View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1345_high_168 (Length: 303)

Name: NF1345_high_168
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1345_high_168
NF1345_high_168
[»] chr2 (28 HSPs)
chr2 (3-292)||(452060-452358)
chr2 (3-292)||(4807132-4807436)
chr2 (4-288)||(2610072-2610371)
chr2 (3-286)||(38453058-38453355)
chr2 (4-261)||(8180351-8180623)
chr2 (4-292)||(45368063-45368367)
chr2 (3-216)||(3244089-3244312)
chr2 (3-266)||(11992544-11992822)
chr2 (4-243)||(3865661-3865915)
chr2 (8-292)||(41763484-41763791)
chr2 (12-274)||(24584053-24584330)
chr2 (14-292)||(30743163-30743456)
chr2 (188-292)||(12475059-12475163)
chr2 (4-189)||(13148969-13149156)
chr2 (8-102)||(41197671-41197765)
chr2 (4-138)||(6238193-6238326)
chr2 (53-186)||(17581131-17581262)
chr2 (78-186)||(37281768-37281878)
chr2 (4-70)||(23997394-23997460)
chr2 (71-189)||(33594775-33594895)
chr2 (66-189)||(14769946-14770077)
chr2 (8-51)||(12734502-12734545)
chr2 (9-51)||(16097438-16097480)
chr2 (75-189)||(12904624-12904740)
chr2 (53-138)||(7292697-7292782)
chr2 (212-285)||(7789201-7789274)
chr2 (4-33)||(36183265-36183294)
chr2 (23-189)||(28317402-28317565)
[»] chr4 (43 HSPs)
chr4 (3-292)||(23906739-23907043)
chr4 (3-292)||(435769-436073)
chr4 (3-292)||(48174531-48174835)
chr4 (3-292)||(31960252-31960556)
chr4 (3-286)||(48622965-48623263)
chr4 (3-292)||(1777453-1777757)
chr4 (7-292)||(53707334-53707634)
chr4 (3-292)||(56374830-56375134)
chr4 (3-236)||(33226805-33227053)
chr4 (4-292)||(27450612-27450915)
chr4 (4-189)||(50286627-50286814)
chr4 (7-292)||(39707997-39708298)
chr4 (3-145)||(46583262-46583404)
chr4 (4-233)||(47265641-47265887)
chr4 (4-189)||(16002585-16002771)
chr4 (3-122)||(43433643-43433762)
chr4 (4-189)||(1211829-1212016)
chr4 (23-186)||(17666496-17666658)
chr4 (7-158)||(54914631-54914781)
chr4 (4-138)||(35690019-35690147)
chr4 (37-171)||(3273098-3273232)
chr4 (69-167)||(54787749-54787847)
chr4 (215-292)||(16002454-16002531)
chr4 (67-134)||(41009855-41009922)
chr4 (4-189)||(10775861-10776045)
chr4 (70-171)||(1629107-1629208)
chr4 (62-126)||(45185478-45185542)
chr4 (67-185)||(20917642-20917762)
chr4 (105-185)||(42037521-42037603)
chr4 (114-189)||(30807254-30807331)
chr4 (215-279)||(30852971-30853033)
chr4 (35-189)||(30853072-30853228)
chr4 (4-159)||(55578722-55578874)
chr4 (72-185)||(7092719-7092834)
chr4 (81-189)||(17667845-17667952)
chr4 (218-285)||(35555989-35556056)
chr4 (9-168)||(52280643-52280801)
chr4 (4-42)||(52569954-52569992)
chr4 (4-33)||(1793286-1793315)
chr4 (23-185)||(39754829-39754993)
chr4 (53-137)||(8917815-8917899)
chr4 (72-112)||(22421216-22421256)
chr4 (112-185)||(41427499-41427574)
[»] chr1 (39 HSPs)
chr1 (1-292)||(51601598-51601904)
chr1 (3-292)||(49347831-49348136)
chr1 (3-292)||(43240819-43241123)
chr1 (4-292)||(8671460-8671763)
chr1 (3-292)||(51441203-51441506)
chr1 (3-265)||(1210312-1210589)
chr1 (4-292)||(32083184-32083487)
chr1 (4-166)||(30202569-30202731)
chr1 (7-189)||(27445554-27445738)
chr1 (4-118)||(9592463-9592577)
chr1 (3-189)||(19936177-19936366)
chr1 (4-187)||(34827541-34827726)
chr1 (3-115)||(22089826-22089938)
chr1 (4-189)||(37463306-37463491)
chr1 (55-189)||(32066761-32066894)
chr1 (3-92)||(8391525-8391614)
chr1 (17-189)||(51234271-51234444)
chr1 (72-189)||(7921583-7921702)
chr1 (53-189)||(28528237-28528375)
chr1 (64-186)||(35828892-35829016)
chr1 (66-189)||(52739968-52740092)
chr1 (18-171)||(12807539-12807693)
chr1 (4-138)||(46226721-46226854)
chr1 (75-171)||(6640802-6640898)
chr1 (211-291)||(7814035-7814115)
chr1 (4-102)||(32404967-32405066)
chr1 (9-88)||(9599838-9599917)
chr1 (211-292)||(37463523-37463604)
chr1 (218-291)||(40419222-40419295)
chr1 (3-47)||(696069-696113)
chr1 (66-186)||(52421089-52421209)
chr1 (3-53)||(15085728-15085778)
chr1 (7-160)||(21275588-21275741)
chr1 (3-51)||(39140310-39140358)
chr1 (9-48)||(41560235-41560274)
chr1 (142-189)||(46226889-46226938)
chr1 (211-273)||(46226973-46227035)
chr1 (147-189)||(40419337-40419381)
chr1 (62-138)||(52640922-52640998)
[»] chr7 (31 HSPs)
chr7 (3-292)||(36651534-36651838)
chr7 (1-292)||(46356287-46356593)
chr7 (3-292)||(31004764-31005067)
chr7 (3-292)||(33350244-33350548)
chr7 (7-292)||(37616456-37616756)
chr7 (4-292)||(11593493-11593803)
chr7 (3-292)||(39906813-39907121)
chr7 (4-292)||(38606546-38606848)
chr7 (3-292)||(49028807-49029120)
chr7 (4-292)||(36869728-36870031)
chr7 (3-160)||(35906639-35906796)
chr7 (4-292)||(32630147-32630438)
chr7 (4-274)||(48918946-48919231)
chr7 (3-134)||(43281389-43281520)
chr7 (4-135)||(33072666-33072797)
chr7 (3-108)||(34869159-34869264)
chr7 (84-292)||(24177714-24177937)
chr7 (7-102)||(7272785-7272879)
chr7 (4-84)||(23404181-23404261)
chr7 (3-60)||(12841713-12841770)
chr7 (23-186)||(43793501-43793663)
chr7 (63-159)||(418907-419002)
chr7 (63-167)||(21517823-21517926)
chr7 (22-157)||(23087559-23087694)
chr7 (36-189)||(18637236-18637388)
chr7 (36-189)||(18650671-18650823)
chr7 (246-292)||(38897151-38897197)
chr7 (62-189)||(18608190-18608316)
chr7 (40-103)||(25579549-25579614)
chr7 (35-112)||(33139006-33139083)
chr7 (70-138)||(12965652-12965720)
[»] chr5 (28 HSPs)
chr5 (3-292)||(1274805-1275109)
chr5 (4-287)||(28977296-28977594)
chr5 (3-292)||(10638838-10639141)
chr5 (7-292)||(24178064-24178364)
chr5 (6-292)||(20318531-20318828)
chr5 (3-292)||(1288027-1288331)
chr5 (3-292)||(2075912-2076216)
chr5 (3-254)||(12492825-12493091)
chr5 (1-292)||(3301389-3301695)
chr5 (3-292)||(3394251-3394557)
chr5 (41-233)||(16347879-16348085)
chr5 (3-111)||(34272758-34272866)
chr5 (4-187)||(36200440-36200625)
chr5 (17-189)||(43558266-43558440)
chr5 (4-119)||(27622-27737)
chr5 (64-189)||(27302449-27302573)
chr5 (70-148)||(43423578-43423656)
chr5 (213-279)||(27483-27549)
chr5 (53-137)||(20077305-20077389)
chr5 (4-55)||(16347817-16347868)
chr5 (112-189)||(17341748-17341827)
chr5 (35-189)||(38578974-38579127)
chr5 (23-171)||(3096858-3097000)
chr5 (46-171)||(21915562-21915687)
chr5 (21-110)||(16779419-16779508)
chr5 (75-188)||(6368435-6368550)
chr5 (67-123)||(28676253-28676308)
chr5 (35-111)||(28676330-28676406)
[»] chr3 (27 HSPs)
chr3 (3-292)||(47542149-47542453)
chr3 (3-292)||(51448147-51448451)
chr3 (4-292)||(38849634-38849937)
chr3 (8-292)||(25190919-25191218)
chr3 (3-189)||(28245093-28245281)
chr3 (124-292)||(52138368-52138551)
chr3 (8-189)||(27917228-27917411)
chr3 (8-170)||(54425349-54425511)
chr3 (3-94)||(52138553-52138644)
chr3 (4-189)||(29817161-29817347)
chr3 (142-279)||(9258436-9258584)
chr3 (11-98)||(30345276-30345363)
chr3 (23-185)||(48221444-48221608)
chr3 (4-76)||(5168599-5168671)
chr3 (63-187)||(26489975-26490101)
chr3 (95-189)||(19757724-19757820)
chr3 (3-80)||(53519353-53519430)
chr3 (4-116)||(3186500-3186612)
chr3 (184-292)||(19757524-19757632)
chr3 (211-292)||(19736706-19736787)
chr3 (8-86)||(40674556-40674634)
chr3 (95-189)||(19736822-19736914)
chr3 (74-171)||(44395106-44395200)
chr3 (221-255)||(805519-805553)
chr3 (213-279)||(29817058-29817124)
chr3 (71-189)||(46145809-46145929)
chr3 (26-126)||(50632442-50632542)
[»] chr8 (31 HSPs)
chr8 (3-292)||(36565679-36565983)
chr8 (3-292)||(12492280-12492584)
chr8 (6-292)||(36544692-36544993)
chr8 (3-292)||(42854442-42854755)
chr8 (1-292)||(15215707-15216012)
chr8 (4-258)||(4032933-4033202)
chr8 (3-244)||(8879872-8880128)
chr8 (9-134)||(25439249-25439374)
chr8 (3-103)||(39946601-39946701)
chr8 (4-137)||(18124886-18125018)
chr8 (9-134)||(25299950-25300075)
chr8 (9-134)||(25288613-25288740)
chr8 (4-185)||(13984695-13984877)
chr8 (14-122)||(37077490-37077598)
chr8 (53-188)||(28300596-28300730)
chr8 (11-172)||(6510862-6511025)
chr8 (1-135)||(29735522-29735655)
chr8 (211-292)||(13984170-13984251)
chr8 (4-76)||(2796326-2796398)
chr8 (3-55)||(36395391-36395443)
chr8 (69-167)||(19293784-19293882)
chr8 (53-170)||(33830721-33830838)
chr8 (63-190)||(38667214-38667341)
chr8 (8-134)||(30113640-30113766)
chr8 (53-184)||(25985201-25985334)
chr8 (36-149)||(13589138-13589251)
chr8 (66-189)||(18849628-18849741)
chr8 (23-86)||(10824546-10824609)
chr8 (45-159)||(35601686-35601799)
chr8 (75-129)||(42493812-42493866)
chr8 (71-112)||(30748232-30748273)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-292)||(31008-31312)
[»] scaffold0113 (1 HSPs)
scaffold0113 (7-292)||(12040-12340)
[»] chr6 (17 HSPs)
chr6 (3-292)||(9706316-9706620)
chr6 (4-292)||(5258589-5258892)
chr6 (4-291)||(5631358-5631661)
chr6 (1-292)||(10100293-10100599)
chr6 (3-283)||(20428074-20428370)
chr6 (19-292)||(33495747-33496025)
chr6 (3-188)||(2689313-2689500)
chr6 (3-102)||(607904-608003)
chr6 (4-101)||(30679220-30679317)
chr6 (4-95)||(14030558-14030649)
chr6 (184-292)||(30670428-30670536)
chr6 (4-132)||(6056209-6056337)
chr6 (39-180)||(26291444-26291587)
chr6 (4-102)||(2065195-2065294)
chr6 (36-138)||(6641881-6641983)
chr6 (4-172)||(27790831-27790999)
chr6 (3-86)||(12134339-12134421)
[»] scaffold0570 (1 HSPs)
scaffold0570 (3-240)||(2708-2960)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-189)||(82377-82564)
[»] scaffold1493 (1 HSPs)
scaffold1493 (9-134)||(29-156)
[»] scaffold0045 (2 HSPs)
scaffold0045 (17-160)||(87061-87204)
scaffold0045 (182-285)||(88555-88665)
[»] scaffold0171 (1 HSPs)
scaffold0171 (142-189)||(5848-5897)


Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 452060 - 452358
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  452060 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 452159  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------ctccaaggta 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||       ||||||||||    
T  452160 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaacctccaaggta 452259  T
Q  194 gacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  452260 gacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagtggaatccatacgcttctaaggcttgcctccaggtctct 452358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 4807436 - 4807132
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  4807436 ctgtccgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccatcttgaatacgatg 4807337  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||||||             ||||    
T  4807336 gcttacatctgcttctatttctccgtcattttgtacgaaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctcc 4807237  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  4807236 aaggtagacctacttctccttccactgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaag 4807137  T
Q  288 tctct 292  Q
    |||||    
T  4807136 tctct 4807132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 2610371 - 2610072
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  2610371 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcataaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatgg 2610272  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcca 188  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             |||||    
T  2610271 tttacatctgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcca 2610172  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2610171 aggtagacctacttctccttctgctgaagttacatttcatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggt 2610072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 38453058 - 38453355
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  38453058 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatatgatg 38453157  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||||             ||||    
T  38453158 gcttacatatgcttctatttctccgtcattttgtatgaaggacccaagatatttaaatcgtgtaacttggggtatgatatgatctccaactttcacctcc 38453257  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccag 286  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || ||||||||||    
T  38453258 aaggtaga-ctacttctccttccgctgatgttacattccatatactccgtcttgcttctacttaagcggaatccatacgcttctatggtttgcctccag 38453355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 8180623 - 8180351
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||    
T  8180623 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaactcttgaggctcttctccatttcaaccacccagcttgaatacgatgg 8180524  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttg--gtatgatatgat-------------ctcca 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||  ||||||||||||             |||||    
T  8180523 cttacatctgcttctatttctccgtcattttataagaaggacccaaaatatttaaaccgtgtaacttggagtatgatatgatctccaactttcacctcca 8180424  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatcc 261  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| |||||||| |||||||    
T  8180423 aggtagacctacttctccttccactgaaattacattccatatactctgtcttgcttctactcaagtggaatcc 8180351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 45368063 - 45368367
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||      
T  45368063 tgtccgataaaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataa 45368162  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt-ggtatgatatgat-------------ctccaa 189  Q
     |||||||||||||||||||||| ||||||||||  | |||||||||||||||||||||||||| || |||||||||||||             ||||||    
T  45368163 tttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaatttgggtatgatatgatctccaactttcacctccaa 45368262  T
Q  190 ggtagacc--tacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||   ||||||||||  | |||||||||||||||||||| ||||||||||| |||||| ||| || ||||||||||||||||||||||||||||    
T  45368263 ggtagacccacacttctccttttgttgaagttacattccatataccccgtcttgcttctactcaggcgaaaaccatacgcttctaaggcttgcctccagg 45368362  T
Q  288 tctct 292  Q
    |||||    
T  45368363 tctct 45368367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 3244089 - 3244312
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  3244089 ctgtccgatagaactttcctttcaacataagtggtactttcttatcgcacaaaacacctgaggctcatctccatttctaccacccagcttgaatacgatg 3244188  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatga--------tatgatctccaaggt 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||        | | | |||||||||    
T  3244189 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggatatgatcttcaactttcacctccaaggt 3244288  T
Q  193 agacctacttctccttccgctgaa 216  Q
    ||||||||||||||||||||||||    
T  3244289 agacctacttctccttccgctgaa 3244312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 3 - 266
Target Start/End: Original strand, 11992544 - 11992822
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11992544 ctgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 11992643  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctcc------------- 187  Q
      |||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||  |||||||||||||||||                 
T  11992644 atttacatctgcttctatttctccatcattttgtactatagacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctct 11992743  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacg 266  Q
    |||||||||| ||||||| ||   |||||||||||||||||||||| |||||||||| |||||| |||||| |||||||    
T  11992744 aaggtagacccacttctctttttactgaagttacattccatatacttcgtcttgcttctactcaggcggaaaccatacg 11992822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 3865915 - 3865661
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| |    
T  3865915 tgtccgatagaactttcctttcaacttaagtagtactttcttatcacacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatag 3865816  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgat-------------ctcca 188  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||  |||||||             |||||    
T  3865815 cttacatttgcttctatttctccgtcattttgtacgaaggacccaagttattgaaaccgtgtaacttgggatacaatatgatctccaactttcacctcca 3865716  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgct 243  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  3865715 aggtagacgtacttctccttccgctgaagttacatttcatatactccgtcttgct 3865661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 8 - 292
Target Start/End: Original strand, 41763484 - 41763791
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaa--------ccacccagcttgaatacg 99  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||    
T  41763484 cgatagaactttccttttagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaagttttcaaccacccagcttgaatacg 41763583  T
Q  100 atggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctcc---------- 187  Q
    |||  ||||||||||||||||||||||| |||||||||| | |||||||||||||||||| |||| |||||||  |||||||| ||||||              
T  41763584 atgatttacatctgcttctatttctccgacattttgtactatggacccaagatatttaaatcgtgcaacttggggtatgatataatctccaactttcacc 41763683  T
Q  188 ---aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcc 284  Q
       |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||||||||||    
T  41763684 tccaaggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaaaccatacgctactaaggcttgcctcc 41763783  T
Q  285 aggtctct 292  Q
    ||||||||    
T  41763784 aggtctct 41763791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 12 - 274
Target Start/End: Original strand, 24584053 - 24584330
Alignment:
Q  12 agaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatc 111  Q
    |||||||| ||||||||||||| |||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||| |||    
T  24584053 agaacttttctttcaacttaagtggtattttcttttcgcacaaaacacacgaggctattctccatttccaccacccagcttgaatatgatggcttaaatc 24584152  T
Q  112 tgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctccaaggtagac 196  Q
    ||| | ||||||||| ||||||||||| | |||||||||||||||||||||||||||||  ||| |||||||||             |||||||||||||    
T  24584153 tgcctatatttctccatcattttgtactatggacccaagatatttaaaccgtgtaacttgcggtctgatatgatctccaactttcacctccaaggtagac 24584252  T
Q  197 ctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaag 274  Q
     || ||||||||  ||||||||||||||||||||||||||||||| || |||||||||||||  ||||||||||||||    
T  24584253 ataattctccttttgctgaagttacattccatatactccgtcttgtttctactcaagcggaaatcatacgcttctaag 24584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 292
Target Start/End: Complemental strand, 30743456 - 30743163
Alignment:
Q  14 aactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctg 113  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||| ||||||| ||| ||||||||||||||||  ||| ||||     
T  30743456 aactttcctttcaacttaagtggtactttcttatcacacaaaacacatgaggctcttctcaatttcaatcactcagcttgaatacgatgatttatatcta 30743357  T
Q  114 cttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgat-------------ctccaaggtagacct 198  Q
    ||||||||| ||||||||||||||| |  |||| |||||||||||||||||||||||||  |||| ||||||             ||||||||||||||     
T  30743356 cttctatttatccgtcattttgtactattgacctaagatatttaaaccgtgtaacttgggatatggtatgatctccaactttcacctccaaggtagacca 30743257  T
