View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1345_high_1 (Length: 994)

Name: NF1345_high_1
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1345_high_1
NF1345_high_1
[»] chr3 (34 HSPs)
chr3 (417-839)||(44187643-44188083)
chr3 (28-396)||(6093516-6093886)
chr3 (281-377)||(27511807-27511902)
chr3 (795-841)||(6094201-6094247)
chr3 (281-395)||(9311105-9311219)
chr3 (282-344)||(52564543-52564605)
chr3 (281-393)||(12762582-12762694)
chr3 (281-396)||(52485536-52485651)
chr3 (281-342)||(29373736-29373797)
chr3 (281-394)||(46965993-46966106)
chr3 (279-327)||(6999302-6999350)
chr3 (279-389)||(10811206-10811316)
chr3 (279-341)||(36412242-36412304)
chr3 (279-342)||(51465805-51465867)
chr3 (279-327)||(23183545-23183593)
chr3 (279-327)||(55400131-55400179)
chr3 (279-342)||(10206864-10206926)
chr3 (281-332)||(33256436-33256487)
chr3 (281-344)||(34532304-34532367)
chr3 (279-342)||(36121939-36122001)
chr3 (279-342)||(37508389-37508451)
chr3 (279-342)||(39670988-39671050)
chr3 (279-342)||(39697113-39697175)
chr3 (280-343)||(46019579-46019641)
chr3 (279-342)||(46852023-46852085)
chr3 (281-344)||(46965902-46965965)
chr3 (279-342)||(50206861-50206923)
chr3 (279-342)||(54195458-54195520)
chr3 (282-378)||(33795618-33795715)
chr3 (281-327)||(38359209-38359255)
chr3 (353-395)||(45205341-45205383)
chr3 (281-327)||(45754772-45754818)
chr3 (318-396)||(55322646-55322724)
chr3 (281-346)||(34662113-34662178)
[»] chr1 (34 HSPs)
chr1 (417-830)||(43095731-43096160)
chr1 (281-396)||(11597700-11597815)
chr1 (281-396)||(21433293-21433408)
chr1 (281-344)||(12127979-12128043)
chr1 (279-342)||(29154896-29154958)
chr1 (279-342)||(33358049-33358111)
chr1 (279-342)||(47721527-47721589)
chr1 (279-342)||(47728519-47728581)
chr1 (279-342)||(48326086-48326147)
chr1 (279-342)||(50328032-50328094)
chr1 (281-342)||(41507087-41507147)
chr1 (279-327)||(36577303-36577351)
chr1 (279-327)||(40316835-40316883)
chr1 (279-327)||(52362614-52362662)
chr1 (278-342)||(52714791-52714854)
chr1 (279-342)||(3603229-3603291)
chr1 (279-342)||(5486014-5486076)
chr1 (279-342)||(8200193-8200255)
chr1 (279-342)||(13489780-13489842)
chr1 (279-342)||(20565009-20565071)
chr1 (280-327)||(23621373-23621420)
chr1 (280-327)||(23738152-23738199)
chr1 (279-342)||(26837570-26837632)
chr1 (285-332)||(36439762-36439809)
chr1 (354-396)||(41677290-41677332)
chr1 (280-342)||(51286260-51286321)
chr1 (281-342)||(4629641-4629702)
chr1 (359-396)||(15470027-15470064)
chr1 (281-314)||(41451773-41451806)
chr1 (281-342)||(43367794-43367855)
chr1 (281-338)||(46281558-46281615)
chr1 (281-342)||(47214325-47214385)
chr1 (281-342)||(51191906-51191966)
chr1 (281-342)||(51571239-51571300)
[»] chr2 (25 HSPs)
chr2 (417-839)||(32726786-32727210)
chr2 (281-381)||(14255381-14255481)
chr2 (281-396)||(42430713-42430828)
chr2 (281-395)||(31296602-31296716)
chr2 (279-342)||(3012743-3012805)
chr2 (279-342)||(23352798-23352860)
chr2 (281-409)||(44977392-44977520)
chr2 (279-342)||(36643975-36644037)
chr2 (280-327)||(41586560-41586607)
chr2 (281-343)||(14890981-14891043)
chr2 (280-342)||(44254719-44254780)
chr2 (281-342)||(5032041-5032102)
chr2 (281-338)||(34134663-34134720)
chr2 (279-327)||(6170762-6170810)
chr2 (279-327)||(13765532-13765580)
chr2 (279-327)||(24562908-24562956)
chr2 (279-342)||(670363-670425)
chr2 (279-342)||(32869944-32870006)
chr2 (281-395)||(1907656-1907770)
chr2 (280-342)||(9634328-9634389)
chr2 (280-342)||(14233610-14233671)
chr2 (281-395)||(28494924-28495038)
chr2 (280-342)||(45420253-45420315)
chr2 (282-315)||(9377600-9377633)
chr2 (281-342)||(44050132-44050193)
[»] chr6 (17 HSPs)
chr6 (119-274)||(16485706-16485861)
chr6 (280-396)||(13423032-13423148)
chr6 (282-342)||(30956189-30956249)
chr6 (281-380)||(25127723-25127822)
chr6 (279-341)||(3832582-3832643)
chr6 (279-342)||(13143273-13143335)
chr6 (281-344)||(30945929-30945992)
chr6 (280-327)||(32046830-32046877)
chr6 (281-342)||(33656888-33656949)
chr6 (282-342)||(30621857-30621917)
chr6 (279-342)||(6531071-6531133)
chr6 (547-650)||(10768988-10769091)
chr6 (280-327)||(20822761-20822808)
chr6 (279-342)||(32459407-32459469)
chr6 (279-342)||(35213452-35213514)
chr6 (280-342)||(2075343-2075404)
chr6 (279-340)||(18141192-18141252)
[»] chr5 (23 HSPs)
chr5 (119-274)||(21817049-21817204)
chr5 (100-274)||(31895193-31895367)
chr5 (276-342)||(15952933-15952998)
chr5 (279-342)||(8675324-8675386)
chr5 (279-342)||(41175597-41175659)
chr5 (281-395)||(19952064-19952178)
chr5 (281-338)||(6940042-6940099)
chr5 (281-338)||(18695440-18695497)
chr5 (281-342)||(36321689-36321750)
chr5 (283-339)||(1293013-1293069)
chr5 (279-327)||(3640088-3640136)
chr5 (280-396)||(42267409-42267524)
chr5 (281-396)||(4088507-4088622)
chr5 (353-396)||(7287154-7287197)
chr5 (279-342)||(10649553-10649615)
chr5 (279-389)||(29463066-29463176)
chr5 (279-342)||(34124739-34124801)
chr5 (279-342)||(43441856-43441918)
chr5 (280-342)||(2224909-2224970)
chr5 (280-342)||(38704089-38704150)
chr5 (281-342)||(4098729-4098790)
chr5 (281-338)||(9939324-9939381)
chr5 (281-396)||(33958152-33958267)
[»] chr4 (36 HSPs)
chr4 (281-396)||(31559602-31559718)
chr4 (281-396)||(5249932-5250051)
chr4 (281-394)||(47288148-47288261)
chr4 (279-342)||(2999230-2999292)
chr4 (281-344)||(27371256-27371319)
chr4 (282-325)||(39158239-39158283)
chr4 (279-342)||(17683459-17683521)
chr4 (279-342)||(22819767-22819829)
chr4 (283-342)||(23662211-23662270)
chr4 (281-395)||(12595523-12595637)
chr4 (279-341)||(51887782-51887842)
chr4 (281-395)||(52430942-52431056)
chr4 (281-338)||(32696681-32696738)
chr4 (269-342)||(41486025-41486096)
chr4 (281-338)||(42815526-42815583)
chr4 (281-342)||(50831648-50831709)
chr4 (279-342)||(5932049-5932111)
chr4 (279-342)||(9118755-9118817)
chr4 (279-342)||(14451511-14451573)
chr4 (281-376)||(23822141-23822235)
chr4 (281-344)||(35936081-35936144)
chr4 (285-396)||(44257626-44257737)
chr4 (279-342)||(47099138-47099200)
chr4 (279-342)||(47965855-47965917)
chr4 (279-342)||(51194387-51194449)
chr4 (279-342)||(54669475-54669537)
chr4 (280-342)||(624203-624265)
chr4 (281-343)||(21392686-21392748)
chr4 (284-342)||(24990232-24990290)
chr4 (354-396)||(26732288-26732330)
chr4 (280-342)||(33899218-33899279)
chr4 (281-327)||(42491206-42491252)
chr4 (284-342)||(52895346-52895404)
chr4 (280-342)||(56271478-56271539)
chr4 (279-391)||(1815892-1816004)
chr4 (285-350)||(28417548-28417613)
[»] scaffold0174 (1 HSPs)
scaffold0174 (279-345)||(34683-34750)
[»] chr8 (19 HSPs)
chr8 (279-342)||(4658145-4658207)
chr8 (281-396)||(5740678-5740793)
chr8 (136-203)||(15959019-15959086)
chr8 (281-396)||(36969567-36969684)
chr8 (279-327)||(36568093-36568141)
chr8 (279-342)||(36885379-36885441)
chr8 (281-378)||(6445258-6445358)
chr8 (281-338)||(10644694-10644751)
chr8 (352-396)||(28756599-28756643)
chr8 (280-344)||(33539521-33539585)
chr8 (279-343)||(37597355-37597418)
chr8 (279-342)||(12707268-12707330)
chr8 (279-342)||(30439397-30439459)
chr8 (279-342)||(36110256-36110318)
chr8 (282-395)||(5574320-5574433)
chr8 (282-332)||(24795376-24795426)
chr8 (360-413)||(6237803-6237856)
chr8 (281-342)||(13106597-13106658)
chr8 (281-342)||(26000658-26000719)
[»] chr7 (18 HSPs)
chr7 (281-378)||(6109863-6109961)
chr7 (279-342)||(7817754-7817816)
chr7 (279-342)||(11352865-11352927)
chr7 (280-342)||(20454364-20454426)
chr7 (281-409)||(49069300-49069422)
chr7 (286-342)||(46829597-46829653)
chr7 (281-340)||(1471183-1471242)
chr7 (279-342)||(10055523-10055585)
chr7 (281-396)||(19896620-19896735)
chr7 (279-342)||(28036862-28036924)
chr7 (279-342)||(32815286-32815348)
chr7 (281-396)||(41018727-41018842)
chr7 (281-323)||(237149-237191)
chr7 (280-342)||(3062448-3062509)
chr7 (280-342)||(21822491-21822552)
chr7 (281-395)||(43159468-43159581)
chr7 (353-395)||(46095015-46095057)
chr7 (278-342)||(11565010-11565073)
[»] scaffold0136 (1 HSPs)
scaffold0136 (279-342)||(38543-38605)
[»] scaffold0471 (1 HSPs)
scaffold0471 (279-342)||(125-187)
[»] scaffold0042 (1 HSPs)
scaffold0042 (281-323)||(10824-10866)


Alignment Details
Target: chr3 (Bit Score: 287; Significance: 1e-160; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 417 - 839
Target Start/End: Original strand, 44187643 - 44188083
Alignment:
Q  417 tttttatcatcttgactttgatctcttagatcatataatttggagatttctc--------atgatatggcttgcaacaccttttgctgatctatgattct 508  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||        ||| ||||||||||| ||||||||||||||||||||||||    
T  44187643 tttttatcatcttggctttgatctcttagagcatataatttggagatttctccaactgacatggtatggcttgcagcaccttttgctgatctatgattct 44187742  T
Q  509 tttgatctttagtgttttgtctttcccattgccttgaagccatccatctgtcaagccaattccatccccaatggggattgtttggatccataattgtggc 608  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44187743 tttgatccttagtgttttgtccttcccatggccttgaagccatccatctatcaagccaattccatctccaatggggattgtttggatccataattgtggc 44187842  T
Q  609 atctgtaggttttgaagagttcctctatatttgctgttagagaaattaagctataggttattatccatataaaactatttcatgtttgcttatgataaac 708  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44187843 atctgtaggttttgaagagttcctccatgtttgctgttagagaaattaagctataggttattatccatat-aaactatttcatgtttgcttatgataaac 44187941  T
Q  709 cttaaatgaataacttatatgtatagtgtaatcag-----------aatagtcaattacataactgcttagttagaaatcgtagaatatgatgtagcgaa 797  Q
    ||||||||||||| ||||| ||| |||||||||||           || |||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  44187942 cttaaatgaataaattataagtacagtgtaatcagaactgccaataaacagtcaattacatgactgcttagttaaaaatcgtaaaatatgatgtagcgaa 44188041  T
Q  798 ttgaagagttgcgattaaatgttagtgtaaaataacttttga 839  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  44188042 ttgaagagttgcaattgaatgttagtgtaaaataacttttga 44188083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 28 - 396
