View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1344_low_5 (Length: 475)

Name: NF1344_low_5
Description: NF1344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1344_low_5
NF1344_low_5
[»] chr8 (84 HSPs)
chr8 (174-446)||(43600246-43600515)
chr8 (25-107)||(43600098-43600180)
chr8 (25-100)||(3189916-3189989)
chr8 (25-104)||(6942484-6942571)
chr8 (66-104)||(13647410-13647448)
chr8 (66-104)||(13747835-13747873)
chr8 (25-104)||(43283919-43284006)
chr8 (66-104)||(43656115-43656153)
chr8 (25-107)||(1337065-1337155)
chr8 (25-71)||(94505-94551)
chr8 (25-100)||(2787038-2787121)
chr8 (66-104)||(5332995-5333033)
chr8 (66-100)||(8265347-8265381)
chr8 (66-104)||(8827850-8827888)
chr8 (66-104)||(9407469-9407507)
chr8 (25-100)||(10736831-10736914)
chr8 (66-104)||(11491876-11491914)
chr8 (66-100)||(16449204-16449238)
chr8 (25-100)||(23178848-23178931)
chr8 (66-104)||(26022326-26022364)
chr8 (25-100)||(37717393-37717476)
chr8 (66-104)||(38344128-38344166)
chr8 (66-100)||(39169564-39169598)
chr8 (66-104)||(40298771-40298809)
chr8 (25-71)||(42880978-42881024)
chr8 (66-107)||(3227313-3227354)
chr8 (25-99)||(13406630-13406712)
chr8 (66-107)||(24571850-24571891)
chr8 (67-104)||(44673601-44673638)
chr8 (66-98)||(4654068-4654100)
chr8 (66-97)||(7388534-7388565)
chr8 (69-104)||(7813507-7813542)
chr8 (73-104)||(24458402-24458433)
chr8 (66-100)||(257618-257652)
chr8 (66-100)||(658268-658302)
chr8 (66-100)||(844004-844038)
chr8 (66-104)||(2792858-2792896)
chr8 (66-104)||(5570973-5571011)
chr8 (25-71)||(6659319-6659365)
chr8 (25-71)||(6739721-6739767)
chr8 (25-71)||(7194292-7194338)
chr8 (66-100)||(7816482-7816516)
chr8 (66-100)||(9187180-9187214)
chr8 (25-71)||(10200675-10200721)
chr8 (66-100)||(10568164-10568198)
chr8 (25-71)||(10594210-10594256)
chr8 (66-100)||(10761898-10761932)
chr8 (25-67)||(13773390-13773432)
chr8 (66-100)||(16432085-16432119)
chr8 (66-100)||(17027838-17027872)
chr8 (66-100)||(17072520-17072554)
chr8 (66-100)||(17558274-17558308)
chr8 (66-100)||(17575717-17575751)
chr8 (66-100)||(17698601-17698635)
chr8 (66-104)||(18926088-18926126)
chr8 (66-100)||(21133086-21133120)
chr8 (66-100)||(23858276-23858310)
chr8 (66-104)||(24480774-24480812)
chr8 (66-100)||(28909544-28909578)
chr8 (66-104)||(29170844-29170882)
chr8 (66-100)||(29514705-29514739)
chr8 (25-71)||(29716890-29716936)
chr8 (66-100)||(29729198-29729232)
chr8 (66-100)||(31450914-31450948)
chr8 (66-100)||(33838403-33838437)
chr8 (66-100)||(34266091-34266125)
chr8 (25-71)||(34413092-34413138)
chr8 (66-100)||(37291001-37291035)
chr8 (66-100)||(38219525-38219559)
chr8 (66-100)||(39587626-39587660)
chr8 (66-100)||(43186932-43186966)
chr8 (66-104)||(43403371-43403409)
chr8 (66-99)||(2626023-2626056)
chr8 (66-99)||(7763897-7763930)
chr8 (66-103)||(10573180-10573217)
chr8 (66-107)||(10984486-10984527)
chr8 (67-100)||(11127982-11128015)
chr8 (66-107)||(28536202-28536243)
chr8 (67-104)||(34472377-34472414)
chr8 (66-95)||(42035415-42035444)
chr8 (66-99)||(43980271-43980304)
chr8 (67-107)||(12273627-12273667)
chr8 (66-102)||(33604133-33604169)
chr8 (75-107)||(41756114-41756146)
[»] chr5 (74 HSPs)
chr5 (25-100)||(39919058-39919133)
chr5 (25-104)||(1729512-1729591)
chr5 (25-107)||(42525430-42525520)
chr5 (25-104)||(39886165-39886252)
chr5 (66-107)||(10241375-10241416)
chr5 (69-104)||(2363052-2363087)
chr5 (69-104)||(8478846-8478881)
chr5 (66-105)||(13958461-13958500)
chr5 (25-104)||(39165047-39165126)
chr5 (66-104)||(4153626-4153664)
chr5 (25-100)||(4745833-4745916)
chr5 (25-100)||(8968779-8968862)
chr5 (25-100)||(9835063-9835146)
chr5 (66-100)||(11188639-11188673)
chr5 (66-104)||(11786013-11786051)
chr5 (66-104)||(11897327-11897365)
chr5 (25-100)||(12463786-12463869)
chr5 (66-104)||(15241475-15241513)
chr5 (66-104)||(16386694-16386732)
chr5 (66-104)||(16789149-16789187)
chr5 (66-104)||(16891425-16891463)
chr5 (25-100)||(17545129-17545212)
chr5 (26-100)||(17967575-17967649)
chr5 (66-100)||(22569202-22569236)
chr5 (25-100)||(25400324-25400407)
chr5 (54-104)||(27498644-27498694)
chr5 (66-104)||(32423644-32423682)
chr5 (25-100)||(35515542-35515625)
chr5 (66-104)||(41319404-41319442)
chr5 (25-100)||(42320347-42320430)
chr5 (66-104)||(43580957-43580995)
chr5 (66-107)||(6414146-6414187)
chr5 (66-107)||(18026778-18026819)
chr5 (66-107)||(27798700-27798741)
chr5 (66-107)||(29045948-29045989)
chr5 (66-102)||(6526129-6526165)
chr5 (25-97)||(4417645-4417725)
chr5 (66-101)||(18050258-18050293)
chr5 (66-101)||(18638677-18638712)
chr5 (66-100)||(2301528-2301562)
chr5 (66-100)||(2848292-2848326)
chr5 (25-71)||(5966859-5966905)
chr5 (66-100)||(6518733-6518767)
chr5 (66-96)||(8148997-8149027)
chr5 (66-100)||(10404206-10404240)
chr5 (66-100)||(10905093-10905127)
chr5 (25-71)||(11774453-11774499)
chr5 (66-100)||(11795572-11795606)
chr5 (25-71)||(14641103-14641149)
chr5 (66-100)||(21749335-21749369)
chr5 (66-104)||(22732319-22732357)
chr5 (66-100)||(25648041-25648075)
chr5 (66-100)||(27765336-27765370)
chr5 (66-100)||(29691436-29691470)
chr5 (25-71)||(32505718-32505764)
chr5 (66-104)||(34389566-34389604)
chr5 (66-104)||(35241474-35241512)
chr5 (66-104)||(36124478-36124516)
chr5 (66-100)||(40081957-40081991)
chr5 (73-102)||(8571878-8571907)
chr5 (66-107)||(13876271-13876312)
chr5 (66-107)||(16280325-16280366)
chr5 (66-107)||(19273163-19273204)
chr5 (66-107)||(19985579-19985620)
chr5 (66-107)||(20707737-20707778)
chr5 (67-100)||(21962062-21962095)
chr5 (26-71)||(29154874-29154918)
chr5 (66-99)||(36888353-36888386)
chr5 (66-107)||(42367009-42367050)
chr5 (66-98)||(25729399-25729431)
chr5 (72-100)||(28308319-28308347)
chr5 (25-57)||(31700392-31700424)
chr5 (72-100)||(36735957-36735985)
chr5 (27-71)||(37034838-37034882)
[»] chr7 (72 HSPs)
chr7 (25-99)||(21388553-21388627)
chr7 (25-104)||(48288362-48288441)
chr7 (25-100)||(47255047-47255122)
chr7 (25-100)||(10244846-10244929)
chr7 (25-104)||(24061282-24061369)
chr7 (25-100)||(32619380-32619463)
chr7 (25-104)||(36174420-36174507)
chr7 (66-104)||(3529859-3529897)
chr7 (66-104)||(7401340-7401378)
chr7 (25-100)||(13720800-13720883)
chr7 (25-107)||(13730048-13730137)
chr7 (25-100)||(15238919-15239002)
chr7 (66-100)||(19331457-19331491)
chr7 (25-100)||(26801686-26801769)
chr7 (25-100)||(27510214-27510297)
chr7 (66-104)||(29281295-29281333)
chr7 (25-100)||(29617435-29617518)
chr7 (25-100)||(31026249-31026332)
chr7 (66-104)||(31077856-31077894)
chr7 (25-104)||(46534701-46534788)
chr7 (66-100)||(48119549-48119583)
chr7 (66-100)||(48719878-48719912)
chr7 (66-99)||(5804934-5804967)
chr7 (66-107)||(11453632-11453673)
chr7 (66-107)||(32047168-32047209)
chr7 (25-99)||(32676900-32676982)
chr7 (69-100)||(9697848-9697879)
chr7 (67-98)||(36622253-36622284)
chr7 (73-104)||(38151429-38151460)
chr7 (66-101)||(48269342-48269377)
chr7 (66-104)||(2229054-2229092)
chr7 (66-100)||(3062853-3062887)
chr7 (70-104)||(3532661-3532695)
chr7 (25-71)||(3766841-3766887)
chr7 (66-100)||(4960863-4960897)
chr7 (66-104)||(5990099-5990137)
chr7 (66-100)||(7525523-7525557)
chr7 (66-100)||(7691950-7691984)
chr7 (66-100)||(8174195-8174229)
chr7 (66-104)||(12615830-12615868)
chr7 (66-100)||(12640546-12640580)
chr7 (66-104)||(15074856-15074894)
chr7 (69-107)||(15694631-15694669)
chr7 (69-107)||(15701611-15701649)
chr7 (77-107)||(16861319-16861349)
chr7 (66-100)||(19752925-19752959)
chr7 (66-100)||(21762849-21762883)
chr7 (66-100)||(24508905-24508939)
chr7 (25-71)||(24692505-24692551)
chr7 (66-104)||(24732504-24732542)
chr7 (66-100)||(24781109-24781143)
chr7 (25-71)||(25318530-25318576)
chr7 (66-100)||(25833634-25833668)
chr7 (66-100)||(28547738-28547772)
chr7 (66-100)||(30388464-30388498)
chr7 (66-104)||(30940850-30940888)
chr7 (66-100)||(32856874-32856908)
chr7 (66-100)||(35645678-35645712)
chr7 (66-100)||(35950207-35950241)
chr7 (25-59)||(37300105-37300139)
chr7 (66-100)||(38889450-38889484)
chr7 (66-104)||(42182151-42182189)
chr7 (66-100)||(43119389-43119423)
chr7 (66-100)||(43633047-43633081)
chr7 (66-104)||(44616681-44616719)
chr7 (73-106)||(7836888-7836921)
chr7 (66-107)||(32826523-32826564)
chr7 (73-106)||(45284771-45284804)
chr7 (66-106)||(2527340-2527380)
chr7 (66-106)||(35815917-35815957)
chr7 (66-98)||(36391863-36391895)
chr7 (76-104)||(49089588-49089616)
[»] chr4 (83 HSPs)
chr4 (25-100)||(9661580-9661655)
chr4 (25-101)||(14944493-14944569)
chr4 (25-100)||(44602515-44602590)
chr4 (66-104)||(47934025-47934063)
chr4 (66-104)||(3763961-3763999)
chr4 (66-100)||(4700895-4700929)
chr4 (25-100)||(6371144-6371227)
chr4 (66-104)||(10417174-10417212)
chr4 (25-100)||(12581985-12582068)
chr4 (66-104)||(16342026-16342064)
chr4 (66-104)||(22788627-22788665)
chr4 (66-100)||(31852570-31852604)
chr4 (66-100)||(37935940-37935974)
chr4 (66-104)||(39696291-39696329)
chr4 (25-100)||(43147341-43147424)
chr4 (25-100)||(43596925-43597008)
chr4 (25-100)||(46774987-46775070)
chr4 (66-100)||(48569133-48569167)
chr4 (25-100)||(49447151-49447234)
chr4 (25-100)||(52731396-52731479)
chr4 (66-104)||(55021633-55021671)
chr4 (66-107)||(12504593-12504634)
chr4 (69-104)||(13264227-13264262)
chr4 (69-100)||(13564225-13564256)
chr4 (73-104)||(42664066-42664097)
chr4 (73-104)||(51759613-51759644)
chr4 (25-97)||(55251311-55251391)
chr4 (25-71)||(637129-637175)
chr4 (25-71)||(1458012-1458058)
chr4 (66-100)||(2222618-2222652)
chr4 (66-100)||(3036012-3036046)
chr4 (25-104)||(4234238-4234325)
chr4 (66-100)||(4590325-4590359)
chr4 (25-71)||(5179876-5179922)
chr4 (66-100)||(5304967-5305001)
chr4 (66-104)||(8564250-8564288)
chr4 (66-104)||(9761194-9761232)
chr4 (66-100)||(10141062-10141096)
chr4 (66-100)||(10402520-10402554)
chr4 (66-100)||(10406986-10407020)
chr4 (66-104)||(12267597-12267635)
chr4 (66-104)||(15208601-15208639)
chr4 (66-104)||(21935556-21935594)
chr4 (25-71)||(22230428-22230474)
chr4 (66-104)||(29771252-29771290)
chr4 (66-104)||(33325508-33325546)
chr4 (66-100)||(35948140-35948174)
chr4 (66-104)||(37251192-37251230)
chr4 (66-100)||(40051701-40051735)
chr4 (66-100)||(40994060-40994094)
chr4 (66-104)||(41854212-41854250)
chr4 (66-100)||(42218829-42218863)
chr4 (25-71)||(42231542-42231588)
chr4 (66-104)||(42395306-42395344)
chr4 (25-71)||(45112105-45112151)
chr4 (66-100)||(45126211-45126245)
chr4 (66-100)||(45849126-45849160)
chr4 (25-71)||(46105565-46105611)
chr4 (66-104)||(46582713-46582751)
chr4 (66-104)||(46998321-46998359)
chr4 (66-100)||(48744286-48744320)
chr4 (66-104)||(48825772-48825810)
chr4 (66-96)||(48949708-48949738)
chr4 (66-100)||(48950863-48950897)
chr4 (25-71)||(49056805-49056851)
chr4 (66-100)||(49757241-49757275)
chr4 (66-100)||(49901561-49901595)
chr4 (66-104)||(52798356-52798394)
chr4 (66-100)||(53634208-53634242)
chr4 (66-100)||(55536458-55536492)
chr4 (66-104)||(56087907-56087945)
chr4 (67-104)||(194630-194667)
chr4 (66-99)||(8433581-8433614)
chr4 (66-107)||(25726259-25726300)
chr4 (66-107)||(30217678-30217719)
chr4 (66-99)||(31016414-31016447)
chr4 (66-107)||(37868517-37868558)
chr4 (73-106)||(51890882-51890915)
chr4 (31-71)||(17709454-17709494)
chr4 (71-107)||(19963866-19963902)
chr4 (66-106)||(27103052-27103092)
chr4 (66-94)||(27434113-27434141)
chr4 (66-98)||(42916790-42916822)
[»] chr2 (50 HSPs)
chr2 (25-96)||(19612745-19612816)
chr2 (25-104)||(37063550-37063629)
chr2 (25-107)||(40931166-40931247)
chr2 (25-100)||(38387693-38387768)
chr2 (66-104)||(41187338-41187376)
chr2 (66-107)||(3439027-3439068)
chr2 (66-107)||(37486883-37486924)
chr2 (55-99)||(9937486-9937530)
chr2 (25-100)||(4562709-4562792)
chr2 (66-104)||(16754762-16754800)
chr2 (25-100)||(20296448-20296531)
chr2 (66-104)||(28153095-28153133)
chr2 (66-100)||(29772235-29772269)
chr2 (25-100)||(30390326-30390409)
chr2 (25-100)||(41509546-41509629)
chr2 (66-100)||(41566841-41566875)
chr2 (25-99)||(2643727-2643809)
chr2 (66-107)||(18278367-18278408)
chr2 (66-107)||(22653594-22653635)
chr2 (66-107)||(28194711-28194752)
chr2 (25-104)||(3287010-3287096)
chr2 (66-106)||(34614058-34614098)
chr2 (25-93)||(38179217-38179285)
chr2 (69-104)||(8742777-8742812)
chr2 (66-100)||(1260263-1260297)
chr2 (66-100)||(1309083-1309117)
chr2 (66-100)||(1844896-1844930)
chr2 (66-100)||(5613033-5613067)
chr2 (66-100)||(6331640-6331674)
chr2 (66-100)||(16384999-16385033)
chr2 (66-100)||(17499028-17499062)
chr2 (66-100)||(18694864-18694898)
chr2 (66-96)||(28692446-28692476)
chr2 (66-104)||(29449527-29449565)
chr2 (29-71)||(30849766-30849808)
chr2 (66-104)||(30932399-30932437)
chr2 (66-100)||(33228890-33228924)
chr2 (66-100)||(38400393-38400427)
chr2 (66-100)||(40473507-40473541)
chr2 (66-100)||(40535406-40535440)
chr2 (70-104)||(43895996-43896030)
chr2 (66-104)||(44186522-44186560)
chr2 (70-104)||(44948679-44948713)
chr2 (66-99)||(5474986-5475019)
chr2 (67-100)||(5521177-5521210)
chr2 (30-71)||(20972843-20972884)
chr2 (66-99)||(39408648-39408681)
chr2 (69-101)||(13975208-13975240)
chr2 (66-94)||(14215961-14215989)
chr2 (29-57)||(36072606-36072634)
[»] chr1 (65 HSPs)
chr1 (25-100)||(46021844-46021919)
chr1 (25-100)||(3269649-3269724)
chr1 (66-104)||(3560334-3560372)
chr1 (25-100)||(1570149-1570232)
chr1 (25-100)||(4482555-4482638)
chr1 (25-100)||(6438021-6438104)
chr1 (66-100)||(7166184-7166218)
chr1 (66-100)||(11215080-11215114)
chr1 (25-100)||(15819558-15819641)
chr1 (66-100)||(18467155-18467189)
chr1 (25-100)||(18534031-18534114)
chr1 (66-100)||(19011434-19011468)
chr1 (66-100)||(22563465-22563499)
chr1 (66-104)||(27642680-27642718)
chr1 (66-104)||(29188715-29188753)
chr1 (66-100)||(45333669-45333703)
chr1 (66-100)||(45517225-45517259)
chr1 (25-100)||(46965770-46965853)
chr1 (66-100)||(51050269-51050303)
chr1 (63-104)||(1836571-1836612)
chr1 (67-104)||(9866137-9866174)
chr1 (25-99)||(16343058-16343140)
chr1 (66-98)||(51942373-51942405)
chr1 (66-101)||(25999929-25999964)
chr1 (66-100)||(2277833-2277867)
chr1 (66-104)||(2754439-2754477)
chr1 (66-104)||(3694869-3694907)
chr1 (66-100)||(7191111-7191145)
chr1 (66-100)||(8984463-8984497)
chr1 (66-100)||(12048081-12048115)
chr1 (66-100)||(12502211-12502245)
chr1 (66-100)||(12650341-12650375)
chr1 (66-104)||(13538399-13538437)
chr1 (66-100)||(13773247-13773281)
chr1 (66-100)||(15390299-15390333)
chr1 (66-104)||(16313659-16313697)
chr1 (25-71)||(16526171-16526217)
chr1 (25-71)||(18551627-18551673)
chr1 (66-100)||(21265735-21265769)
chr1 (66-100)||(27818647-27818681)
chr1 (66-100)||(28564302-28564336)
chr1 (66-100)||(32594330-32594364)
chr1 (66-100)||(32970758-32970792)
chr1 (66-104)||(33218842-33218880)
chr1 (73-103)||(33736853-33736883)
chr1 (66-104)||(35283580-35283618)
chr1 (66-104)||(36726640-36726678)
chr1 (66-100)||(40519500-40519534)
chr1 (66-100)||(42458160-42458194)
chr1 (66-104)||(43884873-43884911)
chr1 (66-104)||(44732712-44732750)
chr1 (66-104)||(46225457-46225495)
chr1 (25-71)||(50899504-50899550)
chr1 (66-104)||(52369676-52369714)
chr1 (73-106)||(26824276-26824309)
chr1 (73-106)||(31124590-31124623)
chr1 (73-106)||(34557275-34557308)
chr1 (66-107)||(39346929-39346970)
chr1 (66-99)||(47642940-47642973)
chr1 (67-107)||(7961783-7961823)
chr1 (66-102)||(21401388-21401424)
chr1 (66-106)||(34580737-34580777)
chr1 (66-98)||(34656354-34656386)
chr1 (68-100)||(48643704-48643736)
chr1 (72-100)||(50899460-50899488)
[»] scaffold0009 (1 HSPs)
scaffold0009 (25-100)||(266662-266737)
[»] chr6 (52 HSPs)
chr6 (25-104)||(894593-894672)
chr6 (25-100)||(4408388-4408463)
chr6 (66-104)||(3640593-3640631)
chr6 (66-104)||(26347483-26347521)
chr6 (25-104)||(31802083-31802170)
chr6 (66-104)||(2426143-2426181)
chr6 (66-104)||(3012676-3012714)
chr6 (66-100)||(3795731-3795765)
chr6 (25-100)||(7207874-7207957)
chr6 (66-100)||(7425445-7425479)
chr6 (66-104)||(7545408-7545446)
chr6 (66-104)||(12284200-12284238)
chr6 (25-100)||(17441796-17441879)
chr6 (25-100)||(19953785-19953868)
chr6 (66-104)||(22997415-22997453)
chr6 (66-104)||(23790948-23790986)
chr6 (25-100)||(27218914-27218997)
chr6 (66-104)||(31803548-31803586)
chr6 (66-100)||(32166448-32166482)
chr6 (25-100)||(32611511-32611594)
chr6 (28-100)||(8857123-8857196)
chr6 (66-107)||(9435705-9435746)
chr6 (69-100)||(20729033-20729064)
chr6 (66-104)||(743642-743680)
chr6 (66-100)||(2816969-2817003)
chr6 (66-100)||(3794130-3794164)
chr6 (66-100)||(5052031-5052065)
chr6 (66-100)||(7328604-7328638)
chr6 (66-100)||(7414403-7414437)
chr6 (66-100)||(7581123-7581157)
chr6 (66-100)||(9704495-9704529)
chr6 (66-100)||(10517278-10517312)
chr6 (25-71)||(10934629-10934675)
chr6 (66-100)||(13116581-13116615)
chr6 (66-100)||(15963900-15963934)
chr6 (69-107)||(18071615-18071653)
chr6 (66-100)||(19892233-19892267)
chr6 (66-104)||(20584152-20584190)
chr6 (66-104)||(22574949-22574987)
chr6 (66-100)||(28148690-28148724)
chr6 (66-100)||(30885527-30885561)
chr6 (66-100)||(33573896-33573930)
chr6 (66-100)||(33646914-33646948)
chr6 (66-99)||(7865313-7865346)
chr6 (66-99)||(10913037-10913070)
chr6 (66-99)||(13158667-13158700)
chr6 (66-99)||(13163523-13163556)
chr6 (67-104)||(24618452-24618489)
chr6 (67-100)||(28842734-28842767)
chr6 (66-103)||(30916400-30916437)
chr6 (66-106)||(2500465-2500505)
chr6 (66-98)||(7418357-7418389)
[»] chr3 (95 HSPs)
chr3 (33-104)||(39169799-39169870)
chr3 (29-104)||(45871051-45871126)
chr3 (54-100)||(6447089-6447135)
chr3 (25-107)||(21405193-21405274)
chr3 (66-104)||(38819277-38819315)
chr3 (66-100)||(3748559-3748593)
chr3 (66-104)||(3894623-3894661)
chr3 (25-100)||(4139030-4139113)
chr3 (66-100)||(6488203-6488237)
chr3 (25-100)||(6919920-6920003)
chr3 (66-104)||(11820083-11820121)
chr3 (66-100)||(17218567-17218601)
chr3 (66-104)||(17729070-17729108)
chr3 (25-100)||(18194368-18194451)
chr3 (66-104)||(19030299-19030337)
chr3 (25-71)||(19591573-19591619)
chr3 (66-100)||(22501888-22501922)
chr3 (66-104)||(24430228-24430266)
chr3 (25-100)||(32144614-32144697)
chr3 (66-100)||(33606897-33606931)
chr3 (66-100)||(34757595-34757629)
chr3 (25-100)||(37800568-37800651)
chr3 (25-100)||(40548333-40548416)
chr3 (25-100)||(40933788-40933871)
chr3 (66-104)||(40963664-40963702)
chr3 (25-100)||(50234154-50234237)
chr3 (25-100)||(50496771-50496854)
chr3 (66-104)||(52410194-52410232)
chr3 (66-104)||(54626421-54626459)
chr3 (66-107)||(9220203-9220244)
chr3 (25-99)||(10176861-10176943)
chr3 (25-99)||(31327676-31327758)
chr3 (66-99)||(49194650-49194683)
chr3 (66-107)||(51467266-51467307)
chr3 (67-107)||(15492171-15492211)
chr3 (25-93)||(49728728-49728796)
chr3 (25-98)||(52974012-52974093)
chr3 (25-104)||(20489845-20489924)
chr3 (66-101)||(34898723-34898758)
chr3 (25-71)||(2007077-2007123)
chr3 (66-100)||(2523005-2523039)
chr3 (66-100)||(4541976-4542010)