Q  199 acttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    | ||||||||  |||||||||||||||||||||||| ||||| ||| ||| || |||||| ||||| |||||||||| ||| ||||| ||||||    
T  30743256 atttctccttttgctgaagttacattccatatactctgtctttcttctacccaggcggaaaccatatgcttctaaggtttgtctccaagtctct 30743163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 292
Target Start/End: Original strand, 12475059 - 12475163
Alignment:
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  12475059 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttatactcaagaggaatccatacgcttctaaggcttgcctccagg 12475158  T
Q  288 tctct 292  Q
    |||||    
T  12475159 tctct 12475163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 13149156 - 13148969
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||| ||| || |||||||| ||||| || ||||||||||||||  |  ||||||| || |||||||| ||||||||||| ||| |||||||||||||     
T  13149156 tgtccaatataattttccttttaacttgagtggtactttcttatcatatgaaacacctgaagctcttcttcatttcaaccatccaacttgaatacgatga 13149057  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
     ||  |||| ||||||||||||||||||||||||| | |||||  ||||||||||||||||||||||  |||||||||||||||||||    
T  13149056 tttgtatctacttctatttctccgtcattttgtactatggacctgagatatttaaaccgtgtaacttggggtatgatatgatctccaa 13148969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 41197671 - 41197765
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  41197671 cgatagaactttcctttcagcttaagtggtacttttttatcgcacaaaacacctgagactcttctccatttcaaccacccaacttgaatacgatg 41197765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 6238193 - 6238326
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||| |||| |||||||||||| |||| ||| ||||| ||||||||||  ||||||||||||||||||||||| ||| |||||||||||||     
T  6238193 tgtccgatagaattttcttttcaacttaagtggtatttt-ttatcacacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgatga 6238291  T
Q  104 cttacatctgcttctatttctccgtcattttgtac 138  Q
     |||||| || || |||||||||| ||||||||||    
T  6238292 tttacatatgtttttatttctccgacattttgtac 6238326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 17581262 - 17581131
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagat 152  Q
    |||||||| ||| ||||||||||||| ||||| ||| |||||||| || |  |||||||||||| |||||||  |||||||||||| | | ||||||||     
T  17581262 aaaacacctgagactcttctccatttgaaccatccaacttgaatatgaggatttacatctgcttttatttctttgtcattttgtacaatgaacccaaga- 17581164  T
Q  153 atttaaaccgtgtaacttggtatgatatgatctc 186  Q
    |||||||| ||||||||| |||||||||||||||    
T  17581163 atttaaactgtgtaactt-gtatgatatgatctc 17581131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 37281878 - 37281768
Alignment:
Q  78 tcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtat 175  Q
    ||||||||||| |||||||| ||||  |||||||| ||||||||||||| ||||||| ||| | ||| | ||||||||||||  |||||||||  |||||    
T  37281878 tcaaccacccaacttgaataggatgatttacatctacttctatttctccttcattttatactatggagctaagatatttaaaatgtgtaacttggggtat 37281779  T
Q  176 gatatgatctc 186  Q
    || ||||||||    
T  37281778 gacatgatctc 37281768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 23997460 - 23997394
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctctt 70  Q
    ||||||||||||||||||||||| |||||| |||| ||||| ||||||||||||||| | |||||||    
T  23997460 tgtccgatagaactttcctttcagcttaagtggtattttctcatcgcacaaaacacctggggctctt 23997394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 33594775 - 33594895
Alignment:
Q  71 ctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact- 169  Q
    |||||| |||||||||||| ||||||  ||||  |||||||| |||||||||||||| | |||||||| |   ||| ||||||||||||| |||||| |     
T  33594775 ctccatctcaaccacccagtttgaatttgatgttttacatctccttctatttctccgacgttttgtactatatacctaagatatttaaactgtgtaaatg 33594874  T
Q  170 -tggtatgatatgatctccaa 189  Q
     ||||||||||||| ||||||    
T  33594875 ctggtatgatatgaactccaa 33594895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 14770077 - 14769946
Alignment:
Q  66 ctcttctccatttcaaccaccc-agcttgaatacgat-----ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaa 159  Q
    |||||||||||||||||||||| |||||||||| |||     |  |||||| |||||  ||||||| ||  |||||||| | || || ||||||||||||    
T  14770077 ctcttctccatttcaaccaccccagcttgaatatgatataatgatttacatatgcttgaatttctctgttgttttgtactatggccctaagatatttaaa 14769978  T
Q  160 ccgtgtaact--tggtatgatatgatctccaa 189  Q
    ||||||||||  || |||||||||||||||||    
T  14769977 ccgtgtaacttatgctatgatatgatctccaa 14769946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 12734545 - 12734502
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgca 51  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  12734545 cgatagaactttcctttcaacttaagtggtactttcttgtcgca 12734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 16097438 - 16097480
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatcgca 51  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  16097438 gatagaactttcctttcaacttaagtggtaccttcttatcgca 16097480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 12904740 - 12904624
Alignment:
Q  75 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tgg 172  Q
    |||||||||||| | ||||||| | |||| |||||||| || | | |||||| | ||||||||| |  ||| | | |||||||||||||||||||  ||     
T  12904740 atttcaaccacctaacttgaattctatggtttacatctcctccaacttctccattattttgtactatagacaccatatatttaaaccgtgtaacttgtga 12904641  T
Q  173 tatgatatgatctccaa 189  Q
    |||||||||||||||||    
T  12904640 tatgatatgatctccaa 12904624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 7292782 - 7292697
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtac 138  Q
    |||||||| ||| | || || ||||||||||||||| |||| ||  ||||| |||||||| |||||||| | |||||| |||||||    
T  7292782 aaaacacctgagtcactccttcatttcaaccacccaacttggatttgatggtttacatctccttctattcccccgtcagtttgtac 7292697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 7789201 - 7789274
Alignment:
Q  212 ctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcca 285  Q
    ||||| ||||||| ||||||||  |||||||||||||||| |   ||  ||||||||| |||||||||||||||    
T  7789201 ctgaaattacatttcatatactttgtcttgcttttactcaggtcaaagtcatacgcttataaggcttgcctcca 7789274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 36183294 - 36183265
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaag 33  Q
    ||||||||||||||||||||||||||||||    
T  36183294 tgtccgatagaactttcctttcaacttaag 36183265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 28317565 - 28317402
Alignment:
Q  23 ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctattt 122  Q
    |||||||| || ||| ||||| |||| ||||| | ||  ||||| || |||| |||||||||| ||||||| || | ||||  ||||||| ||||| |||    
T  28317565 ttcaactttagcggtgctttcgtatcacacaatatacatgaggcactcctccgtttcaaccactcagcttggattcaatggtatacatctacttcttttt 28317466  T
Q  123 ctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggtatgatatgatctccaa 189  Q
     ||| ||||||||||| |  || |||| |||| ||||  ||||| ||||   |||||||||||||||    
T  28317465 atccatcattttgtactacagatccaaaatatataaattgtgtaccttg---tgatatgatctccaa 28317402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 23906739 - 23907043
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23906739 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 23906838  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  23906839 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 23906938  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23906939 aaggtagacctacttctccttccgttgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 23907038  T
Q  288 tctct 292  Q
    |||||    
T  23907039 tctct 23907043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 436073 - 435769
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  436073 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccactcagcttgaatacgatg 435974  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
     ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  435973 acttacatctgcttctatttctccgtcattttatacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 435874  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  435873 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcgtgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 435774  T
Q  288 tctct 292  Q
    |||||    
T  435773 tctct 435769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 48174531 - 48174835
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  48174531 ctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacctagcttgaatacgatg 48174630  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  48174631 gcttacatctgcttctatttctccgtcactttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 48174730  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  48174731 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaattcatacgcttctaaggcttgcctccagg 48174830  T
Q  288 tctct 292  Q
    |||||    
T  48174831 tctct 48174835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 31960252 - 31960556
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||    
T  31960252 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacatatgaggctcttctccatttcaaccacccagcttgaatatgatg 31960351  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||             ||||    
T  31960352 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaaattggggtatgatatgatctccaactttcacctcc 31960451  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31960452 aaggtagacctacttctccttccgctgaagttacattccatatactctgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 31960551  T
Q  288 tctct 292  Q
    |||||    
T  31960552 tctct 31960556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 48622965 - 48623263
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  48622965 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggcttttctccatttcaaccacccagcttgaatacgatg 48623064  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatg-------------atctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||||||             | ||||    
T  48623065 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaatcgtgtaatttggggtatgatatgctctccaactttcacctcc 48623164  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccag 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48623165 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccag 48623263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 1777453 - 1777757
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1777453 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 1777552  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
     ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||             ||||    
T  1777553 acttacatttgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaacgtgtaacttggggtatgatatgatttccaactttcacctcc 1777652  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  1777653 aaggtagacctacttctccttccgctgaagttacattccatatactccgtattgcttctactcaagcggaatccatacgcttctaaggtttgcctccagg 1777752  T
Q  288 tctct 292  Q
    |||||    
T  1777753 tctct 1777757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 292
Target Start/End: Complemental strand, 53707634 - 53707334
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctt 106  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  53707634 ccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacatctgagtctcttctccatttcaaccacccagcttgaatacgatggctt 53707535  T
Q  107 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctccaagg 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||             ||||||||    
T  53707534 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttagaccgtgtaacttggggtatgatatgatcttcaactttcacctccaagg 53707435  T
Q  192 tagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 291  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53707434 tagacctacttctccttccactgaagttacattcgatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 53707335  T
Q  292 t 292  Q
    |    
T  53707334 t 53707334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 56375134 - 56374830
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  56375134 ctgtccgatagatctttcctttcaaattaagtggtactttcttatcgcacaaaacacctgaggctcttctcaatttcaaccacccagcttgaatacgatg 56375035  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatg-------------atctcc 187  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||             | ||||    
T  56375034 gcttatatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgctctccaactttcacctcc 56374935  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  56374934 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacacttctaaggcttgcctccagg 56374835  T
Q  288 tctct 292  Q
    |||||    
T  56374834 tctct 56374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 3 - 236
Target Start/End: Complemental strand, 33227053 - 33226805
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||    
T  33227053 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgtacaaaacacctgagactcttctccatttcaaccacccagcttgaatatgatg 33226954  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  33226953 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 33226854  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccg 236  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33226853 aaggtagacctacttgtccttccgctgaagttacattccatatactccg 33226805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 27450612 - 27450915
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| ||||||| |||||||||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||     
T  27450612 tgtctgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatga 27450711  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcca 188  Q
     |||||||||||||||||||||| |||||||| || | ||||||||||||| ||||| |||||||||  |||||||||||||             |||||    
T  27450712 tttacatctgcttctatttctccatcattttgcactatggacccaagatatgtaaactgtgtaacttggggtatgatatgatctccaactttcacctcca 27450811  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
    ||||| ||| ||||||||||  ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  27450812 aggtatacccacttctccttttgctgaagttacattccaaatactccgtcttgcttctactcaagcggaaaccatacgcttctaaggcttgcctcgaggt 27450911  T
Q  289 ctct 292  Q
    ||||    
T  27450912 ctct 27450915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 50286814 - 50286627
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||  | | ||||||| ||||||||||||||||||||||||||||||    
T  50286814 tgtccgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacacatgtgactcttcttcatttcaaccacccagcttgaatacgatgg 50286715  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||||    
T  50286714 cttacatctgcttctatttctccgtcattttgtacgaaggacacaatatatttaaaccgtgtaacttggggtatgatatgatctccaa 50286627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 292
Target Start/End: Complemental strand, 39708298 - 39707997
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaac-acccgaggctcttctccatttcaaccacccagcttgaatacgatggct 105  Q
    ||||||||||||||||||||||||||| |||||||||||||| || ||||| |||  |||||||| ||||||||||||| ||||||||||||||| |  |    
T  39708298 ccgatagaactttcctttcaacttaagtggtactttcttatcacaaaaaaccacctaaggctcttatccatttcaaccatccagcttgaatacgaggatt 39708199  T
Q  106 tacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctccaag 190  Q
    |||| |||||||||||||||||||||||||||| |  ||||||||||||||||||||  ||||||  ||||| |||||||             |||||||    
T  39708198 tacacctgcttctatttctccgtcattttgtactatcgacccaagatatttaaaccgcataacttgaggtataatatgatctccaaatttcacctccaag 39708099  T
Q  191 gtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtct 290  Q
     |||||||| ||||||||  |||||||||| ||||||||||||||||||||||| |||||| || ||| |||||||||||||||||||| | ||| ||||    
T  39708098 atagacctaattctccttttgctgaagttatattccatatactccgtcttgcttctactcaggcagaaaccatacgcttctaaggcttgtcaccatgtct 39707999  T
Q  291 ct 292  Q
    ||    
T  39707998 ct 39707997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 46583262 - 46583404
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||| |||||||||||||||||| ||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  46583262 ctgtccaatagaactttcctttcaaattaagtgatactttcttatcgcacaaaatacctgaggctcttctccatttcaaccacccagcttgaatatgatg 46583361  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggac 145  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46583362 gcttacatctgcttctatttctccgtcattttgtacgaaggac 46583404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 47265641 - 47265887
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtact---ttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacga 100  Q
    |||| |||||||||||| |||||||||||| ||||||   ||||||||||||||||||||  |||||||||| |||||||| ||||||||||||| ||||    
T  47265641 tgtcagatagaactttcatttcaacttaagtggtactactttcttatcgcacaaaacacctaaggctcttcttcatttcaatcacccagcttgaa-acga 47265739  T
Q  101 tggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatg-------------atct 185  Q
    |||||||||| ||||||||||||||||||||||| ||| | ||| |||||||||||||||  ||||||||  |||||||||||             | ||    
T  47265740 tggcttacatttgcttctatttctccgtcattttatactatggatccaagatatttaaactatgtaacttggggtatgatatgacctccaactttcacct 47265839  T
Q  186 ccaaggtagacctacttctccttccgctgaagttacattccatatact 233  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  47265840 ccaaggtagacctacttctccttttgctgaagttacatttcatatact 47265887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 16002771 - 16002585
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| |||| |||||| |||| |||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||| |||||||||     
T  16002771 tgtctgataaaacttttctttgaacttaagtggtactttcttatcacacaaaacacctgaggctcttctcaatttcaaccactcagcttaaatacgatga 16002672  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
     |||||||||||||||| ||||||||||||||||| | ||| ||||||| |||||||||||||| ||  ||||||||||||| |||||    
T  16002671 tttacatctgcttctatgtctccgtcattttgtactatggaaccaagat-tttaaaccgtgtaatttggggtatgatatgatttccaa 16002585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 43433762 - 43433643
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  43433762 ctgtccgatagaactttcctttcaacttaagtgacactttcttatcgcacaaaacacctgaggctcttctccatttcaatcacccagcttgaatacgatg 43433663  T
Q  103 gcttacatctgcttctattt 122  Q
    | ||||||||||||||||||    
T  43433662 gtttacatctgcttctattt 43433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 1211829 - 1212016
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| |||| |||||||||  ||||||||   ||||||||||||||||||||| ||| | |||||||||||||     
T  1211829 tgtccgatagaactttcctttcaacttaagtggtattttcttatcatacaaaacatttgaggctcttctccatttcaactacctaacttgaatacgatga 1211928  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