Target Start/End: Original strand, 6093516 - 6093886
Alignment:
Q  28 atcataggcgaatcaattgggtgacaaaatgca-tgataaaattaattttaaaatgataaacttt-aagcattgatccatcataaaatgtatctttaaga 125  Q
    ||||||||| ||||||||||||||||  ||||| | ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  6093516 atcataggctaatcaattgggtgacattatgcactcataaagttaattttaaaatgataaatttttaagcattgatccatcataaaatgtatctttaaga 6093615  T
Q  126 attacacaaccagatggtcaatgtttatatgcataaatcaacagttaaaaagcctaatcacacgcctaaaaagttaaagtcgtccggtcaaaggcactca 225  Q
    |||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  6093616 attacacacccaaatgatcaatgtttatatgcataaatcaatagttaaaaagcctaatcacatgcctaaaaagttaaagtcatccagtcaaaggcactca 6093715  T
Q  226 gatcacaccatatagaaaaaccttacgaagtcttgaaaacataaatttagagagagtgttatttgaacaaccatttatttgacaacttattggacaacca 325  Q
     |||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||| |||||    
T  6093716 tatcacaccatataggaaaaccttacgaagtcttgaaagcataaatttagagggagtgttatttgaaaaactatttatttgacaacttattggataacca 6093815  T
Q  326 tatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagagaagataaaaatataatg 396  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||  |||||| ||||||    
T  6093816 tatattttcaaagaaaagtggttattaacacagaaaccaaagcaatagagagagaaagtaaaaagataatg 6093886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 281 - 377
Target Start/End: Complemental strand, 27511902 - 27511807
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagag 377  Q
    |||||||||||||||| |||| | ||||||||| ||||||||||||| |||| |||||||||||   |||  |||| ||||||||||||||||||||    
T  27511902 gtgttatttgaacaacaatttgtgtgacaactt-ttggacaaccataaatttacaaagaaaagtagatattgacacggaaaccaaaacaatagagag 27511807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 795 - 841
Target Start/End: Original strand, 6094201 - 6094247
Alignment:
Q  795 gaattgaagagttgcgattaaatgttagtgtaaaataacttttgata 841  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  6094201 gaattgaagagttgcgattgaatgttagtgtaaaataacttttgata 6094247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 281 - 395
Target Start/End: Complemental strand, 9311219 - 9311105
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||| ||||| ||  ||||||||| ||||||||||||||||  ||||||||||   |||  ||||  ||||||||||||||| ||||||    
T  9311219 gtgttatttgaacaatcatttgttgaacaacttatgggacaaccatatatttaaaaagaaaagtaggtattgacacgaaaaccaaaacaatagggagaga 9311120  T
Q  381 agataaaaatataat 395  Q
    |  |||||| |||||    
T  9311119 aagtaaaaacataat 9311105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 52564543 - 52564605
Alignment:
Q  282 tgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| |||| |||||||||||    
T  52564543 tgttatttgaacaaccatttctatgacaacttatgggacaaccatagatttacaaagaaaagt 52564605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 12762582 - 12762694
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||| ||||||  |||||| |||| ||||||||||| |||| ||||||||| |  ||||  ||||| ||| ||||  |||| |||||||    
T  12762582 gtgttatttgaacaatcatttacatgacaatttatgggacaaccataaatttacaaagaaaaatagttattgacacaaaaatcaaagtaataaagagaga 12762681  T
Q  381 agataaaaatata 393  Q
    | |||||||||||    
T  12762682 aaataaaaatata 12762694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 52485651 - 52485536
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||| | |||| ||||||||| || ||||||||||||| ||| |||||||||||   |||   |||  |||||||| ||||||||||| |    
T  52485651 gtgttatttgaacatctatttgtttgacaacctaatggacaaccatatttttacaaagaaaagtatgtattggcacgaaaaccaaagcaatagagagata 52485552  T
Q  381 agataaaaatataatg 396  Q
    |  |||||||||||||    
T  52485551 aagtaaaaatataatg 52485536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 29373736 - 29373797
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||| ||  |||||||||||||| ||||||||||||||  ||||||||    
T  29373736 gtgttatttgaacaaccacttgattgacaacttattgaacaaccatatatttataaagaaaa 29373797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 281 - 394
Target Start/End: Original strand, 46965993 - 46966106
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||||||||| | ||||||||| | |||||| |||| |||| ||||||||  |   |||| ||||  |||||||||||||||| |||||    
T  46965993 gtgttatttgaacaaccatttgtgtgacaacttttcggacaatcataaatttacaaagaaagatagatatcgacacgaaaaccaaaacaatagatagaga 46966092  T
Q  381 agataaaaatataa 394  Q
    |  |||||| ||||    
T  46966093 aagtaaaaacataa 46966106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 6999350 - 6999302
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||||    
T  6999350 gagtgttatttgaacaaccatttggttgacaacttatgggacaaccata 6999302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 389
Target Start/End: Complemental strand, 10811316 - 10811206
Alignment:
Q  279 gagtgttatttgaacaaccatttat-ttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagag 377  Q
    ||||||||||||||||||||||| | |||||||||| | |||||||| || || | ||||||||  ||| |||  ||||| | |||||| ||||||||||    
T  10811316 gagtgttatttgaacaaccatttttgttgacaacttttgggacaacc-taaatatacaaagaaatatgagtattgacacaaataccaaagcaatagagag 10811218  T
Q  378 agaagataaaaa 389  Q
    ||||| ||||||    
T  10811217 agaaggtaaaaa 10811206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 36412304 - 36412242
Alignment:
Q  279 gagtgttatttgaacaaccattt-atttgacaacttattggacaaccatatattttcaaagaaa 341  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| ||||||||    
T  36412304 gagtgttatttgaacaaccatttggtttgacaacttatgggacaaccata-atttacaaagaaa 36412242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 51465805 - 51465867
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  51465805 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 51465867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 23183593 - 23183545
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||    
T  23183593 gagtgttatttgaacaaccatttgattgacaacttattatacaaccata 23183545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 55400179 - 55400131
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||    
T  55400179 gagtgttatttgaacaaccatttggttgacaacttttaggacaaccata 55400131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 10206864 - 10206926
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  10206864 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 10206926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 33256487 - 33256436
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattt 332  Q
    ||||||||||||||||||||| | ||||||||| | ||||||||||| ||||    
T  33256487 gtgttatttgaacaaccatttgtgtgacaacttttaggacaaccataaattt 33256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 34532367 - 34532304
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    ||||||||||||||| ||||||  ||| || ||||  ||||||||||||||| |||||||||||    
T  34532367 gtgttatttgaacaatcatttacatgataatttatgtgacaaccatatatttacaaagaaaagt 34532304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 36122001 - 36121939
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  36122001 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 36121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 37508389 - 37508451
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  37508389 gagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatat-tttacaaagaaaa 37508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 39670988 - 39671050
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  39670988 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 39671050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 39697113 - 39697175
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||| ||||  |||||||||| | ||||||||||| |||| |||||||||    
T  39697113 gagtgttatttgaacaactatttgattgacaacttttgggacaaccata-atttacaaagaaaa 39697175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 46019641 - 46019579
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaag 343  Q
    ||||||||||||||||||||||  |||||||||| | | ||||||||| |||| ||||||||||    
T  46019641 agtgttatttgaacaaccatttggttgacaacttttggaacaaccata-atttacaaagaaaag 46019579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 46852023 - 46852085
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | |||||| |||| |||| |||||||||    
T  46852023 gagtgttatttgaacaaccatttggttgacaacttttgggacaatcata-atttacaaagaaaa 46852085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Original strand, 46965902 - 46965965
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    |||||||||||||||| |||| | ||||||||| | |||||| |||| |||| |||||||||||    
T  46965902 gtgttatttgaacaacaatttgtgtgacaacttttaggacaatcataaatttacaaagaaaagt 46965965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 50206861 - 50206923
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||| |||||| ||||| |||||||||| | ||||||||||| |||| |||||||||    
T  50206861 gagtgttatttaaacaactatttagttgacaacttttaggacaaccata-atttacaaagaaaa 50206923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 54195520 - 54195458
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| |||||||||| |||| |||||||||    
T  54195520 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccata-atttacaaagaaaa 54195458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 378
Target Start/End: Original strand, 33795618 - 33795715
Alignment:
Q  282 tgttatttgaacaacc-atttatttgacaacttattggacaaccatatattttcaaag-aaaagtgattatcaacacagaaaccaaaacaatagagaga 378  Q
    |||||||||||||||| ||||| |||||||||||   |||||||||| |||| ||||| |||||| |||||  | || |||| ||||||||||||||||    
T  33795618 tgttatttgaacaaccaatttagttgacaacttacgtgacaaccata-atttacaaagaaaaagtaattatttatacggaaaacaaaacaatagagaga 33795715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 38359209 - 38359255
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||  |||| ||||| |||||||||||||    