chr3 (66-104)||(4860240-4860278)
chr3 (66-104)||(4880248-4880286)
chr3 (66-100)||(7270034-7270068)
chr3 (66-100)||(7920399-7920433)
chr3 (66-100)||(8964733-8964767)
chr3 (66-100)||(10482810-10482844)
chr3 (66-100)||(13638202-13638236)
chr3 (66-100)||(14887309-14887343)
chr3 (70-100)||(15299155-15299185)
chr3 (66-100)||(17608276-17608310)
chr3 (66-104)||(23164106-23164144)
chr3 (66-100)||(27669000-27669034)
chr3 (66-100)||(28550270-28550304)
chr3 (66-100)||(28689629-28689663)
chr3 (66-100)||(30555184-30555218)
chr3 (66-100)||(30779524-30779558)
chr3 (66-104)||(31316713-31316751)
chr3 (66-100)||(31327458-31327492)
chr3 (66-104)||(32256507-32256545)
chr3 (66-100)||(33706684-33706718)
chr3 (66-104)||(34579411-34579449)
chr3 (66-100)||(37488417-37488451)
chr3 (66-100)||(39720014-39720048)
chr3 (66-96)||(39966035-39966065)
chr3 (66-100)||(41936364-41936398)
chr3 (66-100)||(44764527-44764561)
chr3 (66-100)||(45198802-45198836)
chr3 (66-104)||(45512948-45512986)
chr3 (66-100)||(45551766-45551800)
chr3 (66-100)||(45701423-45701457)
chr3 (66-100)||(48251651-48251685)
chr3 (66-104)||(48739697-48739735)
chr3 (77-107)||(48887351-48887381)
chr3 (25-71)||(49447168-49447214)
chr3 (66-100)||(50675699-50675733)
chr3 (66-100)||(53432694-53432728)
chr3 (66-100)||(53578034-53578068)
chr3 (66-100)||(53752657-53752691)
chr3 (66-100)||(55007980-55008014)
chr3 (66-99)||(16906777-16906810)
chr3 (73-106)||(24303475-24303508)
chr3 (66-107)||(25279009-25279050)
chr3 (66-107)||(31528908-31528949)
chr3 (66-99)||(33225306-33225339)
chr3 (66-107)||(40910130-40910171)
chr3 (73-106)||(44764805-44764838)
chr3 (70-107)||(44827199-44827236)
chr3 (66-99)||(47098811-47098844)
chr3 (66-99)||(53347248-53347281)
chr3 (67-100)||(53906459-53906492)
chr3 (66-98)||(17472289-17472321)
chr3 (66-98)||(19866550-19866582)
chr3 (30-66)||(27739805-27739841)
[»] scaffold0121 (1 HSPs)
scaffold0121 (25-104)||(12024-12111)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-104)||(59813-59900)
[»] scaffold0608 (1 HSPs)
scaffold0608 (25-100)||(8996-9079)
[»] scaffold0445 (1 HSPs)
scaffold0445 (66-100)||(3971-4005)
[»] scaffold0079 (1 HSPs)
scaffold0079 (66-104)||(50797-50835)
[»] scaffold0276 (1 HSPs)
scaffold0276 (66-107)||(1339-1380)
[»] scaffold0157 (1 HSPs)
scaffold0157 (66-107)||(15843-15884)
[»] scaffold0031 (2 HSPs)
scaffold0031 (66-107)||(93932-93973)
scaffold0031 (66-104)||(49954-49992)
[»] scaffold1185 (1 HSPs)
scaffold1185 (66-100)||(2350-2384)
[»] scaffold0690 (1 HSPs)
scaffold0690 (66-100)||(3745-3779)
[»] scaffold0460 (1 HSPs)
scaffold0460 (66-100)||(12538-12572)
[»] scaffold0366 (1 HSPs)
scaffold0366 (25-71)||(854-900)
[»] scaffold0330 (1 HSPs)
scaffold0330 (66-104)||(6847-6885)
[»] scaffold0187 (2 HSPs)
scaffold0187 (25-71)||(11114-11160)
scaffold0187 (25-71)||(21442-21488)
[»] scaffold0128 (1 HSPs)
scaffold0128 (66-100)||(17699-17733)
[»] scaffold0088 (1 HSPs)
scaffold0088 (66-100)||(10783-10817)
[»] scaffold0068 (1 HSPs)
scaffold0068 (66-104)||(45989-46027)
[»] scaffold0028 (1 HSPs)
scaffold0028 (66-100)||(112187-112221)
[»] scaffold0014 (1 HSPs)
scaffold0014 (66-100)||(12218-12252)
[»] scaffold0002 (1 HSPs)
scaffold0002 (66-100)||(8782-8816)
[»] scaffold0394 (1 HSPs)
scaffold0394 (66-99)||(1341-1374)
[»] scaffold0254 (1 HSPs)
scaffold0254 (66-99)||(1396-1429)


Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 84)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 174 - 446
Target Start/End: Original strand, 43600246 - 43600515
Alignment:
Q  174 gtatccataaaatgtaaaagaatactccctctagttcataataagtgccaaattttattaagatactattatcaannnnnnnnn-atcaagatactttta 272  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||    
T  43600246 gtatccataaaatgttaaagaatactccctctagttcataataagtgccaaattttattaagatactattatcaattttttttttatcaaaatactttta 43600345  T
Q  273 tctattaaatttgatttcacttaattatgtaaactatgcagacgtgttgtatccgagtaaagttgagattggtgttaggttctcaaaatcacatcatacg 372  Q
    |||||||||||| ||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43600346 tctattaaatttcatttcactta----tgtaaactatgcagacgtgttgtatccgagtaaagttgagattggtgttaggttctcaaaatcacatcatacg 43600441  T
Q  373 cgcttgcttccgtttcttgtggcgccatttctcctacatgtataattaacctttccttccttcgatcacttata 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43600442 cgcttgcttccgtttcttgtggcgccatttctcctacatgtataattaacctttccttccttcgatcacttata 43600515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 43600098 - 43600180
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||| ||||||| |||||||| || ||| ||||||||||    
T  43600098 ttgcatattatatgtaggggtcggagttcgaaccccgtacactccacagtttaattatgtgagctttaaccattagactattt 43600180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 3189989 - 3189916
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| |||   ||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3189989 ttgcatattatatgcaggt--cggggttcgaaccccggacactccacaattaaattgtgtgagctctagccactag 3189916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 6942571 - 6942484
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||||||    
T  6942571 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagacta 6942484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 13647448 - 13647410
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13647448 ctccacaatttaattgtgtgagctctagccactagacta 13647410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 13747873 - 13747835
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13747873 ctccacaatttaattgtgtgagctctagccactagacta 13747835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 43284006 - 43283919
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||        ||||| ||||||||||||||||||||||||||||    
T  43284006 ttgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactagacta 43283919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 43656115 - 43656153
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43656115 ctccacaatttaattgtgtgagctctagccactagacta 43656153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 1337155 - 1337065
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||| ||||||    
T  1337155 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctattt 1337065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 94551 - 94505
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||||    
T  94551 ttgcatattatatgcaggagccggagttcgaaccccggacactccac 94505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 2787121 - 2787038
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  2787121 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 2787038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 5332995 - 5333033
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5332995 ctccacaattaaattgtgtgagctctagccactagacta 5333033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 8265347 - 8265381
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  8265347 ctccacaatttaattgtgtgagctctagccactag 8265381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 8827888 - 8827850
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  8827888 ctccacaatttaattgtgtgagctctagtcactagacta 8827850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 9407469 - 9407507
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  9407469 ctccacaatttaattgtgtgagctctagccactaaacta 9407507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 10736914 - 10736831
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  10736914 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 10736831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 11491876 - 11491914
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11491876 ctccacaattaaattgtgtgagctctagccactagacta 11491914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 16449204 - 16449238
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  16449204 ctccacaatttaattgtgtgagctctagccactag 16449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 23178931 - 23178848
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  23178931 ttgcatattatatgcaggggccggggttcgaaccccggacactccacttcttcacaatttaattgtgtgagctctagccactag 23178848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 26022326 - 26022364
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  26022326 ctccacaatttaattgtgtgacctctagccactagacta 26022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 37717393 - 37717476
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  37717393 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 37717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 38344128 - 38344166
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  38344128 ctccacaattaaattgtgtgagctctagccactagacta 38344166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 39169564 - 39169598
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  39169564 ctccacaatttaattgtgtgagctctagccactag 39169598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 40298771 - 40298809
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  40298771 ctccacaatttaattgtgtgaactctagccactagacta 40298809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 42880978 - 42881024
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||    
T  42880978 ttgcatattatatgtaggagccggggttcgaaccccggacactccac 42881024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 3227313 - 3227354
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||||| ||||    
T  3227313 ctccacaattaaattgtgtgagctctagccactagacaattt 3227354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 13406630 - 13406712
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||| ||||||||||||| |||||| | |||        |||||||||| |||||||||||||||||||||||    
T  13406630 ttgcatattatatgcaggagccggagttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccacta 13406712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 24571891 - 24571850
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  24571891 ctccacaatttaattatgtgagctctagccattagactattt 24571850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 44673638 - 44673601
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  44673638 tccacaattaaattgtgtgagctctagccactagacta 44673601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 4654100 - 4654068
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||||||||||||||||||||||||||    
T  4654100 ctccacaatttaattgtgtgagctctagccact 4654068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 7388534 - 7388565
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccac 97  Q
    ||||||||||||||||||||||||||||||||    
T  7388534 ctccacaatttaattgtgtgagctctagccac 7388565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 7813542 - 7813507
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||| |||||    
T  7813542 cacaatttaattgtgtgagctctagccactggacta 7813507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 24458402 - 24458433
Alignment:
Q  73 atttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||||    
T  24458402 atttaattgtgtgagctctagccactagacta 24458433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 257618 - 257652
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  257618 ctccacaattaaattgtgtgagctctagccactag 257652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 658302 - 658268
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  658302 ctccacaattaaattgtgtgagctctagccactag 658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 844038 - 844004
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  844038 ctccacaattaaattgtgtgagctctagccactag 844004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 2792858 - 2792896
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  2792858 ctccacaatttaattgtgtgagctccaaccactagacta 2792896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 5570973 - 5571011
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  5570973 ctccacaattaaattatgtgagctctagccactagacta 5571011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 6659319 - 6659365
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  6659319 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 6659365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 6739721 - 6739767
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  6739721 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 6739767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 7194292 - 7194338
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  7194292 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 7194338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7816482 - 7816516
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  7816482 ctccacaattaaattgtgtgagctctagccactag 7816516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 9187214 - 9187180
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  9187214 ctccacaattaaattgtgtgagctctagccactag 9187180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 10200721 - 10200675
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  10200721 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 10200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 10568164 - 10568198
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10568164 ctccacaattaaattgtgtgagctctagccactag 10568198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 10594256 - 10594210
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||| ||||||| ||||||||| ||| ||||||||||||||||||    
T  10594256 ttgcattttatatgcaggagccggggttcgaaccccgtacactccac 10594210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 10761898 - 10761932
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10761898 ctccacaattaaattgtgtgagctctagccactag 10761932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 13773432 - 13773390
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacact 67  Q
    |||||||||||||||||||||||| ||| |||||||| |||||    
T  13773432 ttgcatattatatgtaggagccggggttcgaaccccggacact 13773390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 16432119 - 16432085
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||| |||||||||||||||||||||||||||||    
T  16432119 ctccataatttaattgtgtgagctctagccactag 16432085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 17027872 - 17027838
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17027872 ctccacaattaaattgtgtgagctctagccactag 17027838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 17072554 - 17072520
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17072554 ctccacaattaaattgtgtgagctctagccactag 17072520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 17558308 - 17558274
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17558308 ctccacaattaaattgtgtgagctctagccactag 17558274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 17575717 - 17575751
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17575717 ctccacaattaaattgtgtgagctctagccactag 17575751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 17698601 - 17698635
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17698601 ctccacaattaaattgtgtgagctctagccactag 17698635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 18926126 - 18926088
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  18926126 ctccacaattaaattgtgtgagctctagccattagacta 18926088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 21133086 - 21133120
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  21133086 ctccacaattaaattgtgtgagctctagccactag 21133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 23858276 - 23858310
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  23858276 ctccacaatttaattgtgtgagttctagccactag 23858310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 24480812 - 24480774
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  24480812 ctccacaattaaattatgtgagctctagccactagacta 24480774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 28909544 - 28909578
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  28909544 ctccacaattaaattgtgtgagctctagccactag 28909578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 29170844 - 29170882
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  29170844 ctccacaattaaattgtgtgagttctagccactagacta 29170882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 29514705 - 29514739
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  29514705 ctccacaattaaattgtgtgagctctagccactag 29514739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 29716890 - 29716936
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  29716890 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 29716936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 29729198 - 29729232
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||| ||||||    
T  29729198 ctccacaatttaattgtgtgagctctagtcactag 29729232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 31450948 - 31450914
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  31450948 ctccacaattaaattgtgtgagctctagccactag 31450914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 33838403 - 33838437
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  33838403 ctccacaattaaattgtgtgagctctagccactag 33838437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 34266091 - 34266125
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  34266091 ctccacaattaaattgtgtgagctctagccactag 34266125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 34413092 - 34413138
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  34413092 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 34413138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 37291001 - 37291035
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  37291001 ctccacaattaaattgtgtgagctctagccactag 37291035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 38219559 - 38219525
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  38219559 ctccacaattaaattgtgtgagctctagccactag 38219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 39587626 - 39587660
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  39587626 ctccacaattaaattgtgtgagctctagccactag 39587660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 43186932 - 43186966
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  43186932 ctccacaattaaattgtgtgagctctagccactag 43186966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 43403371 - 43403409
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  43403371 ctccacaattaaattgtgtgagctctagctactagacta 43403409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 2626056 - 2626023