     ||||| ||||||||||||||| || ||||||||| | |||| ||||||||||||||  |||||| |  |||||||||||||||||||    
T  1211929 tttacacctgcttctatttctctgttattttgtactatggacacaagatatttaaactatgtaacgtaaggtatgatatgatctccaa 1212016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 17666496 - 17666658
Alignment:
Q  23 ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctattt 122  Q
    |||||||||| |||||| ||  |||| || |||||||  || |||||||||||||||||| | ||| |||||||||||||  |||||| ||||| |||||    
T  17666496 ttcaacttaaagggtacgtttgtatcacataaaacacatgatgctcttctccatttcaacaatccaacttgaatacgatgatttacatttgcttttattt 17666595  T
Q  123 ctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggtatgatatgatctc 186  Q
    || || ||||||||||   | ||||||||||||||||| ||||||||| |||||||||||||||    
T  17666596 cttcgacattttgtactttgaacccaagatatttaaactgtgtaactt-gtatgatatgatctc 17666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 54914631 - 54914781
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctt 106  Q
    ||||||||| ||||||||||||||||| |||| ||||||||| || |||||| || | ||| |||||||||||||||||     |||||||| | |  ||    
T  54914631 ccgatagaattttcctttcaacttaagtggtattttcttatcacataaaaca-ccaaagcttttctccatttcaaccacatgatttgaatacaaggattt 54914729  T
Q  107 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaa 158  Q
    ||||||| |||||||||||| ||||||| ||| | |||||||||||||||||    
T  54914730 acatctgtttctatttctccatcattttataccatggacccaagatatttaa 54914781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 35690147 - 35690019
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| ||||||| |||||| |||||||||  || ||||||||||| || ||||||||||   ||||||||||||||||||||||| |||||||||||||     
T  35690147 tgtctgatagaattttcctctcaacttaaacggcactttcttatcacataaaacacccgca-ctcttctccatttcaaccacccaacttgaatacgatga 35690049  T
Q  104 cttacatctgcttctatttctccgtcattttgtac 138  Q
     |||||     ||||||||||||| ||||||||||    
T  35690048 tttaca-----ttctatttctccggcattttgtac 35690019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 3273232 - 3273098
Alignment:
Q  37 tactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgt 136  Q
    ||||||| |||| || ||||||   ||||||| ||||||||||||||| ||| ||||||| |||||| ||| || |||||||||||||  ||| ||||||    
T  3273232 tactttcgtatcacataaaacaaatgaggctcatctccatttcaaccatccaacttgaattcgatggtttatatttgcttctatttctttgtcgttttgt 3273133  T
Q  137 acgaaggacccaagatatttaaaccgtgtaacttg 171  Q
    || | ||||| ||||| ||||||  ||||||||||    
T  3273132 actatggacctaagatgtttaaattgtgtaacttg 3273098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 54787749 - 54787847
Alignment:
Q  69 ttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaa 167  Q
    |||||||||||||||||||| ||| ||||||||   |||||||||||| | |||||| || |||||||||   ||||| ||||||||||||||||||||    
T  54787749 ttctccatttcaaccacccaacttaaatacgattatttacatctgcttttttttctctgtgattttgtactctggaccaaagatatttaaaccgtgtaa 54787847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 16002531 - 16002454
Alignment:
Q  215 aagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    |||||| ||||||||||||  ||||||||| |||||||||| || |||||||||||||||||||| ||| ||||||||    
T  16002531 aagttatattccatatactttgtcttgcttctactcaagcgcaaaccatacgcttctaaggcttgtctctaggtctct 16002454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 41009855 - 41009922
Alignment:
Q  67 tcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcatttt 134  Q
    |||||||||||||||||||| | ||||||||||| |  |||||| |||||||||||||||||||||||    
T  41009855 tcttctccatttcaaccacctaacttgaatacgaagatttacatttgcttctatttctccgtcatttt 41009922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 10775861 - 10776045
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||| ||| || ||||| |||||||| |||||| |||||  ||| || ||||||    |||| || ||||||||||||||||||  |||||| | ||||    
T  10775861 tgtccaataaaattttcccttcaacttgaggggtgctttcgcatcacataaaacaagtaaggcactcctccatttcaaccacccattttgaattctatgg 10775960  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
     ||||||||   |  | |||||| ||||||||||  |  ||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  10775961 tttacatct---taaacttctccatcattttgtattatagacccaagatatttaaaccatgtaacttgtggtatgatatgatctccaa 10776045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 1629208 - 1629107
Alignment:
Q  70 tctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact 169  Q
    |||||||||||||||| ||  ||||||||||||  |||||||||||||||||||||| || |||| ||| | | |  ||||||||||||||  |||||||    
T  1629208 tctccatttcaaccactcaagttgaatacgatgatttacatctgcttctatttctccatcgttttatactatgaattcaagatatttaaactatgtaact 1629109  T
Q  170 tg 171  Q
    ||    
T  1629108 tg 1629107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 45185478 - 45185542
Alignment:
Q  62 gaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctcc 126  Q
    ||||||||||||| ||||||||||  ||||||||||| |||  ||||||||||||||||||||||    
T  45185478 gaggctcttctccctttcaaccactaagcttgaatacaatgatttacatctgcttctatttctcc 45185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 20917762 - 20917642
Alignment:
Q  67 tcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgta 166  Q
    |||||||||||| ||||| | || |||||| ||||| ||||||| || ||||||||||||||  |||| ||| | ||| |   ||||||||||| |||||    
T  20917762 tcttctccattttaaccatctagattgaattcgatgacttacatatgtttctatttctccgttgttttatactatggagctcggatatttaaactgtgta 20917663  T
Q  167 act--tggtatgatatgatct 185  Q
    |||  ||||||||||||||||    
T  20917662 acttatggtatgatatgatct 20917642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 42037603 - 42037521
Alignment:
Q  105 ttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatct 185  Q
    |||||||| ||| |||||||| |||||||||||| |  ||  |||||||||||||||||||||||  ||| ||||||||||||    
T  42037603 ttacatctccttatatttctcagtcattttgtactatagattcaagatatttaaaccgtgtaacttgtgggatgatatgatct 42037521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 30807331 - 30807254
Alignment:
Q  114 cttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    |||||||||||| |||||||||||| |  ||| | | | |||||||||||||||||  ||||||||||||||||||||    
T  30807331 cttctatttctcagtcattttgtactatagactccaaacatttaaaccgtgtaacttgtggtatgatatgatctccaa 30807254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 30853033 - 30852971
Alignment:
Q  215 aagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttg 279  Q
    ||||||||||||||||| ||  |||||||| |||||| |||||| ||||| ||||||||||||||    
T  30853033 aagttacattccatataatc--tcttgcttctactcaggcggaagccatatgcttctaaggcttg 30852971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 189
Target Start/End: Complemental strand, 30853228 - 30853072
Alignment:
Q  35 ggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcatttt 134  Q
    ||||||||  |||| || |||||||| ||||| ||  |||||||||| |||||  |||||||  |||||||   ||||  || |||||||| |||  |||    
T  30853228 ggtacttttgtatcacataaaacacctgaggccctcttccatttcaatcaccccacttgaatttgatggctgttatctctttttatttctctgtcgcttt 30853129  T
Q  135 gtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    |||| | ||||||||||||||||||| ||||| ||  |||||||| ||| |||||||    
T  30853128 gtactatggacccaagatatttaaactgtgtagcttgtggtatgacatgttctccaa 30853072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 55578874 - 55578722
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||| ||||||| ||||||||| |  |   | ||||| || |||||| | || | |||||||||||| ||||||| | ||| |||||||||     
T  55578874 tgtccgatagaattttccttccaacttaagcgaca---tgttatcacataaaacatctgaagatcttctccattttaaccacctaacttaaatacgatga 55578778  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaa 159  Q
     |||  | |||||||||||||| |||||||| ||| |  || ||||||||||||||    
T  55578777 tttatgtatgcttctatttctcagtcattttatactatagatccaagatatttaaa 55578722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 7092719 - 7092834
Alignment:
Q  72 tccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt- 170  Q
    ||||||||||||||||| ||||||||  |||   ||||||||| ||||||| | ||| ||||| ||| |  ||||||  ||||||||||||||||| ||     
T  7092719 tccatttcaaccacccaacttgaataatatgatgtacatctgcatctatttattcgttattttatactatagacccacaatatttaaaccgtgtaattta 7092818  T
Q  171 -ggtatgatatgatct 185  Q
     | |||||||||||||    
T  7092819 agatatgatatgatct 7092834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 17667845 - 17667952
Alignment:
Q  81 accacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggtatgatat 180  Q
    |||| ||| |||||||||||||  |||||| ||| | |||||||  |||||||||||| | | |||||| ||||||||||  | |||||| |||||||||    
T  17667845 accatccaacttgaatacgatgatttacatttgcgtttatttctaagtcattttgtactatgaacccaatatatttaaactatataactt-gtatgatat 17667943  T
Q  181 gatctccaa 189  Q
    ||| |||||    
T  17667944 gatatccaa 17667952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 35555989 - 35556056
Alignment:
Q  218 ttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcca 285  Q
    ||||||||||||| ||| ||||||||| |||||||| | || ||||| | |||||||||||| |||||    
T  35555989 ttacattccatatgctctgtcttgcttctactcaagtgaaaaccatatgtttctaaggcttgtctcca 35556056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 52280643 - 52280801
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttac 108  Q
    ||||||| ||||||| ||||||  | ||||||||| || | | |||||||  |||| | |||||||||||||||||| || | ||||||||||   ||||    
T  52280643 gatagaattttcctt-caacttgggcggtactttcataccacgcaaaacatgcgagacccttctccatttcaaccacacaacgtgaatacgattatttac 52280741  T
Q  109 atctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaac 168  Q
    |  ||||||  ||||||| | |||||||||    ||||||| ||||||||| ||||||||    
T  52280742 acttgcttcagtttctcctttattttgtactttagacccaaaatatttaaatcgtgtaac 52280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 52569954 - 52569992
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtacttt 42  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  52569954 tgtccaatagaactttcctttcaacttaagtggtacttt 52569992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 1793315 - 1793286
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaag 33  Q
    ||||||||||||||||||||||||||||||    
T  1793315 tgtccgatagaactttcctttcaacttaag 1793286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 39754829 - 39754993
Alignment:
Q  23 ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctattt 122  Q
    ||||||||||| |||| ||||  ||| || |||||||  ||||| ||  | ||||||||||||  | |||| || | |||  |||||||| |||||||||    
T  39754829 ttcaacttaagtggtattttcgcatcacataaaacacttgaggcactggttcatttcaaccactaaacttggattcaatgatttacatctccttctattt 39754928  T
Q  123 ctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatct 185  Q
    ||  ||| |||||||| |  |||||| ||||||||||  |||| |||  ||||||||||||||||    
T  39754929 ctttgtcgttttgtactatagacccatgatatttaaagtgtgtgacttgtggtatgatatgatct 39754993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 8917815 - 8917899
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgta 137  Q
    |||||||  |||||||||||| |||||||  | ||| |||||| ||||||  |||  ||||||| |||||||| |||||||||||    
T  8917815 aaaacacttgaggctcttctcaatttcaattatccaacttgaaaacgatgatttatgtctgcttttatttctctgtcattttgta 8917899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 22421216 - 22421256
Alignment:
Q  72 tccatttcaaccacccagcttgaatacgatggcttacatct 112  Q
    ||||||||||||||||||||||||| | |||| ||||||||    
T  22421216 tccatttcaaccacccagcttgaattcaatggtttacatct 22421256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 41427574 - 41427499
Alignment:
Q  112 tgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatct 185  Q
    ||||| ||||||||||||||| ||||| | |  | ||||||||||||  ||||||||||  |||||||||||||||    
T  41427574 tgcttatatttctccgtcattctgtactatgagcacaagatatttaagtcgtgtaacttggggtatgatatgatct 41427499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 51601904 - 51601598
Alignment:
Q  1 tactgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacga 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||||||||||    
T  51601904 tactgtccgatagaactttcatttcaacttaaggggtactttcttatcgaacaaaacacctgagactcttctctatttccaccacccagcttgaatacga 51601805  T
Q  101 tggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||    
T  51601804 tggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 51601705  T
Q  186 ccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcca 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51601704 ccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcca 51601605  T
Q  286 ggtctct 292  Q
    |||||||    
T  51601604 ggtctct 51601598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 49347831 - 49348136
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49347831 ctgtccgatagatttttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 49347930  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaacc-gtgtaactt--ggtatgatatgat-------------ctc 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||             |||    
T  49347931 gcttacacctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccagtgtaacttggggtatgatatgatctccaactttcacctc 49348030  T
Q  187 caaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccag 286  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  49348031 caaggtagacctacttctccttccgctgaagttacattcgatatactccgtcttgcttctactcaagcagaatccatacgcttctaaggcttgcctccag 49348130  T
Q  287 gtctct 292  Q
    ||||||    
T  49348131 gtctct 49348136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 43240819 - 43241123
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  43240819 ctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatg 43240918  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||             ||||    
T  43240919 gcttacatctgcttccatttctccgtcattttgtacgaaggatccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 43241018  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  43241019 aaggtagatctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagtggaatccatacgcttctaaggcttacctccagg 43241118  T
Q  288 tctct 292  Q
    |||||    
T  43241119 tctct 43241123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 4 - 292
Target Start/End: Complemental strand, 8671763 - 8671460
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||     
T  8671763 tgtctgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgagtctcttctccattttaaccacccagcttgaatacgatga 8671664  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcca 188  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             |||||    
T  8671663 cttacatctgcttctatttcttcgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttagggtatgatatgatctccaactttcacctcca 8671564  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  8671563 aggtagacctacttctccttctgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaagt 8671464  T
Q  289 ctct 292  Q
    ||||    
T  8671463 ctct 8671460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 51441203 - 51441506
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  51441203 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgca-aaaacacttgaggctcttctccatttcaaccacccagcttgaatatgatg 51441301  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctc-------------c 187  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||||||             |    
T  51441302 gcttagatctgcttctatttctccgtcattttgtatgaaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcaccttc 51441401  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  51441402 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatactcttctaaggcttgcctccagg 51441501  T
Q  288 tctct 292  Q
    |||||    
T  51441502 tctct 51441506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 265
Target Start/End: Complemental strand, 1210589 - 1210312
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  1210589 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctcaggctcttcttcatttcaaccacccagcttgaatacgatg 1210490  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||||||||  |||||||||||||             ||||    
T  1210489 gcttacatctgcttttatttctccatcattttgtacgaaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctcc 1210390  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatac 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1210389 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatac 1210312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 32083184 - 32083487
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||     
T  32083184 tgtctgatagaactttcctttcagcttaagtggtactttcttatcgcatagaacacctgaggctcttctccatttcaaccacccagcttgaatacgatga 32083283  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcca 188  Q
     |||||| ||| ||||||||||||||||||||||| | ||||||||||||||||||  ||| |||||  |||||||||||||             |||||    
T  32083284 tttacatttgcctctatttctccgtcattttgtactatggacccaagatatttaaattgtgcaacttggggtatgatatgatctccaactttcacctcca 32083383  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||    
T  32083384 aggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaaaccatacgcttctgaggcttgcctccaggt 32083483  T
Q  289 ctct 292  Q
    ||||    
T  32083484 ctct 32083487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 30202569 - 30202731
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  30202569 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccggcttgaatacgatgg 30202668  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgta 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30202669 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgta 30202731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 27445738 - 27445554
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctt 106  Q
    ||||||||||||||||||||| ||||| |||||||||||||| || ||||||| ||   ||||||||||||||||||| ||| |||||||||||||  ||    
T  27445738 ccgatagaactttcctttcaatttaagtggtactttcttatcacataaaacactcggaactcttctccatttcaaccaaccaacttgaatacgatgattt 27445639  T
Q  107 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
    |||||||||||||||||||| ||||||||||| | |||||||| ||| ||||||||||||||||  ||||||||| |||||||||    
T  27445638 acatctgcttctatttctccatcattttgtactatggacccaacataattaaaccgtgtaacttggggtatgataagatctccaa 27445554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 9592577 - 9592463
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  9592577 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgagactcttctccatttcaaccacccaacttgaatacgatgg 9592478  T
Q  104 cttacatctgcttct 118  Q
    ||||| |||||||||    
T  9592477 cttacctctgcttct 9592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 189
Target Start/End: Complemental strand, 19936366 - 19936177
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||| || ||||||||||  ||||| |||||||||||||| || |||||||  |||| |||| |||||||||||||||||||||||||||||||    