T  38359209 gtgttatttgaacaaccatttgattgagaactttttggacaaccata 38359255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 45205383 - 45205341
Alignment:
Q  353 acacagaaaccaaaacaatagagagagaagataaaaatataat 395  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  45205383 acacggaaaccaaaacaatagagagagaaattaaaaatataat 45205341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 45754818 - 45754772
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||  |||| |||||||| ||||||||||    
T  45754818 gtgttatttgaacaaccatttgattgataacttattagacaaccata 45754772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 55322646 - 55322724
Alignment:
Q  318 gacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagagaagataaaaatataatg 396  Q
    |||||||||| |||| ||||||||| |   |||| |||| |||||||||| |||||||||||||  |||||| ||||||    
T  55322646 gacaaccataaatttacaaagaaaaatatgtatcgacacggaaaccaaaaaaatagagagagaaagtaaaaacataatg 55322724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 346
Target Start/End: Complemental strand, 34662178 - 34662113
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtga 346  Q
    |||||||||||| |||| ||||| ||| ||||||| ||||||| ||| ||||  ||||||||||||    
T  34662178 gtgttatttgaataaccttttatatgataacttatgggacaactatagatttgtaaagaaaagtga 34662113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 237; Significance: 1e-130; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 417 - 830
Target Start/End: Complemental strand, 43096160 - 43095731
Alignment:
Q  417 tttttatcatcttgactttgatctcttagatcatataatttggagatttctc--------atgatatggcttgcaacaccttttgctgatctatgattct 508  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||        ||| |||||||||||||||||||| |||||||||||||||    
T  43096160 tttttgtcatcttgattttgatctcttagagcatataatttggagatttctccaactgacatggtatggcttgcaacaccttttcctgatctatgattct 43096061  T
Q  509 tttgatctttagtgttttgtctttcccattgccttgaagccatccatctgtcaagccaattccatccccaatggggattgtttggatccataattgtggc 608  Q
    | ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43096060 tctgatctttagtgttttgtccttcccatggccttgaagccatccatctgtcaagccaattccatccccaatggggattgtttggatccataattgtggc 43095961  T
Q  609 atctgtaggttttgaagagttcctctatatttgctgttagagaaattaagctataggttattatccatataaaactatttcatgtttgcttatgataaac 708  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||     
T  43095960 atctgtagcttttgaagagttcctccatgtttgctgttagagaaattaagttatatgttattatccatataaaactatttcatgtttgcttatcataaat 43095861  T
Q  709 cttaaatgaataacttatatgtat----agtgtaatcagaa-tagtcaattacataactg--cttagtt-agaaatcgtagaatatgatgtagcgaattg 800  Q
    |||||| |||||| ||||||||||    |||||||||| || | | || |||||||| ||   |||||| | ||| |||| | || |||||||| |||||    
T  43095860 cttaaaggaataaattatatgtattgtaagtgtaatcataactcgccatttacataattgtttttagttaaaaaaccgtaaagtacgatgtagcaaattg 43095761  T
Q  801 aagagttgcgattaaatgttagtgtaaaat 830  Q
    |||||||| |||||||||||||||||||||    
T  43095760 aagagttgtgattaaatgttagtgtaaaat 43095731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 11597815 - 11597700
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||| ||||||  |||||||||||| ||||||||||| |||| |||||||||||   ||| | |||  ||||||||||||||||||||||    
T  11597815 gtgttatttgaacatccatttgcttgacaacttatgggacaaccatagatttacaaagaaaagtagatattagcacgaaaaccaaaacaatagagagaga 11597716  T
Q  381 agataaaaatataatg 396  Q
    |  |||||| ||||||    
T  11597715 aagtaaaaacataatg 11597700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 21433293 - 21433408
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||| ||||| | |||||||||   ||||||||||| ||||  ||||||||||   |||| |||  ||||||||| |||||||||||||    
T  21433293 gtgttatttgaacaatcatttgtgtgacaactttcaggacaaccataaatttgtaaagaaaagtaggtatcgacatggaaaccaaagcaatagagagaga 21433392  T
Q  381 agataaaaatataatg 396  Q
    | ||||||| ||||||    
T  21433393 aaataaaaacataatg 21433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 12128043 - 12127979
Alignment:
Q  281 gtgttatttgaacaaccatttat-ttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||||| |||| |||||||||||    
T  12128043 gtgttatttgaacaaccatttgtattgataacttatgggacaaccatagatttccaaagaaaagt 12127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 29154958 - 29154896
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| ||| |||| |||||||||    
T  29154958 gagtgttatttgaacaaccatttggttgacaacttatgggacaacgata-atttacaaagaaaa 29154896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 33358049 - 33358111
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  ||||||||||||  |||||||||| |||| |||||||||    
T  33358049 gagtgttatttgaacaaccatttggttgacaacttatgtgacaaccata-atttacaaagaaaa 33358111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 47721589 - 47721527
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||| |||||||||||| | |||||||||| ||||||||||| |||| |||||||||    
T  47721589 gagtgttatttaaacaaccatttagtggacaacttatgggacaaccata-atttacaaagaaaa 47721527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 47728581 - 47728519
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||| |||||||||||| | |||||||||| ||||||||||| |||| |||||||||    
T  47728581 gagtgttatttaaacaaccatttagtggacaacttatgggacaaccata-atttacaaagaaaa 47728519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 48326147 - 48326086
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||| |||| |||||||||    
T  48326147 gagtgttatttgaacaaccatttggttgacaactt-ttggacaaccata-atttacaaagaaaa 48326086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 50328032 - 50328094
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  50328032 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 50328094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 41507087 - 41507147
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||  ||||||||||||| |||||| ||| |||| |||||||||    
T  41507087 gtgttatttgaacaaccatttggttgacaacttatttgacaactata-atttacaaagaaaa 41507147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 36577303 - 36577351
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||    
T  36577303 gagtgttatttgaacaaccatttggttgacaacttttaggacaaccata 36577351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 40316835 - 40316883
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||    
T  40316835 gagtgttatttgaacaaccatttggttgacaacttttaggacaaccata 40316883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 52362662 - 52362614
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||    
T  52362662 gagtgttatttgaacaaccatttggttgacaacttttaggacaaccata 52362614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 52714791 - 52714854
Alignment:
Q  278 agagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||||  |||||||||| | ||||||| ||| |||| |||||||||    
T  52714791 agagtgttatttgaacaaccatttgattgacaacttttgggacaacaata-atttacaaagaaaa 52714854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 3603291 - 3603229
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  3603291 gagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatat-tttacaaagaaaa 3603229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 5486076 - 5486014
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||| |||||| ||||||||||||   ||||||||| |||| |||||||||    
T  5486076 gagtgttatttgaacaatcatttacttgacaacttataaaacaaccata-atttacaaagaaaa 5486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 8200255 - 8200193
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||| || |||  |||||||||||| ||||||||||| |||| |||||||||    
T  8200255 gagtgttatttgaacagccttttggttgacaacttatgggacaaccata-atttacaaagaaaa 8200193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 13489842 - 13489780
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||| ||||  |||||||||| | ||||||||||| |||| |||||||||    
T  13489842 gagtgttatttgaacaactatttggttgacaacttctgggacaaccata-atttacaaagaaaa 13489780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 20565009 - 20565071
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  20565009 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 20565071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 23621373 - 23621420
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    ||||||||||||||||||||||  |||||||||||| | |||||||||    
T  23621373 agtgttatttgaacaaccatttgattgacaacttatggtacaaccata 23621420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 23738152 - 23738199
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    ||||||||||||||||||||||  |||||||||||| | |||||||||    
T  23738152 agtgttatttgaacaaccatttgattgacaacttatggtacaaccata 23738199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 26837632 - 26837570
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  26837632 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 26837570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 36439809 - 36439762
Alignment:
Q  285 tatttgaacaaccatttatttgacaacttattggacaaccatatattt 332  Q
    ||||||||||||||||||| ||||||||||| |||||| |||| ||||    
T  36439809 tatttgaacaaccatttatctgacaacttatcggacaatcatagattt 36439762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 41677290 - 41677332
Alignment:
Q  354 cacagaaaccaaaacaatagagagagaagataaaaatataatg 396  Q
    |||| |||||||||||||||||||| || ||||||||||||||    
T  41677290 cacaaaaaccaaaacaatagagagataaaataaaaatataatg 41677332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 51286260 - 51286321
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||| || | |||||||||||| |||||||| | |||| |||||||||    
T  51286260 agtgttatttgaacaaccaattttgtgacaacttatttgacaacca-aaatttacaaagaaaa 51286321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 4629641 - 4629702
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||| |||   ||||||||||||| |||||||| || ||| |||||||||    
