| ||||||||| || || ||||| ||||| ||||||||||||||||||| |||||| |  ||||   |||||||||||    
T  20893877 atgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaactt 20893778  T
Q  105 aggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    || | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||| ||||||||||    
T  20893777 agca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcat 20893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 318
Target Start/End: Original strand, 46523590 - 46523727
Alignment:
Q  183 catcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat 282  Q
    |||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| |||||||||||    
T  46523590 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 46523689  T
Q  283 --tacatgattgtgataataactaacccccttacctta 318  Q
       |||||||| ||||||||||||||||||||||||||    
T  46523690 ggaacatgattatgataataactaacccccttacctta 46523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 17004864 - 17004976
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  17004864 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 17004963  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  17004964 acccccttacctt 17004976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 20445690 - 20445870
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| | | ||| ||||||||||||    
T  20445690 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaattcaacaacaact 20445789  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  |||  ||||| ||||| | | || ||||||||||||||||||||||||||||    
T  20445790 tagca-aaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcat 20445870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 20531455 - 20531635
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| | | ||| ||||||||||||    
T  20531455 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaattcaacaacaact 20531554  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  |||  ||||| ||||| | | || ||||||||||||||||||||||||||||    
T  20531555 tagca-aaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcat 20531635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 22035681 - 22035786
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  22035681 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22035780  T
Q  313 acctta 318  Q
    ||||||    
T  22035781 acctta 22035786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 19962525 - 19962417
Alignment:
Q  212 acagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataactaaccc 308  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||    
T  19962525 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19962426  T
Q  309 ccttacctt 317  Q
    |||||||||    
T  19962425 ccttacctt 19962417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 7640956 - 7640851
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  7640956 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 7640857  T
Q  313 acctta 318  Q
    ||||||    
T  7640856 acctta 7640851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 360  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 38055125 - 38055009
Alignment:
Q  204 ataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataata 300  Q
    |||||||||||| || ||||||||||| |||  ||||||||| |||||||||||||||||||||||| | ||||||| ||  ||||||||| ||||||||    
T  38055125 ataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaagatgcaaagattgtacatgattatgataata 38055026  T
Q  301 actaacccccttacctt 317  Q
    |||||||||||||||||    
T  38055025 actaacccccttacctt 38055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 17148765 - 17148898
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||| ||||||||    
T  17148765 aatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 17148864  T
Q  280 aa---ttacatgattgtgataataactaaccccc 310  Q
    ||    ||||||||| ||||||||||||||||||    
T  17148865 aaattgtacatgattatgataataactaaccccc 17148898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 37844703 - 37844522
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| | ||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||||||||    
T  37844703 catgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatctaacaacaact 37844604  T
Q  104 taggagaaattcaccaatttagcacaatactca-taacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | |||||||  |||| ||||||||  ||| ||  ||| ||||| | | || ||||||||||||||||||||||||||||    
T  37844603 tagca-aaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcat 37844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 366
Target Start/End: Original strand, 41218742 - 41218808
Alignment:
Q  300 aactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  41218742 aactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 27675134 - 27675191
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    |||||||||||||||||||||||||||| |  |||| | |||||||||||||||||||    
T  27675134 ctaacccccttaccttaattatctccaattcctagcccaagcttcactttagctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 51452608 - 51452683
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  51452608 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 51452683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    |||||||| |||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 25093926 - 25093967
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  25093926 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 25093967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 25175571 - 25175901
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  25175571 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 25175670  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  25175671 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 25175770  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgag-caaatgcaaaat--taca 286  Q
    |||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||  |||||||||||  ||||    
T  25175771 tcatgcatacaaacataacaacacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaaatgcaaaattataca 25175870  T
Q  287 tgattgtgataataactaacccccttacctt 317  Q
    ||||| || |||| |||||||||||||||||    
T  25175871 tgattatggtaatcactaacccccttacctt 25175901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 27654227 - 27653898
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||| |||||||    
T  27654227 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaattaacaaca 27654128  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||||    
T  27654127 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaat 27654028  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||||| ||||| ||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||| ||||||||||||  ||||    
T  27654027 tcatgcatacaagcataacatcacagcaagagcacgaatttagcatgatttgttcatcaatccattttcatacaacatgagaaaatgcaaaattacacat 27653928  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| ||||||| ||||||||||| |||||    
T  27653927 gattatgataatcactaaccccctcacctt 27653898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 16825998 - 16825678
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  16825998 atccatgaatatgcataacaaagcaattattcatcaatcataatatcagataacattcataacatcatttgaacaagaatcacaactcaaattaacaaca 16825899  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-------------catca 187  Q
    | ||||||||||| |||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||             |||||    
T  16825898 aattaggagaaatccaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatca 16825799  T
Q  188 attcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--ac 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  16825798 attcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacac 16825699  T
Q  286 atgattgtgataataactaac 306  Q
    |||||| ||||||| ||||||    
