View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13455_high_6 (Length: 250)
Name: NF13455_high_6
Description: NF13455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13455_high_6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 45553824 - 45553575
Alignment:
| Q |
1 |
ttgtgagagaaatagaaaatgatgaggaagacggaaaccacgaaagggaaagggtggtttttgatgcaactgtggccgataattgcgttggtggggtcgt |
100 |
Q |
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| T |
45553824 |
ttgtgagagaaatagaaaatgatgaggaagacggaaaccacgaaagggaaagggtggtttttgatgcaactgtggccgataattgcgttggtggggtcgt |
45553725 |
T |
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| Q |
101 |
tttggagattcaatatgaaccgttggatgtgaagnnnnnnnnnnnnaattaaattattaatacatggaaattggaaatttgtgataattaaagattaaaa |
200 |
Q |
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| T |
45553724 |
tttggagattcaatatgaaccgttggatgtgaagtttttattttttaattaaattattaatacatggaaattggaaatttgtgataattaaagattaaaa |
45553625 |
T |
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| Q |
201 |
ataggaaaagtgacagctgtataacacggggttttgattctcttgtgtat |
250 |
Q |
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|||| |||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
45553624 |
atagtaaaattgacagctgtataacacggggttttgattctcttgtgtat |
45553575 |
T |
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