T  19936366 ctgtccgatataattttcctttcattttaagcggtactttcttatcacataaaacacttgaggttcttatccatttcaaccacccagcttgaatacgatg 19936267  T
Q  103 gcttacatctgcttctatttctccgtca-ttttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
      |||||| ||||||||||||||| ||| |||||||  | |||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  19936266 atttacatatgcttctatttctccttcatttttgtattatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaa 19936177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 34827541 - 34827726
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||| ||| || ||||||||||| |||||  ||||||||||||| || |||||||  |||||||||||||||||||||||  || ||||||||| |||     
T  34827541 tgtccaatataattttcctttcaatttaagcagtactttcttatcacataaaacacatgaggctcttctccatttcaaccattcaacttgaatacaatga 34827640  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctcc 187  Q
     |||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||  |||||||||||||||||    
T  34827641 tttacatatgcttctatttctccgtcattttgtactatggacccaagatatttaaaccttgtaacttagggtatgatatgatctcc 34827726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 22089938 - 22089826
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| |||||||||| | ||| |||||||||||||||||||||||||||||||||||||    
T  22089938 ctgtccgatagaactttcctttcaacttaagtggtattttcttattgcacaaaacatctgagactcttctccatttcaaccacccagcttgaatacgatg 22089839  T
Q  103 gcttacatctgct 115  Q
     ||||||||||||    
T  22089838 acttacatctgct 22089826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 37463306 - 37463491
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| ||||||| ||||||||||||||||   || ||||||||||  ||  ||||||  |||||||||||||| ||||||||| ||||| ||||| |||     
T  37463306 tgtctgatagaattttcctttcaacttaatcagtgctttcttatc--acctaacacctaaggctcttctccatatcaaccacctagcttaaatacaatga 37463403  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttg--gtatgatatgatctccaa 189  Q
      ||||||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||| |  ||||||||||||||||||    
T  37463404 tatacatctgcttctatttctccgtcattttgtactatggactcaagatatttaaactgtgtaactcggagtatgatatgatctccaa 37463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 32066761 - 32066894
Alignment:
Q  55 aacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatat 154  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||||  |||||| ||||| |||||||| |||||||||||| | | |||||| ||||    
T  32066761 aacacctgaggctcttctccattttaaccatccaacttgaatacgatgatttacatttgcttttatttctctgtcattttgtactatgaacccaaaatat 32066860  T
Q  155 ttaaaccgtgtaacttggtatgatatgatctccaa 189  Q
    |||||| ||||||||| ||||||||||||||||||    
T  32066861 ttaaactgtgtaactt-gtatgatatgatctccaa 32066894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 8391614 - 8391525
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagctt 92  Q
    |||||||||| ||| ||||||| | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8391614 ctgtccgataaaacattcctttaagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagctt 8391525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 51234444 - 51234271
Alignment:
Q  17 tttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgctt 116  Q
    ||||| |||||||| || ||| ||||| |||| || |||| ||| |||||| |||||||||||||||||||| |||||||  ||||  ||||||||||||    
T  51234444 tttcccttcaacttgagcggtgctttcgtatcacataaaagacctgaggctattctccatttcaaccacccaacttgaatttgatgatttacatctgctt 51234345  T
Q  117 ctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttg-gtatgatatgatctccaa 189  Q
    | |||||||| |||||||| || | |||| ||||||||||||||  || ||||||  |||||||||||||||||    
T  51234344 caatttctccatcattttgcactatggactcaagatatttaaactatgaaacttgtttatgatatgatctccaa 51234271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 7921702 - 7921583
Alignment:
Q  72 tccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact-- 169  Q
    ||||||||||| ||||| ||||||| |||||| |||||||| ||||||||||||  || |||||||| | ||| ||||||||| |||| |||||||||      
T  7921702 tccatttcaacaacccaacttgaattcgatggtttacatctccttctatttctcaatcgttttgtactatggatccaagatatataaatcgtgtaacttg 7921603  T
Q  170 tggtatgatatgatctccaa 189  Q
    ||||| ||||||||||||||    
T  7921602 tggtaagatatgatctccaa 7921583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 28528375 - 28528237
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagat 152  Q
    |||||||| ||||| || ||| ||||||||||||||||| | || |||||| ||||| || ||||||||||||| |  |||||||  |  ||||||||||    
T  28528375 aaaacacctgaggcactcctcaatttcaaccacccagctcggattcgatggtttacacctccttctatttctccattgttttgtaacatagacccaagat 28528276  T
Q  153 atttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    |||||||| ||||||||  ||||||| ||||||||||||    
T  28528275 atttaaactgtgtaacttgtggtatgctatgatctccaa 28528237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 35828892 - 35829016
Alignment:
Q  64 ggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgt 163  Q
    ||||||| |||||||||||||| ||| | |||| |||||  |||||| ||||||||||||||||||  ||||||| | ||||||||||| ||||| | |     
T  35828892 ggctcttttccatttcaaccacacagatcgaattcgatgatttacatatgcttctatttctccgtcgctttgtactatggacccaagatgtttaagcagc 35828991  T
Q  164 gtaact--tggtatgatatgatctc 186  Q
    ||||||  |||||||||||||||||    
T  35828992 gtaacttgtggtatgatatgatctc 35829016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 52739968 - 52740092
Alignment:
Q  66 ctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgt 165  Q
    ||||||||||||||||||| ||| ||||| || |||| ||||||||| ||||||||||||||||| ||||||| |  |  |||| ||||| ||||||||     
T  52739968 ctcttctccatttcaaccatccaacttgagtaagatgacttacatctacttctatttctccgtcactttgtactataggtccaaaatattcaaaccgtgc 52740067  T
Q  166 aactt-ggtatgatatgatctccaa 189  Q
    |||||  | ||||||||||||||||    
T  52740068 aacttaagcatgatatgatctccaa 52740092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 12807539 - 12807693
Alignment:
Q  18 ttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaa-ccacccagcttgaatacgatggcttacatctgctt 116  Q
    ||||||||||||| || ||||||||| |||| || || |||   |||||||||||||||||||| ||||| ||  | ||| |||||  ||||||| ||||    
T  12807539 ttcctttcaacttgagtggtactttcatatcacataagacattagaggctcttctccatttcaaaccacctagaataaattcgatgatttacatcagctt 12807638  T
Q  117 ctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttg 171  Q
    |||||||| |||| |||| ||| | ||| ||||||||||||||  ||||||||||    
T  12807639 ctatttcttcgtcgttttatactatggatccaagatatttaaattgtgtaacttg 12807693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 46226721 - 46226854
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| ||||||| ||| |||||||||||||   |||||||||| | || |||||||  || |||||||||||||||||||| ||| ||||||||| ||      
T  46226721 tgtctgatagaatttttctttcaacttaagcactactttcttagcacataaaacacttgatgctcttctccatttcaaccatccaacttgaatacaat-a 46226819  T
Q  104 cttacatctgcttctatttctccgtcattttgtac 138  Q
     |||||||||||| | ||||||| |||||||||||    
T  46226820 tttacatctgcttttgtttctccatcattttgtac 46226854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 6640898 - 6640802
Alignment:
Q  75 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttg 171  Q
    |||||||||||||| |||| || | |||| ||||| || ||||||||||||| | ||||||||| |  ||| |||||||||||||||||||||||||    
T  6640898 atttcaaccacccaacttggatccaatggtttacacctccttctatttctccataattttgtactatagactcaagatatttaaaccgtgtaacttg 6640802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 7814115 - 7814035
Alignment:
Q  211 gctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 291  Q
    |||||| ||||||| ||||||||| ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||| |||||    
T  7814115 gctgaaattacatttcatatactctgtcttgcttctactcaagcggaagccatacacttataaggcttgtctccaagtctc 7814035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 32404967 - 32405066
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaa-cacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||| ||||| |||||||| || ||| ||||| ||||||| |||| |||||||||||| | ||||||||||||||| || ||||||| ||||    
T  32404967 tgtccgatagaattttcccttcaacttgagtggtcctttcgtatcgcataaaaacacccgaggctcgtatccatttcaaccacctagattgaatatgatg 32405066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 9599838 - 9599917
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccaccca 88  Q
    ||||||| |||| |||||||| ||| |||||||||||||| || |||||||  ||||||||| ||||||| |||||||||    
T  9599838 gatagaattttcatttcaactgaagcggtactttcttatcacataaaacacttgaggctcttatccatttaaaccaccca 9599917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 37463523 - 37463604
Alignment:
Q  211 gctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    |||||||||||||||||||||||| |||||| || |||  |||| ||| |||||| ||||||||||||| ||| | ||||||    
T  37463523 gctgaagttacattccatatactctgtcttgtttctacaaaagcagaagccatacacttctaaggcttgtctcaaagtctct 37463604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 40419295 - 40419222
Alignment:
Q  218 ttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 291  Q
    ||||||||||||||||  ||| ||||| ||||| |||| |||||||||| |||||||||||  |||||||||||    
T  40419295 ttacattccatatactatgtcgtgcttctactcgagcgaaatccatacgtttctaaggcttatctccaggtctc 40419222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 696113 - 696069
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttat 47  Q
    |||||||||||||||||||||||| |||||| |||||||||||||    
T  696113 ctgtccgatagaactttcctttcagcttaagtggtactttcttat 696069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 52421209 - 52421089
Alignment:
Q  66 ctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgt 165  Q
    |||||||| |||||||||||||| ||||||| |||||  | |||| ||||| |||||||  ||| |||||||| || |||||||| |||||||| | |||    
T  52421209 ctcttctctatttcaaccacccaacttgaattcgatgattaacatatgcttttatttctatgtc-ttttgtactaaagacccaagctatttaaa-cttgt 52421112  T
Q  166 aact--tggtatgatatgatctc 186  Q
    ||||  ||| |||||||||||||    
T  52421111 aacttgtggcatgatatgatctc 52421089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 15085778 - 15085728
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcaca 53  Q
    ||||| |||||||||||||||||| |||||| ||| |||||||||||||||    
T  15085778 ctgtctgatagaactttcctttcagcttaagtggtgctttcttatcgcaca 15085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 21275741 - 21275588
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctt 106  Q
    |||||| || ||||| |||| |||||| ||||||||||||||  | ||| |||  ||| |||||||  ||||||||||| ||||||| || | |||  ||    
T  21275741 ccgataaaattttcccttcagcttaagtggtactttcttatcaaataaagcacatgagactcttctttatttcaaccactcagcttggattcaatgattt 21275642  T
Q  107 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaac 160  Q
    |||||  ||| ||| |||| ||| ||||| || |  ||||||||||||||||||    
T  21275641 acatcaacttttatatctctgtcgttttgcactatcgacccaagatatttaaac 21275588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 39140358 - 39140310
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgca 51  Q
    ||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  39140358 ctgtccgatagaatttgcctttcaatttaagcggtactttcttatcgca 39140310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 41560274 - 41560235
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatc 48  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  41560274 gatagaattttcctttcaacttaagcggtactttcttatc 41560235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 46226889 - 46226938
Alignment:
Q  142 ggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    ||||||||||||||||||||||||||||   |||||| ||||||||||||    
T  46226889 ggacccaagatatttaaaccgtgtaactcaaggtatggtatgatctccaa 46226938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 46226973 - 46227035
Alignment:
Q  211 gctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaa 273  Q
    |||||||||||||| |||| |||  || |||||| |||||| |||||| ||||||||||||||    
T  46226973 gctgaagttacatttcataaactttgttttgcttctactcaggcggaaaccatacgcttctaa 46227035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 40419381 - 40419337
Alignment:
Q  147 caagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||    
T  40419381 caagatatttaaactgtgtaacttgtggtatgatatgatctccaa 40419337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 52640922 - 52640998
Alignment:
Q  62 gaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtac 138  Q
    ||||||||||| ||||||||| |  || ||||||||||||   |||||| ||||| ||| |||| ||||||||||||    
T  52640922 gaggctcttcttcatttcaacaattcaacttgaatacgataatttacatatgcttttatctctctgtcattttgtac 52640998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 36651838 - 36651534
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36651838 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 36651739  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||             ||||    
T  36651738 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgcgtaacttggggtatgatatgatctccaactttcacctcc 36651639  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36651638 aaggtagacctacttcttcttccgctgaagttccattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 36651539  T
Q  288 tctct 292  Q
    |||||    
T  36651538 tctct 36651534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 46356287 - 46356593
Alignment:
Q  1 tactgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacga 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  46356287 tactgtccgatagaactttcctttcaacttaagtagtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacga 46356386  T
Q  101 tggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ct 185  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||             ||    
T  46356387 tggcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 46356486  T
Q  186 ccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcca 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  46356487 ccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggtatccatacgcttctaaggcttgcctcca 46356586  T
Q  286 ggtctct 292  Q
    |||||||    
T  46356587 ggtctct 46356593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 31005067 - 31004764
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  31005067 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacgatg 31004968  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||             ||||    
T  31004967 gcttacatctgcttctatttctccgtcattttgtacgaaggagccaagatatttaaa-cgtgtaacttggggtatgatatgatctccaactttcacctcc 31004869  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31004868 aaggtagacctacttctccttccgctgaagtaacattccatatactctgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 31004769  T
Q  288 tctct 292  Q
    |||||    
T  31004768 tctct 31004764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 33350244 - 33350548
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  33350244 ctgtccgatagaactttcctgtcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatg 33350343  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||             ||||    
T  33350344 gcttacatctgcttctatttctccgtcattttgtacgaaagaccctagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 33350443  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33350444 aaggtagacctacttcttcttccgctgaagttacattccatatacttcgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 33350543  T
Q  288 tctct 292  Q
    |||||    
T  33350544 tctct 33350548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 292
Target Start/End: Complemental strand, 37616756 - 37616456
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctt 106  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  37616756 ccgatataactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacaatggctt 37616657  T
Q  107 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctccaagg 191  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||||||||             ||||||||    
T  37616656 acatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaatcgtgtaacttggggtatgatatgatctccacctttcacctccaagg 37616557  T
Q  192 tagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 291  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37616556 tagacctacttctccttctgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 37616457  T
Q  292 t 292  Q
    |    
T  37616456 t 37616456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 292
Target Start/End: Complemental strand, 11593803 - 11593493
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11593803 tgtccgatagaactttcctttcaacttaagtggtacttttttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgg 11593704  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcca 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||             |||||    
T  11593703 cttacatctgcttctatttctccatcattttgtacgaaggacccaagatatttaaaccgtctaacttggggtatgatatgatcttcaactttcacctcca 11593604  T
Q  189 aggtagacctacttctcc-ttccgctgaagttacattccatata------ctccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcc 281  Q
    |||||||||||||||||| |||||||||||||||||| ||||||      ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  11593603 aggtagacctacttctcctttccgctgaagttacatttcatatactccgtctccgtcttgcttctactcaagcggaatccatacgcttctaagacttgcc 11593504  T
Q  282 tccaggtctct 292  Q
    |||||||||||    
T  11593503 tccaggtctct 11593493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 39906813 - 39907121
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaac----cacccagcttgaatac 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||    ||||||||||||||||    
T  39906813 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacatctgaggctcttctccatttcaaccaaccacccagcttgaatac 39906912  T
Q  99 gatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgat------------- 183  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||||||                 
T  39906913 gatggcttgcatctacttctatttctccgtcattttgtacgaatgacccaagatatttaaaccgtgtaacatgggatatgatatgatctccaactttcac 39907012  T
Q  184 ctccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctc 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||    
T  39907013 ctccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatatgcttctaagatttgcctc 39907112  T
Q  284 caggtctct 292  Q
    |||||||||    
T  39907113 caggtctct 39907121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 4 - 292
Target Start/End: Complemental strand, 38606848 - 38606546
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  38606848 tgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgatgg 38606749  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctc------------caa 189  Q
     |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||            |||    