T  16825698 atgattatgataatcactaac 16825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 4 - 319
Target Start/End: Complemental strand, 1650345 - 1650020
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || |||||||||||   |||||||||||||| || |||||| ||||||||| ||| | ||||    
T  1650345 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaaccataact 1650246  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------caattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||| ||||||||||||||||||||||||||||||||||||           |||||||    
T  1650245 tagca-aaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 1650147  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 292  Q
    ||| ||||||| ||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  1650146 tgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacatgatta 1650047  T
Q  293 tgataataactaacccccttaccttaa 319  Q
    ||||||  |||||||||||||||||||    
T  1650046 tgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 14626370 - 14626134
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| ||||||| | ||||||||||    
T  14626370 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaacaacaact 14626271  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattca 192  Q
    ||| | || ||||||||||   ||||||  |||||||||| |||||||||||||||||||||||||||||||||||||           |||||||||||    
T  14626270 tagcataa-ttcaccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 14626172  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  14626171 tgcatacaaacataacatcacagcaagagcacgaattt 14626134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 16232090 - 16232231
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  16232090 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 16232189  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  16232190 aaattgtacatgattatgataataactaacccccttacctta 16232231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 35009691 - 35009455
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||   | |||||||||||||||||  || ||||  || |||||||||||     
T  35009691 catgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaaca 35009592  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||           |||||||||||    
T  35009591 tagca-aaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 35009493  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| ||||||| |||||||||||  |||||||||||||    
T  35009492 tgcatacaaacttaacatcacagttagagcacgaattt 35009455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 22251624 - 22251484
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  22251624 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 22251525  T
Q  280 a-at--tacatgattgtgataataactaacccccttacctt 317  Q
    | ||  ||||||||| |||||||||||||||||| ||||||    
T  22251524 agattgtacatgattatgataataactaacccccatacctt 22251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 1556203 - 1556344
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  1556203 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 1556302  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| |||| |||||||||||||||||||||    
T  1556303 aaattgaacatgattatgatgataactaacccccttacctta 1556344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 10488925 - 10489037
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  10488925 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 10489024  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  10489025 acccccttacctt 10489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 16376403 - 16376291
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  16376403 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 16376304  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  16376303 acccccttacctt 16376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 16383727 - 16383615
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  16383727 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 16383628  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  16383627 acccccttacctt 16383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 22225796 - 22225656
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  22225796 aatcatcaattcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 22225697  T
Q  280 a-at--tacatgattgtgataataactaacccccttacctt 317  Q
    | ||  ||||||||| |||||||||||||||||| ||||||    
T  22225696 agattgtacatgattatgataataactaacccccatacctt 22225656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 23153458 - 23153638
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | ||||||| ||| ||||||||| || || ||||| |||||  ||||| |||||||||||| |||||| | |||||   ||||||||||    
T  23153458 catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact 23153557  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  23153558 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 23153638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 19610244 - 19610357
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataacta 304  Q
    |||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||| || ||||||||||    ||||||||| ||||||||||||    
T  19610244 catcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatcagaaaatgcaaaaattgtacatgattatgataataacta 19610343  T
Q  305 acccccttacctta 318  Q
    ||||||||||||||    
T  19610344 acccccttacctta 19610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 29869798 - 29869693
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  29869798 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaattttaaattgattatgataataactaaccccctt 29869699  T
Q  313 acctta 318  Q
    ||||||    
T  29869698 acctta 29869693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 16556169 - 16556057
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    |||||||||| |||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  16556169 catcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 16556070  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  16556069 acccccttacctt 16556057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 16632725 - 16632613
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    |||||||||| |||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  16632725 catcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 16632626  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  16632625 acccccttacctt 16632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 19299467 - 19299575
Alignment:
Q  212 acagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataactaaccc 308  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||    
T  19299467 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19299566  T
Q  309 ccttacctt 317  Q
    |||||||||    
T  19299567 ccttacctt 19299575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 1657999 - 1657764
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || ||||| |||||   |||||||||| |||||| |||||| | ||||| ||| ||| ||||    
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaattca 192  Q
    ||| | |||| || ||||| ||||||||  ||||||||| ||||||||||||| |||||||||| |||||||||||||           |||||||||||    
T  1657900 tagca-aaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 1657802  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| | |||||||||||||||||  |||||||||||||    
T  1657801 tgcatccaaacataacatcacagttagagcacgaattt 1657764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 18086881 - 18086740
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  18086881 aatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 18086782  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| |  |||||||||||||||||||||||    
T  18086781 aaattgtacatgattatactaataactaacccccttacctta 18086740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 23977967 - 23978108
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||| ||||||||    