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  2626056 ctccacaattaaattgtgtgagctctagccacta 2626023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 7763930 - 7763897
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  7763930 ctccacaattaaattgtgtgagctctagccacta 7763897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 10573180 - 10573217
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagact 103  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  10573180 ctccacaatttaattgtgcgagctctagccaccagact 10573217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 10984486 - 10984527
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||| |||| ||||||||||||||| ||||||    
T  10984486 ctccacaatttaatggtgtaagctctagccactaggctattt 10984527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 11127982 - 11128015
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||| ||||||||||||||||||||||||    
T  11127982 tccacaattaaattgtgtgagctctagccactag 11128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 28536243 - 28536202
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| ||||||||||| ||||||||||||| |||||    
T  28536243 ctccacaattaaattgtgtgagttctagccactagattattt 28536202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 34472377 - 34472414
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  34472377 tccacaattaaattgtgtgagctctaaccactagacta 34472414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 95
Target Start/End: Original strand, 42035415 - 42035444
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagcc 95  Q
    ||||||||||||||||||||||||||||||    
T  42035415 ctccacaatttaattgtgtgagctctagcc 42035444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 43980304 - 43980271
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||||||||||||| |||||||||    
T  43980304 ctccacaatttaattgtgtgagctttagccacta 43980271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 12273667 - 12273627
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||||||||||||| |||| ||||||| ||||||    
T  12273667 tccacaatttaattgtgtgagttctaaccactaggctattt 12273627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 33604169 - 33604133
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagac 102  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  33604169 ctccacaattaaattgtgtgagttctagccactagac 33604133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 41756146 - 41756114
Alignment:
Q  75 ttaattgtgtgagctctagccactagactattt 107  Q
    |||||| ||||||||||||||||||||||||||    
T  41756146 ttaattatgtgagctctagccactagactattt 41756114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 39919133 - 39919058
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  39919133 ttgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtgtgagctctagccactag 39919058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 1729512 - 1729591
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||| || |  |||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||    
T  1729512 ttgcatattatatgtaggggctgaggtttgaaccccggacactctacaatttaattgtgtgagctctagtcactaaacta 1729591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 42525430 - 42525520
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||||||    
T  42525430 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagactattt 42525520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 39886252 - 39886165
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||| || ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||||||    
T  39886252 ttgcatattatatgtaggagctggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagacta 39886165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 10241375 - 10241416
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  10241375 ctccataatttaattgtgtgagctctagccactagactattt 10241416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 2363052 - 2363087
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  2363052 cacaatttaattgtgtgagctctagccactagacta 2363087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 8478881 - 8478846
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  8478881 cacaatttaattgtgtgagctctagccactagacta 8478846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 13958461 - 13958500
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactat 105  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  13958461 ctccataatttaattgtgtgagctctagccactagactat 13958500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 39165047 - 39165126
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| |||||| || ||| |||||||  |||||| |||||| ||||||||||||| ||| ||||| ||||    
T  39165047 ttgcatattatatgcaggagctggggttcgaaccccagacactctacaattaaattgtgtgagctttagtcactaaacta 39165126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 4153626 - 4153664
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4153626 ctccacaattaaattgtgtgagctctagccactagacta 4153664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 4745916 - 4745833
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  4745916 ttgcatattatatgaaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 4745833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 8968779 - 8968862
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  8968779 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 8968862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 9835063 - 9835146
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  9835063 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 9835146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 11188673 - 11188639
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  11188673 ctccacaatttaattgtgtgagctctagccactag 11188639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 11786051 - 11786013
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11786051 ctccacaattaaattgtgtgagctctagccactagacta 11786013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 11897327 - 11897365
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11897327 ctccacaattaaattgtgtgagctctagccactagacta 11897365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 12463786 - 12463869
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  12463786 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 12463869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 15241475 - 15241513
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  15241475 ctccacaattaaattgtgtgagctctagccactagacta 15241513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 16386732 - 16386694
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16386732 ctccacaattaaattgtgtgagctctagccactagacta 16386694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 16789149 - 16789187
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16789149 ctccacaattaaattgtgtgagctctagccactagacta 16789187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 16891425 - 16891463
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16891425 ctccacaattaaattgtgtgagctctagccactagacta 16891463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 17545212 - 17545129
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  17545212 ttgcatattatatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgagctctagccactag 17545129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 17967649 - 17967575
Alignment:
Q  26 tgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||| |  || ||| | |||||| || |||||||||| |||||||||||||||| |||||||    
T  17967649 tgcatattatatgtaggggtaggggttcgtaccccggacgctccacaattaaattgtgtgagctctaaccactag 17967575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 22569236 - 22569202
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  22569236 ctccacaatttaattgtgtgagctctagccactag 22569202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 25400407 - 25400324
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  25400407 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 25400324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 27498644 - 27498694
Alignment:
Q  54 gaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||| ||||    
T  27498644 gaaccccggacaatccacaattaaattgtgtgagctctagccactaaacta 27498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 32423644 - 32423682
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  32423644 ctccacaatttaattgtgtgagttctagccactagacta 32423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 35515542 - 35515625
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacact--------ccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||        |||||||| ||||||||||||||||||||||||    
T  35515542 ttgcatattatatgcaggagccggggttcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccactag 35515625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 41319442 - 41319404
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  41319442 ctccacaattaaattgtgtgagctctagccactagacta 41319404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 42320347 - 42320430
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||| ||||||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  42320347 ttgcatattatatgcaggagtcggagttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccactag 42320430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 43580957 - 43580995
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  43580957 ctccacaattaaattgtgtgagctctagccactagacta 43580995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 6414146 - 6414187
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  6414146 ctccacaattaaattgtgtgagctctagccactagtctattt 6414187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 18026819 - 18026778
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  18026819 ctccacaattaaattgtgtgagctctagccactatactattt 18026778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 27798700 - 27798741
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  27798700 ctccacaattaaattgtgtgagctctagccactaggctattt 27798741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 29045948 - 29045989
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  29045948 ctccacaatttaattgtgtgagctctaaccactaggctattt 29045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 6526129 - 6526165
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagac 102  Q
    |||||||||| ||||||||||||||||||||||||||    
T  6526129 ctccacaattaaattgtgtgagctctagccactagac 6526165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 4417725 - 4417645
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccac 97  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||    
T  4417725 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccac 4417645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 18050258 - 18050293
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactaga 101  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18050258 ctccacaatttaattgtgtgagctctagcaactaga 18050293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 18638677 - 18638712
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactaga 101  Q
    |||||||||| |||||||||||||||||||||||||    
T  18638677 ctccacaattaaattgtgtgagctctagccactaga 18638712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 2301562 - 2301528
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  2301562 ctccacaattaaattgtgtgagctctagccactag 2301528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 2848292 - 2848326
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  2848292 ctccacaattaaattgtgtgagctctagccactag 2848326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 5966859 - 5966905
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  5966859 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 5966905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 6518767 - 6518733
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  6518767 ctccacaattaaattgtgtgagctctagccactag 6518733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 8149027 - 8148997
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagcca 96  Q
    |||||||||||||||||||||||||||||||    
T  8149027 ctccacaatttaattgtgtgagctctagcca 8148997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 10404206 - 10404240
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10404206 ctccacaattaaattgtgtgagctctagccactag 10404240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 10905127 - 10905093
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||| ||||||||||||||||    
T  10905127 ctccacaatttaattgtgcgagctctagccactag 10905093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 11774499 - 11774453
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  11774499 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 11774453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 11795572 - 11795606
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  11795572 ctccacaattaaattgtgtgagctctagccactag 11795606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 14641149 - 14641103
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  14641149 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 14641103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 21749369 - 21749335
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  21749369 ctccacaattaaattgtgtgagctctagccactag 21749335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 22732357 - 22732319
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  22732357 ctccataatttaattgtgtgagctccagccactagacta 22732319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 25648075 - 25648041
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  25648075 ctccacaattaaattgtgtgagctctagccactag 25648041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 27765336 - 27765370
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  27765336 ctccacaattaaattgtgtgagctctagccactag 27765370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 29691436 - 29691470
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  29691436 ctccacaattaaattgtgtgagctctagccactag 29691470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 32505718 - 32505764
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  32505718 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 32505764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 34389604 - 34389566
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  34389604 ctccacaattaaattgtgtgagctcaagccactagacta 34389566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 35241474 - 35241512
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  35241474 ctccacaatttaattgtgtgagttttagccactagacta 35241512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 36124478 - 36124516
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  36124478 ctccacaatttaactgtgtgagctctaaccactagacta 36124516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 40081957 - 40081991
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  40081957 ctccacaattaaattgtgtgagctctagccactag 40081991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 102
Target Start/End: Original strand, 8571878 - 8571907
Alignment:
Q  73 atttaattgtgtgagctctagccactagac 102  Q
    ||||||||||||||||||||||||||||||    
T  8571878 atttaattgtgtgagctctagccactagac 8571907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 13876312 - 13876271
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||||| ||||||||||||| |||||| |||||||    
T  13876312 ctccacaatttaactgtgtgagctctaaccactaaactattt 13876271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 16280325 - 16280366
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||| || |||||||||||||||||||||||| ||||||    
T  16280325 ctccacatttaaattgtgtgagctctagccactaggctattt 16280366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 19273204 - 19273163
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||| |||| |||||||||||||||||||||||| ||||||    
T  19273204 ctccataattaaattgtgtgagctctagccactaggctattt 19273163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 19985579 - 19985620
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| ||||||||||||| || ||||||||||||||    
T  19985579 ctccacaattaaattgtgtgagctatatccactagactattt 19985620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 20707778 - 20707737
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||| |||| |||||    
T  20707778 ctccacaattaaattgtgtgagctctagccattagattattt 20707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 21962095 - 21962062
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||| ||||||||||||||||||||||||    
T  21962095 tccacaattaaattgtgtgagctctagccactag 21962062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 29154874 - 29154918
Alignment:
Q  26 tgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||    
T  29154874 tgcatattatatgtaggagccgg-gttcgaaccccggacactccac 29154918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 36888386 - 36888353
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  36888386 ctccacaattaaattgtgtgagctctagccacta 36888353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 42367009 - 42367050
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||| ||||||||| ||||||||||||||    
T  42367009 ctccacaattaaattgtatgagctctaaccactagactattt 42367050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 25729431 - 25729399
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||| ||||||||||||||||||||||    
T  25729431 ctccacaattaaattgtgtgagctctagccact 25729399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 28308319 - 28308347
Alignment:
Q  72 aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||    
T  28308319 aatttaattgtgtgagctctagccactag 28308347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 31700424 - 31700392
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaac 57  Q
    ||||||||||||||||||||| |||||||||||    
T  31700424 ttgcatattatatgtaggagctggagtttgaac 31700392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 36735957 - 36735985
Alignment:
Q  72 aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||    
T  36735957 aatttaattgtgtgagctctagccactag 36735985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 37034838 - 37034882
Alignment:
Q  27 gcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||| ||||||| ||||||||||||| |||||||| |||||||||    
T  37034838 gcattttatatgcaggagccggagttcgaaccccggacactccac 37034882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 21388553 - 21388627
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  21388553 ttgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtgtgagctctagccacta 21388627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 48288441 - 48288362