T  38606748 tttacatctgcttctatttcttcgtcattttgtactatggacccaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcacctcaa 38606649  T
Q  190 ggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtc 289  Q
    |||||||| ||||||||||  ||  || ||||||||||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||||||||    
T  38606648 ggtagacccacttctccttttgcaaaaattacattccatatactccgtcttgcttctactcaggcggaaaccatacacttctaaggcttgcctccaggtc 38606549  T
Q  290 tct 292  Q
    |||    
T  38606548 tct 38606546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 49029120 - 49028807
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaacca--------------ccca 88  Q
    ||||||||||||||||||||||||| |     |||| ||||||||||||||||||||| |||||||||||||||||||||||              ||||    
T  49029120 ctgtccgatagaactttcctttcaagt-----ggtattttcttatcgcacaaaacacctgaggctcttctccatttcaaccaaccacaaccaaccaccca 49029026  T
Q  89 gcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctc 186  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||    
T  49029025 gcttgaatacgatggcatacatctgcttctatttctccatcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatgatctgatctc 49028926  T
Q  187 caa-------------ggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaa 273  Q
    |||             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49028925 caactttcacctccaaggtagacctacttctccttcccctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaa 49028826  T
Q  274 ggcttgcctccaggtctct 292  Q
    |||||||||||||||||||    
T  49028825 ggcttgcctccaggtctct 49028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 36869728 - 36870031
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  36869728 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacccctgaggctcttctccatttcaaccacccagcttgaatacgatgg 36869827  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa------------ 189  Q
    ||||||||||||| ||||||| ||||||||||||| | ||| ||||||||||||||||| |||| ||  ||||||||||| |||||||                
T  36869828 cttacatctgcttttatttcttcgtcattttgtactatggatccaagatatttaaaccgcgtaatttggggtatgatatgctctccaactttcacctcca 36869927  T
Q  190 -ggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
     ||||||| |||||  ||||   ||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||| |||||||||||||     
T  36869928 gggtagacatactttcccttttcctgaagttacattccatatactatgtcttgcttctactcaagcggaaaccatacgcttctaaagcttgcctccaggc 36870027  T
Q  289 ctct 292  Q
    ||||    
T  36870028 ctct 36870031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 35906639 - 35906796
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  35906639 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaagatcttctccatttcaaccacccagcttgaatacgatg 35906738  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35906739 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaac 35906796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 4 - 292
Target Start/End: Complemental strand, 32630438 - 32630147
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||     
T  32630438 tgtccgatagaactttcctttcagcttaagtgatactttcttatcgcacaaaacactcgaggctcttctccatttcaactacccagcttgaatacgatga 32630339  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctccaa------------ 189  Q
                | || |||||| ||||||||||  | |||||||||||||||||||||||||||||||  |||||||||||||||||                
T  32630338 ------------tgtaattctccatcattttgtaatatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcca 32630251  T
Q  190 -ggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
     |||||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  32630250 aggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaaaccatacgcttctaaggcttgcctccaggt 32630151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 4 - 274
Target Start/End: Complemental strand, 48919231 - 48918946
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||     
T  48919231 tgtccgatataaccttcctttcaacttaaggggtactttcttatcgcacaaaacacctgaggctcttctccatttcaactacccagcttgaatacgatga 48919132  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctc-------------ca 188  Q
     | |||| ||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||||  ||| | ||||||||||             ||    
T  48919131 ttcacatatgcttctatttctccgtcattttgtactatggatccaaaatatttaaaccgtgtaacttggggtgtaatatgatctcctacttttaccttca 48919032  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaag 274  Q
    | |||||||||||||||| |  |||||||| ||||||||||||||||||||||||| |||| | ||| || ||||| |||||||||    
T  48919031 atgtagacctacttctccatttgctgaagtcacattccatatactccgtcttgcttctacttaggcgaaaaccatatgcttctaag 48918946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 43281520 - 43281389
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  43281520 ctgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacgcctgaggctcttctccatttcaaccacccagcttgaatacgatg 43281421  T
Q  103 gcttacatctgcttctatttctccgtcatttt 134  Q
      ||||||||||||||||||||||||||||||    
T  43281420 atttacatctgcttctatttctccgtcatttt 43281389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 33072797 - 33072666
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||    
T  33072797 tgtccgatagaactttccttttaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccatccaacttgaatacgatgg 33072698  T
Q  104 cttacatctgcttctatttctccgtcattttg 135  Q
    |||||||||||||||| || ||||||||||||    
T  33072697 cttacatctgcttctaattatccgtcattttg 33072666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 34869264 - 34869159
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||    
T  34869264 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacgcctgaggctcttctccaattcaaccacccagcttgaatatgatg 34869165  T
Q  103 gcttac 108  Q
    ||||||    
T  34869164 gcttac 34869159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 84 - 292
Target Start/End: Original strand, 24177714 - 24177937
Alignment:
Q  84 acccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatg 181  Q
    ||||| |||||||| ||||  |||||||||||||||||||||||||||||||||| |  |||||  |||||||||||||||||| ||||  |||||||||    
T  24177714 acccaacttgaatatgatgatttacatctgcttctatttctccgtcattttgtactattgacccgtgatatttaaaccgtgtaaattggggtatgatatg 24177813  T
Q  182 atctccaa-------------ggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgct 268  Q
    ||||||||             | ||||||||||||| |||  ||||||||||||||||||||||||| ||||| |  |||||| || ||| ||||||| |    
T  24177814 atctccaaccttcatctacaagctagacctacttcttcttttgctgaagttacattccatatactccatcttgatgctactcatgcagaaaccatacgtt 24177913  T
Q  269 tctaaggcttgcctccaggtctct 292  Q
    ||||||||||||||||||||||||    
T  24177914 tctaaggcttgcctccaggtctct 24177937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 7272879 - 7272785
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||| ||||||||| |||||||||| |||||||||||||| ||||||| ||| |||||| ||||| || |||||||||||||||||||||||||    
T  7272879 ccgatacaactttcctctcaacttaagtggtactttcttatcacacaaaatacctgaggct-ttctcaatctcaaccacccagcttgaatacgatg 7272785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 23404261 - 23404181
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaacca 84  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||||| |||||    
T  23404261 tgtccgatagaattttcctttcaacttaagtggtcctttcttatctcagaaaacacctgaggctcttctccattttaacca 23404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 12841713 - 12841770
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacc 60  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12841713 ctgtacgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacc 12841770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 43793501 - 43793663
Alignment:
Q  23 ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctattt 122  Q
    ||||||||||| |||||||||  ||| || || ||||| ||||  || |||||||||||||||| |||||  ||  ||||| |||||||| ||   ||||    
T  43793501 ttcaacttaagcggtactttcacatcacataatacacctgaggaactcctccatttcaaccacctagcttagatttgatggtttacatctcct---attt 43793597  T
Q  123 ctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctc 186  Q
    || ||||||||||||| |  |||||||||||||||||  ||||||||  |||||||||||||||||    
T  43793598 cttcgtcattttgtactatagacccaagatatttaaaatgtgtaactagtggtatgatatgatctc 43793663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 418907 - 419002
Alignment:
Q  63 aggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaa 159  Q
    |||||||||||||||||| |||||||||||||||  ||||  ||||||||    |||||||||||||||||| ||| | ||||||||||||||||||    
T  418907 aggctcttctccatttcacccacccagcttgaatctgatgt-ttacatctctcactatttctccgtcattttctacaatggacccaagatatttaaa 419002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 21517823 - 21517926
Alignment:
Q  63 aggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccg 162  Q
    ||||||||||| |||||||||||||| |||||||| ||||  |||||| || |  ||||||| ||||| ||||||| | | | ||||||||||||||| |    
T  21517823 aggctcttctcgatttcaaccacccaacttgaatatgatgatttacatatgttattatttcttcgtca-tttgtactatgaatccaagatatttaaactg 21517921  T
Q  163 tgtaa 167  Q
    |||||    
T  21517922 tgtaa 21517926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 23087559 - 23087694
Alignment:
Q  22 tttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatt 121  Q
    |||||||||||  ||||| ||  |||| || ||||||  |||||||||| ||||||||||||| | | ||||||||| |||  ||||||   ||| ||||    
T  23087559 tttcaacttaaatggtacgtttgtatcacataaaacagacgaggctcttttccatttcaaccatctaacttgaatacaatgatttacatacacttttatt 23087658  T
Q  122 tctccgtcattttgtacgaaggacccaagatattta 157  Q
    ||||| ||||||||||| | | |||||||| |||||    
T  23087659 tctccttcattttgtactatgaacccaagagattta 23087694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 18637388 - 18637236
Alignment:
Q  36 gtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttg 135  Q
    |||||||  |||| || |||||||  ||||| || ||||||||||||  | ||||||| || |||||| ||||||||   |||||||| |||||||||||    
T  18637388 gtacttttgtatcacataaaacacatgaggcactcctccatttcaactgctcagcttggattcgatggtttacatct---tctatttccccgtcattttg 18637292  T
Q  136 tacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    ||| |   ||  ||||||||||||  ||||||||  || |||||||||||||||||    
T  18637291 tactatcaacttaagatatttaaaatgtgtaacttgtgatatgatatgatctccaa 18637236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 18650823 - 18650671
Alignment:
Q  36 gtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttg 135  Q
    |||||||  |||| || |||||||  ||||| || ||||||||||||  | ||||||| || |||||| ||||||||   |||||||| |||||||||||    
T  18650823 gtacttttgtatcacataaaacacatgaggcactcctccatttcaactgctcagcttggattcgatggtttacatct---tctatttccccgtcattttg 18650727  T
Q  136 tacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    ||| |   ||  ||||||||||||  ||||||||  || |||||||||||||||||    
T  18650726 tactatcaacttaagatatttaaaatgtgtaacttgtgatatgatatgatctccaa 18650671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 38897197 - 38897151
Alignment:
Q  246 tactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||    
T  38897197 tactcaagcggaatccatacacttcgaaggcttgcctccaagtctct 38897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 18608190 - 18608316
Alignment:
Q  62 gaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaacc 161  Q
    ||||| || ||||||||||||  | ||||||| || |||||| ||||||||   |||||||| |||||||||||||| |   ||  ||||||||||||      
T  18608190 gaggcactcctccatttcaactgctcagcttggattcgatggtttacatct---tctatttccccgtcattttgtactatcaacttaagatatttaaaat 18608286  T
Q  162 gtgtaact--tggtatgatatgatctccaa 189  Q
    ||||||||  || |||||||||||||||||    
T  18608287 gtgtaacttgtgatatgatatgatctccaa 18608316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 25579549 - 25579614
Alignment:
Q  40 tttcttatcgcacaaaacacccgaggctct--tctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| |||| || |||| ||||||||||||  ||||||||| ||||||||| ||||||||||||||    
T  25579549 tttcgtatcacataaaatacccgaggctctcttctccattttaaccacccaacttgaatacgatgg 25579614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 33139083 - 33139006
Alignment:
Q  35 ggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatct 112  Q
    ||||| |||||| ||||||| ||||   | ||||||||||||||||| |||||| | |||||||||||  ||||||||    
T  33139083 ggtacattcttagcgcacaatacacattaagctcttctccatttcaatcacccaacatgaatacgatgatttacatct 33139006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 12965720 - 12965652
Alignment:
Q  70 tctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtac 138  Q
    ||||||||||||||||||| ||||||| | |||| ||||||||  |  || ||||||| ||||||||||    
T  12965720 tctccatttcaaccacccaacttgaattcaatggattacatctcatattacttctccgacattttgtac 12965652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 1275109 - 1274805
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  1275109 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacaccttaggctcttcttcatttcaaccacccagcttgaatacgatg 1275010  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatg-------------atctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||             ||||||    
T  1275009 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctcc 1274910  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  1274909 aaggtagacctacttctcctttcgctgaagttacattccatatactccgtcttgcttctactcaaccggaatccatacgcttctaaggcttgcctccagg 1274810  T
Q  288 tctct 292  Q
    |||||    
T  1274809 tctct 1274805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 287
Target Start/End: Original strand, 28977296 - 28977594
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28977296 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 28977395  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctcc-------------a 188  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||             |    
T  28977396 cttacatctacttctattactccgtcattttgtacgaaggacccaagatatttaaaccgtgtgacttggggtatgatatgatctccaactttcacctcta 28977495  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28977496 aggtagacctacttctccttccgttgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 28977594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 10639141 - 10638838
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  10639141 ctgttcgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgatg 10639042  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  10639041 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatttccaactttcacctcc 10638942  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10638941 aaggtagacctacttctccttccactgaagttacattccatatactccgtctttcttctactcaagc-gaatccatacgcttctaaggcttgcctccagg 10638843  T
Q  288 tctct 292  Q
    |||||    
T  10638842 tctct 10638838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 292
Target Start/End: Complemental strand, 24178364 - 24178064
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctt 106  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||    
T  24178364 ccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccaacttgaatatgatggctt 24178265  T
Q  107 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatc-------------tccaagg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||             |||||||    
T  24178264 acatctgcttctatttctccgtcattttgtacgaaggacccaagatctttaaaccgtgtaacttagggtatgatatgatctccaactttcacttccaagg 24178165  T
Q  192 tagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  24178164 tagacctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacacttctaaggcttgccttcaggtctc 24178065  T
Q  292 t 292  Q
    |    
T  24178064 t 24178064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 6 - 292
Target Start/End: Complemental strand, 20318828 - 20318531
Alignment:
Q  6 tccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggct 105  Q
    ||||||| |||||||||||||||||||| |||||||    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  20318828 tccgatataactttcctttcaacttaagtggtactt----atcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatggct 20318733  T
Q  106 tacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctccaag 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             |||||||    
T  20318732 tacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaag 20318633  T
Q  191 gtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtct 290  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20318632 gtagaactacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtct 20318533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 1288027 - 1288331
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||    
T  1288027 ctgttcgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgatg 1288126  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||             ||||    
T  1288127 gcttacatctgcttctatttctccgtcattttgtacgaaggactcaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 1288226  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  1288227 aaggtagacttacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcagaatccatacgcttctaaggcttgtctccagg 1288326  T
Q  288 tctct 292  Q
    |||||    
T  1288327 tctct 1288331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 2075912 - 2076216
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  2075912 ctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttcttcatttcaaccacccaacttgaatacgatg 2076011  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  2076012 gcttacatctgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 2076111  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  2076112 aaggtagaactgcttctccttccgctgaagttacattccatgtactctgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagc 2076211  T
Q  288 tctct 292  Q
    |||||    
T  2076212 tctct 2076216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 12492825 - 12493091
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12492825 ctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 12492924  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  12492925 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaacttttacctcc 12493024  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagc 254  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12493025 aaggtagagctacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagc 12493091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 3301695 - 3301389
Alignment:
Q  1 tactgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacga 100  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  3301695 tactgtccgatagaactttcctttcaatttaagtggtactttcttatcgcacaaaacacctgaggctcatctctatttcaaccacccagcttgaatacga 3301596  T
Q  101 tggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ct 185  Q
    ||  || ||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||  |||||||||||||             ||    