T  23977967 aatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 23978066  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| |||||||||||||| |||||||||||    
T  23978067 aaattgtacatgattatgataataactaacgcccttacctta 23978108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 266
Target Start/End: Original strand, 29665941 - 29666157
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||| | ||||||||||||| || |||||  ||||||||| |||||| | |||| |||    
T  29665941 aacatcaattgaacatgaatcatatctcatttcaacaacaacttagca-aaattcaccaattgagtacaat-ttcataacttgacatttatgcatacttt 29666038  T
Q  160 g-aacatgtaatttcaccaaca-----------atcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    | |||||||||||||||| |||           ||||||||||||| | ||  || ||||||||||||| ||||||||||||| |||  |||| | ||||    
T  29666039 gaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatc 29666138  T
Q  248 aacccattttcatacaaca 266  Q
    | |||||||||||||||||    
T  29666139 accccattttcatacaaca 29666157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 13620852 - 13620711
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||| ||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  13620852 aatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 13620753  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| |||  |  ||||||||||||||||||    
T  13620752 aaattgtacatgattatgaagaagactaacccccttacctta 13620711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 15862484 - 15862718
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||| | |||||||||  | || ||||| || ||   ||||||| ||| ||||| |||||| | ||||| ||| ||| ||||    
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | |||| || ||||| ||||||||  ||||||||| |||||| |||||| |||||||||| ||||||||||||           ||||||||||||    
T  15862582 tagca-aaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattca 15862680  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||||||||||||  |||||||||||||    
T  15862681 tgcatacaaacataacatcacagttagagcacgaattt 15862718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 27740907 - 27741021
Alignment:
Q  62 acatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatattt-- 159  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||| | ||||||||||||| ||||||||  ||||||||| |||||| |||||| ||      
T  27740907 acatcaattgaacatgaatcatatctcaattcaacaacgacttagca-aaattcaccaattgagcacaat-ttcataacttgacatttatacatacttcg 27741004  T
Q  160 gaacatgtaatttcacc 176  Q
     ||||||||||||||||    
T  27741005 aaacatgtaatttcacc 27741021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||| | ||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 27751624 - 27751672
Alignment:
Q  182 tcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||    
T  27751624 tcatcaattcatgcatacaaacataacatcacaattagagcacgaattt 27751672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 14626076 - 14626045
Alignment:
Q  286 atgattgtgataataactaacccccttacctt 317  Q
    ||||||||||||||||||||||||||||||||    
T  14626076 atgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 18399005 - 18399046
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  18399005 aacatcaattgaacatgaatctcatcacaattcaacaacaac 18399046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 23153645 - 23153694
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||||||||||| |||||||||| ||||||||   ||||||||||||    
T  23153645 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 23153694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 197; Significance: 1e-107; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 36101 - 36430
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  36101 atccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataacatctattgaacatgaatcacatctcaaattaacaaca 36200  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaat 189  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| |||| |||||||||||||||||||           |||||||    
T  36201 acttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaat 36300  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--acat 287  Q
    |||| | |||||||||||||||||  |||||||||||||||  ||||||||||||||||||||| |||||||||||||||| | ||||||||||  ||||    
T  36301 tcatacatacaaacataacatcactacaagagcacgaatttagcatgaattgttcatcaacccagtttcatacaacatgagaatatgcaaaattacacat 36400  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| ||||||| | |||||||||||||||    
T  36401 gattatgataatcattaacccccttacctt 36430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 169949 - 169830
Alignment:
Q  197 tacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat--tacatgattgtg 294  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| ||    
T  169949 tacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattatacatgattatg 169850  T
Q  295 ataataactaacccccttac 314  Q
    ||||| ||||||||||||||    
T  169849 ataatcactaacccccttac 169830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 154065 - 153924
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  154065 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 153966  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  153965 aaattgtacatgattatgataataactaacccccttacctta 153924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 48609 - 48789
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| ||| |  |||||||||||||||||| |||||| | |||||   | ||||||||    
T  48609 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatctagcaacaact 48708  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||| | ||||||||  ||| |||||| ||||||| | |||||||||||||||||||||||||||||||    
T  48709 tagca-aaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcat 48789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 48796 - 48845
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||||||||||| |||||||||| ||||||||   ||||||||||||    
T  48796 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 48845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 31920 - 31593
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31920 atccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 31821  T
Q  101 ac-ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catcaa 188  Q
    || |||||||||||||||||||| |||| |||| |||||||||| ||||||| ||||| |||| |||||||||||||||||||           ||||||    
T  31820 actttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaa 31721  T
Q  189 ttcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt--aca 286  Q
    ||||||| | |||||||||||||||  |||||||||||||||  |||||||||||||||||| ||||||||||||||||||| | ||||||||||  |||    
T  31720 ttcatgcattcaaacataacatcaccacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagaatatgcaaaattacaca 31621  T
Q  287 tgattgtgataataactaacccccttac 314  Q
    ||||| ||||||| ||||||||||||||    
T  31620 tgattatgataatcactaacccccttac 31593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 128420 - 128243
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||| ||||||||||||||||| || ||| | |||||| |||||||||||||||||| |||||| ||||| ||| |||||||||     
T  128420 catgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctc-aattaacaacaacc 128322  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||  | |||||| |||||| ||||||||  ||| |||||||||  |||||| ||||||||||||||||||||||||||||    
T  128321 taaca-aaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatc 128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 21359 - 21031
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||    
T  21359 atccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattcataacatcaattgaacaagaatccaatctcaaattaacaaca 21260  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||||| ||||||||||||| ||| ||||  |||||||||| ||||||||||||||||||||||||||||||| ||||           |||||||||    
T  21259 acttagga-aaattcaccaattgagctcaatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaat 21161  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat--tacat 287  Q
