View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13450_low_1 (Length: 545)
Name: NF13450_low_1
Description: NF13450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13450_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 440; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 12 - 526
Target Start/End: Complemental strand, 31944222 - 31943708
Alignment:
| Q |
12 |
agacttaatctcggtatattagttcattagtctcatggcttatttttagcatgagccaaagcttttaaaaatcaacaatatgttatgtttcacgactata |
111 |
Q |
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| T |
31944222 |
agacttaatctcggtatattagttcattagtctcatggcttatttttagcttgagccaaaacttttaaaaatcaacaatatgttatgtttcacgactata |
31944123 |
T |
|
| Q |
112 |
ttaattcaaaataaacaatgggtagctcaagagattaatagttaagagattaaatgagttaaggactaaaaaaggtttagagtttgaatattgaaaagtg |
211 |
Q |
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| T |
31944122 |
ttaattcaaaataaacaatgggtagctcaagagattaatagttaagagattaaatgagttaaggactaaaaaaggtttagaatttgaatattgaaaagtg |
31944023 |
T |
|
| Q |
212 |
acaaaaatattaaataaggtggattatctcttcccttcgaaattttctctatacataagagttgatgatcgaatctttgaccacttgtttaaggggtaca |
311 |
Q |
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| T |
31944022 |
acaaaaatattaaataaggtggattatctcttcccttcaaaattttctctatacataagagttgatgatcgaatctttgaccacttgtttaaggggtaca |
31943923 |
T |
|
| Q |
312 |
agttccttatcactttaagcaacacattgcttcatgtgttttgttatttaagaannnnnnnnncttgaaattttttaaagttgggcaaggcttaaagagg |
411 |
Q |
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| T |
31943922 |
agttccttaccactttaagcaacacattgcttaatgtgttttgttatttaagattttttttttcttgaaattttttaaagttgggcaaggcttaaagagg |
31943823 |
T |
|
| Q |
412 |
tatgttctaaaccgggtctaaactcaatccccataagtctaacctagtaaaaaggtcaacacttgcaccaagcatgcaacaaataactcatgatctacca |
511 |
Q |
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| T |
31943822 |
tatgttctaaaccgggtctaaactcaatccccataaatctaacctaataaaaaggtcaacactcgcaccaaacatgcaataaataactcatgatctacca |
31943723 |
T |
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| Q |
512 |
ccatggacaacgaaa |
526 |
Q |
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||||||||||||||| |
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| T |
31943722 |
ccatggacaacgaaa |
31943708 |
T |
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