T  3301595 tgatttgcatctgcttctatttctccttcatttggtactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 3301496  T
Q  186 ccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcca 285  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  3301495 ccaaggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaaaccatactcttctaaggcttgcctcca 3301396  T
Q  286 ggtctct 292  Q
    |||||||    
T  3301395 ggtctct 3301389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 3394557 - 3394251
Alignment:
Q  3 ctgtccgatagaactttcct---ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacg 99  Q
    ||||||||||||||||||||   |||| |||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  3394557 ctgtccgatagaactttcctcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcatctccatttcaaccacccagcttgaatacg 3394458  T
Q  100 atggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------c 184  Q
    |||  |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||||||             |    
T  3394457 atgatttacatctgcttctatttctccgtcattttgtactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacc 3394358  T
Q  185 tccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcc 284  Q
    ||||||||||||| ||||||||||  |||||| ||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  3394357 tccaaggtagacccacttctccttttgctgaa-ttacattccatatactctgtcttgcttctactcaggcggaaaccatacgcttctaaggcttgcctcc 3394259  T
Q  285 aggtctct 292  Q
    ||||||||    
T  3394258 aggtctct 3394251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 16347879 - 16348085
Alignment:
Q  41 ttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacga 140  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||||||||  ||||||  |||| ||||||||||||||||||||| |    
T  16347879 ttcttattgcacaaaacacctgaggctcttctccatttcaaccaccta-cttgaatacgatgatttacatacgcttttatttctccgtcattttgtacta 16347977  T
Q  141 aggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctccaaggtagacctacttctccttccgctgaagttacattc 225  Q
     |||| ||||||||||||||||||||||||  |||||||||||||             |||||||||||||||||||||||||  ||||||||||||||     
T  16347978 tggacacaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttttgctgaagttacattt 16348077  T
Q  226 catatact 233  Q
    ||||||||    
T  16348078 catatact 16348085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 34272866 - 34272758
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  34272866 ctgtccgattgaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccattttaaccacccaacttgaatacgatg 34272767  T
Q  103 gcttacatc 111  Q
    |||||||||    
T  34272766 gcttacatc 34272758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 36200625 - 36200440
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||| ||||| ||||||||||||||||   | | ||||||||| || |||||||  ||| ||||||||||||||||||||||| ||| |||| ||||     
T  36200625 tgtccggtagaattttcctttcaacttaaacagcattttcttatcacataaaacacatgagtctcttctccatttcaaccacccaacttaaatatgatga 36200526  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctcc 187  Q
     |||||| |||| ||||||||  |||||||||||| | | |||||| |||||||||| |||||||||  |||||||||||| ||||    
T  36200525 tttacatatgctactatttctatgtcattttgtactatgaacccaaaatatttaaacggtgtaacttgaggtatgatatgacctcc 36200440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 43558266 - 43558440
Alignment:
Q  17 tttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgctt 116  Q
    ||||| |||||||| || ||||||||  |||| || |||||||   ||||| ||||||||||| || |||| |||||||| |||||  ||||||||||||    
T  43558266 tttcccttcaacttgagcggtactttagtatcacataaaacactttaggctattctccatttccactaccctgcttgaattcgatgatttacatctgctt 43558365  T
Q  117 ctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    ||||||||| ||  |||||||| | ||||| |||||||||||| |||||||||  ||||||| ||||||||||||    
T  43558366 ctatttctctgtggttttgtacaatggacctaagatatttaaatcgtgtaacttgtggtatgctatgatctccaa 43558440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 27737 - 27622
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||| |  ||||||| |||| |||||||| ||||| |||||||| |||||||| ||||     
T  27737 tgtcagatagaattttcctttcaacttaagtggtactttcttatcacgtaaaacactcgagactcttctctatttccaccacccaacttgaatatgatga 27638  T
Q  104 cttacatctgcttcta 119  Q
     |||||| || |||||    
T  27637 tttacatttgattcta 27622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 27302449 - 27302573
Alignment:
Q  64 ggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgt 163  Q
    ||||||| |||||||||||||| || |||||||||||||  ||||||   |||||||||||||| | |||||||  | |||| |||||||||||||||||    
T  27302449 ggctcttttccatttcaaccactcaacttgaatacgatgatttacat---cttctatttctccgccgttttgtattatggacacaagatatttaaaccgt 27302545  T
Q  164 gtaactt--ggtatgatatgatctccaa 189  Q
    |||  ||  |||||||||||||||||||    
T  27302546 gtagtttgaggtatgatatgatctccaa 27302573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 43423578 - 43423656
Alignment:
Q  70 tctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggaccca 148  Q
    ||||||||||||||||||| |||||||| ||||  |||||||||||||| ||||||||||||||||||| | |||||||    
T  43423578 tctccatttcaaccacccaacttgaatatgatgatttacatctgcttctgtttctccgtcattttgtactacggaccca 43423656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 27549 - 27483
Alignment:
Q  213 tgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttg 279  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||  | ||||||||||| |||||    
T  27549 tgaagttacattccctatactctgtcttgcttttactcaagcggaagtcctacgcttctaacgcttg 27483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 20077305 - 20077389
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgta 137  Q
    |||||||| ||||||||||||||||||||||| ||| | |||| | ||||  || |||||||||  |||||||||||||||||||    
T  20077305 aaaacacctgaggctcttctccatttcaaccatccaacctgaaaatgatgatttgcatctgctttaatttctccgtcattttgta 20077389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 16347817 - 16347868
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaa 55  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  16347817 tgtccgatagaactttcctttcaacttaagtggtaatttcttattgcacaaa 16347868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 17341748 - 17341827
Alignment:
Q  112 tgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
    ||||||||||||||  ||||||| ||| | |||||||| ||||||||||| ||||| ||  |||||||||||||||||||    
T  17341748 tgcttctatttctctatcattttctactatggacccaatatatttaaaccatgtaatttcaggtatgatatgatctccaa 17341827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 38578974 - 38579127
Alignment:
Q  35 ggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcatttt 134  Q
    ||||||||  |||| || |||||||  ||||| || ||||||||||||||| ||||||| || |||| | ||||||   ||||| |||  ||||||||||    
T  38578974 ggtacttttgtatcacataaaacacatgaggcactcctccatttcaaccactcagcttggattcgatcgtttacat---cttctgttttcccgtcatttt 38579070  T
Q  135 gtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
    |||| |   || |||||||||||||| ||||||||  || ||| |||||||||||||    
T  38579071 gtactatcaactcaagatatttaaactgtgtaacttgtgctataatatgatctccaa 38579127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 3097000 - 3096858
Alignment:
Q  23 ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctattt 122  Q
    ||||||||||| |||| ||||  ||| || ||||||||  |||||||  ||||||||||||||||| |||||||  ||||| ||| |||  ||| |||      
T  3097000 ttcaacttaagcggtattttcacatcacataaaacacctaaggctctcatccatttcaaccacccaacttgaatttgatggtttatatccccttatat-- 3096903  T
Q  123 ctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttg 171  Q
        |||||||||||| |   |||||||||||||||||| |||||||||    
T  3096902 ----gtcattttgtactataaacccaagatatttaaaccatgtaacttg 3096858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 21915687 - 21915562
Alignment:
Q  46 atcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggac 145  Q
    |||||| |||||| | ||||| || |||||||||||| ||||| |||| |  | |||| |||  | | ||||||||||| ||| ||||||||| |  ||     
T  21915687 atcgcataaaacatctgaggcactcctccatttcaactacccaacttggactcaatggtttaattttccttctatttcttcgttattttgtactattgaa 21915588  T
Q  146 ccaagatatttaaaccgtgtaacttg 171  Q
    |||| |||||||||||||||||||||    
T  21915587 ccaatatatttaaaccgtgtaacttg 21915562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 16779508 - 16779419
Alignment:
Q  21 ctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacat 110  Q
    |||||||||| |  ||||||||| |||| || |||||| | ||| |||||||||||||||||||| ||  ||||||  ||||| ||||||    
T  16779508 ctttcaacttgaatggtactttcgtatcacataaaacatctgagtctcttctccatttcaaccactcaaattgaatttgatggtttacat 16779419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 6368435 - 6368550
Alignment:
Q  75 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tgg 172  Q
    ||||||||||  ||||||| || | |||| ||| ||||  || |||||||||||| |||||||| |  ||  |||||||||||||  ||||||||  |||    
T  6368435 atttcaaccattcagcttggattcaatggtttatatctctttttatttctccgtcgttttgtactatagatacaagatatttaaattgtgtaacttgtgg 6368534  T
Q  173 tatgatatgatctcca 188  Q
    |||| |||||||||||    
T  6368535 tatgttatgatctcca 6368550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 28676308 - 28676253
Alignment:
Q  67 tcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttc 123  Q
    ||||||||||||||||||| || |||||||||||||  || ||| ||||||||||||    
T  28676308 tcttctccatttcaaccacaca-cttgaatacgatgatttgcatatgcttctatttc 28676253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 28676406 - 28676330
Alignment:
Q  35 ggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatc 111  Q
    ||||||||| |||| || |||| || ||||||||||||||||||||  ||||||   |||||||||||  |||||||    
T  28676406 ggtactttcatatcacataaaatactcgaggctcttctccatttcattcacccataatgaatacgatgatttacatc 28676330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 47542149 - 47542453
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  47542149 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatg 47542248  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||             ||||    
T  47542249 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgaaatgatctccaactttcacctcc 47542348  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47542349 aaggtagacctacttctccttctgctgaagttacattccatacactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 47542448  T
Q  288 tctct 292  Q
    |||||    
T  47542449 tctct 47542453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 51448147 - 51448451
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  51448147 ctgtccgatataactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgata 51448246  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  51448247 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 51448346  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||    
T  51448347 aaggtagacctacttctccttccgctgaagttacatttcatatactccgtcttgcttctactcaagcggaatccatacgcttctaagacttgcctctagg 51448446  T
Q  288 tctct 292  Q
    |||||    
T  51448447 tctct 51448451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 292
Target Start/End: Complemental strand, 38849937 - 38849634
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||| ||  || ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  38849937 tgtccgataaaaaatttctttcaacttaagtggtactttgttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacaatgg 38849838  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcca 188  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||  |||||||||||||             |||||    
T  38849837 cttacatctgcttctatttctccgtcattttgtactgtggacccaagatatttaaaccgtgtaaattgaggtatgatatgatctccaactttcacctcca 38849738  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||||| ||||||||||||||||| ||||||| || || ||||||||||||| |    
T  38849737 aggtagacctacttctccttttgatgtagttacattccatatactccgtcttacttttactcaagcggaaaccatacgattatagggcttgcctccagat 38849638  T
Q  289 ctct 292  Q
    ||||    
T  38849637 ctct 38849634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 8 - 292
Target Start/End: Complemental strand, 25191218 - 25190919
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctta 107  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||    
T  25191218 cgatagaaccttcctttcaacttaagtggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgatgattta 25191119  T
Q  108 catctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgat-------------ctccaaggt 192  Q
    ||| ||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||  |||||||||||             |||||||||    
T  25191118 catttgcttctatttctccatcattttgtactatagacccaagatatttaaaccgtgtaacttgggctatgatatgatctccaactttcacctccaaggt 25191019  T
Q  193 agacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||| || |||||  || || |||||||||| |||||| ||||||||    
T  25191018 agacccacttctccttttgctgaagttacattccatatactccgtcttgcttctacttaatcggaaatcacacacttctaaggcgtgcctctaggtctct 25190919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 3 - 189
Target Start/End: Complemental strand, 28245281 - 28245093
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||    
T  28245281 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacaactgagactcttctccatttcaaccacccagcttgaatacgatg 28245182  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||  ||||| |||||||||||||    
T  28245181 gcttacatctgcttctatttctccatcattttgtacgaaggatccaagatatttaagccgtgtaacttggggtattatatgatctccaa 28245093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 52138551 - 52138368
Alignment:
Q  124 tccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctccaa-------------ggtagacctacttctcctt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||             |||||||||||||||||||    
T  52138551 tccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctcctt 52138452  T
Q  209 ccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  52138451 ccgctgaagttacattccatatactccgtcttgcttctactcaaacagaatccatacgcttctaaggcttgcctccaggtctct 52138368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 27917411 - 27917228
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctta 107  Q
    |||||||| ||| | ||||||||||| |||||||| ||||| || |||||||  |||||||||||| |||||| | ||||| |||||||||||||  |||    
T  27917411 cgatagaatttttcattcaacttaagtggtacttttttatcacataaaacacatgaggctcttctctatttcagctacccaacttgaatacgatgattta 27917312  T
Q  108 catctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctccaa 189  Q
     || ||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  27917311 tatatgcttatatttctccgtcattttgtactatggactcaagatatttaaaccgtgtaacttgggatatgatatgatctccaa 27917228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 54425349 - 54425511
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctta 107  Q
    ||||| || ||||||| ||||||||| |||||||||||||| ||||||||||  ||| ||||| | |||||||||| || ||||| |||||||||  |||    
T  54425349 cgataaaattttccttccaacttaagtggtactttcttatcacacaaaacacatgagactctttttcatttcaaccgcctagcttaaatacgatgattta 54425448  T
Q  108 catctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt 170  Q
    ||| ||||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||    
T  54425449 catatgcttctatttctccgtcattttttactatggatccaagatatttaaaccgtgtaactt 54425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 52138644 - 52138553
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttga 94  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  52138644 ctgtccgatagaactttcctttcaacttaagtggtattttcttatcgcacaagacacctgagactcttctccatttcaaccacccagcttga 52138553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 29817347 - 29817161
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||| ||||| ||| ||||||||||||| | |||||||||||| || ||||||    || || ||||| |||||||||||||| |||||||||||||     
T  29817347 tgtccggtagaaattttctttcaacttaagcgttactttcttatcacataaaacataacagactattctctatttcaaccacccaacttgaatacgatga 29817248  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
     ||||||||||   ||||| ||||||||||||||| | ||  | ||||||||| ||||||||||||  ||||||||||||||||||||    
T  29817247 tttacatctgccgttatttatccgtcattttgtactatgg-tcaaagatatttgaaccgtgtaacttatggtatgatatgatctccaa 29817161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 9258584 - 9258436
Alignment:
Q  142 ggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctccaaggt---------agacctacttctccttccgctgaagttacattccatat 230  Q
    |||||||||||||||||||||||||||||||  ||||||||||| || || ||         ||||||||||||||||  | ||||||||||||||||||    
T  9258584 ggacccaagatatttaaaccgtgtaacttgggatatgatatgatatctaatgttcacctctaagacctacttctccttttgttgaagttacattccatat 9258485  T
Q  231 actccgtcttgcttttactcaagcggaatccatacgcttctaaggcttg 279  Q
    |||||||||||||| |||||| |||||| ||| |||||| |||||||||    
T  9258484 actccgtcttgcttctactcaggcggaaaccacacgcttttaaggcttg 9258436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 30345363 - 30345276
Alignment:
Q  11 tagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatac 98  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||    
T  30345363 tagaattttcctttcaatttaagcggtactttcttatcgcataaaacacctgagactcttctccatttcaaccacccaacttgaatac 30345276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 48221608 - 48221444
Alignment:
Q  23 ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctattt 122  Q
    |||||||| ||  |||||||| |||| |||||||||   |||| |||||| ||||||||||| |||| |||||| |||||  |||||| |||||||| ||    
T  48221608 ttcaacttgagcagtactttcgtatcacacaaaacattggaggttcttcttcatttcaaccatccagtttgaattcgatgatttacatatgcttctactt 48221509  T
Q  123 ctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatct 185  Q
    ||| |||||||||||| | | | ||||||||||||||  ||||||||  ||||||||||||||||    
T  48221508 ctctgtcattttgtactatgaatccaagatatttaaaatgtgtaacttgtggtatgatatgatct 48221444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 5168671 - 5168599
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccat 76  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  5168671 tgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccat 5168599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 26490101 - 26489975
Alignment:
Q  63 aggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccg 162  Q
    ||||| |||| ||| |||||||| || ||| |||| ||||  |||||||||||||||||||||||||||||| ||  | ||| |||||||||||||| |     
T  26490101 aggctattcttcatctcaaccactcaacttcaatatgatgatttacatctgcttctatttctccgtcattttatatcatggaaccaagatatttaaatca 26490002  T
Q  163 tgtaacttg--gtatgatatgatctcc 187  Q
    |||||||||  ||||||||||||||||    
T  26490001 tgtaacttggagtatgatatgatctcc 26489975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 19757820 - 19757724
Alignment:
Q  95 atacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