    | |||  |||||||||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||  |||||    
T  21160 taatggatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattgtacat 21061  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| |||||||||||||||||||||||||    
T  21060 gattatgataataactaacccccttacctt 21031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 14304 - 13977
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||  ||||||||| | |||||    
T  14304 atccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattcataacattaattgaacaagaatccaatctcaaattatcaaca 14205  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||| ||||||||||||||| ||||           |||||||||    
T  14204 acttagga-aaattcaccaattgagcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaat 14106  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat--tacat 287  Q
    |||||| |||| |||||||||||||||||||||||| ||||  || ||||||| ||||||||||||||||||||||||||| |||||||||||  |||||    
T  14105 tcatgcatacagacataacatcacagcaagagcacg-atttagcaagaattgtgcatcaacccattttcatacaacatgagaaaatgcaaaattgtacat 14007  T
Q  288 gattgtgataataactaacccccttacctt 317  Q
    |||| |||||||||||||||||||||||||    
T  14006 gattatgataataactaacccccttacctt 13977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 4 - 318
Target Start/End: Complemental strand, 9589 - 9265
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  |||||||||| |||| || |||||| ||||||||| ||||| ||||    
T  9589 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaacaataact 9490  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------caattca 192  Q
    ||| | ||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  9489 tagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 9391  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 292  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9390 tgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 9291  T
Q  293 tgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||||||    
T  9290 tgataataactaacccccttacctta 9265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 4 - 318
Target Start/End: Complemental strand, 16487 - 16163
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||  |||||||||| |||| || |||||| ||||||||| ||||| ||||    
T  16487 catgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaacaataact 16388  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------caattca 192  Q
    ||| | ||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  16387 tagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 16289  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 292  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16288 tgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaattacatgattg 16189  T
Q  293 tgataataactaacccccttacctta 318  Q
    ||||||||||||||||||||||||||    
T  16188 tgataataactaacccccttacctta 16163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 5458 - 5130
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||||||||||||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  5458 atccatgaatatgcaa-cccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaaca 5360  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    ||| || | ||||||||||||| | ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||           |||||||||    
T  5359 actcagca-aaattcaccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 5261  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttaca 286  Q
    ||||||  |  || ||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||||||    ||||    
T  5260 tcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaacccattttcatacaacgtgagaaaatgcaaaaattgtaca 5161  T
Q  287 tgattgtgataataactaacccccttacctt 317  Q
    ||||| |||||||||||||| ||||||||||    
T  5160 tgattatgataataactaactcccttacctt 5130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 3730 - 4061
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  3730 atccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaaca 3829  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaaca-tttttacatatttgaacatgtaatttcaccaaca-----------atcatcaa 188  Q
    |||||| | |||||||||||||   ||||||   ||||||||| || ||||||||||||||||||||||||||||||||||           ||||||||    
T  3830 acttagca-aaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaa 3928  T
Q  189 ttcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttac 285  Q
    |||||||  |  || ||| ||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||||    |||    
T  3929 ttcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtac 4028  T
Q  286 atgattgtgataataactaacccccttacctta 318  Q
    |||||| ||||||||||||| ||||||||||||    
T  4029 atgattatgataataactaaaccccttacctta 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 99 - 317
Target Start/End: Complemental strand, 1450 - 1220
Alignment:
Q  99 caacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------ca 187  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||           ||    
T  1450 caacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatca 1351  T
Q  188 attcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc-aaaattaca 286  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1350 attcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagtaaatgcaaaaattaca 1251  T
Q  287 tgattgtgataataactaacccccttacctt 317  Q
    |||||||||||||||||||||||| ||||||    
T  1250 tgattgtgataataactaacccccctacctt 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 4 - 318
Target Start/End: Original strand, 2973 - 3300
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaa-catgaatcacatctcaaatcaacaacaac 102  Q
    |||||||||||| || |||||| | |||||||||  | || |||||||||||   |||||||||||| || ||||||||| ||||||| |||||||||||    
T  2973 catgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaacaacaac 3072  T
Q  103 ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatca-----------tcaattc 191  Q
    |||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||||||||||||||||||||||||||           |||||||    
T  3073 ttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattc 3171  T
Q  192 atgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat--tacatga 289  Q
    |||  ||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||  ||||| |    
T  3172 atggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattgtacataa 3271  T
Q  290 ttgtgataataactaacccccttacctta 318  Q
    || ||||||||| ||||||||||||||||    
T  3272 ttatgataataattaacccccttacctta 3300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 126; Significance: 7e-65; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 5551 - 5720
Alignment:
Q  16 aacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattc 115  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||||    
T  5551 aacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattc 5650  T
Q  116 accaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  5651 accaattgagcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcat 5720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 5727 - 5776
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||||||||||| |||||||||||||||| ||   ||||||||||||    
T  5727 atcatcaattcatgcatacaaacataacatcaaagttggagcacgaattt 5776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 89 - 317
Target Start/End: Complemental strand, 13480 - 13242
Alignment:
Q  89 aaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat--- 185  Q
    |||| ||||| ||||||| | ||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||       
T  13480 aaattaacaataacttagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 13382  T
Q  186 --------caattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgc 277  Q
            |||||||||| ||||||||||||||||||  |||||||||||| |  |||||||||||||||||||||||||||||||||||||| |||||     
