View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13451_high_2 (Length: 674)
Name: NF13451_high_2
Description: NF13451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13451_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 514; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 128 - 645
Target Start/End: Complemental strand, 36412089 - 36411572
Alignment:
| Q |
128 |
agaaactcatcctcgggaggctgaacaaactgcagcttgagccttccatcctctctataagcacgcaagacctcctgtgttggtatccttacctcttcaa |
227 |
Q |
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| T |
36412089 |
agaaactcatcctcgggaggctgaacaaactgcagcttgagccttccatcctctctataagcacgcaagacctcctgtgtgggtatccttacctcttcaa |
36411990 |
T |
|
| Q |
228 |
ggacaaatcttccattattcctaatagacctgaaataaacccaaggcttcccagtcctccctatgcttgaaatgggaggagggtactcactaacccttaa |
327 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36411989 |
ggacaaatcttccattattcctaatagacctgaaataaacccaaggcttcccagtcctccctatgcttgaaatgggaggagggtactcactaacccttaa |
36411890 |
T |
|
| Q |
328 |
cctcctacattctccataagaatgatgtcttgaagataaatgatgttcgacacgtttctcattttgatcaatttgtaaagattcattcgctccactcttt |
427 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36411889 |
cctcctacattctccataagaatgatgtcttgaagataaatgatgttcgacacgtttctcattttgatcaatttgtaaagattcattcgctccactcttt |
36411790 |
T |
|
| Q |
428 |
gagtcctcgacatcgtctgaactctcaaaaccaagaccttcggtgcaaagatgcatactttcggaattcaaccatgaaaagctgtcactgcttttgtgcc |
527 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36411789 |
gagtcctcgacatcgtctgaactctcaaaaccaagaccttcggtgcaaagatgcatactttcggaattcaaccatgaaaagctgtcactgcttttgtgcc |
36411690 |
T |
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| Q |
528 |
tgttggtatgccttgctattggtgtaattgaaaaagaagctgaagatggagtttggatagtgtcagaagactcagactctttgatctggttgagctttgc |
627 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36411689 |
tgttggtatgccttgctattggtgtaattgaaaaagaagctgaagatggagtttggatagtgtcagaagactcagactctttgatctggttgagctttgc |
36411590 |
T |
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| Q |
628 |
gtggtttatctctggtga |
645 |
Q |
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|||||||||||||||||| |
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| T |
36411589 |
gtggtttatctctggtga |
36411572 |
T |
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