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||  ||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  48288441 ttgcatattatatgcaggagccgaggttcgaatcccggacactccacaattaaattgtgtgagctctagccactagacta 48288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 47255122 - 47255047
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||| || ||||||||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  47255122 ttgcatattatctgcaggagccggggttcgaaccccggacacttcacaattaaattgtgtgagctctagccactag 47255047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 10244929 - 10244846
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacac--------tccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||| |||||||| ||||        ||||||||| ||||||||||||||||||||||||    
T  10244929 ttgcatattatatgtaggagccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactag 10244846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 24061369 - 24061282
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||||||    
T  24061369 ttgcatattatatgcaggagccggggttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccactagacta 24061282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 32619380 - 32619463
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  32619380 ttgcatattatatgtaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 32619463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 36174420 - 36174507
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||||||    
T  36174420 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttttccacaattaaattgtgtgagctctagccactagacta 36174507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 3529859 - 3529897
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  3529859 ctccacaattaaattgtgtgagctctagccactagacta 3529897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 7401378 - 7401340
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  7401378 ctccacaattaaattgtgtgagctctagccactagacta 7401340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 13720800 - 13720883
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  13720800 ttgcatattatatgcaggggccggggttcgaaccccgaacactccacttctccaaaatttaattgtgtgagctctagccactag 13720883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 13730137 - 13730048
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca------ca-atttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||      || ||||||||||||||||||||| |||||| ||||||    
T  13730137 ttgcatattatatgcaggggccggggtttgaaccccggacactccatttctccatatttaattgtgtgagctctagtcactaggctattt 13730048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 15238919 - 15239002
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  15238919 ttgcatattatatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgagctctagccactag 15239002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 19331491 - 19331457
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  19331491 ctccacaatttaattgtgtgagctctagccactag 19331457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 26801769 - 26801686
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactc--------cacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||        ||||||| ||||||||||||||||||||||||    
T  26801769 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttcttcacaattaaattgtgtgagctctagccactag 26801686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 27510297 - 27510214
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| || ||||||||||||||        ||||| ||||||||||||||||||||||||    
T  27510297 ttgcatattatatgcaggagccggggttcgatccccgtacactccatttctccacaattaaattgtgtgagctctagccactag 27510214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 29281333 - 29281295
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  29281333 ctccacaattaaattgtgtgagctctagccactagacta 29281295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 29617435 - 29617518
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  29617435 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 29617518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 31026249 - 31026332
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  31026249 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 31026332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 31077894 - 31077856
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  31077894 ctccacaattaaattgtgtgagctctagccactagacta 31077856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 46534788 - 46534701
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||| ||||| |||||||| |||||||||        |||| |||||||||||||||||||| |||||||    
T  46534788 ttgcatattatatgcaggagcctgagttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccattagacta 46534701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 48119549 - 48119583
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  48119549 ctccacaatttaattgtgtgagctctagccactag 48119583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 48719878 - 48719912
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  48719878 ctccacaatttaattgtgtgagctctagccactag 48719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 5804934 - 5804967
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    ||||||||||||||||||||||||||||||||||    
T  5804934 ctccacaatttaattgtgtgagctctagccacta 5804967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 11453673 - 11453632
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  11453673 ctccacaattaaattgtgtgagctctagccactaggctattt 11453632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 32047168 - 32047209
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  32047168 ctccacaattaaattgtgtgagctctagccactaggctattt 32047209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 32676982 - 32676900
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  32676982 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 32676900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 9697879 - 9697848
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||||||||||||||    
T  9697879 cacaatttaattgtgtgagctctagccactag 9697848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 98
Target Start/End: Original strand, 36622253 - 36622284
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccact 98  Q
    ||||||||||||||||||||||||||||||||    
T  36622253 tccacaatttaattgtgtgagctctagccact 36622284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 38151429 - 38151460
Alignment:
Q  73 atttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||||    
T  38151429 atttaattgtgtgagctctagccactagacta 38151460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 48269377 - 48269342
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactaga 101  Q
    |||||||||| |||||||||||||||||||||||||    
T  48269377 ctccacaattaaattgtgtgagctctagccactaga 48269342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 2229054 - 2229092
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  2229054 ctccacaattaaattgtgtgagctctagccattagacta 2229092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 3062853 - 3062887
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  3062853 ctccacaattaaattgtgtgagctctagccactag 3062887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 3532661 - 3532695
Alignment:
Q  70 acaatttaattgtgtgagctctagccactagacta 104  Q
    |||||| ||||||||||||||||||||||||||||    
T  3532661 acaattaaattgtgtgagctctagccactagacta 3532695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 3766841 - 3766887
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  3766841 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 3766887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 4960863 - 4960897
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  4960863 ctccacaattaaattgtgtgagctctagccactag 4960897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 5990137 - 5990099
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  5990137 ctccacaatttaattgtgtgagctttagccactaaacta 5990099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7525523 - 7525557
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  7525523 ctccacaattaaattgtgtgagctctagccactag 7525557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7691950 - 7691984
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||| ||||||    
T  7691950 ctccacaatttaattgtgtgagctctagtcactag 7691984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 8174195 - 8174229
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  8174195 ctccacaattaaattgtgtgagctctagccactag 8174229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 12615830 - 12615868
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  12615830 ctccacaattaaattgtgtgagctctaaccactagacta 12615868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 12640580 - 12640546
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  12640580 ctccacaattaaattgtgtgagctctagccactag 12640546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 15074894 - 15074856
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  15074894 ctccacaattaaattatgtgagctctagccactagacta 15074856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 15694631 - 15694669
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  15694631 cacaatttaattgtgtggactctagccactagactattt 15694669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 15701611 - 15701649
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  15701611 cacaatttaattgtgtggactctagccactagactattt 15701649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 107
Target Start/End: Complemental strand, 16861349 - 16861319
Alignment:
Q  77 aattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||||||||||||||||||||    
T  16861349 aattgtgtgagctctagccactagactattt 16861319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 19752959 - 19752925
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  19752959 ctccacaatttaattgtgtgagttctagccactag 19752925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 21762883 - 21762849
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  21762883 ctccacaattaaattgtgtgagctctagccactag 21762849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 24508905 - 24508939
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  24508905 ctccacaattaaattgtgtgagctctagccactag 24508939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 24692505 - 24692551
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    ||||||||| |||| ||||| |||||||||||||||| |||||||||    
T  24692505 ttgcatattctatgcaggagtcggagtttgaaccccggacactccac 24692551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 24732542 - 24732504
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  24732542 ctccacaattaaattgtgtgagctctagccattagacta 24732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 24781109 - 24781143
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  24781109 ctccacaattaaattgtgtgagctctagccactag 24781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 25318576 - 25318530
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||| ||||||||||||||||| ||| |||||||| |||||||||    
T  25318576 ttgcattttatatgtaggagccggggttcgaaccccgaacactccac 25318530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 25833634 - 25833668
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  25833634 ctccacaatttaattgtgtaagctctagccactag 25833668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 28547772 - 28547738
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  28547772 ctccacaattaaattgtgtgagctctagccactag 28547738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 30388498 - 30388464
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  30388498 ctccacaattaaattgtgtgagctctagccactag 30388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 30940850 - 30940888
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  30940850 ctccacaatttaattgtttgaactctagccactagacta 30940888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 32856908 - 32856874
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||| |||||||||||||||||||    
T  32856908 ctccacaatttaattatgtgagctctagccactag 32856874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 35645678 - 35645712
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  35645678 ctccacaattaaattgtgtgagctctagccactag 35645712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 35950207 - 35950241
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  35950207 ctccacaattaaattgtgtgagctctagccactag 35950241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 37300139 - 37300105
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccc 59  Q
    |||||||||||||||||| ||||||||||||||||    
T  37300139 ttgcatattatatgtaggggccggagtttgaaccc 37300105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 38889484 - 38889450
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||||||||| |||||||    
T  38889484 ctccacaatttaattgtgtgagctctatccactag 38889450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 42182189 - 42182151
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  42182189 ctccacaatttaattgtatgagctctagtcactagacta 42182151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 43119423 - 43119389
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  43119423 ctccacaattaaattgtgtgagctctagccactag 43119389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 43633081 - 43633047
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  43633081 ctccacaattaaattgtgtgagctctagccactag 43633047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 44616681 - 44616719
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  44616681 ctccacaattaaattgtgtgagctctaaccactagacta 44616719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 7836921 - 7836888
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||||||||||||||||||||| |||||    
T  7836921 atttaattgtgtgagctctagccactaggctatt 7836888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 32826564 - 32826523
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||| ||| ||||||    
T  32826564 ctccacaattaaattgtgtgagctctagccattaggctattt 32826523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 45284804 - 45284771
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||||||||||||| |||||||||||||    
T  45284804 atttaattgtgtgagctctaaccactagactatt 45284771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 2527340 - 2527380
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  2527340 ctccacaattaaattgtgtgagctctaaccactaggctatt 2527380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 35815917 - 35815957
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||| |||||||||||||||||||| ||| |||||    
T  35815917 ctccacaattaaattgtgtgagctctagccattaggctatt 35815957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 36391895 - 36391863
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||| ||||||||||||||||||||||    
T  36391895 ctccacaattaaattgtgtgagctctagccact 36391863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 49089588 - 49089616
Alignment:
Q  76 taattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||    
T  49089588 taattgtgtgagctctagccactagacta 49089616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 9661580 - 9661655
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||    
T  9661580 ttgcatattatatgtaagagtcggagttcgaaccccggacactccacaattaaattgtatgagctctagccactag 9661655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 14944493 - 14944569
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactaga 101  Q
    |||||||||||||  |||||  |  |||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  14944493 ttgcatattatatacaggagttgaggtttgaaccctggacactccacaatttaattgtgtgagttctagccactaga 14944569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 44602515 - 44602590
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||| ||||||| ||| ||||| ||| |||||||   ||||||||||||||||||||||||||||| |||||||    
T  44602515 ttgcattttatatgcaggggccggggttcgaaccccagccactccacaatttaattgtgtgagctctacccactag 44602590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 47934063 - 47934025
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47934063 ctccacaatttaattgtgtgagctctagccactagacta 47934025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 3763999 - 3763961
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  3763999 ctccacaatttaattgtgtgagctctagccactaaacta 3763961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 4700929 - 4700895
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  4700929 ctccacaatttaattgtgtgagctctagccactag 4700895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 6371144 - 6371227
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactc--------cacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||        ||||||| ||||||||||||||||||||||||    
T  6371144 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttcttcacaattaaattgtgtgagctctagccactag 6371227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 10417212 - 10417174
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  10417212 ctccacaattaaattgtgtgagctctagccactagacta 10417174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 12582068 - 12581985
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  12582068 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 12581985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 16342026 - 16342064
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16342026 ctccacaatttaattgtgtgagctctaaccactagacta 16342064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 22788665 - 22788627
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22788665 ctccacaatttaattgtgtgagcactagccactagacta 22788627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 31852604 - 31852570
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  31852604 ctccacaatttaattgtgtgagctctagccactag 31852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 37935940 - 37935974
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  37935940 ctccacaatttaattgtgtgagctctagccactag 37935974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 39696329 - 39696291
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  39696329 ctccacaattaaattgtgtgagctctagccactagacta 39696291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 43147424 - 43147341
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  43147424 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 43147341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 43596925 - 43597008