T  13381 attatcatcaattcatgcatacaaacataacatcacactaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatga 13282  T
Q  278 aaaattacatgattgtgataataactaacccccttacctt 317  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  13281 aaaattacatgattatgataatcactaacccccttacctt 13242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 1135 - 1315
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||||||||||||| || |||||||| |||||  |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  1135 catgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaact 1234  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  1235 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 3837 - 3654
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    |||||| |||||||| |||||||||||||||| ||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  3837 atccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaaca 3738  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||| | ||||| ||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  3737 acttagca-aaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 3654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 8889 - 9067
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  8889 catgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaact 8988  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||  | ||||||||||||| ||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  8989 taaca-aaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatc 9067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 48195 - 48378
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||| |||||||||||||||||| || ||||| ||||||  ||||||||||||||||| |||||| ||||||||| |||||||    
T  48195 atccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaattaacaaca 48294  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  48295 acttaaca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcat 48378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 20507 - 20572
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||||||| ||||    
T  20507 actaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 12123 - 12360
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| |  ||||||    
T  12123 atccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaatt--acaaca 12220  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaat 189  Q
    |||||  | ||||||||||||||||||||||  ||| |||||| |||||||||| |||| |||||||| |||||||||||           |||||||||    
T  12221 acttaaca-aaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaat 12319  T
Q  190 tcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    |||||| |||||||||| ||||||||  |||||||||||||    
T  12320 tcatgcatacaaacatatcatcacagttagagcacgaattt 12360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 6318 - 6136
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||| |||||| ||||| ||| |||||||    
T  6318 atccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctc-aattaacaaca 6220  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||| | ||||||||||||| ||||||||  | | ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6219 acttagca-aaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcat 6136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 1210 - 1028
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || || |||||| |||||||||| ||||||| |||| | ||||| ||| |||||||    
T  1210 atccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctc-aattaacaaca 1112  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||| | ||||||| ||||| ||||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  1111 acttagca-aaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcat 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 96; Significance: 5e-47; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 148732 - 148910
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    ||||||||| || ||||||||||| ||||||||| || ||  |||| |||||  |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  148732 catgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaact 148831  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  148832 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 148910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 8860 - 9040
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||| | ||||||||||| |||||||||  | || ||||| ||| |   |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  8860 catgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaattcaacaacaact 8959  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8960 tagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 9047 - 9096
Alignment:
Q  181 atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||||||||||| |||||||||| ||||||||   ||||||||||||    
T  9047 atcatcaattcatgcatacaaacatatcatcacagatggagcacgaattt 9096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 19217 - 19453
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| | ||||| ||||||||||||    
T  19217 catgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaact 19316  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc-----------atcaattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||           |||||||||    
T  19317 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 19415  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||| ||||||||   ||||||||||||    
T  19416 tgcatacaaacatatcatcacagttggagcacgaattt 19453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 21301 - 21537
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| | ||||| ||||||||||||    
T  21301 catgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaact 21400  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc-----------atcaattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||           |||||||||    
T  21401 tagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattca 21499  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||| ||||||||   ||||||||||||    
T  21500 tgcatacaaacatatcatcacagttggagcacgaattt 21537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 37165 - 36929
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||| ||||||||||| || ||| | |||||  |||| ||||||    
T  37165 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatccaaccacaact 37066  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | ||||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  37065 tagca-aaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattca 36967  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||| ||||||||   ||||||||||||    
T  36966 tgcatacaaacatatcatcacagttggagcacgaattt 36929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 15383 - 15319
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  15383 ctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 5313 - 5135
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||||| || ||||| |||||  |||||||||||||||||| |||||| | ||||    ||||||||||    
T  5313 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattctaacaacaact 5214  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    | | | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||| ||||||||||||||    
T  5213 ttgca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatc 5135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 123416 - 123236
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||| |||||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | || ||   ||||||||||    
T  123416 catgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatctaacaacaact 123317  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  123316 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 123236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 171916 - 172096
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||| ||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||  | ||||| ||||| ||||||    