    ||||||||  |||||||||||  |||||||| || ||||||||| | |||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  19757820 atacgatgatttacatctgctcttatttctctgttattttgtactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaa 19757724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 53519430 - 53519353
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttca 80  Q
    ||||||||||||  |||||||| | |||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  53519430 ctgtccgatagatttttcctttaagcttaagtgatactttcttatcgcacaaaacacctgaggctcttctccatttca 53519353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 3186612 - 3186500
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||| |||||||||||||||||||| | |||||||||||| |  |||||||  ||   | |||| ||||||||||||||| |||||||||||||     
T  3186612 tgtccgatataactttcctttcaacttaagtgatactttcttatcacctaaaacacatgaaaatattcttcatttcaaccacccaacttgaatacgatgt 3186513  T
Q  104 cttacatctgctt 116  Q
     ||||||||||||    
T  3186512 tttacatctgctt 3186500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 19757632 - 19757524
Alignment:
Q  184 ctccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctc 283  Q
    |||||||||||  ||||||  ||||  ||| |||||||||||||||||||| ||||||||| |||| | |||||  |||||||||||||||||||| |||    
T  19757632 ctccaaggtaggactactttgccttttgctaaagttacattccatatactctgtcttgcttctactaaggcggatgccatacgcttctaaggcttgtctc 19757533  T
Q  284 caggtctct 292  Q
    || ||||||    
T  19757532 caagtctct 19757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 292
Target Start/End: Complemental strand, 19736787 - 19736706
Alignment:
Q  211 gctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    |||||||||||||||||||||||| ||||||||| |||| | |||||  |||||| ||||||||||||| ||| | ||||||    
T  19736787 gctgaagttacattccatatactctgtcttgcttctactaaggcggatgccatacacttctaaggcttgtctctaagtctct 19736706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 40674556 - 40674634
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacc 86  Q
    |||||||| ||||||||||||||||| | |||||||||||| || |||||| |  || |||||| ||| ||||||||||    
T  40674556 cgatagaattttcctttcaacttaagtgatactttcttatcacataaaacatctcagactcttccccacttcaaccacc 40674634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 19736914 - 19736822
Alignment:
Q  95 atacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
    ||||||||  |||||||||||  |||||||| || ||||||||| | ||    |||||||||||||| ||||||||  |||||||||||||||||||    
T  19736914 atacgatgatttacatctgctcttatttctctgttattttgtactatgg----aagatatttaaaccatgtaacttggggtatgatatgatctccaa 19736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 44395200 - 44395106
Alignment:
Q  74 catttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttg 171  Q
    ||||||||||||  | ||||||| |||||| ||||||||   |||||||||| ||  ||| |||| | |||||| ||||||||||| |||||||||||    
T  44395200 catttcaaccacttaacttgaattcgatggtttacatct---tctatttctctgttgtttagtactatggacccgagatatttaaatcgtgtaacttg 44395106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 805553 - 805519
Alignment:
Q  221 cattccatatactccgtcttgcttttactcaagcg 255  Q
    |||||||||||||||||||||||| ||||||||||    
T  805553 cattccatatactccgtcttgcttctactcaagcg 805519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 29817124 - 29817058
Alignment:
Q  213 tgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttg 279  Q
    |||||||||||||||||||||| |||||| || || ||| || ||| ||| || |||||||||||||    
T  29817124 tgaagttacattccatatactctgtcttgattctattcaggcagaagccacacacttctaaggcttg 29817058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 46145929 - 46145809
Alignment:
Q  71 ctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact- 169  Q
    ||||||| |||||| | | ||||||| | |||| ||||| ||  ||||||| || |||| |||||||| | |||| ||| ||||||||||||| |||||     
T  46145929 ctccattccaaccatctaacttgaattcaatggtttacacctctttctattgctacgtcgttttgtactatggactcaaaatatttaaaccgtataactt 46145830  T
Q  170 -tggtatgatatgatctccaa 189  Q
     |||||||| || ||||||||    
T  46145829 gtggtatgacataatctccaa 46145809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 50632442 - 50632542
Alignment:
Q  26 aacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctc 125  Q
    ||||| || |||||||||| ||| || |||||||   |||| || |||||| |||||||||||| |||||| | |||| || ||||| |||||||| |||    
T  50632442 aacttgagtggtactttctcatcacataaaacacttaaggcactcctccatctcaaccacccaggttgaattctatggtttccatctacttctattgctc 50632541  T
Q  126 c 126  Q
    |    
T  50632542 c 50632542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 36565679 - 36565983
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36565679 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 36565778  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  36565779 gcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 36565878  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36565879 aaggtagacctacttctccttccgttgaagttacatttcatatactctatcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagg 36565978  T
Q  288 tctct 292  Q
    |||||    
T  36565979 tctct 36565983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 12492280 - 12492584
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||     
T  12492280 ctgtccgatagaactttcctttcatcttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccaacctgaatacgata 12492379  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  12492380 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 12492479  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  12492480 aaggtagacctacttatccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaatccatacgcttctaaggcttacctccagg 12492579  T
Q  288 tctct 292  Q
    |||||    
T  12492580 tctct 12492584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 6 - 292
Target Start/End: Complemental strand, 36544993 - 36544692
Alignment:
Q  6 tccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggct 105  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||    
T  36544993 tccgatagaactttcttttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttatccatttcaaccacccaacttgaatacgatgact 36544894  T
Q  106 tacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctccaag 190  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||  |||||||||||||             |||||||    
T  36544893 tacatctgcttctatttctccgtcattttgtacgaaagccccatgatatttaaaccttgtaacttggggtatgatatgatctccaactttcacctccaag 36544794  T
Q  191 gtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtct 290  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||| ||||||    
T  36544793 gtagacctacttctccttccgctaaagttacattccatatactctgtcttgcttctactcaagtggaatccatacggttctaaggcttgcctctaggtct 36544694  T
Q  291 ct 292  Q
    ||    
T  36544693 ct 36544692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 42854442 - 42854755
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  42854442 ctgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgatg 42854541  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ctcc 187  Q
      |||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||             ||||    
T  42854542 atttacatctgcttctatttctcaaacattttgtacgatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccacctttcacctcc 42854641  T
Q  188 aaggtagacctacttctcct-----tcc----gctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggctt 278  Q
    |||||||||| |||||||||     |||    |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||    
T  42854642 aaggtagacccacttctccttttgctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaaaccatacgcttttaaggctt 42854741  T
Q  279 gcctccaggtctct 292  Q
    ||||||||||||||    
T  42854742 gcctccaggtctct 42854755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 15215707 - 15216012
Alignment:
Q  1 tactgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacga 100  Q
    |||||| ||||||||||||||||||| |||||| | |||||||||| ||||||| ||||  ||||||||||||||||||||||||| |||||||||||||    
T  15215707 tactgttcgatagaactttcctttcagcttaagtgatactttcttaccgcacaagacactggaggctcttctccatttcaaccacctagcttgaatacga 15215806  T
Q  101 tggcttacatctgc-ttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa-------- 189  Q
    ||  |||||||||| ||||||||||  |||| ||||||| | |||||||| ||||||||||||||||||||  |||||||||||||||||||            
T  15215807 tgatttacatctgctttctatttct--gtcactttgtactatggacccaatatatttaaaccgtgtaactttgggtatgatatgatctccaactttcacc 15215904  T
Q  190 -----ggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcc 284  Q
         |||||||| ||||||||||  |||||||||||||| ||| ||||||||||||||| |||||| |||||| ||||| |||||||||  ||||||||    
T  15215905 tccatggtagacccacttctccttttgctgaagttacatttcatgtactccgtcttgcttctactcaggcggaaaccatatgcttctaagttttgcctcc 15216004  T
Q  285 aggtctct 292  Q
    ||||||||    
T  15216005 aggtctct 15216012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 258
Target Start/End: Original strand, 4032933 - 4033202
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||     
T  4032933 tgtccgataaaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatatgatga 4033032  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatg-------------atctcca 188  Q
     |||||| ||||| ||||||||| ||||| ||||| | | |||||||||| ||||||||||||||||  |||||||||||             |||||||    
T  4033033 tttacatatgcttttatttctccatcattgtgtactatgaacccaagatacttaaaccgtgtaacttggggtatgatatgatctccaactttcatctcca 4033132  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaa 258  Q
    |||||||||| || ||||||  ||||||||||||||||||||||||||||||| || |||||| ||||||    
T  4033133 aggtagaccttctactccttttgctgaagttacattccatatactccgtcttgtttctactcaggcggaa 4033202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 244
Target Start/End: Original strand, 8879872 - 8880128
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||| ||||||| |||||||||| ||| | |||||||||||    
T  8879872 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacctaaggttcttctctatttcaaccatccaacatgaatacgatg 8879971  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgat-------------ctcc 187  Q
       | |||||| |||||||||||| ||||||||||| | |  ||||||||||||||||||||||||||||  |||||||||||             || |    
T  8879972 ctattcatctggttctatttctccttcattttgtactatgagcccaagatatttaaaccgtgtaacttgggatatgatatgattttcaactttcaccttc 8880071  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgctt 244  Q
    | ||| |||||||||||||||  |||||||||||||| ||| |||||||||||||||    
T  8880072 acggtcgacctacttctccttttgctgaagttacatttcatgtactccgtcttgctt 8880128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 25439374 - 25439249
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttac 108  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| ||||||||  ||||    
T  25439374 gatagaactttcctttcaacttaagtggtactttcttatcacacaaaacacccgagactcttctccatttcaaccatcctgcttgcatacgatgatttac 25439275  T
Q  109 atctgcttctatttctccgtcatttt 134  Q
    || |||||||||||||||||||||||    
T  25439274 atatgcttctatttctccgtcatttt 25439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 39946701 - 39946601
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  39946701 ctgtccgatagaactttcctttcaatttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccatccagcttgaatacgatg 39946602  T
Q  103 g 103  Q
    |    
T  39946601 g 39946601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 18125018 - 18124886
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| || |||||||| |||| | ||||||||||||||||  |||||||||| |||||     
T  18125018 tgtccgatagaactttcctttcaact-aagtggtactttcttatcacataaaacacctgaggtttttctccatttcaaccattcagcttgaattcgatga 18124920  T
Q  104 cttacatctgcttctatttctccgtcattttgta 137  Q
     |||||||||||||||||||||| ||||||||||    
T  18124919 gttacatctgcttctatttctccatcattttgta 18124886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 25300075 - 25299950
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttac 108  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| | ||| ||||| ||||||||  ||||    
T  25300075 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaaccccctgcttgcatacgatgatttac 25299976  T
Q  109 atctgcttctatttctccgtcatttt 134  Q
    || |||||||||||| || |||||||    
T  25299975 atatgcttctatttccccatcatttt 25299950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 25288740 - 25288613
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaacca--cccagcttgaatacgatggctt 106  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| ||  ||| ||||| ||||||||  ||    
T  25288740 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccccctgcttgcatacgatgattt 25288641  T
Q  107 acatctgcttctatttctccgtcatttt 134  Q
    |||| |||||||||||| ||||||||||    
T  25288640 acatatgcttctatttccccgtcatttt 25288613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 13984877 - 13984695
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||| |||||| |||||||| |||||||    || ||||||||| || |||||||  ||||||||||| ||||||||||| ||| ||| |||||||||     
T  13984877 tgtccaatagaattttccttttaacttaaacaatattttcttatcacataaaacacttgaggctcttcttcatttcaaccatccaacttaaatacgatga 13984778  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatct 185  Q
     |||||||||||| |||||||  |||||||| ||| | ||||||||||||||||||||||||| |||  |||||||||||||||    
T  13984777 tttacatctgcttttatttctttgtcatttt-tactatggacccaagatatttaaaccgtgtatcttggggtatgatatgatct 13984695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 37077598 - 37077490
Alignment:
Q  14 aactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctg 113  Q
    ||||| |||||||||||||| ||||||| |||||| ||||||||||| ||| ||||||||||||||||||||  |||||||||||||||  ||||||| |    
T  37077598 aacttccctttcaacttaagtggtacttacttatcacacaaaacacctgagactcttctccatttcaaccacttagcttgaatacgatgatttacatcgg 37077499  T
Q  114 cttctattt 122  Q
    |||||||||    
T  37077498 cttctattt 37077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 28300596 - 28300730
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagat 152  Q
    |||||| ||||| |||||||||| || ||||| ||| |||||||||||||   ||||||||||| ||| |||| |||||||||||| | | |||||||||    
T  28300596 aaaacatccgagtctcttctccaatttaaccatccaacttgaatacgatgatgtacatctgcttttatatctcagtcattttgtaccatgaacccaagat 28300695  T
Q  153 atttaaaccgtgtaacttggtatgatatgatctcca 188  Q
    |||||||| ||||||||| |||||||||||||||||    
T  28300696 atttaaactgtgtaactt-gtatgatatgatctcca 28300730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 6510862 - 6511025
Alignment:
Q  11 tagaactttcctttcaacttaaggggtactttcttatcgca-caaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctta-c 108  Q
    |||||||||||||||||||||||  ||||||||||||| || |||| |||  ||| |||||||||||||||||||| || ||||||| | |||  |||      
T  6510862 tagaactttcctttcaacttaagcagtactttcttatcacatcaaaccacatgagactcttctccatttcaaccactcaacttgaatgcaatgatttatg 6510961  T
Q  109 atctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg 172  Q
    | ||||||| |||||||| ||| ||| ||| | ||| |||||||||||| ||| ||||||||||    
T  6510962 acctgcttccatttctccttcactttatactacggatccaagatatttataccatgtaacttgg 6511025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 29735655 - 29735522
Alignment:
Q  1 tactgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacga 100  Q
    ||||||||||||||| |||| ||||||||||||  || |||||||| |  | || ||||  ||  ||| ||||||||||||||||||| |||||||| ||    
T  29735655 tactgtccgatagaattttcatttcaacttaagcagtgctttcttaccagataacacacatgaa-ctcatctccatttcaaccacccaacttgaataaga 29735557  T
Q  101 tggcttacatctgcttctatttctccgtcattttg 135  Q
    ||  |||||| ||||||||||||||||||||||||    
T  29735556 tgatttacatatgcttctatttctccgtcattttg 29735522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 292
Target Start/End: Complemental strand, 13984251 - 13984170
Alignment:
Q  211 gctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||  ||||| ||||||||||||| ||||| ||||||    
T  13984251 gctgaagttacattccatatactctgtcttgcttctactcatgcggaagtcatacacttctaaggcttgtctccaagtctct 13984170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 2796398 - 2796326
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccat 76  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||  ||||||||||||||    
T  2796398 tgtccaatataactttcctttcaacttaagtggtactttcttatcgcacagaacaccgaaggctcttctccat 2796326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 36395391 - 36395443
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaa 55  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36395391 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaa 36395443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 19293784 - 19293882
Alignment:
Q  69 ttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaa 167  Q
    |||||||||||||||||||| ||| ||||||||   |||||||||||| | |||||| || |||||||||   ||||| ||||||||||||||||||||    
T  19293784 ttctccatttcaaccacccaacttaaatacgattatttacatctgcttttttttctctgtgattttgtactctggaccaaagatatttaaaccgtgtaa 19293882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 170
Target Start/End: Original strand, 33830721 - 33830838
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagat 152  Q
    |||||||  ||| ||||||  ||||| ||||| ||| |||||| ||||||  |||||| ||||| ||||||| ||||||||||||| | |||||||| ||    
T  33830721 aaaacacttgagactcttcaacattttaaccatccaacttgaacacgatgatttacatatgcttttatttcttcgtcattttgtacaatggacccaaaat 33830820  T
Q  153 atttaaaccgtgtaactt 170  Q
    |||||||| |||||||||    
T  33830821 atttaaactgtgtaactt 33830838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 38667341 - 38667214
Alignment:
Q  63 aggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatattt-aaacc 161  Q
    ||||||| ||| |||||||||| ||| ||| |||||||||  |||||||| ||| ||||||||  || |||||||| | | ||||||||||||| ||||     
T  38667341 aggctctactctatttcaaccatccaactttaatacgatgatttacatcttcttttatttctctatcgttttgtactatgaacccaagatatttaaaact 38667242  T
Q  162 gtgtaacttggtatgatatgatctccaag 190  Q
     |||||||| |||||||||||||||||||    
T  38667241 ttgtaactt-gtatgatatgatctccaag 38667214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 30113640 - 30113766
Alignment:
Q  8 cgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctta 107  Q
    ||||| || ||| ||||||||||||  |||| ||||||||| || |||||||| | | |||||||||||||||||||   ||||||||||| |||  |||    
T  30113640 cgatataatttttctttcaacttaatcggta-tttcttatcacataaaacacctgcgactcttctccatttcaaccatttagcttgaatacaatgattta 30113738  T
Q  108 catctgcttc-tatttctccgtcatttt 134  Q
    |||||||||| | |||||||||||||||    
T  30113739 catctgcttcttttttctccgtcatttt 30113766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 25985334 - 25985201
Alignment:
Q  53 aaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagat 152  Q
    |||||||  ||||| || |||||||||||| |||||  ||| || | |||| |||||||| ||||||||||||| |  |||||||| |  || |||| ||    
T  25985334 aaaacacttgaggcactcctccatttcaactacccattttggattcaatggtttacatctccttctatttctccatatttttgtactatagatccaatat 25985235  T