T  4629641 gtgttatttgaacaactattagattgacaacttatttgacaaccacatctttacaaagaaaa 4629702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 396
Target Start/End: Original strand, 15470027 - 15470064
Alignment:
Q  359 aaaccaaaacaatagagagagaagataaaaatataatg 396  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  15470027 aaaccaaaacaatagagagagaaaataaaaagataatg 15470064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 314
Target Start/End: Complemental strand, 41451806 - 41451773
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaactta 314  Q
    ||||||||||||||||||||||| ||||||||||    
T  41451806 gtgttatttgaacaaccatttatatgacaactta 41451773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 43367794 - 43367855
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||| ||||| | ||||||||| | | ||||||||| |||| |||||||||    
T  43367794 gtgttatttgaacaatcatttgtgtgacaacttttagaacaaccataaatttacaaagaaaa 43367855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 46281615 - 46281558
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  | |||||| |||| |||||||||| |||| |||||    
T  46281615 gtgttatttgaacaaccatttgatagacaacatatttgacaaccataaatttacaaag 46281558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 47214385 - 47214325
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||| || | |||||||||||| |||||||| | |||| |||||||||    
T  47214385 gtgttatttgaacaaccaattttgtgacaacttatttgacaacca-aaatttacaaagaaaa 47214325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 51191966 - 51191906
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  51191966 gtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 51191906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 51571239 - 51571300
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||  ||||||| || | |||||||||||  ||| |||||||||    
T  51571239 gtgttatttgaacaaccatttgattgacaatttttgggacaaccataattttacaaagaaaa 51571300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 417 - 839
Target Start/End: Original strand, 32726786 - 32727210
Alignment:
Q  417 tttttatcatcttgacttt-gatctcttagatcatataatttggagatttctc--------atgatatggcttgcaacaccttttgctgatctatgattc 507  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||        ||| ||||||||||| |||||||||||||||||||||||    
T  32726786 tttttatcatctttacttttgatctcttagagcatataatttggagatttctccaactgacatggtatggcttgcagcaccttttgctgatctatgattc 32726885  T
Q  508 ttttgatctttagtgttttgtctttcccattgccttgaagccatccatctgtcaagccaattccatccccaatggggattgtttggatccataattgtgg 607  Q
    |||||||| ||||||||||||| ||||||| ||||||||||                |||||||||| |||||||||||||||||||||||||| ||| |    
T  32726886 ttttgatccttagtgttttgtccttcccatggccttgaagc----------------caattccatctccaatggggattgtttggatccataactgtag 32726969  T
Q  608 catctgtaggttttgaagagttcctctatatttgctgttagagaaattaagctataggttattatccatataaaactatttcatgtttgcttatgataaa 707  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32726970 catctgtaggttttgaagggttcctccatgtttgctgttagagaaattaagctataggttattatccatat-aaactatttcatgtttgcttatgataaa 32727068  T
Q  708 ccttaaatgaataacttatatgtatagtgtaatcag----------aatagtcaattacataactgcttagttagaaatcgtagaatatgatgtagcgaa 797  Q
    |||||||||||||| ||||| |||||||||||||||          || |||||||||||| |||||||||||| |||||||| ||||||||||||| ||    
T  32727069 ccttaaatgaataaattataagtatagtgtaatcagaactgccaataacagtcaattacatgactgcttagttaaaaatcgtaaaatatgatgtagcaaa 32727168  T
Q  798 ttgaagagttgcgattaaatgttagtgtaaaataacttttga 839  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  32727169 ttgaagagttgcaattgaatgttagtgtaaaataacttttga 32727210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 281 - 381
Target Start/End: Complemental strand, 14255481 - 14255381
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||||||||||||  |||||||| | ||||||||||| |||| |||||||||||   ||| |||||| |||||||  |||||||||||||    
T  14255481 gtgttatttgaacaaccatttatgcgacaacttttgggacaaccataaatttacaaagaaaagtaggtattaacacataaaccaatgcaatagagagaga 14255382  T
Q  381 a 381  Q
    |    
T  14255381 a 14255381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 42430828 - 42430713
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||||||||| | ||||||||| | | |||||||||  ||| |||||||||||   |||  |||| ||||||||||||||||||||||     
T  42430828 gtgttatttgaacaaccatttgtgtgacaacttttggaacaaccataagtttacaaagaaaagtaggtattgacacggaaaccaaaacaatagagagagg 42430729  T
Q  381 agataaaaatataatg 396  Q
    |  |||||| ||||||    
T  42430728 aagtaaaaacataatg 42430713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 281 - 395
Target Start/End: Complemental strand, 31296716 - 31296602
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||||||||  | ||||||||| |  |||||||||| |||| ||||||||| |   ||| ||||  ||||||||||||||||||| |||    
T  31296716 gtgttatttgaacaaccattagtgtgacaacttttatgacaaccataaatttacaaagaaaaatagatattaacatggaaaccaaaacaatagagacaga 31296617  T
Q  381 agataaaaatataat 395  Q
    |  ||||||||||||    
T  31296616 aagtaaaaatataat 31296602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 3012743 - 3012805
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||| ||||| ||||||||    
T  3012743 gagtgttatttgaacaaccatttggttgacaacttatgggacaaccata-atttttaaagaaaa 3012805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 23352798 - 23352860
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||| |||| |||||||||    
T  23352798 gagtgttatttgaacaaccatttggttgacaacttatgggacaaccata-atttacaaagaaaa 23352860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 409
Target Start/End: Original strand, 44977392 - 44977520
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||||||||||    || |||||||  |||||||||| |||| |||||||||  |  |||  ||||| |||||||| |||||||||||||    
T  44977392 gtgttatttgaacaaccatttgaacgaaaacttatgagacaaccataaatttacaaagaaaatggggtattgacacaaaaaccaaagcaatagagagaga 44977491  T
Q  381 agataaaaatataatggatatctgagaga 409  Q
    |  |||||| |||||| | || |||||||    
T  44977492 aagtaaaaacataatgtaaatatgagaga 44977520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 36643975 - 36644037
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  ||||||| |||| ||||||||||| |||| |||||||||    
T  36643975 gagtgttatttgaacaaccatttggttgacaatttatgggacaaccata-atttacaaagaaaa 36644037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 41586560 - 41586607
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||    
T  41586560 agtgttatttgaacaaccatttagttgacaacttatggaacaaccata 41586607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 14890981 - 14891043
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaag 343  Q
    |||||||||||||||||||||  || ||||||||| | ||||||||| |||| ||||||||||    
T  14890981 gtgttatttgaacaaccatttgattaacaacttatggaacaaccatagatttacaaagaaaag 14891043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 44254780 - 44254719
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||  |||||||||||| ||| ||||||| |||| |||||||||    
T  44254780 agtgttatttgaacaaccatttgattgacaacttatgggataaccata-atttacaaagaaaa 44254719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 5032102 - 5032041
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||| |||  | ||||||||||| |||||||||| |||| |||||||||    
T  5032102 gtgttatttgaacaaccttttgatagacaacttatttgacaaccataaatttacaaagaaaa 5032041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 34134663 - 34134720
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||| |||| |||||    
T  34134663 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaag 34134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 6170810 - 6170762
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||    
T  6170810 gagtgttatttgaacaaccatttggttgacaacttttaggacaaccata 6170762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 13765580 - 13765532
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||    
T  13765580 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata 13765532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 24562908 - 24562956
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||    
T  24562908 gagtgttatttgaacaaccatttggttgacaacttttaggacaaccata 24562956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 670363 - 670425
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  670363 gagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatat-tttacaaagaaaa 670425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 32870006 - 32869944
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  ||||||| || | ||||||||||| |||| |||||||||    
T  32870006 gagtgttatttgaacaaccatttggttgacaatttttgggacaaccata-atttacaaagaaaa 32869944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 395
Target Start/End: Original strand, 1907656 - 1907770
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||| ||||||  ||||||||| |  |||||||||| |||| |||||||||      ||  ||||| ||| ||||||||||||||||||    
T  1907656 gtgttatttgaacaatcatttagatgacaacttgtatgacaaccataaatttacaaagaaaaagcggaattgacacaaaaatcaaaacaatagagagaga 1907755  T
Q  381 agataaaaatataat 395  Q
    |  |||||| |||||    
T  1907756 aagtaaaaacataat 1907770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 9634328 - 9634389
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||| |||||  |||||||||| ||| ||||||||| |||| |||||||||    
T  9634328 agtgttatttgaacaatcatttggttgacaactttttgaacaaccata-atttacaaagaaaa 9634389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 14233610 - 14233671
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||  |||||||||||   |||||||||| |||| |||||||||    
T  14233610 agtgttatttgaacaaccattttgttgacaacttacaagacaaccata-atttacaaagaaaa 14233671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 395
Target Start/End: Complemental strand, 28495038 - 28494924
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||||||||||  | ||||||| |  |||||||||| |||| || |||||| |   |||  ||||| ||||||||| |||  |||||||    