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||||||||||||  ||| |||||| ||||| | | ||||||||||||||||||||||| |||||||    
T  172016 tagca-aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcat 172096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 177619 - 177799
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||| ||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||  | ||||| ||||| ||||||    
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||||||||||||  ||| |||||| ||||| | | ||||||||||||||||||||||| |||||||    
T  177719 tagca-aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcat 177799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 76; Significance: 5e-35; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 26663 - 26489
Alignment:
Q  8 aatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttagg 107  Q
    |||||||| ||||||||||| |||||||||||| || ||||| |||||  |||||||||||||||||| |||||| | ||||    |||||||||||||     
T  26663 aatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattctaacaacaacttagc 26564  T
Q  108 agaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    | ||||||||||||| || |||||  ||| |||||| |||||||||||||||||||||||| ||||||||| ||||    
T  26563 a-aaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatc 26489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 8327 - 8196
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat-----------caattcatgccta 198  Q
    ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||||| |||||||||||||||||||||           |||||||||| ||    
T  8327 aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcata 8228  T
Q  199 caaacataacatcacagcaagagcacgaattt 230  Q
    |||||||||||||||||  |||||||||||||    
T  8227 caaacataacatcacagttagagcacgaattt 8196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 34716 - 34476
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaa-catgaatcacatctcaaatcaacaac 99  Q
    ||||||||||||||| ||||||| | | |||||||||  | || |||||||||||   |||||||||||| || ||||||||| ||||||| ||||||||    
T  34716 atccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaacaac 34617  T
Q  100 aacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcatcaa 188  Q
    ||||||| | ||||||||| ||| || |||||  ||| ||||| | ||||||||| | ||||||||||||||||||||||||           |||||||    
T  34616 aacttagca-aaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaa 34518  T
Q  189 ttcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||||||| |||||||||||||||||||  |||||||||||||    
T  34517 ttcatgcatacaaacataacatcacagttagagcacgaattt 34476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 29388 - 29500
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  29388 catcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 29487  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  29488 acccccttacctt 29500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 41659 - 41895
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| |||||||||  | || ||||  |||||   | |||||||||||||||||  || ||||  || |||||||||||     
T  41659 catgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaaca 41758  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | ||||||||||||| | ||||||  ||| ||||| ||||||||||||| |||||||||||||||||||||||           ||||||||||||    
T  41759 tagca-aaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 41857  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||||||||||||  |||||||||||||    
T  41858 tgcatacaaacataacatcacagttagagcacgaattt 41895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 48522 - 48620
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||| |||||| ||||||||| ||||||    
T  48522 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatcaaatctcaaattaacaac 48620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 31535 - 31647
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaa-at--tacatgattgtgataataacta 304  Q
    ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||    
T  31535 catcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 31634  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  31635 acccccttacctt 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 39844 - 39934
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgag 270  Q
    ||||||||||||||||  |  || |||  ||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||    
T  39844 aatcatcaattcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgag 39934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 247694 - 247514
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| ||||| ||||||||||||||||||| |||||| | |||||   ||||||||||    
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||| ||||||| ||||||||  ||| |||||| ||||| | | |||||||||||| |||||||||  |||||||    
T  247594 tagca-aaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcat 247514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 34216 - 34075
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgagcaaatgca 278  Q
    ||||||||||||||||  |  || ||| | |||||||||||||||||||||  ||  |||| |||||||||||| ||||||||||| ||||| |||||||    
T  34216 aatcatcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaaccca-tttcatacaacaatgagaaaatgca 34118  T
Q  279 aaatt---acatgattgtgataataactaacccccttacctta 318  Q
    ||| |   |||||||| |||| |  ||||||||||||||||||    
T  34117 aaaattgaacatgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 272036 - 272216
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||   |||||| |||||||||| |||||| | |||||  |||| ||||||    
T  272036 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaaccacaact 272135  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||| | ||||||||||||||||||||||  ||| |||||| ||||| | | ||||||||||||||||||| ||| |||||||    
T  272136 tagca-aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcat 272216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 69524 - 69565
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 102  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  69524 aacatcaattgaacatgaatctcatcacaattcaacaacaac 69565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 37320 - 37138
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 100  Q
    ||||||||||||| | ||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | |||||  |||| |||    
T  37320 atccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatccaactaca 37221  T
Q  101 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    || |  |  ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  37220 acat--gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 37138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 1572 - 1431
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| ||| ||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  1572 aatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 1473  T
Q  280 aa---ttacatgattgtgataataactaacccccttacctta 318  Q
    ||    ||||||||| ||||||||||||||||||||||||||    
T  1472 aaattgtacatgattatgataataactaacccccttacctta 1431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 1633 - 1492
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||| |||||| |||  ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  1633 aatcatcaattcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaa 1534  T
Q  280 aatt---acatgattgtgataataactaacccccttacctta 318  Q
    || |   |||||||| ||||||||||||||||||||||||||    
T  1533 aaattgaacatgattatgataataactaacccccttacctta 1492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 6831 - 6936
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaaccccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||   |  ||||| ||||||||||||||||||||    
T  6831 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 6930  T
Q  313 acctta 318  Q
    ||||||    
T  6931 acctta 6936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 107 - 9