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  43596925 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 43597008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 46775070 - 46774987
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  46775070 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 46774987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 48569167 - 48569133
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  48569167 ctccacaatttaattgtgtgagctctagccactag 48569133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 49447151 - 49447234
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||| |||||| | |||        |||||||||||||||||||| ||||||||||||||    
T  49447151 ttgcatattatatgtaggagccggggttcgaaccctggacactccacttctccacaatttaattgtgtgggctctagccactag 49447234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 52731479 - 52731396
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacact--------ccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||        |||||||| ||||||||||||||||||||||||    
T  52731479 ttgcatattatatgcaggagccggggttcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccactag 52731396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 55021633 - 55021671
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  55021633 ctccacaattaaattgtgtgagctctagccactagacta 55021671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 12504634 - 12504593
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  12504634 ctccacaattaaattgtgtgagctctagccattagactattt 12504593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 13264262 - 13264227
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||| ||||||||||||||||||||||||||||    
T  13264262 cacaattaaattgtgtgagctctagccactagacta 13264227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 13564256 - 13564225
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||||||||||||||    
T  13564256 cacaatttaattgtgtgagctctagccactag 13564225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 42664066 - 42664097
Alignment:
Q  73 atttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||||    
T  42664066 atttaattgtgtgagctctagccactagacta 42664097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 104
Target Start/End: Complemental strand, 51759644 - 51759613
Alignment:
Q  73 atttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||||    
T  51759644 atttaattgtgtgagctctagccactagacta 51759613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 55251391 - 55251311
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccac 97  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||    
T  55251391 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccac 55251311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 637129 - 637175
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  637129 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 637175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 1458058 - 1458012
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  1458058 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 1458012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 2222618 - 2222652
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  2222618 ctccacaattaaattgtgtgagctctagccactag 2222652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 3036046 - 3036012
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  3036046 ctccacaattaaattgtgtgagctctagccactag 3036012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 4234325 - 4234238
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| ||| ||||| || |||||||||        |||| |||||||||||||||||||| |||||||    
T  4234325 ttgcatattatatgcaggagccggggttcgaacctcggacactccacttttccacaattaaattgtgtgagctctagccattagacta 4234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 4590325 - 4590359
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||||||||||    
T  4590325 ctccacaatttaattgtgtgagctttagccactag 4590359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 5179922 - 5179876
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  5179922 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 5179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 5305001 - 5304967
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  5305001 ctccacaattaaattgtgtgagctctagccactag 5304967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 8564250 - 8564288
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  8564250 ctccacattttaattgtgtgagctctagccactggacta 8564288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 9761194 - 9761232
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  9761194 ctccacaattaaattgtgtgagctctaaccactagacta 9761232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 10141062 - 10141096
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10141062 ctccacaattaaattgtgtgagctctagccactag 10141096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 10402520 - 10402554
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10402520 ctccacaattaaattgtgtgagctctagccactag 10402554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 10407020 - 10406986
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10407020 ctccacaattaaattgtgtgagctctagccactag 10406986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 12267597 - 12267635
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  12267597 ctccacaatataattgtgtgagctctaaccactagacta 12267635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 15208601 - 15208639
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  15208601 ctccacaattaaattgtgtgagctctagccaatagacta 15208639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 21935556 - 21935594
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  21935556 ctccacaattaaattgtgtgagctttagccactagacta 21935594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 22230474 - 22230428
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  22230474 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 22230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 29771290 - 29771252
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  29771290 ctccacaatttaattgtttgagctctagccactaaacta 29771252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 33325508 - 33325546
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  33325508 ctccacaattaaattgtgtgagctctagccactaaacta 33325546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 35948174 - 35948140
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  35948174 ctccacaattaaattgtgtgagctctagccactag 35948140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 37251192 - 37251230
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  37251192 ctccacaattaaattgtgtgaactctagccactagacta 37251230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 40051701 - 40051735
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  40051701 ctccacaattaaattgtgtgagctctagccactag 40051735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 40994094 - 40994060
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  40994094 ctccacaattaaattgtgtgagctctagccactag 40994060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 41854212 - 41854250
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  41854212 ctccacaattaaattgtgtgagctccagccactagacta 41854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 42218829 - 42218863
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||||||||||    
T  42218829 ctccacaatttaattgtgtgagctttagccactag 42218863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 42231542 - 42231588
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  42231542 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 42231588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 42395306 - 42395344
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  42395306 ctccacaattaaattgtgtgagctttagccactagacta 42395344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 45112151 - 45112105
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  45112151 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 45112105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 45126211 - 45126245
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||||||||||    
T  45126211 ctccacaatttaattgtgtgagctttagccactag 45126245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 45849126 - 45849160
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  45849126 ctccacaatttaattgtgtgagttctagccactag 45849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 46105565 - 46105611
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  46105565 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 46105611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 46582713 - 46582751
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  46582713 ctccacaatttaattgtgtgagttctggccactagacta 46582751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 46998359 - 46998321
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  46998359 ctccacaattaaattgtgtgagctctagccattagacta 46998321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 48744286 - 48744320
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  48744286 ctccacaatttaattgtgtgagttctagccactag 48744320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 48825810 - 48825772
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  48825810 ctccacaattaaattgtgtgagctctaaccactagacta 48825772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Original strand, 48949708 - 48949738
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagcca 96  Q
    |||||||||||||||||||||||||||||||    
T  48949708 ctccacaatttaattgtgtgagctctagcca 48949738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 48950863 - 48950897
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  48950863 ctccacaattaaattgtgtgagctctagccactag 48950897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 49056805 - 49056851
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||||||| |||||||| |||| ||||    
T  49056805 ttgcatattatatgcaggagccggagttcgaaccccggacaccccac 49056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 49757275 - 49757241
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  49757275 ctccacaattaaattgtgtgagctctagccactag 49757241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 49901561 - 49901595
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  49901561 ctccacaattaaattgtgtgagctctagccactag 49901595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 52798356 - 52798394
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||| || |||||||    
T  52798356 ctccacaatttaattgtgtgagctctagtcattagacta 52798394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 53634242 - 53634208
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  53634242 ctccacaattaaattgtgtgagctctagccactag 53634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 55536458 - 55536492
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  55536458 ctccacaattaaattgtgtgagctctagccactag 55536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 56087945 - 56087907
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  56087945 ctccacaattaaattgtgtgagttctagccactagacta 56087907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 194667 - 194630
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  194667 tccacaatttaattgtgtgagttctagccactatacta 194630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 8433614 - 8433581
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  8433614 ctccacaattaaattgtgtgagctctagccacta 8433581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 25726300 - 25726259
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||||||| |||||||| ||||||| ||||||    
T  25726300 ctccacaatttaattgtgcgagctctaaccactaggctattt 25726259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 30217678 - 30217719
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| ||||||||||||| |||||||||| ||||||    
T  30217678 ctccacaattaaattgtgtgagctttagccactaggctattt 30217719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 31016414 - 31016447
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  31016414 ctccacaattgaattgtgtgagctctagccacta 31016447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 37868558 - 37868517
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||| |||||| |||||||    
T  37868558 ctccacaattaaattgtgtgagctctaaccactaaactattt 37868517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 51890882 - 51890915
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||||||||||||||||||||| |||||    
T  51890882 atttaattgtgtgagctctagccactaggctatt 51890915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 17709494 - 17709454
Alignment:
Q  31 attatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||| ||||||||| |||||||| |||||||||    
T  17709494 attatatgtaggggccggagttcgaaccccggacactccac 17709454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 19963866 - 19963902
Alignment:
Q  71 caatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  19963866 caatttaattgtgtgagctctagccattaggctattt 19963902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 27103092 - 27103052
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||| ||||||||||||||||| |||||| |||||    
T  27103092 ctccacaattaaattgtgtgagctctagacactaggctatt 27103052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 94
Target Start/End: Complemental strand, 27434141 - 27434113
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagc 94  Q
    |||||||||||||||||||||||||||||    
T  27434141 ctccacaatttaattgtgtgagctctagc 27434113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 42916822 - 42916790
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    ||||||| |||||||||||||||||||||||||    
T  42916822 ctccacagtttaattgtgtgagctctagccact 42916790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 19612745 - 19612816
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagcca 96  Q
    ||||||||||||||||||||| || ||| |||||||  ||||||||||||||||||||||||||||||||||    
T  19612745 ttgcatattatatgtaggagctggggttcgaaccccagacactccacaatttaattgtgtgagctctagcca 19612816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 37063550 - 37063629
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||| ||| | ||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  37063550 ttgcatattatatgcaggggccagggttcgaactccggacactccacaatttaattgtgtgagctctagccactagacta 37063629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 40931166 - 40931247
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca-ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||||||||||  ||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||| |||||    
T  40931166 ttgcatattatatgtagggaccggagtttgaacccc--acttctccacaatttaattgtgtgagctctagccactagattattt 40931247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 38387693 - 38387768
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||| || || ||| |||||||  ||||||||||||||||||||||||||||||||||||||    
T  38387693 ttgcatattatatgcaggggctggggttcgaaccccagacactccacaatttaattgtgtgagctctagccactag 38387768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 41187338 - 41187376
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41187338 ctccacaatttaattgtgtgagctctagccactagacta 41187376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 3439027 - 3439068
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  3439027 ctccacaattaaattgtgtgagctctagccactagactattt 3439068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 37486924 - 37486883
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  37486924 ctccacaattaaattgtgtgagctctagccactagactattt 37486883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 9937530 - 9937486
Alignment:
Q  55 aaccccgtacactccacaatttaattgtgtgagctctagccacta 99  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  9937530 aaccccgaacactccacaatttaattgtgtgagctctaaccacta 9937486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 4562792 - 4562709
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  4562792 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 4562709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 16754762 - 16754800
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  16754762 ctccacaatttaattgtgagagctctagccactagacta 16754800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 20296448 - 20296531
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  20296448 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 20296531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 28153133 - 28153095
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  28153133 ctccacaattaaattgtgtgagctctagccactagacta 28153095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 29772269 - 29772235
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  29772269 ctccacaatttaattgtgtgagctctagccactag 29772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 30390409 - 30390326
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacac--------tccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||        |||||||||||||||||||||||||| |||||||    
T  30390409 ttgcatattatatgcaggagccggggttcgaaccccggacaccctacttctccacaatttaattgtgtgagctctaaccactag 30390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 41509546 - 41509629
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  41509546 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 41509629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 41566841 - 41566875
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  41566841 ctccacaatttaattgtgtgagctctagccactag 41566875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 2643727 - 2643809
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  2643727 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 2643809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 18278408 - 18278367
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  18278408 ctccacaattaaattgtgtgagctctagccactaggctattt 18278367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 22653635 - 22653594
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  22653635 ctccacaattaaattgtatgagctctagccactagactattt 22653594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 28194711 - 28194752
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  28194711 ctccacaattaaattgtgtgagctctagccactaggctattt 28194752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 3287096 - 3287010