T  28495038 gtgttatttgaacaaccatttaaattacaacttttgtgacaaccataaatttacacagaaaattaggtattgacacaaaaaccaaaataatttagagaga 28494939  T
Q  381 agataaaaatataat 395  Q
    | ||||||| |||||    
T  28494938 aaataaaaacataat 28494924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 45420315 - 45420253
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||| | ||||||||||||||| | | |||||||| || ||| |||||||||    
T  45420315 agtgttatttgaacatcaatttatttgacaactaaatagacaaccacatttttacaaagaaaa 45420253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 9377633 - 9377600
Alignment:
Q  282 tgttatttgaacaaccatttatttgacaacttat 315  Q
    ||||||||||||||||||||| ||||||||||||    
T  9377633 tgttatttgaacaaccatttagttgacaacttat 9377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 44050193 - 44050132
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||| |  |||||||| |  |||||||||| |||| |||||||||    
T  44050193 gtgttatttgaacaaccatttgtgcgacaacttttgagacaaccataaatttacaaagaaaa 44050132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 2e-51; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 119 - 274
Target Start/End: Complemental strand, 16485861 - 16485706
Alignment:
Q  119 tttaagaattacacaaccagatggtcaatgtttatatgcataaatcaacagttaaaaagcctaatcacacgcctaaaaagttaaagtcgtccggtcaaag 218  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||| |||||||    
T  16485861 tttaagaattacacactcagatgatcaatgtttatatgcataaatcaatagttaaaaagcctaatcacatgcctaaaaagttaaagtactccagtcaaag 16485762  T
Q  219 gcactcagatcacaccatatagaaaaaccttacgaagtcttgaaaacataaattta 274  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  16485761 gcactgagatcacaccatataggaaaaccttatgaagtcttgaaagtataaattta 16485706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 396
Target Start/End: Complemental strand, 13423148 - 13423032
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagag 379  Q
    ||||||||||||||| ||||||||||||||||  | |||||||| |||| ||| ||||||||| |   |||   |||| |||| |||| |||||||||||    
T  13423148 agtgttatttgaacatccatttatttgacaaccaagtggacaactatatttttacaaagaaaaatatgtattggcacaaaaactaaaataatagagagag 13423049  T
Q  380 aagataaaaatataatg 396  Q
    ||  |||||||||||||    
T  13423048 aaagtaaaaatataatg 13423032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 30956249 - 30956189
Alignment:
Q  282 tgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||| |||| |||||||||    
T  30956249 tgttatttgaacaaccatttatatgaaaacttatgggacaaccatagatttacaaagaaaa 30956189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 281 - 380
Target Start/End: Original strand, 25127723 - 25127822
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||||||||| |  ||||| || | ||||||||||| |||| |||||||||||   |||  |||| ||||||||| |||||||||||||    
T  25127723 gtgttatttgaacaaccatttgtgcgacaaattctgggacaaccataaatttacaaagaaaagtaggtattgacacggaaaccaaagcaatagagagaga 25127822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 3832643 - 3832582
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaa 341  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||| |||| ||||||||    
T  3832643 gagtgttatttgaacaaccatttgattgacaacttatgggacaaccata-atttacaaagaaa 3832582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 13143273 - 13143335
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  13143273 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 13143335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 30945992 - 30945929
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    ||||||||||||||||||||| | ||| ||||||| | ||||||||| |||| |||||||||||    
T  30945992 gtgttatttgaacaaccatttgtatgaaaacttatggaacaaccatagatttacaaagaaaagt 30945929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 32046877 - 32046830
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  32046877 agtgttatttgaacaaccatttggttgacaacttatgggacaaccata 32046830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 33656949 - 33656888
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||  ||||||| ||||| |||||||||| |||| |||| ||||    
T  33656949 gtgttatttgaacaaccatttgattgacaatttatttgacaaccataaatttacaaaaaaaa 33656888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 30621917 - 30621857
Alignment:
Q  282 tgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||  |||| ||||||| | | |||||||||||| |||||||||    
T  30621917 tgttatttgaacaaccatttgattgataacttatggaataaccatatatttacaaagaaaa 30621857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 6531071 - 6531133
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||| |||| || ||||||||||| |||| |||||||||    
T  6531071 gagtgttatttgaacaaccatttggttgataactaatgggacaaccata-atttacaaagaaaa 6531133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 650
Target Start/End: Original strand, 10768988 - 10769091
Alignment:
Q  547 gccatccatctgtcaagccaattccatccccaatggggattgtttggatccataattgtggcatctgtaggttttgaagagttcctctatatttgctgtt 646  Q
    ||||||||||| || | |||| |||||||||| || ||||||||||||||||||| |||    | | ||| ||||||||| ||| || || |||||||||    
T  10768988 gccatccatctctctaaccaactccatccccagtgaggattgtttggatccataaatgtttggtttatagattttgaagaattcttccatgtttgctgtt 10769087  T
Q  647 agag 650  Q
    ||||    
T  10769088 agag 10769091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 20822761 - 20822808
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    ||||||||||||||||||||||  |||||||||| | |||||||||||    
T  20822761 agtgttatttgaacaaccatttggttgacaacttttaggacaaccata 20822808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 32459407 - 32459469
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||| ||||  |||||||||| | ||||||||||| |||| |||||||||    
T  32459407 gagtgttatttgaacaacaatttgattgacaacttttaggacaaccata-atttacaaagaaaa 32459469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 35213452 - 35213514
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | |||||| |||| |||| |||||||||    
T  35213452 gagtgttatttgaacaaccatttggttgacaacttttgggacaatcata-atttacaaagaaaa 35213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 2075343 - 2075404
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||| ||   |||||||||||| |||||||||| |||| |||||||||    
T  2075343 agtgttatttgaacaaccaatttggtgacaacttatttgacaaccata-atttacaaagaaaa 2075404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 18141192 - 18141252
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaa 340  Q
    |||||||||||||||||||||||  |||||||||| |  |||||||||| |||| |||||||    
T  18141192 gagtgttatttgaacaaccatttggttgacaacttttgtgacaaccata-atttacaaagaa 18141252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 2e-51; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 119 - 274
Target Start/End: Original strand, 21817049 - 21817204
Alignment:
Q  119 tttaagaattacacaaccagatggtcaatgtttatatgcataaatcaacagttaaaaagcctaatcacacgcctaaaaagttaaagtcgtccggtcaaag 218  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||| |||||||    
T  21817049 tttaagaattacacactcagatgatcaatgtttatatgcataaatcaatagttaaaaagcctaatcacatgcctaaaaagttaaagtactccagtcaaag 21817148  T
Q  219 gcactcagatcacaccatatagaaaaaccttacgaagtcttgaaaacataaattta 274  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  21817149 gcactgagatcacaccatataggaaaaccttatgaagtcttgaaagtataaattta 21817204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 100 - 274
Target Start/End: Complemental strand, 31895367 - 31895193
Alignment:
Q  100 atccatcataaaatgtatctttaagaattacacaaccagatggtcaatgtttatatgcataaatcaacagttaaaaagcctaatcacacgcctaaaaagt 199  Q
    |||||||||||||| ||||||||||||||||||   || ||| |||||||||||||||||||||||| ||||||| | |||||||||| |||||||||||    
T  31895367 atccatcataaaatatatctttaagaattacactctcaaatgatcaatgtttatatgcataaatcaatagttaaacaccctaatcacatgcctaaaaagt 31895268  T
Q  200 taaagtcgtccggtcaaaggcactcagatcacaccatatagaaaaaccttacgaagtcttgaaaacataaattta 274  Q
    ||||||  ||  |||||||||||| ||||||| |||| ||||||||||||| ||||||||||||  |||||||||    
T  31895267 taaagtactctagtcaaaggcactgagatcaccccatgtagaaaaaccttatgaagtcttgaaagaataaattta 31895193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 15952933 - 15952998
Alignment:
Q  276 agagagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||||||  ||||||||||||  |||||||||| |||| |||||||||    
T  15952933 agagagtgttatttgaacaaccatttggttgacaacttatgtgacaaccata-atttacaaagaaaa 15952998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 8675324 - 8675386
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  8675324 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 8675386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 41175597 - 41175659
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  ||||||||||||  |||||||||| |||| |||||||||    
T  41175597 gagtgttatttgaacaaccatttggttgacaacttatgtgacaaccata-atttacaaagaaaa 41175659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 281 - 395
Target Start/End: Complemental strand, 19952178 - 19952064
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||| |||||||||| | |||||||  |||||||||||| |||| ||||||||| |   |||  || | |||| |||||||||||||| |||    
T  19952178 gtgttatttgaaaaaccatttatgtcacaactttatggacaaccataaatttacaaagaaaattaggtattgacgcggaaatcaaaacaatagagataga 19952079  T
Q  381 agataaaaatataat 395  Q
    |  |||||| |||||    
T  19952078 aagtaaaaacataat 19952064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 6940042 - 6940099
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||| |||| |||||    
T  6940042 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaag 6940099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 18695497 - 18695440
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||| |||| |||||    
T  18695497 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaag 18695440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 36321689 - 36321750