Alignment:
Q  1 atccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||| |||||| || |||||| ||||||    
T  107 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataatatcatttgaacaagaatcaaatatcaaattaacaac 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 10778 - 10666
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa---ttacatgattgtgataataacta 304  Q
    ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||||    
T  10778 catcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 10679  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  10678 acccccttacctt 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 13517 - 13753
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||||  || |||||||||  | || ||||| |||||   | |||||||||||||||||  || ||||  || |||||||||||     
T  13517 catgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaaca 13616  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | ||||||| ||||| ||||||||  ||| ||||| ||||||||||||| |||||||||||||||||||||||           ||||||||||||    
T  13617 tagca-aaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattca 13715  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||||||||| ||  |||||||||||||    
T  13716 tgcatacaaacataacatcaaagttagagcacgaattt 13753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 41740 - 41976
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 103  Q
    |||||||||||| |||||| |||| ||||||||   | || | ||| |||||  |||| ||||||||||||| |||||| | |||||   ||||||||||    
T  41740 catgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaacaacaact 41839  T
Q  104 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcatcaattca 192  Q
    ||| | ||||||||||||| ||||||||  ||| || ||| ||||||||||||||||| ||||||||||||||||||           ||||||||||||    
T  41840 tagca-aaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattca 41938  T
Q  193 tgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    ||| |||||||||| ||||||||   ||||||||||||    
T  41939 tgcatacaaacatatcatcacagttggagcacgaattt 41976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 183 - 318
Target Start/End: Original strand, 2593 - 2732
Alignment:
Q  183 catcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa- 281  Q
    |||||||||||||  |  || ||| |||||| |||||||||||||||   ||  |||||||||||||||||||||||||||||||||| ||||||||||     
T  2593 catcaattcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 2692  T
Q  282 ---ttacatgattgtgataataactaacccccttacctta 318  Q
        ||||||||| ||||||||||||||||||||||||||    
T  2693 tttgtacatgattatgataataactaacccccttacctta 2732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 7486 - 7374
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataacta 304  Q
    ||||||| |||||||||||||||   |  |||||||||||||||||||||||||||||||||| |||||||||| |   |||||||| ||||||||||||    
T  7486 catcacaacaagagcacgaatttagtaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaatggaacatgattatgataataacta 7387  T
Q  305 acccccttacctt 317  Q
    |||||||||||||    
T  7386 acccccttacctt 7374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 166196 - 166116
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  166196 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 162110 - 162036
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 360  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  162110 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 116467 - 116410
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  116467 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 360  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 360  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 7443 - 7510
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  7443 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatt 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 10397 - 10296
Alignment:
Q  180 aatcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaa 279  Q
    ||||||||||||||||  |  || ||| |||||||||||||||||||||||  ||  |||| ||||||||||||||||||||||||||||| ||||||||    
T  10397 aatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaa 10298  T
Q  280 aa 281  Q
    ||    
T  10297 aa 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 23769 - 23666
Alignment:
Q  218 agagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttac 314  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||   |  ||| | |||||||||||||||||||||     
T  23769 agagcacgaatttgacatgagttgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgaatatgataataactaacccccttaa 23670  T
Q  315 ctta 318  Q
    ||||    
T  23669 ctta 23666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 318
Target Start/End: Original strand, 45098 - 45370
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | ||||||||||||| || |||||  ||| ||||| |||||| |||||| |||    
T  45098 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatca-aaattcaccaattgagtacaat-ttcaaaacttgacatttatacatacttt 45195  T
Q  160 g-aacatgtaatttcaccaaca-----------atcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    | |||||||||||||||| |||           |||||||||||||||  |  || ||| ||||||| |||| |||||||||| |||  |||| ||||||    
T  45196 gaaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcatc 45295  T
Q  248 aacccattttcatacaac-atgagcaaatgcaa-aatt--acatgattgtgataataactaacccccttacctta 318  Q
    |||||||||||||||||| ||||| || ||||| ||||  |||||||| |||| |  ||||||||||||||||||    
T  45296 aacccattttcatacaacaatgagaaattgcaataattgaacatgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 318
Target Start/End: Original strand, 54484 - 54756
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | ||||||||||||| || |||||  ||||||||| |||||| |||||| |||    
T  54484 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatca-aaattcaccaattgagtacaat-ttcataacttgacatttatacatacttt 54581  T
Q  160 g-aacatgtaatttcaccaaca-----------atcatcaattcatgcctacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatc 247  Q
    | |||||| ||||||||| |||           |||||||||||||||  |  || ||| ||||||||||||  ||||||||| |||  |||| ||||||    
T  54582 gaaacatgcaatttcacccacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatc 54681  T
Q  248 aacccattttcatacaac-atgagcaaatgcaa-aatt--acatgattgtgataataactaacccccttacctta 318  Q
    |||||||||||||||||| ||||| || ||||| ||||  |||||||| |||| |  ||||||| ||||||||||    
T  54682 aacccattttcatacaacaatgagaaattgcaataattgaacatgattatgatgaagactaaccaccttacctta 54756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 12149 - 12044
Alignment:
Q  216 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaa-catgagcaaatgcaaaatt---acatgattgtgataataactaaccccct 311  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| ||||||   |  ||||| |||||||||||||||||||    
T  12149 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgag-aaatgaaaaatttgaaattgattatgataataactaaccccct 12051  T
Q  312 tacctta 318  Q
    |||||||    
T  12050 tacctta 12044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 185
Target Start/End: Complemental strand, 784 - 606
Alignment:
Q  6 tgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaactta 105  Q
    |||||||||| ||||||||||| ||||||||| || || ||||| || ||  ||||||||||||| |||| |||||| | || ||   ||||  ||||||    
T  784 tgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatctaacagtaactta 685  T
Q  106 ggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    | | ||||||||||||| || |||||  ||| |||| | ||||| | | |||||||||||||||||||||||||||||||    
T  684 gca-aaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcat 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 54100 - 54173
Alignment:
Q  208 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa 281  Q
    |||||||| ||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  54100 catcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaa 54173  T

