View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1345_high_210 (Length: 257)
Name: NF1345_high_210
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1345_high_210 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 35122387 - 35122539
Alignment:
| Q |
9 |
aagataagatacattaagaatttaatttgttagttaccataaggatattctttgcgccttctcttctgaacctcaacataatctcccggtttcaaattat |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35122387 |
aagataagatacattaagaatttaatttgttagttaccataaggatattctttgcgccttctcttctgaacctcaacataatctcccggtttcaaattat |
35122486 |
T |
|
| Q |
109 |
tgatataattaggtttataatagtcagataaaaaagtctgaggtggtggtatt |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35122487 |
tgatataattaggtttataatagtcagataaaaaagtctgaggtggtggtatt |
35122539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University