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccaca-------atttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||| ||||| ||| |||||||| | |||||||        ||||||||||||||||||||||||||||||||    
T  3287096 ttgcatattatatgcaggggccggggttcgaaccccggatactccacttctccacatttaattgtgtgagctctagccactagacta 3287010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 34614058 - 34614098
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  34614058 ctccacaattaaattgtgtgagctctagccactaggctatt 34614098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 38179285 - 38179217
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctag 93  Q
    |||||| ||||||| ||| || || ||| ||||| || ||||||||||||| |||||||||||||||||    
T  38179285 ttgcattttatatgcaggggctggggttcgaacctcggacactccacaattaaattgtgtgagctctag 38179217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 8742812 - 8742777
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||| |||||||||||||||||    
T  8742812 cacaatttaattgtgtgaactctagccactagacta 8742777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 1260263 - 1260297
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  1260263 ctccacaattaaattgtgtgagctctagccactag 1260297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 1309117 - 1309083
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  1309117 ctccacaattaaattgtgtgagctctagccactag 1309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 1844896 - 1844930
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  1844896 ctccacaattaaattgtgtgagctctagccactag 1844930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 5613033 - 5613067
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||||||||| |||||||    
T  5613033 ctccacaatttaattgtgtgagctctaaccactag 5613067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 6331640 - 6331674
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  6331640 ctccacaattaaattgtgtgagctctagccactag 6331674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 16385033 - 16384999
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  16385033 ctccacaattaaattgtgtgagctctagccactag 16384999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 17499028 - 17499062
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17499028 ctccacaattaaattgtgtgagctctagccactag 17499062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 18694864 - 18694898
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  18694864 ctccacaattaaattgtgtgagctctagccactag 18694898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 28692476 - 28692446
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagcca 96  Q
    |||||||||||||||||||||||||||||||    
T  28692476 ctccacaatttaattgtgtgagctctagcca 28692446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 29449527 - 29449565
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  29449527 ctccacaattaaattgtgtgagctctagccattagacta 29449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 30849808 - 30849766
Alignment:
Q  29 atattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| |||||||||||||||||  |||||||||    
T  30849808 atattatatgtaggggccggagtttgaaccccaaacactccac 30849766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 30932437 - 30932399
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  30932437 ctccacaattaaattgtatgagctctagccactagacta 30932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 33228924 - 33228890
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  33228924 ctccacaattaaattgtgtgagctctagccactag 33228890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 38400393 - 38400427
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  38400393 ctccacaattaaattgtgtgagctctagccactag 38400427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 40473541 - 40473507
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  40473541 ctccacaattaaattgtgtgagctctagccactag 40473507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 40535440 - 40535406
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  40535440 ctccacaattaaattgtgtgagctctagccactag 40535406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 43895996 - 43896030
Alignment:
Q  70 acaatttaattgtgtgagctctagccactagacta 104  Q
    |||||| ||||||||||||||||||||||||||||    
T  43895996 acaattaaattgtgtgagctctagccactagacta 43896030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 44186522 - 44186560
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  44186522 ctccacaattaaattgtgtgagctctagccaccagacta 44186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 44948679 - 44948713
Alignment:
Q  70 acaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||| ||||||||||||||||    
T  44948679 acaatttaattgtgtgagttctagccactagacta 44948713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 5474986 - 5475019
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  5474986 ctccacaattcaattgtgtgagctctagccacta 5475019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 5521210 - 5521177
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||| ||||||||||||    
T  5521210 tccacaatttaattgtgtgagttctagccactag 5521177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 20972884 - 20972843
Alignment:
Q  30 tattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    ||||||||| ||||||||||||| |||||||| |||||||||    
T  20972884 tattatatgcaggagccggagttcgaaccccgaacactccac 20972843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 39408681 - 39408648
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  39408681 ctccacaattaaattgtgtgagctctagccacta 39408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 13975208 - 13975240
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactaga 101  Q
    ||||||| |||||||||||||||||||||||||    
T  13975208 cacaattaaattgtgtgagctctagccactaga 13975240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 94
Target Start/End: Original strand, 14215961 - 14215989
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagc 94  Q
    |||||||||||||||||||||||||||||    
T  14215961 ctccacaatttaattgtgtgagctctagc 14215989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 36072634 - 36072606
Alignment:
Q  29 atattatatgtaggagccggagtttgaac 57  Q
    |||||||||||||||||||||||||||||    
T  36072634 atattatatgtaggagccggagtttgaac 36072606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 46021919 - 46021844
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||| |||||||||||||||||    
T  46021919 ttgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtatgagctctagccactag 46021844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 3269649 - 3269724
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||| || || ||| |||||| | ||| ||||||||||||||||||||| ||||||||||||    
T  3269649 ttgcatattatatgcaggggctggggttcgaaccctggacagtccacaatttaattgtgtgagttctagccactag 3269724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 3560372 - 3560334
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3560372 ctccacaatttaattgtgtgagctctagccactagacta 3560334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 1570232 - 1570149
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  1570232 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 1570149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 4482638 - 4482555
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||||||| |||||||| | |||||||        |||| ||||||||||||||||||||||||    
T  4482638 ttgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccactag 4482555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 6438104 - 6438021
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  6438104 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 6438021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 7166218 - 7166184
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  7166218 ctccacaatttaattgtgtgagctctagccactag 7166184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 11215080 - 11215114
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  11215080 ctccacaatttaattgtgtgagctctagccactag 11215114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 15819641 - 15819558
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  15819641 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 15819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 18467189 - 18467155
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  18467189 ctccacaatttaattgtgtgagctctagccactag 18467155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 18534031 - 18534114
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||| ||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  18534031 ttgcatattatatgtaggagtcggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 18534114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 19011434 - 19011468
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  19011434 ctccacaatttaattgtgtgagctctagccactag 19011468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 22563465 - 22563499
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  22563465 ctccacaatttaattgtgtgagctctagccactag 22563499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 27642718 - 27642680
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  27642718 ctccacaattaaattgtgtgagctctagccactagacta 27642680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 29188715 - 29188753
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  29188715 ctccacaattaaattgtgtgagctctagccactagacta 29188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 45333703 - 45333669
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  45333703 ctccacaatttaattgtgtgagctctagccactag 45333669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 45517259 - 45517225
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  45517259 ctccacaatttaattgtgtgagctctagccactag 45517225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 46965770 - 46965853
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  46965770 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgtgtgagctctagccactag 46965853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 51050269 - 51050303
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  51050269 ctccacaatttaattgtgtgagctctagccactag 51050303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 1836571 - 1836612
Alignment:
Q  63 acactccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  1836571 acactccacaatttaattgtgtgagttttagccactagacta 1836612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 9866174 - 9866137
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9866174 tccacaattaaattgtgtgagctctagccactagacta 9866137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 16343058 - 16343140
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  16343058 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 16343140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 51942373 - 51942405
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||||||||||||||||||||||||||    
T  51942373 ctccacaatttaattgtgtgagctctagccact 51942405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 25999929 - 25999964
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactaga 101  Q
    |||||||||| |||||||||||||||||||||||||    
T  25999929 ctccacaattaaattgtgtgagctctagccactaga 25999964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 2277833 - 2277867
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  2277833 ctccacaattaaattgtgtgagctctagccactag 2277867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 2754439 - 2754477
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  2754439 ctccacaattaaattgtgtgagctctagccactaaacta 2754477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 3694907 - 3694869
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  3694907 ctccacaatttaattgtgcgagctctagccaccagacta 3694869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7191111 - 7191145
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  7191111 ctccacaattaaattgtgtgagctctagccactag 7191145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 8984497 - 8984463
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  8984497 ctccacaattaaattgtgtgagctctagccactag 8984463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 12048115 - 12048081
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  12048115 ctccacaattaaattgtgtgagctctagccactag 12048081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 12502245 - 12502211
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  12502245 ctccacaattaaattgtgtgagctctagccactag 12502211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 12650375 - 12650341
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  12650375 ctccacaattaaattgtgtgagctctagccactag 12650341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 13538437 - 13538399
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  13538437 ctccacaatttaattgtgtgagttctagccactatacta 13538399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 13773247 - 13773281
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  13773247 ctccacaattaaattgtgtgagctctagccactag 13773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 15390299 - 15390333
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  15390299 ctccacaatttaattgtgtgagttctagccactag 15390333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 16313697 - 16313659
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  16313697 ctccacaattaaattgtgggagctctagccactagacta 16313659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 16526217 - 16526171
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||| | ||| ||||||||||||||||||    
T  16526217 ttgcatattatatgcaggagcctgtgttcgaaccccgtacactccac 16526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 18551673 - 18551627
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||| ||||| |||||||||||| |||||||||    
T  18551673 ttgcatattatatgcaggggccggggtttgaaccccgaacactccac 18551627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 21265735 - 21265769
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  21265735 ctccacaattaaattgtgtgagctctagccactag 21265769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 27818647 - 27818681
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  27818647 ctccacaattaaattgtgtgagctctagccactag 27818681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 28564336 - 28564302
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  28564336 ctccacaattaaattgtgtgagctctagccactag 28564302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 32594330 - 32594364
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  32594330 ctccacaattaaattgtgtgagctctagccactag 32594364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 32970792 - 32970758
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  32970792 ctccacaattaaattgtgtgagctctagccactag 32970758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 33218880 - 33218842
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  33218880 ctccacaatttaattgtgtaagctctagtcactagacta 33218842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 33736853 - 33736883
Alignment:
Q  73 atttaattgtgtgagctctagccactagact 103  Q
    |||||||||||||||||||||||||||||||    
T  33736853 atttaattgtgtgagctctagccactagact 33736883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 35283580 - 35283618
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  35283580 ctccacaatttaattgtgtgagctctaaccactaaacta 35283618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 36726640 - 36726678
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  36726640 ctccacaattaaattgtgtgagctctaaccactagacta 36726678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 40519534 - 40519500
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  40519534 ctccacaattaaattgtgtgagctctagccactag 40519500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 42458194 - 42458160
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||| |||||||||||||    
T  42458194 ctccacaatttaattgtgtgaactctagccactag 42458160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 43884873 - 43884911
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  43884873 ctccacaattaaattgtgtgagttctagccactagacta 43884911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 44732712 - 44732750
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  44732712 ctccacaattaaattgtgtgaactctagccactagacta 44732750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 46225457 - 46225495
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  46225457 ctccacaattaaattgtgtgagctctagccattagacta 46225495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 50899550 - 50899504
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  50899550 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 50899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 52369676 - 52369714
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  52369676 ctccataattaaattgtgtgagctctagccactagacta 52369714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 26824276 - 26824309
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||||||||||||||||||||| |||||    
T  26824276 atttaattgtgtgagctctagccactaggctatt 26824309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 31124623 - 31124590
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||||||||||||||||||||| |||||    
T  31124623 atttaattgtgtgagctctagccactaggctatt 31124590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 34557308 - 34557275
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||| |||||||||||||||||||||||||||    
T  34557308 atttaaatgtgtgagctctagccactagactatt 34557275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 39346970 - 39346929
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| ||||||||||| |||||||||||| ||||||    
T  39346970 ctccacaattaaattgtgtgagttctagccactaggctattt 39346929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 47642973 - 47642940
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  47642973 ctccacaattaaattgtgtgagctctagccacta 47642940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 7961783 - 7961823
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||| |||||||||||||||| ||||||| ||||||    
T  7961783 tccacaattaaattgtgtgagctctaaccactaggctattt 7961823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 21401424 - 21401388
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagac 102  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  21401424 ctccacaattaaattgtgtgagctttagccactagac 21401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 34580777 - 34580737