Q  153 atttaaaccgtgtaact--tggtatgatatgatc 184  Q
    |||||||||||||||||  |||||||||||||||    
T  25985234 atttaaaccgtgtaacttgtggtatgatatgatc 25985201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 13589251 - 13589138
Alignment:
Q  36 gtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttg 135  Q
    |||||||||||| ||| |||||||   |||||||||||||||||||||| ||| |||||||| | ||  || ||| ||||||||||||| | |||||||     
T  13589251 gtactttcttatagcataaaacacatcaggctcttctccatttcaaccatccaccttgaatatggtgattttcatatgcttctatttcttcatcatttta 13589152  T
Q  136 tacgaaggacccaa 149  Q
    ||| || |||||||    
T  13589151 tactaacgacccaa 13589138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 18849628 - 18849741
Alignment:
Q  66 ctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgt 165  Q
    ||||| ||||||||||||||||||||||     ||||  |||||| ||||||||||||||||||| ||| ||| ||       |||||||||||||||||    
T  18849628 ctcttatccatttcaaccacccagcttg-----gatgatttacatttgcttctatttctccgtcactttatactaa-------agatatttaaaccgtgt 18849715  T
Q  166 aactt--ggtatgatatgatctccaa 189  Q
    |||||  |||||||||||||||||||    
T  18849716 aacttggggtatgatatgatctccaa 18849741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 10824546 - 10824609
Alignment:
Q  23 ttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacc 86  Q
    ||||||||||  |||| |||| |||| || |||||||| ||| |||||||||||||||||||||    
T  10824546 ttcaacttaactggtattttcgtatcacataaaacacctgagactcttctccatttcaaccacc 10824609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 35601799 - 35601686
Alignment:
Q  45 tatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaagga 144  Q
    |||| ||||||||||  |||  ||||||||||||| | ||||||  |||||| ||||   |||||||| | |||||||||| |||||||||||  | |||    
T  35601799 tatcacacaaaacacttgagagtcttctccatttctatcacccaa-ttgaattcgataatttacatctacgtctatttctctgtcattttgtattatgga 35601701  T
Q  145 cccaagatatttaaa 159  Q
     ||||||||||||||    
T  35601700 tccaagatatttaaa 35601686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 42493812 - 42493866
Alignment:
Q  75 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtc 129  Q
    |||| ||||||||||||| ||| | |||| |||||||| ||||||||||||||||    
T  42493812 attttaaccacccagcttaaattccatggtttacatctccttctatttctccgtc 42493866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 30748273 - 30748232
Alignment:
Q  71 ctccatttcaaccacccagcttgaatacgatggcttacatct 112  Q
    |||||||||||||||| ||||||||| |||||| ||||||||    
T  30748273 ctccatttcaaccacctagcttgaattcgatggtttacatct 30748232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 31312 - 31008
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  31312 ctgttcgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatg 31213  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatc-------------tcc 187  Q
    || ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||             |||    
T  31212 gcctacatctacttttatttctccgtcattttgtacgaaggacccaagatgtttaaaccgtgtaacttggggtatgatatgatctccaactttcacttcc 31113  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  31112 aaggtagacctacttctccttccgctgaagttacattccatatactcagtcttgcttctactcaagcggaatccatacacttctaaggcttgcctccagg 31013  T
Q  288 tctct 292  Q
    |||||    
T  31012 tctct 31008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 7 - 292
Target Start/End: Original strand, 12040 - 12340
Alignment:
Q  7 ccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggctt 106  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||| |||||||||||||    
T  12040 ccgataaaactttccttttaacttaagaggtactttcttatcgcacaaaacacttgaggttcttctccatttcaacgacccagcttaaatacgatggctt 12139  T
Q  107 acatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctcc-------------aagg 191  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||  |||||||||||||||||             ||||    
T  12140 acatatgcttctatttctccgtcattttgtactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcaccgcgaagg 12239  T
Q  192 tagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctc 291  Q
    |||||||||||||||||  ||||||||||||||| ||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  12240 tagacctacttctccttttgctgaagttacattctatataatccgtcttacttctactcaagcggaaaccatacgcttctaaggcttgcctctaggtctc 12339  T
Q  292 t 292  Q
    |    
T  12340 t 12340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 7e-89; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 3 - 292
Target Start/End: Complemental strand, 9706620 - 9706316
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  9706620 ctgttcgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgatgctcttctccatttcaaccacccagcttgaatacgatg 9706521  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatg-------------atctcc 187  Q
      ||||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||  |||||||||||             ||||||    
T  9706520 atttacacctgcttctatttctccatcattttgtaccatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctcc 9706421  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||| ||| ||||||||||  ||||||||||||||||||||||||| |||||||| |||||| |||| | |||||| |||||||||||||||||||||    
T  9706420 aaggtatacccacttctccttttgctgaagttacattccatatactccatcttgcttctactcaggcgggaaccatactcttctaaggcttgcctccagg 9706321  T
Q  288 tctct 292  Q
    |||||    
T  9706320 tctct 9706316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 5258589 - 5258892
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||     
T  5258589 tgtccgatagaactttcctttcagcttaagtggtactttctcatcgcaaaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgatga 5258688  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatc-------------tcca 188  Q
      |||||| |||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||  ||||||||||||||             ||||    
T  5258689 tgtacatcagcttctatttctccgtcattttgtactatggacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacttcca 5258788  T
Q  189 aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggt 288  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||  ||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  5258789 aggtagacccacttctccttttgctgaagttacattccatatactttgtcttgcttctactcaggcggaagccatacgcttctaaggcttgcctccaggt 5258888  T
Q  289 ctct 292  Q
    ||||    
T  5258889 ctct 5258892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 5631661 - 5631358
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  5631661 tgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacccgagactcttctccatttcaaccacccagcttgaatacgatga 5631562  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggaccc-aagatatttaaaccgtgtaactt--ggtatgatatgatctc-------------c 187  Q
     |||||||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||  ||||||||||||||||             |    
T  5631561 tttacatctgcttctatttctccgtcattttgtactatggacccaaaaatatttaaaccgtgtaacttggggtatgatatgatctctaactttcacctgc 5631462  T
Q  188 aaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccagg 287  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||  ||||||||| |||||| |||||| |||||| |||||||||||||||| ||||    
T  5631461 aaggtagacccacttctccttttgctgaagttacattccatatactttgtcttgcttctactcatgcggaaaccatactcttctaaggcttgcctacagg 5631362  T
Q  288 tctc 291  Q
    ||||    
T  5631361 tctc 5631358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 10100293 - 10100599
Alignment:
Q  1 tactgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  10100293 tactgtccgatagaactttcctttcaacttaagtggtactttcttatctcacaaaacacatgaggctcttctccattccaaccacccagcttgaatacga 10100392  T
Q  101 tggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgat-------------ct 185  Q
    ||  ||| ||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||  |||||||||||||             ||    
T  10100393 tgatttatatcagcttctatttctccgacattttgtactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 10100492  T
Q  186 ccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctcca 285  Q
    |||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||  |||||     
T  10100493 ccaaggtagacctacttctcattttgctaaagttacattccatatactccgtcttgcttctactcaggcggaaaccatatgcttctaaggctcacctcct 10100592  T
Q  286 ggtctct 292  Q
    |||||||    
T  10100593 ggtctct 10100599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 3 - 283
Target Start/End: Original strand, 20428074 - 20428370
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20428074 ctgtccaatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttggatacgatg 20428173  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctcca------------ 188  Q
      |||||||||||||||||| |||||| ||||||||   |||||||| |||||||||||| ||||||  |||||||||||||||||||                
T  20428174 atttacatctgcttctatttttccgtcgttttgtactgtggacccaatatatttaaaccgcgtaacttgtggtatgatatgatctccaactttcacctcc 20428273  T
Q  189 -aggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactca-agcggaatccatacgcttctaaggcttgcctc 283  Q
     ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||||||||||||||||||||    
T  20428274 taggtagacctaattctccttttgctgaagttacattccatatactccgtcttgcttccactcatggcgaaaaccatacgcttctaaggcttgcctc 20428370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 292
Target Start/End: Complemental strand, 33496025 - 33495747
Alignment:
Q  19 tcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttct 118  Q
    |||||| |||||||| |||||||||||||| ||||||||| | ||| ||||||||||||||||||| |||||||||||| ||||  |||||| |||||||    
T  33496025 tcctttaaacttaagtggtactttcttatcacacaaaacatctgagactcttctccatttcaaccatccagcttgaatatgatgagttacatatgcttct 33495926  T
Q  119 atttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact-tggtatgatatgat-------------ctccaaggtagacctacttct 204  Q
    |||||||||| ||||||||| | |||||||||||         ||||||||  |||||||||||||             |||||||||||||||||||||    
T  33495925 atttctccgttattttgtactatggacccaagat---------gtgtaactagggtatgatatgatcttcaactttcacctccaaggtagacctacttct 33495835  T
Q  205 ccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctct 292  Q
    ||||  | |||||||||||||||||||||| ||||||||| |||||| |||||| |||||||||| ||||| ||| ||||| ||||||    
T  33495834 ccttttgatgaagttacattccatatactctgtcttgcttctactcaggcggaaaccatacgcttttaaggtttgactccaagtctct 33495747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 2689500 - 2689313
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||| |||||||||||||||||||||  || |||||||||| ||||||| ||  ||||| |||||||||||||| || ||||||||| |||||||    
T  2689500 ctgtccgattgaactttcctttcaacttaagtagtgctttcttatcacacaaaatacatgaggcacttctccatttcaatcatccagcttgactacgatg 2689401  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctcca 188  Q
      ||||||||| ||||||||||||||| |||||||| |  ||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  2689400 atttacatctgattctatttctccgtcgttttgtactatagacccaaaatatttaaaccgtgtaacttagggtatgatatgatctcca 2689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 608003 - 607904
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||| ||||||  ||||| |||  | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  608003 ctgtccgatagaacttttctttcagtttaagtggtcatgtcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 607904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 30679317 - 30679220
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgat 101  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||| |||||||| |||||||||||||| ||||||||||||    
T  30679317 tgtctgatagaactttcctttcaacttatgtggtactttcttatcgctcaaaacacctgagcctcttctctatttcaaccacccaacttgaatacgat 30679220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 14030649 - 14030558
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaa 95  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||    
T  14030649 tgtccgatagaactttcatttcagcttaagtggtactttcttatcgcacaaaacacctgagactattctccatttcaaccacccagtttgaa 14030558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 30670536 - 30670428
Alignment:
Q  184 ctccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctc 283  Q
    |||||||||| ||||||||||||||  ||| ||| ||||||| |||||||||||||||||| | |||||||| || |||||||||| |||||||||||||    
T  30670536 ctccaaggtatacctacttctccttttgctaaagatacattctatatactccgtcttgcttcttctcaagcgaaaaccatacgcttataaggcttgcctc 30670437  T
Q  284 caggtctct 292  Q
     ||||||||    
T  30670436 taggtctct 30670428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 6056209 - 6056337
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    |||||||||||| | ||||||||||||||  | || |||||||||||| |||||||  || |||||||| ||||||||||||||| ||||  ||||||      
T  6056209 tgtccgatagaattatcctttcaacttaaatgatattttcttatcgcataaaacacttgaagctcttctacatttcaaccacccaacttgcctacgatat 6056308  T
Q  104 cttacatctgcttctatttctccgtcatt 132  Q
     |||||| ||||||||||||| |||||||    
T  6056309 tttacatatgcttctatttcttcgtcatt 6056337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 26291587 - 26291444
Alignment:
Q  39 ctttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtac 138  Q
    |||||||||| || |||| ||  |||| | |||| ||||||||||| ||| |||||||||| ||  || | | ||||||||||||||| ||||||| |||    
T  26291587 ctttcttatcacataaaatacatgaggttattctacatttcaaccatccaacttgaatacgttgatttgcgtatgcttctatttctccatcattttctac 26291488  T
Q  139 gaaggacccaagatatttaaaccgtgtaactt--ggtatgatat 180  Q
     | |||| |||||||||||||| |||||||||  ||||||||||    
T  26291487 tatggactcaagatatttaaacggtgtaacttagggtatgatat 26291444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 2065195 - 2065294
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacaccc-gaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    |||||||||||| |||||||||||||||||  |||||||||||||  | |||||||||  || ||||| ||||||||||| || || |||||||||||||    
T  2065195 tgtccgatagaagtttcctttcaacttaagatgtactttcttatcaaataaaacacccaaagtctcttttccatttcaacaacacatcttgaatacgatg 2065294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 6641881 - 6641983
Alignment:
Q  36 gtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttg 135  Q
    |||||||| |||| || |||||||||||||   | |||||||||||||||||| ||| ||| | |||| |||||||| ||||||||||||  ||||||||    
T  6641881 gtactttcatatcacataaaacacccgaggtcatcctccatttcaaccacccaactttaattcaatggtttacatctccttctatttctctctcattttg 6641980  T
Q  136 tac 138  Q
    |||    
T  6641981 tac 6641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 27790999 - 27790831
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||| |||||| ||||||||  |||| || || | | ||||||| |  |||||||  |||||||||||| ||||||||||| || ||| | || ||||     
T  27790999 tgtccaatagaattttcctttacactttagaggcaatatcttatcacgtaaaacacttgaggctcttctctatttcaaccactcaactttattatgatga 27790900  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg 172  Q
     ||| |  ||||||||||| | ||||||||||||| | ||| |||||||||||||||| ||||| ||||    
T  27790899 tttagacttgcttctatttatgcgtcattttgtactatggatccaagatatttaaaccatgtaatttgg 27790831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 12134339 - 12134421
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacc 86  Q
    |||| ||||| || || |||||||||||| | ||||||||| |||| |  ||||||| |||||||| |||||||||||||||||    
T  12134339 ctgttcgataaaatttccctttcaactta-gtggtactttcgtatcacttaaaacactcgaggctcctctccatttcaaccacc 12134421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 2708 - 2960
Alignment:
Q  3 ctgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2708 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 2807  T
Q  103 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg--tatgatatgatctccaag---------- 190  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||               
T  2808 acttacatctgcttctatttcttcgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 2907  T
Q  191 ---gtagacctacttctccttccgctgaagttacattccatatactccgtctt 240  Q
       ||||||  ||||||||||||||||||||||||||||||||| | ||||||    
T  2908 aatgtagactgacttctccttccgctgaagttacattccatatatttcgtctt 2960  T

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Target: scaffold0024 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 82564 - 82377
Alignment:
Q  4 tgtccgatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 103  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||  ||||| ||||||||||||||||||||||||     
T  82564 tgtccgatagaactttcctttcaacttaaggagtactttcttatcgcacaaaacacatgaggctctttcccattgcaaccacccagcttgaatacgatga 82465  T
Q  104 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaact--tggtatgatatgatctccaa 189  Q
     |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  82464 tttacatctgcttctatttctccgtcattttttactatggacccaagatatttaaaccgtgtaacttgtggtatgatataatctccaa 82377  T

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Target: scaffold1493 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 29 - 156
Alignment:
Q  9 gatagaactttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaacca--cccagcttgaatacgatggctt 106  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| ||  ||| ||||| ||||||||  ||    
T  29 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccccctgcttgcatacgatgattt 128  T
Q  107 acatctgcttctatttctccgtcatttt 134  Q
    |||| |||||||||||| ||||||||||    
T  129 acatatgcttctatttccccgtcatttt 156  T

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Target: scaffold0045 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 87061 - 87204
Alignment:
Q  17 tttcctttcaacttaaggggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgctt 116  Q
    |||| |||||||||||| | ||||||||||| ||| ||||| ||||||||| |||||||||||||||| | | | |||||| ||||  ||||||||| ||    
T  87061 tttcttttcaacttaagtgatactttcttattgcataaaacccccgaggcttttctccatttcaaccatcaaacatgaatatgatgagttacatctgatt 87160  T
Q  117 ctatttctccgtcattttgtacgaaggacccaagatatttaaac 160  Q
    ||||||||||| |||||| ||| | |||||||||||||||||||    
T  87161 ctatttctccgacattttatactatggacccaagatatttaaac 87204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 88555 - 88665
Alignment:
Q  182 atctccaaggtagacctacttctccttccgctgaagttacattccatatactccgtcttgctt-------ttactcaagcggaatccatacgcttctaag 274  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||        |||||| | |||| |||||||||||||||    
T  88555 atctccaaggtaaacctacttctccttttgctgaagttacattccatatactctgtcttgcttcctctacgtactcatgtggaaaccatacgcttctaag 88654  T
Q  275 gcttgcctcca 285  Q
    |||||||||||    
T  88655 gcttgcctcca 88665  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 5897 - 5848
Alignment:
Q  142 ggacccaagatatttaaaccgtgtaactt--ggtatgatatgatctccaa 189  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  5897 ggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaa 5848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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