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||  || ||||||||||| | ||||||| |||| |||||||||    
T  36321689 gtgttatttgaacaaccatttgattaacaacttattgaaaaaccatagatttacaaagaaaa 36321750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 1293013 - 1293069
Alignment:
Q  283 gttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaaga 339  Q
    |||||||||| |||||||| | ||||||||| ||||||||||||| |||| ||||||    
T  1293013 gttatttgaataaccatttgtatgacaactttttggacaaccataaatttacaaaga 1293069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 3640088 - 3640136
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    ||||||||||||||| |||||||| ||||||||||||  ||||||||||    
T  3640088 gagtgttatttgaactaccatttagttgacaacttatgtgacaaccata 3640136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 280 - 396
Target Start/End: Complemental strand, 42267524 - 42267409
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagag 379  Q
    ||||||||||||||||||| ||   |||||||||||| |||||||||| ||||  ||||||||   | |||  |||| |||| || |||||||||||||     
T  42267524 agtgttatttgaacaaccaatttgatgacaacttatttgacaaccata-atttataaagaaaaaatagtattgacacggaaatcataacaatagagagat 42267426  T
Q  380 aagataaaaatataatg 396  Q
    ||  |||||||||||||    
T  42267425 aaagtaaaaatataatg 42267409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 4088622 - 4088507
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||| | |||| ||||||||| |||  ||||| ||||| ||| |||||||| ||   ||| | |||  |||||||| ||||||||| |||    
T  4088622 gtgttatttgaacatctatttttttgacaacctatgtgacaatcatatttttacaaagaaatgtatgtattagcacgaaaaccaaagcaatagagaaaga 4088523  T
Q  381 agataaaaatataatg 396  Q
    |  |||||||||||||    
T  4088522 aagtaaaaatataatg 4088507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 7287154 - 7287197
Alignment:
Q  353 acacagaaaccaaaacaatagagagagaagataaaaatataatg 396  Q
    ||||| |||||||||||||||||||||||  |||||||||||||    
T  7287154 acacaaaaaccaaaacaatagagagagaaagtaaaaatataatg 7287197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 10649615 - 10649553
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| |  |||||||||| |||| |||||||||    
T  10649615 gagtgttatttgaacaaccatttggttgacaacttttgtgacaaccata-atttacaaagaaaa 10649553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 389
Target Start/End: Complemental strand, 29463176 - 29463066
Alignment:
Q  279 gagtgttatttgaacaaccatttat-ttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagag 377  Q
    ||||||||||||||||||||||| | |||||||||| | |||||||| || || | ||||||||  ||| |||   |||| ||| |||| ||||||||||    
T  29463176 gagtgttatttgaacaaccatttttgttgacaacttgtgggacaacc-taaatatacaaagaaatatgagtattggcacaaaaatcaaagcaatagagag 29463078  T
Q  378 agaagataaaaa 389  Q
    |||| |||||||    
T  29463077 agaaaataaaaa 29463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 34124801 - 34124739
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||| ||||||| || |  |||||||||| |||| |||||||||    
T  34124801 gagtgttatttgaacaaccatttaattgacaatttttaagacaaccata-atttacaaagaaaa 34124739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 43441918 - 43441856
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| |  |||||||||| |||| |||||||||    
T  43441918 gagtgttatttgaacaaccatttggttgacaacttttaagacaaccata-atttacaaagaaaa 43441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 2224970 - 2224909
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||| ||   |||||||||||| |||||||||| |||| |||||||||    
T  2224970 agtgttatttgaacaaccaatttgatgacaacttatttgacaaccata-atttacaaagaaaa 2224909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 38704089 - 38704150
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||  || ||||||| | ||||||||||| |||| |||||||||    
T  38704089 agtgttatttgaacaaccatttgattaacaacttttgggacaaccata-atttacaaagaaaa 38704150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 4098790 - 4098729
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||| |||||||||||  ||||||||||||| |||||  ||| |||| |||||||||    
T  4098790 gtgttattttaacaaccattttgttgacaacttattagacaataataaatttacaaagaaaa 4098729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 9939324 - 9939381
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  | ||||| ||||| |||||||||| |||| |||||    
T  9939324 gtgttatttgaacaaccatttgatagacaatttatttgacaaccataaatttacaaag 9939381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 33958152 - 33958267
Alignment:
Q  281 gtgttatttgaacaaccatttatt-tgacaacttattggacaaccatatattttcaaagaaaa-gtgattatcaacacagaaaccaaaacaatagagaga 378  Q
    ||||||||||| ||||||||||   ||||||||| |  |||||||||| |||| ||||||||| | ||| ||  ||||| |||||||| |||||||||||    
T  33958152 gtgttatttga-caaccatttaaggtgacaacttttatgacaaccataaatttacaaagaaaaagagat-attgacacaaaaaccaaagcaatagagaga 33958249  T
Q  379 gaagataaaaatataatg 396  Q
    |||  |||||||||||||    
T  33958250 gaaagtaaaaatataatg 33958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 4e-16; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 31559718 - 31559602
Alignment:
Q  281 gtgttatttgaacaaccatttatttga-caacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagag 379  Q
    |||||||||||| |||||||| ||  | |||||||| ||||| ||||||||||  ||||||||||   ||| |||||  |||||||||||||||||||||    
T  31559718 gtgttatttgaataaccatttgttgaaacaacttatgggacagccatatatttagaaagaaaagtaggtattaacacgaaaaccaaaacaatagagagag 31559619  T
Q  380 aagataaaaatataatg 396  Q
    ||  |||||||||||||    
T  31559618 aaagtaaaaatataatg 31559602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 5250051 - 5249932
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt-gat---tatcaacacagaaaccaaaacaatagaga 376  Q
    ||||||||||||||||||||| || |||||||||| || |||||||||||||   ||||||||| |||   |||  ||||  ||||||||||||||||||    
T  5250051 gtgttatttgaacaaccatttgttggacaacttatggggcaaccatatatttagtaagaaaagtagataggtattgacacgaaaaccaaaacaatagaga 5249952  T
Q  377 gagaagataaaaatataatg 396  Q
    |||||  |||||| ||||||    
T  5249951 gagaaagtaaaaacataatg 5249932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 394
Target Start/End: Complemental strand, 47288261 - 47288148
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||| |||||||| | ||| || || | | ||||||||| |||| |||||||||||   |||| |||| ||||||||||||||||||||| |    
T  47288261 gtgttatttgaataaccatttgtgtgataatttttggaacaaccataaatttacaaagaaaagtaggtatcgacacggaaaccaaaacaatagagagaaa 47288162  T
Q  381 agataaaaatataa 394  Q
    |  |||||||||||    
T  47288161 aagtaaaaatataa 47288148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 2999292 - 2999230
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||| |||| |||||||||    
T  2999292 gagtgttatttgaacaaccatttaattgacaacttttaggacaaccata-atttacaaagaaaa 2999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 27371319 - 27371256
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    |||||||||||||||| |||||||||| |||||||  |||||||||| |||| |||||||||||    
T  27371319 gtgttatttgaacaacaatttatttgagaacttatgagacaaccataaatttacaaagaaaagt 27371256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 39158283 - 39158239
Alignment:
Q  282 tgttatttgaacaaccatttatt-tgacaacttattggacaacca 325  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  39158283 tgttatttgaacaaccatttattgtgacaacttattggacaacca 39158239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 17683521 - 17683459
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  17683521 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 17683459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 22819829 - 22819767
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  22819829 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 22819767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 23662211 - 23662270
Alignment:
Q  283 gttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||||||| ||||| || ||||||| |||| |||||||||    
T  23662211 gttatttgaacaaccatttaattgacaatttatttgataaccataaatttacaaagaaaa 23662270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 281 - 395
Target Start/End: Original strand, 12595523 - 12595637
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||||||||||   |||||| || | ||||||||||| ||||  |||| |||||   |||  ||||  ||||||||||||||||||||||    
T  12595523 gtgttatttgaacaaccattttgatgacaatttttgggacaaccataaatttataaaggaaagtaggtattgacacgaaaaccaaaacaatagagagaga 12595622  T
Q  381 agataaaaatataat 395  Q
    |  ||||| ||||||    
T  12595623 aagtaaaagtataat 12595637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 51887842 - 51887782
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaa 341  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||| |||| ||||||||    
T  51887842 gagtgttatttgaacaacc-tttaattgacaacttataggacaaccata-atttgcaaagaaa 51887782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 281 - 395
Target Start/End: Complemental strand, 52431056 - 52430942
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||||||||| | ||||||| |||  |||||  |||  ||| |||| |||||| | |||  ||||| ||||||||| |||||||||| |    
T  52431056 gtgttatttgaacaaccatttgtatgacaacctatgagacaattatagctttacaaacaaaagtaagtattgacacaaaaaccaaaataatagagagaca 52430957  T
Q  381 agataaaaatataat 395  Q
    || |||||| |||||    
T  52430956 aggtaaaaacataat 52430942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 32696681 - 32696738
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||||| |||| |||||    
T  32696681 gtgttatttgaacaaccatttggttgacaatttattgtacaaccataaatttacaaag 32696738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 41486025 - 41486096
Alignment:
Q  269 aatttagagagagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||| |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  41486025 aatttagag-gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 41486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 42815583 - 42815526
