View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1345_high_150 (Length: 326)
Name: NF1345_high_150
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1345_high_150 |
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Alignment Details
Target: chr4 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 34966444 - 34966605
Alignment:
| Q |
93 |
ttcaaaacatggttattccaagacatataaacctcttagttggttgttgagtctcaacaccatctcatgaactaagcacattaggaatttaaaatctttg |
192 |
Q |
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| T |
34966444 |
ttcaaaacatggttattccaagacatataaacctcttagttggttgttgagtctcaacaccatctcatgaactaagcacattaggaatttaaaatctttg |
34966543 |
T |
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| Q |
193 |
gtaactttccaagttatttttgggacttgagacataatttccccaagttttttgctcttcat |
254 |
Q |
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| T |
34966544 |
gtaactttccaagttatttttgggacttgagacataatttccccaagttttttgctcttcat |
34966605 |
T |
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