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactatt 106  Q
    ||||||||||||||||| ||||||||| |||||||| ||||    
T  34580777 ctccacaatttaattgtatgagctctaaccactagattatt 34580737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 34656386 - 34656354
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||| ||||||||||||||||||||||    
T  34656386 ctccacaattaaattgtgtgagctctagccact 34656354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 48643704 - 48643736
Alignment:
Q  68 ccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||| ||||||||||||||||||||||||    
T  48643704 ccacaattaaattgtgtgagctctagccactag 48643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 50899488 - 50899460
Alignment:
Q  72 aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||    
T  50899488 aatttaattgtgtgagctctagccactag 50899460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 266737 - 266662
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| ||| |||  ||||||||||||| ||||||||||||||||||||||||    
T  266737 ttgcatattatatgcaggagccggggttcgaaacccagacactccacaattaaattgtgtgagctctagccactag 266662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 894672 - 894593
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||| | ||  ||| |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  894672 ttgcatattatatgcaggggtcgaggttcgaaccccggacactccacaatttaattgtgtgagctctagccactggacta 894593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 4408388 - 4408463
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||| || || ||| ||||| |  ||||||||||||||||||||||||||||| ||||||||    
T  4408388 ttgcatattatatgcaggggctggggttcgaaccacagacactccacaatttaattgtgtgagctctggccactag 4408463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 3640593 - 3640631
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3640593 ctccacaatttaattgtgtgagctctagccactagacta 3640631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 26347483 - 26347521
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26347483 ctccacaatttaattgtgtgagctctagccactagacta 26347521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 31802083 - 31802170
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||||||    
T  31802083 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagacta 31802170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 2426143 - 2426181
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  2426143 ctccacaatttaattgtgtgagctctagccaatagacta 2426181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 3012714 - 3012676
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  3012714 ctccacaatttaattgtgtgagctctagccattagacta 3012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 3795765 - 3795731
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  3795765 ctccacaatttaattgtgtgagctctagccactag 3795731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 7207874 - 7207957
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||        ||||| ||||||||||||||||||||||||    
T  7207874 ttgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactag 7207957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7425445 - 7425479
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  7425445 ctccacaatttaattgtgtgagctctagccactag 7425479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 7545408 - 7545446
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  7545408 ctccacaattaaattgtgtgagctctagccactagacta 7545446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 12284200 - 12284238
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12284200 ctccacaattaaattgtgtgagctctagccactagacta 12284238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 17441879 - 17441796
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  17441879 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 17441796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 19953868 - 19953785
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  19953868 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 19953785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 22997415 - 22997453
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  22997415 ctccacaattaaattgtgtgagctctagccactagacta 22997453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 23790986 - 23790948
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  23790986 ctccacaattaaattgtgtgagctctagccactagacta 23790948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 27218914 - 27218997
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||||||  || |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  27218914 ttgcatattatatgtaggagccgggattcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 27218997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 31803586 - 31803548
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  31803586 ctccacaattaaattgtgtgagctctagccactagacta 31803548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 32166448 - 32166482
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  32166448 ctccacaatttaattgtgtgagctctagccactag 32166482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 32611594 - 32611511
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  32611594 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 32611511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 8857123 - 8857196
Alignment:
Q  28 catattatatgtaggagccggagtttgaaccccgtaca-ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||| ||| ||||| ||| |||||||  ||  |||||||||| ||||||||||||||||||||||||    
T  8857123 catattatatgcaggggccggggttcgaaccccccacttctccacaattaaattgtgtgagctctagccactag 8857196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 9435705 - 9435746
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  9435705 ctccacaatttaattgtgtgagctctagccattaggctattt 9435746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 100
Target Start/End: Original strand, 20729033 - 20729064
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||||||||||||||    
T  20729033 cacaatttaattgtgtgagctctagccactag 20729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 743642 - 743680
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  743642 ctccacaattaaattgtgcgagctctagccactagacta 743680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 2816969 - 2817003
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  2816969 ctccacaattaaattgtgtgagctctagccactag 2817003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 3794164 - 3794130
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  3794164 ctccacaattaaattgtgtgagctctagccactag 3794130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 5052065 - 5052031
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  5052065 ctccacaattaaattgtgtgagctctagccactag 5052031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 7328638 - 7328604
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  7328638 ctccacaattaaattgtgtgagctctagccactag 7328604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7414403 - 7414437
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||||||||||    
T  7414403 ctccacaatttaattgtgtgagctatagccactag 7414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7581123 - 7581157
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  7581123 ctccacaattaaattgtgtgagctctagccactag 7581157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 9704495 - 9704529
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  9704495 ctccacaattaaattgtgtgagctctagccactag 9704529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 10517278 - 10517312
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10517278 ctccacaattaaattgtgtgagctctagccactag 10517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 10934629 - 10934675
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  10934629 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 10934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 13116615 - 13116581
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  13116615 ctccacaattaaattgtgtgagctctagccactag 13116581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 15963934 - 15963900
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  15963934 ctccacaatttaattgtgtgagttctagccactag 15963900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 18071615 - 18071653
Alignment:
Q  69 cacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  18071615 cacaattaaattgtgtgagctctagccattagactattt 18071653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 19892267 - 19892233
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||| ||||||||||||||||    
T  19892267 ctccacaatttaattgtgagagctctagccactag 19892233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 20584152 - 20584190
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  20584152 ctccacaattaaattgtgtgagctctagccattagacta 20584190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 22574949 - 22574987
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  22574949 ctccacaattaaattgtgtgagctctaaccactagacta 22574987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 28148724 - 28148690
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  28148724 ctccacaattaaattgtgtgagctctagccactag 28148690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 30885561 - 30885527
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||| |||||||||||||    
T  30885561 ctccacaatttaattgtgtgaactctagccactag 30885527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 33573896 - 33573930
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  33573896 ctccacaattaaattgtgtgagctctagccactag 33573930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 33646914 - 33646948
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  33646914 ctccacaattaaattgtgtgagctctagccactag 33646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 7865346 - 7865313
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||||||||||| |||||||||||    
T  7865346 ctccacaatttaattgtgtgagttctagccacta 7865313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 10913070 - 10913037
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    ||||| ||||||||||||||||||||||||||||    
T  10913070 ctccataatttaattgtgtgagctctagccacta 10913037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 13158700 - 13158667
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  13158700 ctccacaattaaattgtgtgagctctagccacta 13158667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 13163556 - 13163523
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  13163556 ctccacaattaaattgtgtgagctctagccacta 13163523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 24618489 - 24618452
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  24618489 tccacaattaaattgtgtgagttctagccactagacta 24618452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 28842734 - 28842767
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||| ||||||||||||||||||||||||    
T  28842734 tccacaattaaattgtgtgagctctagccactag 28842767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 30916400 - 30916437
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagact 103  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  30916400 ctccacaattaaattgtgtgagctctagccattagact 30916437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 2500505 - 2500465
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||| ||||||||||||||||| |||||| |||||    
T  2500505 ctccacaattaaattgtgtgagctctagacactaggctatt 2500465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 7418357 - 7418389
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    ||||| |||||||||||||||||||||||||||    
T  7418357 ctccataatttaattgtgtgagctctagccact 7418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 39169799 - 39169870
Alignment:
Q  33 tatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||| ||| ||||| ||| |||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  39169799 tatatgcaggggccggggttcgaaccccgaacactccacaatttaattgtgtgagctctaaccactatacta 39169870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 45871051 - 45871126
Alignment:
Q  29 atattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||| | ||| ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||    
T  45871051 atattatatgcaggggtcggggttcgaaccccggacactctacaatttaattgtgtgagttctagccactaaacta 45871126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 6447089 - 6447135
Alignment:
Q  54 gaaccccgtacactccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  6447089 gaaccccggacactccacaatttaattgtgtgaggtctagccactag 6447135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 21405193 - 21405274
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||| | |||||||||||| || ||| ||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  21405193 ttgcatttaatatgtaggagctggggttcgaatcccg-acactccacaattaaattatgtgagctctaaccactagactattt 21405274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 38819315 - 38819277
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38819315 ctccacaatttaattgtgtgagctctagccactagacta 38819277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 3748593 - 3748559
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  3748593 ctccacaatttaattgtgtgagctctagccactag 3748559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 3894623 - 3894661
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  3894623 ctccacaattaaattgtgtgagctctagccactagacta 3894661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 4139030 - 4139113
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  4139030 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 4139113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 6488203 - 6488237
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  6488203 ctccacaatttaattgtgtgagctctagccactag 6488237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 6920003 - 6919920
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  6920003 ttgcatattatatgcaggagccggggttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccactag 6919920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 11820083 - 11820121
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11820083 ctccacaattaaattgtgtgagctctagccactagacta 11820121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 17218567 - 17218601
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  17218567 ctccacaatttaattgtgtgagctctagccactag 17218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 17729070 - 17729108
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  17729070 ctccacaattaaattgtgtgagctctagccactagacta 17729108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 18194368 - 18194451
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  18194368 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 18194451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 19030299 - 19030337
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  19030299 ctccacaattaaattgtgtgagctctagccactagacta 19030337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 19591619 - 19591573
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||    
T  19591619 ttgcatattatatgtaggagccggggttcgaaccccggacactccac 19591573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 22501922 - 22501888
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  22501922 ctccacaatttaattgtgtgagctctagccactag 22501888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 24430228 - 24430266
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  24430228 ctccacaattaaattgtgtgagctctagccactagacta 24430266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 32144614 - 32144697
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacac--------tccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||        ||||||||| ||||||||||||||||||||||||    
T  32144614 ttgcatattatatgcaggagccggggttcgaaccccggacaccccatttctccacaattaaattgtgtgagctctagccactag 32144697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 33606931 - 33606897
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  33606931 ctccacaatttaattgtgtgagctctagccactag 33606897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 34757595 - 34757629
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  34757595 ctccacaatttaattgtgtgagctctagccactag 34757629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 37800651 - 37800568
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  37800651 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 37800568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 40548333 - 40548416
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||        ||||| ||||||||||||||||||||||||    
T  40548333 ttgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactag 40548416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 40933871 - 40933788
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  40933871 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 40933788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 40963702 - 40963664
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  40963702 ctccacaatttaattgtgtgagctctagcctctagacta 40963664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 50234154 - 50234237
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  50234154 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 50234237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 50496854 - 50496771
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  50496854 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 50496771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 52410232 - 52410194
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  52410232 ctccacaattaaattgtgtgagctctagccactagacta 52410194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 54626421 - 54626459
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  54626421 ctccacaattaaattgtgtgagctctagccactagacta 54626459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 9220244 - 9220203
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  9220244 ctccacaattaaattgtgtgagctctagccactaaactattt 9220203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 10176943 - 10176861
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  10176943 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 10176861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 31327758 - 31327676
