View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1345_high_273 (Length: 201)
Name: NF1345_high_273
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1345_high_273 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 33422624 - 33422795
Alignment:
| Q |
5 |
cacatggctacaggactacaagtgggccaaaaccatattcaaagccattatctaaaccgacaaaagacaagtgacaatgctttcatgagtagtaattaaa |
104 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33422624 |
cacatggctacaggactacaagtgggccaaaaccatattcaaagccattatctaaaccgacaaaagacaagtgacaatgctttcatgagtagtaattaaa |
33422723 |
T |
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| Q |
105 |
tctttacactttgtgacaagtgatttgcagattaggtaattaacctttacactttgtgaattcatctcactc |
176 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
33422724 |
tctttacactttgtgacaagtgatttgcagattaggtaattaacctttacactttgtgaattcatttcactc |
33422795 |
T |
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