View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1345_high_71 (Length: 464)
Name: NF1345_high_71
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1345_high_71 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 29 - 458
Target Start/End: Original strand, 36314700 - 36315129
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36314700 |
acaataatgtactgatacatatgttgaacattcactggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttcccgcgtt |
36314799 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314800 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgacgtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
36314899 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
36314900 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtaa |
36314999 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgac |
428 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36315000 |
agttgttgaagcaaaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgac |
36315099 |
T |
|
| Q |
429 |
attctattttgagcacaccagaataatcta |
458 |
Q |
| |
|
||||||||||||| |||||||| ||||||| |
|
|
| T |
36315100 |
attctattttgagaacaccagagtaatcta |
36315129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 279; Significance: 1e-156; HSPs: 31)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 29 - 450
Target Start/End: Original strand, 19504106 - 19504530
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||||||||||||||| ||| ||||||| || | |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| || |
|
|
| T |
19504106 |
acaataatgtactgatatatacgttgaacttttgtgggaatgttctcgaatattccattgcttttaagttttccgcttttccaatgcactttgccgcttt |
19504205 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
| | ||||||||||||| || ||||||||||||| |||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19504206 |
tccttatgttcaattcacgttcttttggttcccatacaagactaaatttacctggagttggtagcgaaggagtcaaccatgaaaccaatgaccaattatg |
19504305 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19504306 |
tcctgtttttcgattaactcccaacttcatcgttgagatcaaaatgtatgttggataatcaaaactctgccataatatactctttgtcccatttgggtga |
19504405 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatctt |
425 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||||||| |||| ||||||||| |||||| ||||||| || |
|
|
| T |
19504406 |
agttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaagagtaaatgattattggtaaattcctatttt |
19504505 |
T |
|
| Q |
426 |
gacattctattttgagcacaccaga |
450 |
Q |
| |
|
|| |||||||||||||||||||||| |
|
|
| T |
19504506 |
gaaattctattttgagcacaccaga |
19504530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 29 - 458
Target Start/End: Complemental strand, 19345237 - 19344808
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||| | |||||||||||||| ||||||||||| ||||||||||| |||||||||||| || |||||| || |
|
|
| T |
19345237 |
acaataatgtactgatatatacgttgaactttcgtgggaatgttctcgaatattccattgctattaagttttccgcttttccaatacgctatgccgcttt |
19345138 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
19345137 |
tcttgatgttcaattcaccttcttttggttcccattcaagactaaattcacctggagttggtagcgaaggagtcatccatgaaaccaatgaccaattatg |
19345038 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
19345037 |
tccagtttttcgattaactcccaacttcatcgttgggatcaaagtgtgatcgggataatcaaaactctgccataataaactatttgtcccatttgggtga |
19344938 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgac |
428 |
Q |
| |
|
| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||| | ||||||||| ||||||||||||| || |
|
|
| T |
19344937 |
aattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatgggttgaggtgacgagtaaatgattattggtttcctattttatg |
19344838 |
T |
|
| Q |
429 |
attctattttgagcacaccagaataatcta |
458 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
19344837 |
attctattttgagcacaccagaataatcta |
19344808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 29 - 449
Target Start/End: Complemental strand, 19390651 - 19390239
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||||||||| ||||| ||| |||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19390651 |
acaataatgtattgatatatacgttgaacattcaccggaatgttctcgaataaaccattgcttttaagttttccgcttttccaatacactttgccgcgtt |
19390552 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||| || | |||||||||||||||||| |
|
|
| T |
19390551 |
tcttgatgttcaattccccttgttttggttcccattcaagactaaattcacctggagttggtagcgaagaagcc--------aaccaatgaccaattatg |
19390460 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
19390459 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaagtgtcgtcgggataatcaaaactctgccataataaactctttgtaccatttgggtga |
19390360 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgac |
428 |
Q |
| |
|
| || |||||||||||||||||| ||||||| |||||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
19390359 |
aatttttgaagcacaaagttaccggtgtctagcatagttgccatagtgttgtttatgggttgaggtgaagagtaaatgattattggtttcctattttgag |
19390260 |
T |
|
| Q |
429 |
attctattttgagcacaccag |
449 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
19390259 |
attctattttgagcacaccag |
19390239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 29 - 450
Target Start/End: Complemental strand, 19376685 - 19376264
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19376685 |
acaatgatgtaccgatacatattttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19376586 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| || |||||||||||||||| |
|
|
| T |
19376585 |
tcttgatgttcagttcaccttgttttggttcccactcaagactaaattcacctgaagttgtccgcgaaggagtcaaccaggacaccaatgaccaattata |
19376486 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||| || || |||||||||||||||||||| || | | |||||| |||||| || ||| |
|
|
| T |
19376485 |
tcctgtttttcgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataatcaaaactctgccacaaaacagtctttgacccattgggatga |
19376386 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgac |
428 |
Q |
| |
|
| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| | ||||||||||||| ||||||||| ||||||||||||| ||| |