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Target: scaffold0018 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 51328 - 51256
Alignment:
Q  111 aattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 183  Q
    |||||||||||| ||||||||  ||| |||||| ||||||||| |||||||||||||||||||||||||||||    
T  51328 aattcaccaattgagcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatc 51256  T

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Target: scaffold0892 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 3637 - 3712
Alignment:
Q  206 aacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaa 281  Q
    |||||||||| |||||||| |||||  ||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  3637 aacatcacagtaagagcactaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaa 3712  T

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Target: scaffold1164 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 1715 - 1780
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| ||||    
T  1715 actaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

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Target: scaffold0122 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 19867 - 19802
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| ||||    
T  19867 actaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

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Target: scaffold0122; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 24171 - 24106
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||||||| ||||    
T  24171 actaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

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Target: scaffold0342 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 384 - 304
Alignment:
Q  286 atgattgtgataataactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 366  Q
    |||||| ||||||  | ||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  384 atgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

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Target: scaffold0622 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 9393 - 9471
Alignment:
Q  4 catgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatca 82  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| ||||||    
T  9393 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatca 9471  T

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Target: scaffold0876 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 108 - 164
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcc 357  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||    
T  108 actaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

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Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 6321 - 6261
Alignment:
Q  301 actaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 361  Q
    |||||||||||||||||||||||| || ||||||| ||| ||||||||||| |||||||||    
T  6321 actaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

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Target: scaffold0084 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 56295 - 56171
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata--tt 158  Q
    ||||||||| ||||||||||||||| ||   ||||||||||||||| | |||||||||| || ||||||||  ||||||||| |||||| ||||||  ||    
T  56295 aacatcaatggaacatgaatcacatatcttttcaacaacaacttagca-aaattcaccatttgagcacaat-ttcataacttgacatttatacatacttt 56198  T
Q  159 tgaacatgtaatttcaccaacaatcat 185  Q
      |||||||||||||| | ||||||||    
T  56197 aaaacatgtaatttcagccacaatcat 56171  T

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Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 13342 - 13267
Alignment:
Q  245 atcaacccattttcatacaacatgagcaaatgcaaaatt---acatgattgtgataataactaacccccttacctta 318  Q
    |||||||||||| ||||||||||||| |||||||||| |   |||||||| |||| |||||||||||||||||||||    
T  13342 atcaacccattt-catacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttacctta 13267  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 89600 - 89526
Alignment:
Q  111 aattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    |||||||||||| ||||||||  ||| ||||||  |||| | | |||||||||||||||||||||||||||||||    
T  89600 aattcaccaattgagcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcat 89526  T

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Target: scaffold0361 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 3257 - 3437
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 159  Q
    |||||||||||||||  |||||||| ||   ||||||||||||||| | |||||||||| || || |||||  ||||||||| | |||| |||||| |||    
T  3257 aacatcaattgaacaataatcacatatcctctcaacaacaacttagca-aaattcaccatttgagtacaat-ttcataacttgatatttatacatacttt 3354  T
Q  160 g-aacatgtaatttcaccaaca-----------atcatcaattcatgcctacaaacataacatcacagcaagagcacgaattt 230  Q
    | || |||||||||||||||||           ||||| ||||||||| ||||||| |||||||||||| |||||||||||||    
T  3355 gaaatatgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaattt 3437  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

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Target: scaffold0151 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 22602 - 22483
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaattt-agcacaatactcataacttaacatttttacata-tt 158  Q
    |||||||||| ||||||| ||||||||||| ||||||||||| ||| |  ||||||  ||||| |||| |||  |||||| ||| ||||| |||||| ||    
T  22602 aacatcaattaaacatgattcacatctcaattcaacaacaacatagca-caattcaataatttgagcataat--tcataagttagcatttatacatattt 22506  T
Q  159 tgaacatgtaatttcaccaacaa 181  Q
    |||||||| || |||||||||||    
T  22505 tgaacatgcaaattcaccaacaa 22483  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 22656 - 22731
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  22656 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 22731  T

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Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 26911 - 26986
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  26911 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 26986  T

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Target: scaffold0124 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 1729 - 1654
Alignment:
Q  110 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 185  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  1729 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 1654  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 197433 - 197386
Alignment:
Q  61 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttagga 108  Q
    ||||||||||||||||||||| |||| ||| ||||||||||| |||||    
T  197433 aacatcaattgaacatgaatctcatcacaattcaacaacaacatagga 197386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 442 - 499
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||| | ||||| |||| |  |||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

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Target: scaffold0507 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 1420 - 1363
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    ||||||||||||||| ||||||| |||| |  |||||| ||||||||||||| |||||    
T  1420 ctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  302 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 359  Q
    |||||||||||||||||||||||  ||| |  |||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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