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  31327758 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 31327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 49194683 - 49194650
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    ||||||||||||||||||||||||||||||||||    
T  49194683 ctccacaatttaattgtgtgagctctagccacta 49194650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 51467266 - 51467307
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  51467266 ctccacaattaaattgtgtgagctctagccactaggctattt 51467307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 15492171 - 15492211
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  15492171 tccacaattaaattgtgtgagctctagccactaggctattt 15492211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 49728728 - 49728796
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctag 93  Q
    |||||| ||||||| | ||||| | ||| ||| |||| ||||||||||||| |||||||||||||||||    
T  49728728 ttgcattttatatgcaagagccagggttcgaatcccggacactccacaattaaattgtgtgagctctag 49728796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 52974093 - 52974012
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||    
T  52974093 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccact 52974012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 20489845 - 20489924
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||| ||||||||| |||||||| |||| | || | |  |||||||||| ||||||||||| ||||    
T  20489845 ttgcatattatatgcaggggccggagttcgaaccccggacacccaactactccattgtgtgagttctagccactaaacta 20489924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 34898758 - 34898723
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactaga 101  Q
    |||||||||| |||||||||||||||||||||||||    
T  34898758 ctccacaattaaattgtgtgagctctagccactaga 34898723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 2007123 - 2007077
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||| ||| |||||||||||| |||||||||    
T  2007123 ttgcatattatatgcaggagtcggggtttgaaccccggacactccac 2007077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 2523005 - 2523039
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  2523005 ctccacaattaaattgtgtgagctctagccactag 2523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 4541976 - 4542010
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||||| |||||||||||||    
T  4541976 ctccacaatttaattgtgtgaactctagccactag 4542010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 4860240 - 4860278
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  4860240 ctccacaattaaattgtgtgagctctaaccactagacta 4860278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 4880248 - 4880286
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  4880248 ctccacaattaaattgtgtgagctctaaccactagacta 4880286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7270034 - 7270068
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  7270034 ctccacaattaaattgtgtgagctctagccactag 7270068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7920399 - 7920433
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  7920399 ctccacaattaaattgtgtgagctctagccactag 7920433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 8964767 - 8964733
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  8964767 ctccacaattaaattgtgtgagctctagccactag 8964733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 10482844 - 10482810
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10482844 ctccacaattaaattgtgtgagctctagccactag 10482810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 13638236 - 13638202
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||| ||||||||||    
T  13638236 ctccacaatttaattgtgtgagctatagccactag 13638202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 14887309 - 14887343
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||| |||||||||||||||||    
T  14887309 ctccacaatttaattgtatgagctctagccactag 14887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 15299155 - 15299185
Alignment:
Q  70 acaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||    
T  15299155 acaatttaattgtgtgagctctagccactag 15299185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 17608310 - 17608276
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  17608310 ctccacaatttaattgtgtgagttctagccactag 17608276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 23164144 - 23164106
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  23164144 ctccacaattaaattgtgtgagctctagccactaaacta 23164106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 27669000 - 27669034
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  27669000 ctccacaattaaattgtgtgagctctagccactag 27669034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 28550304 - 28550270
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  28550304 ctccacaattaaattgtgtgagctctagccactag 28550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 28689663 - 28689629
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||| ||||||||    
T  28689663 ctccacaatttaattgtgtgagctctggccactag 28689629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 30555218 - 30555184
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  30555218 ctccacaattaaattgtgtgagctctagccactag 30555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 30779558 - 30779524
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  30779558 ctccacaatttaattgtgtgagttctagccactag 30779524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 31316713 - 31316751
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  31316713 ctccacaattaaattgggtgagctctagccactagacta 31316751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 31327492 - 31327458
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  31327492 ctccacaattaaattgtgtgagctctagccactag 31327458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 32256545 - 32256507
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  32256545 ctccacaattaaattgtgtgagctctagccactaaacta 32256507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 33706718 - 33706684
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  33706718 ctccacaattaaattgtgtgagctctagccactag 33706684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 34579449 - 34579411
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  34579449 ctccacaattaaattgtgtgaactctagccactagacta 34579411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 37488451 - 37488417
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  37488451 ctccacaattaaattgtgtgagctctagccactag 37488417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 39720014 - 39720048
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  39720014 ctccacaattaaattgtgtgagctctagccactag 39720048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 39966065 - 39966035
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagcca 96  Q
    |||||||||||||||||||||||||||||||    
T  39966065 ctccacaatttaattgtgtgagctctagcca 39966035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 41936398 - 41936364
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  41936398 ctccacaattaaattgtgtgagctctagccactag 41936364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 44764561 - 44764527
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||| |||||||||||||||||||||||||||||    
T  44764561 ctccataatttaattgtgtgagctctagccactag 44764527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 45198802 - 45198836
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  45198802 ctccacaattaaattgtgtgagctctagccactag 45198836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 45512986 - 45512948
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  45512986 ctccacaattaaattgtgtgagctctaaccactagacta 45512948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 45551800 - 45551766
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  45551800 ctccacaattaaattgtgtgagctctagccactag 45551766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 45701423 - 45701457
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  45701423 ctccacaattaaattgtgtgagctctagccactag 45701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 48251651 - 48251685
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  48251651 ctccacaattaaattgtgtgagctctagccactag 48251685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 48739735 - 48739697
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||| || |||||||||||||||||||||||||    
T  48739735 ctccacaattaaactgtgtgagctctagccactagacta 48739697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 107
Target Start/End: Complemental strand, 48887381 - 48887351
Alignment:
Q  77 aattgtgtgagctctagccactagactattt 107  Q
    |||||||||||||||||||||||||||||||    
T  48887381 aattgtgtgagctctagccactagactattt 48887351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 49447168 - 49447214
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  49447168 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 49447214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 50675733 - 50675699
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  50675733 ctccacaattaaattgtgtgagctctagccactag 50675699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 53432728 - 53432694
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  53432728 ctccacaattaaattgtgtgagctctagccactag 53432694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 53578034 - 53578068
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  53578034 ctccacaattaaattgtgtgagctctagccactag 53578068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 53752691 - 53752657
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||| ||||||||||||    
T  53752691 ctccacaatttaattgtgtgagttctagccactag 53752657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 55008014 - 55007980
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  55008014 ctccacaattaaattgtgtgagctctagccactag 55007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 16906810 - 16906777
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  16906810 ctccacaattaaattgtgtgagctctagccacta 16906777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 24303475 - 24303508
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||||||||||||||||||||| |||||    
T  24303475 atttaattgtgtgagctctagccactaggctatt 24303508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 25279050 - 25279009
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||||| || |||||    
T  25279050 ctccacaattaaattgtgtgagctctagccactcgattattt 25279009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 31528949 - 31528908
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||| ||||||||||||||||| ||||||    
T  31528949 ctccacaattaaattgtatgagctctagccactaggctattt 31528908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 33225339 - 33225306
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  33225339 ctccacaattaaattgtgtgagctctagccacta 33225306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 40910171 - 40910130
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||  ||||||||||||||||||||||| ||||||    
T  40910171 ctccacaattatattgtgtgagctctagccactaggctattt 40910130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 44764805 - 44764838
Alignment:
Q  73 atttaattgtgtgagctctagccactagactatt 106  Q
    |||||||||||||||||||||||||||| |||||    
T  44764805 atttaattgtgtgagctctagccactaggctatt 44764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 44827199 - 44827236
Alignment:
Q  70 acaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  44827199 acaattaaattgtgtgagctctagcaactagactattt 44827236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 47098811 - 47098844
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  47098811 ctccacaattaaattgtgtgagctctagccacta 47098844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 53347281 - 53347248
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||||||||||||||||||| |||||||    
T  53347281 ctccacaatttaattgtgtgagctctggccacta 53347248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 53906459 - 53906492
Alignment:
Q  67 tccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||| ||||||||||||||||||||||||    
T  53906459 tccacaattaaattgtgtgagctctagccactag 53906492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 17472321 - 17472289
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||| ||||||||||||||||||||||    
T  17472321 ctccacaattaaattgtgtgagctctagccact 17472289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 19866550 - 19866582
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccact 98  Q
    |||||||||| ||||||||||||||||||||||    
T  19866550 ctccacaattaaattgtgtgagctctagccact 19866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 27739805 - 27739841
Alignment:
Q  30 tattatatgtaggagccggagtttgaaccccgtacac 66  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  27739805 tattatatgtaggggccggagtttgaaccccggacac 27739841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 12024 - 12111
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| |||||||||||| |||        |||||||||| |||||||||| |||||||||||||||||    
T  12024 ttgcatattatatgcaggagccggggtttgaaccccggacactccacttctccacaattaaattgtgtgaactctagccactagacta 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 59813 - 59900
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||||||    
T  59813 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagacta 59900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 8996 - 9079
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||| ||||||||||||| |||||||| | |        |||||||||| ||||||||||||||||||||||||    
T  8996 ttgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccactag 9079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 4005 - 3971
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  4005 ctccacaatttaattgtgtgagctctagccactag 3971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 50835 - 50797
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  50835 ctccacaatttaattgtgtgagctctaaccactagacta 50797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 1339 - 1380
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  1339 ctccacaatttaattatgtgagctctagccactaggctattt 1380  T

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Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 15843 - 15884
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  15843 ctccacaattaaattgtgtgagctctagccattagactattt 15884  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 93973 - 93932
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagactattt 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  93973 ctccacaattaaattgtatgagctctagccactagactattt 93932  T

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Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 49992 - 49954
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  49992 ctccacaatttaattgtgtgagctctaactactagacta 49954  T

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Target: scaffold1185 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 2384 - 2350
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  2384 ctccacaattaaattgtgtgagctctagccactag 2350  T

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Target: scaffold0690 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 3745 - 3779
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  3745 ctccacaattaaattgtgtgagctctagccactag 3779  T

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Target: scaffold0460 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 12538 - 12572
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  12538 ctccacaattaaattgtgtgagctctagccactag 12572  T

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Target: scaffold0366 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 900 - 854
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  900 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 854  T

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Target: scaffold0330 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 6847 - 6885
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  6847 ctccacaatttaactgtgtgagctctagccactacacta 6885  T

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Target: scaffold0187 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 11160 - 11114
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  11160 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 11114  T

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Target: scaffold0187; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 21488 - 21442
Alignment:
Q  25 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 71  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  21488 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 21442  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 17699 - 17733
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17699 ctccacaattaaattgtgtgagctctagccactag 17733  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 10817 - 10783
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  10817 ctccacaattaaattgtgtgagctctagccactag 10783  T

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Target: scaffold0068 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 45989 - 46027
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactagacta 104  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  45989 ctccacaatttaattgtgtgagttctagccactaaacta 46027  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 112187 - 112221
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  112187 ctccacaattaaattgtgtgagctctagccactag 112221  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 12252 - 12218
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  12252 ctccacaattaaattgtgtgagctctagccactag 12218  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 8816 - 8782
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccactag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  8816 ctccacaatttaattgtgtcagctctagccactag 8782  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 1341 - 1374
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  1341 ctccacaattaaattgtgtgagctctagccacta 1374  T

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Target: scaffold0254 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 1396 - 1429
Alignment:
Q  66 ctccacaatttaattgtgtgagctctagccacta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  1396 ctccacaattaaattgtgtgagctctagccacta 1429  T

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