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||| |||| |||||    
T  42815583 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaag 42815526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 50831648 - 50831709
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||  |||||||||| | |||||||||||  ||| |||||||||    
T  50831648 gtgttatttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaa 50831709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 5932049 - 5932111
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  5932049 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 5932111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 9118755 - 9118817
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  9118755 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 9118817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 14451573 - 14451511
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  14451573 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 14451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 376
Target Start/End: Original strand, 23822141 - 23822235
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagaga 376  Q
    |||||||||||||||||| ||   |||||||||||| ||||||||||| || | | | |||||||| |||   ||| |||||||||||||||||||    
T  23822141 gtgttatttgaacaaccaatttggtgacaacttatttgacaaccatattttataagaaaaaagtga-tattggcacggaaaccaaaacaatagaga 23822235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 35936144 - 35936081
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    ||||||||||||||| ||||| | ||||||||| | ||||||||||| |||  |||||||||||    
T  35936144 gtgttatttgaacaatcatttgtgtgacaacttttaggacaaccatacattcacaaagaaaagt 35936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 396
Target Start/End: Original strand, 44257626 - 44257737
Alignment:
Q  285 tatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagagaagat 384  Q
    |||||||||| | |||| |||||||||| | ||||||| || || |||  ||||||||||   ||| |||||| | | ||||| |||||||||||||  |    
T  44257626 tatttgaacatcaatttgtttgacaactaaatggacaatcacatttttataaagaaaagtatgtattaacacaaatatcaaaataatagagagagaaagt 44257725  T
Q  385 aaaaatataatg 396  Q
    ||||||||||||    
T  44257726 aaaaatataatg 44257737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 47099200 - 47099138
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||| ||||| | ||||||||||| |||| |||||||||    
T  47099200 gagtgttatttgaacaaccatttggttgataacttttgggacaaccata-atttacaaagaaaa 47099138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 47965917 - 47965855
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  47965917 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 47965855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 51194449 - 51194387
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  51194449 gagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatat-tttacaaagaaaa 51194387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 54669475 - 54669537
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| |||||||||| |||| |||||||||    
T  54669475 gagtgttatttgaacaaccaatttgatgacaacttatttgacaaccata-atttacaaagaaaa 54669537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 624203 - 624265
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||| | ||   |||||||||||| ||||||||||| ||| |||||||||    
T  624203 agtgttatttgaacaactaatttggtgacaacttatttgacaaccatatttttacaaagaaaa 624265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 21392748 - 21392686
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaag 343  Q
    ||||||||| |||||||||||  ||||||| ||||| |||||||||| ||||  |||||||||    
T  21392748 gtgttatttaaacaaccattttgttgacaatttatttgacaaccatagatttataaagaaaag 21392686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 24990290 - 24990232
Alignment:
Q  284 ttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||| || ||||| | ||||||||||| ||||||||||| |||| |||||||||    
T  24990290 ttatttgaataatcatttgtatgacaacttatgggacaaccataaatttacaaagaaaa 24990232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 26732330 - 26732288
Alignment:
Q  354 cacagaaaccaaaacaatagagagagaagataaaaatataatg 396  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||    
T  26732330 cacaaaaaccaaaacaatagagagagaaaataaaaagataatg 26732288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 33899218 - 33899279
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  33899218 agtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 33899279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 42491252 - 42491206
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||  |||||||||| | |||||||||||    
T  42491252 gtgttatttgaacaaccatttgattgacaacttttgggacaaccata 42491206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 52895404 - 52895346
Alignment:
Q  284 ttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||  ||||||||| ||| |||||||||  |||| |||||||||    
T  52895404 ttatttgaacaaccatttgattgacaactcatttgacaaccatggatttacaaagaaaa 52895346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 56271539 - 56271478
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||| |||||| ||||||||||| |  |||||||||| |||| |||||||||    
T  56271539 agtgttatttgaacatccatttgtttgacaacttttatgacaaccata-atttacaaagaaaa 56271478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 391
Target Start/End: Original strand, 1815892 - 1816004
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa-gtgattatcaacacagaaaccaaaacaatagagag 377  Q
    ||||||||||||||||||||| |  ||||||||||||  |||| ||||| |||| ||||||||| |||  |||   |||| ||| |||||||||||||||    
T  1815892 gagtgttatttgaacaaccatctggttgacaacttatgtgacagccata-atttacaaagaaaaagtggatatttgcacaaaaatcaaaacaatagagag 1815990  T
Q  378 agaagataaaaata 391  Q
    | |||  |||||||    
T  1815991 ataagtgaaaaata 1816004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 28417548 - 28417613
Alignment:
Q  285 tatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattat 350  Q
    ||||||| |||| |||| |||||||| ||||||||||| ||||  ||| ||||||||||| |||||    
T  28417548 tatttgagcaactatttgtttgacaatttattggacaatcataattttacaaagaaaagtaattat 28417613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 34683 - 34750
Alignment:
Q  279 gagtgttattt-gaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtg 345  Q
    ||||||||||| ||||||||||||| |||| || ||||  ||||||||||||||||||||||||||||    
T  34683 gagtgttattttgaacaaccatttacttgataatttatgtgacaaccatatattttcaaagaaaagtg 34750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 4658145 - 4658207
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||| |||| |||||||||    
T  4658145 gagtgttatttgaacaaccatttaattgacaacttttaggacaaccata-atttacaaagaaaa 4658207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 5740678 - 5740793
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||| ||||||  | |||||||| | |||||||||||  ||| |||||||||     |||| ||||| ||||||||||||||||||||||    
T  5740678 gtgttatttgaacagccattttatagacaacttttaggacaaccataattttacaaagaaaaagaggtatcgacacaaaaaccaaaacaatagagagaga 5740777  T
Q  381 agataaaaatataatg 396  Q
    |  |||||| ||||||    
T  5740778 aagtaaaaacataatg 5740793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 15959086 - 15959019
Alignment:
Q  136 cagatggtcaatgtttatatgcataaatcaacagttaaaaagcctaatcacacgcctaaaaagttaaa 203  Q
    |||||| |||||||||||||||| |||| || ||||||||||| |||||||| ||||| |||||||||    
T  15959086 cagatgatcaatgtttatatgcacaaattaatagttaaaaagcttaatcacatgcctacaaagttaaa 15959019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 36969567 - 36969684
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagaga--ga 378  Q
    |||||||||||||| |||||| |||||||||||||  ||||||||||| ||| ||||||||  |   ||| |||||  ||||||||||||| || |  ||    
T  36969567 gtgttatttgaacatccatttgtttgacaacttatgcgacaaccatatttttacaaagaaatatatgtattaacacgaaaaccaaaacaatggaaaagga 36969666  T
Q  379 gaagataaaaatataatg 396  Q
    ||| ||||||||||||||    
T  36969667 gaaaataaaaatataatg 36969684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 36568141 - 36568093
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccata 327  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||||    
T  36568141 gagtgttatttgaacaaccatttgattgacaacttatgggacaaccata 36568093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 36885379 - 36885441
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  | |||||||||| ||||||||||| |||| |||||||||    
T  36885379 gagtgttatttgaacaaccatttggtggacaacttatgggacaaccata-atttacaaagaaaa 36885441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 281 - 378
Target Start/End: Complemental strand, 6445358 - 6445258
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa---gtgattatcaacacagaaaccaaaacaatagagag 377  Q
    ||||||||||||| |||||||  |||||||||||| ||||||||||| |||| |||| ||||   ||   ||| |||||| ||| |||||||||||||||    
T  6445358 gtgttatttgaacgaccatttgattgacaacttatgggacaaccataaatttacaaaaaaaaaaggtagatattaacacaaaaatcaaaacaatagagag 6445259  T
Q  378 a 378  Q
    |    
T  6445258 a 6445258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 10644694 - 10644751
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaag 338  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||| |||| |||||    
T  10644694 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaag 10644751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 28756643 - 28756599
Alignment:
Q  352 aacacagaaaccaaaacaatagagagagaagataaaaatataatg 396  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||    
T  28756643 aacacggaaaccaaaacaatagagagaaaaaataaaaatataatg 28756599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 33539585 - 33539521
