View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1345_high_187 (Length: 282)
Name: NF1345_high_187
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1345_high_187 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 31929390 - 31929628
Alignment:
| Q |
16 |
ataaggtgggaaaaggaatgctctaataattgaccgttcttgtgggtattgtgaagttctttatgggcccatattgagaggtttaggacataaggcaaca |
115 |
Q |
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| T |
31929390 |
ataaggtggaaaaagtaatgctctaataattgaccgttcttgtgggtattgtgaagttctttatgggcccatattgagaggtttaggacataaggcaaca |
31929489 |
T |
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| Q |
116 |
taagaaaattgctttttagactaaacgttttgctatggcatacatgtaaatgacattcaatatccgcaactgtagttaactacacttcattgtttaannn |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
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| T |
31929490 |
taagaaaattgctttttagactaaacgttttgctatggcatacatgtaaatgacatttaatatccgcaactgtagttaactacacttcattgcttaattt |
31929589 |
T |
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| Q |
216 |
nnnnggaacgaacggtagttaactaccgttaaagtattt |
254 |
Q |
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||| ||||||||| ||||||| ||||||||||||| |
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| T |
31929590 |
ttttggagcgaacggtaattaactatcgttaaagtattt |
31929628 |
T |
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