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagt 344  Q
    ||||||||||||||| | ||||  ||||||||| | |||||||||| || |||||||||||||||    
T  33539585 agtgttatttgaacatcaatttgcttgacaactaaatggacaaccacattttttcaaagaaaagt 33539521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 37597418 - 37597355
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaag 343  Q
    ||||||||||||||||| ||| || ||||||||||||  |||||||||| |||| ||||||||||    
T  37597418 gagtgttatttgaacaatcatatagttgacaacttataagacaaccata-atttacaaagaaaag 37597355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 12707330 - 12707268
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  ||||  |||||| ||||||||||| |||| |||||||||    
T  12707330 gagtgttatttgaacaaccatttggttgagcacttatgggacaaccata-atttacaaagaaaa 12707268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 30439397 - 30439459
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||| |||||||  |||||||||| |||| |||||||||    
T  30439397 gagtgttatttgaacaaccatttggttgataacttatgtgacaaccata-atttacaaagaaaa 30439459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 36110318 - 36110256
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  36110318 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 36110256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 5574433 - 5574320
Alignment:
Q  282 tgttatttgaacaaccatttatttgacaact-tattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||| | ||||  ||||||||| ||||| ||| |||||| ||| |||||||||||   ||| |||||| ||| ||||| |||||||| |||    
T  5574433 tgttatttgaacatcaatttggttgacaactatattg-acacccatatttttacaaagaaaagtatgtattaacacaaaaatcaaaataatagagaaaga 5574335  T
Q  381 agataaaaatataat 395  Q
    |  ||||||||||||    
T  5574334 aagtaaaaatataat 5574320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 24795426 - 24795376
Alignment:
Q  282 tgttatttgaacaaccatttatttgacaacttattggacaaccatatattt 332  Q
    ||||||||||||||| |||| |||||||||||||  |||||||||| ||||    
T  24795426 tgttatttgaacaactatttgtttgacaacttatgagacaaccataaattt 24795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 6237803 - 6237856
Alignment:
Q  360 aaccaaaacaatagagagagaagataaaaatataatggatatctgagagaaaat 413  Q
    ||||||| |||||||||||||| |||||||||||||| | || ||| |||||||    
T  6237803 aaccaaagcaatagagagagaaaataaaaatataatgtaaatatgaaagaaaat 6237856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 13106658 - 13106597
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||  ||||||||| |   ||||||||| |||| |||||||||    
T  13106658 gtgttatttgaacaaccatttaggtgacaacttttataacaaccataaatttacaaagaaaa 13106597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 26000719 - 26000658
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||| |||||  |||||| ||||| ||||||| |||||||| |||| ||||    
T  26000719 gtgttatttgaacaatcatttggttgacatcttatgggacaactatatatttacaaaaaaaa 26000658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000002; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 378
Target Start/End: Original strand, 6109863 - 6109961
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgat-tatcaacacagaaaccaaaacaatagagaga 378  Q
    |||| |||||||||| |||||  ||||||||||||||||||| |||| |||| ||||||||| | || |||  ||||  ||||||||||||||||||||    
T  6109863 gtgtgatttgaacaatcattttgttgacaacttattggacaatcatagatttacaaagaaaaattatgtattgacacgaaaaccaaaacaatagagaga 6109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 7817816 - 7817754
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  ||||||||||||  |||||||||| |||| |||||||||    
T  7817816 gagtgttatttgaacaaccatttggttgacaacttatgtgacaaccata-atttacaaagaaaa 7817754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 11352865 - 11352927
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  11352865 gagtgttatttgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 11352927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 20454426 - 20454364
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||| || |||||||||  |||||||||| |||| |||| ||||    
T  20454426 agtgttatttgaacaaccatttacttaacaacttatgagacaaccatagatttccaaaaaaaa 20454364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 409
Target Start/End: Complemental strand, 49069422 - 49069300
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||||||||||||  |||||||||| | ||||||| |||  |||  ||||| |      |||  ||||| ||||||||||||||||||||||    
T  49069422 gtgttatttgaacaaccatttgattgacaacttttgggacaactataattttataaagaga------tatttacacaaaaaccaaaacaatagagagaga 49069329  T
Q  381 agataaaaatataatggatatctgagaga 409  Q
    | ||||||| |||||| | || |||||||    
T  49069328 aaataaaaacataatgtaaatatgagaga 49069300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 46829653 - 46829597
Alignment:
Q  286 atttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||  | ||||||||||| |||||||||| |||| |||||||||    
T  46829653 atttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaagaaaa 46829597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 1471183 - 1471242
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaa 340  Q
    |||||||||||||||| ||||  | ||||||||||| |||||||||| |||| |||||||    
T  1471183 gtgttatttgaacaactatttgatagacaacttatttgacaaccataaatttacaaagaa 1471242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 10055523 - 10055585
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||| ||| |||| |||||||||    
T  10055523 gagtgttatttaaacaaccatttggttgacaacttatgggacaactata-atttacaaagaaaa 10055585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 19896735 - 19896620
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||| |||||||  || ||||||| |||||| |||| |||| |||| ||||   | ||| |||||| ||| |||||||||||| ||| |    
T  19896735 gtgttatttgaacaatcatttatacgataacttatgggacaagcatagatttacaaataaaatcaagtattaacacaaaaatcaaaacaatagatagaaa 19896636  T
Q  381 agataaaaatataatg 396  Q
    |  |||||| ||||||    
T  19896635 aattaaaaacataatg 19896620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 28036924 - 28036862
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||| ||||||||||||||  |||||||||| | ||||||||||| |||| |||||||||    
T  28036924 gagtgttaattgaacaaccatttggttgacaacttttgggacaaccata-atttacaaagaaaa 28036862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 32815348 - 32815286
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  32815348 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 32815286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 41018842 - 41018727
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    |||||||||||| ||| |||||  ||||||||| |  ||||| |||| |||| |||||||||     ||| |||||| ||||||||  ||||||||||||    
T  41018842 gtgttatttgaataactatttaggtgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaacacaaaaaccaaagtaatagagagaga 41018743  T
Q  381 agataaaaatataatg 396  Q
    |  |||||||||||||    
T  41018742 aagtaaaaatataatg 41018727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 323
Target Start/End: Complemental strand, 237191 - 237149
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaac 323  Q
    ||||||||| || |||||||||||||||||||||| |||||||    
T  237191 gtgttattttaataaccatttatttgacaacttatgggacaac 237149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 3062509 - 3062448
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||  |||||||||||   |||||||||| |||| |||||||||    
T  3062509 agtgttatttgaacaaccatttggttgacaacttacatgacaaccata-atttacaaagaaaa 3062448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 21822491 - 21822552
Alignment:
Q  280 agtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    ||||||||||||||||||||||| |||||||||| |   ||||||||| |||| |||||||||    
T  21822491 agtgttatttgaacaaccatttagttgacaacttttaaaacaaccata-atttacaaagaaaa 21822552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 395
Target Start/End: Original strand, 43159468 - 43159581
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaagtgattatcaacacagaaaccaaaacaatagagagaga 380  Q
    ||||||||||||||||||||||  |||||||||    |||||||||| |||| |||||||||     |||  | ||| |||||||| |||||||||||||    
T  43159468 gtgttatttgaacaaccatttaggtgacaactttgatgacaaccataaatttacaaagaaaaagaggtattgataca-aaaccaaagcaatagagagaga 43159566  T
Q  381 agataaaaatataat 395  Q
    |  ||||||||||||    
T  43159567 aagtaaaaatataat 43159581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 46095057 - 46095015
Alignment:
Q  353 acacagaaaccaaaacaatagagagagaagataaaaatataat 395  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||    
T  46095057 acacaaaaaccaatacaatagagagagaaaataaaaatataat 46095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 11565073 - 11565010
Alignment:
Q  278 agagtgttatttgaacaaccatttatttgacaacttat-tggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||||||||| |||| |||||||||    
T  11565073 agagtgttatttgaacaacc-tttagttgacaacttatggggacaaccata-atttgcaaagaaaa 11565010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 38605 - 38543
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||||||| |||||||||| | ||||||| ||| |||| |||||||||    
T  38605 gagtgttatttgaacaaccatttagttgacaacttttgggacaactata-atttacaaagaaaa 38543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 187 - 125
Alignment:
Q  279 gagtgttatttgaacaaccatttatttgacaacttattggacaaccatatattttcaaagaaaa 342  Q
    |||||||||||||||||||| ||   |||||||||||| ||||||||||| ||| |||||||||    
T  187 gagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatat-tttacaaagaaaa 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 10824 - 10866
Alignment:
Q  281 gtgttatttgaacaaccatttatttgacaacttattggacaac 323  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||    
T  10824 gtgttatttgaacaaccatttagttgacaatttatttgacaac 10866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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