|
|
| T |
19376385 |
aattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttattggttgaggtgaagagtaaatgattattggtttcctattttgtg |
19376286 |
T |
|
| Q |
429 |
attctattttgagcacaccaga |
450 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
19376285 |
attctattttgagcacaccaga |
19376264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 28 - 450
Target Start/End: Complemental strand, 19337522 - 19337097
Alignment:
| Q |
28 |
cacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgt |
127 |
Q |
| |
|
||||||||||||||| || ||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | | |
|
|
| T |
19337522 |
cacaataatgtactggtatatacgttgaactttcgcaggaatgttctcgaacattccattgcttttgagttttccacttttccaatgcactttgccactt |
19337423 |
T |
|
| Q |
128 |
tttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||| || ||| ||||| |||||||||||||||||||| |
|
|
| T |
19337422 |
ttcctgatgttcaattcaccttcttttggttcccattcaagactaagttcacctggagttggtagcgaatgagccaaccgtgaaaccaatgaccaattat |
19337323 |
T |
|
| Q |
228 |
gtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtg |
327 |
Q |
| |
|
|||||||||| |||||||| || |||||||||||||| | |||| || | |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19337322 |
gtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatatactctttgtcccatttgggtg |
19337223 |
T |
|
| Q |
328 |
aagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatct |
424 |
Q |
| |
|
||| ||||||||||| |||||||| ||||||||||||||||||||||||| |||| | |||||||| ||| |||||||| |||||| ||||||| | |
|
|
| T |
19337222 |
aagctgttgaagcacgaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatgataattggtacattcctattt |
19337123 |
T |
|
| Q |
425 |
tgacattctattttgagcacaccaga |
450 |
Q |
| |
|
||| ||||||||||||| |||||||| |
|
|
| T |
19337122 |
tgaaattctattttgagtacaccaga |
19337097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 28 - 450
Target Start/End: Complemental strand, 19355542 - 19355117
Alignment:
| Q |
28 |
cacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgt |
127 |
Q |
| |
|
||||||||||||| |||| ||| |||||| ||| ||||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||||||||| | |
|
|
| T |
19355542 |
cacaataatgtaccgatatatactttgaactttcgctggaatgttctcgaatattccattacttctaagttttccgcttttccaatgcactttgccgctt |
19355443 |
T |
|
| Q |
128 |
tttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattat |
227 |
Q |
| |
|
|| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || || ||| ||||| |||||||||||||||||||| |
|
|
| T |
19355442 |
ttccttatgttcaattcaccttcttttggttcccattcaagactaaattcacctgaagttggtcgcgaatgagccaaccgtgaaaccaatgaccaattat |
19355343 |
T |
|
| Q |
228 |
gtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtg |
327 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||| | ||| ||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19355342 |
gtcctgtttttcgattaacacctaacttcatcgttgggatcaaactatctgttggatagtcaaaactctgccatagtatactctttgtcccatttgggtg |
19355243 |
T |
|
| Q |
328 |
aagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatct |
424 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||| ||| || |||||||| || ||| ||||||| | |
|
|
| T |
19355242 |
aagttgttgaagcacaaagttacctgtgtctaacatagtggccacagtgtcgttggttggttcaggcaaataataaatgataatcggtacattcctattt |
19355143 |
T |
|
| Q |
425 |
tgacattctattttgagcacaccaga |
450 |
Q |
| |
|
||| |||||||||||||||||||||| |
|
|
| T |
19355142 |
tgaaattctattttgagcacaccaga |
19355117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 29 - 458
Target Start/End: Original strand, 19172864 - 19173290
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||||||||| ||||||| ||||||||| |||| | ||||||||| ||| | ||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19172864 |
acaataatgtattgatacacatgttgaactttcactagaatgttcttgaataatccattgctgttaagttttccgcttttccaatacactttgccgcgtt |
19172963 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | ||||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
19172964 |
gcttgatgttcaattcaccttccattggttcccattcaacactaaatccacctgaattcggtagcgaaggagccaaccacgaaaccaatgaccaattatg |
19173063 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
||| |||||||| ||||| || ||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| || |||| | |
|
|
| T |
19173064 |
tccggtttttcggttaacacctaacttcatcgttgggatcaaagtggttatgggataatcaaaactctgccataatatactctttgtcccgttggggtaa |
19173163 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgac |
428 |
Q |
| |
|
| |||| |||||||||||||||| |||||||| |||||||||| || |||| ||||||||||||||| | | ||||| ||||||||||||| ||| |
|
|
| T |
19173164 |
atttgtcgaagcacaaagttacctgtgtctaatatagtggccaaag---tgtttatgggttgaggtgaagagcatatgattattggtttcctattttgtg |
19173260 |
T |
|
| Q |
429 |
attctattttgagcacaccagaataatcta |
458 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
19173261 |
attgtattttgagcacaccagaataatcta |
19173290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 450
Target Start/End: Complemental strand, 19287782 - 19287358
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||||||||| ||||||| | ||||||| |||| ||||||||||||||| | ||||||| | || ||||||| ||||||||||||||||||||||||| |
|
|
| T |
19287782 |
acaataatgtattgatacacacgttgaactttcactggaatgttctcgaataaaccattgcgtctacgttttccgcttttccaatacactttgccgcgtt |
19287683 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| || ||||| || ||| ||||||||||||||| ||||||||||| |
|
|
| T |
19287682 |
gcttgatgttcaattcaccttctttaggttcccattcaagactaaatccacctgaatttggtagcgaatgagccaaccatgaaaccaacgaccaattatg |
19287583 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
||| |||||||| ||||| || |||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19287582 |
tccggtttttcggttaacacctaacttcattgttgggatcaaagtggctgtgggataatcaaaactctgccataatatattctttgtcccatttgggtga |
19287483 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattgg---tttcctatctt |
425 |
Q |
| |
|
| || |||||||||||||||||| ||||||||||||||||| ||||| || ||| | || ||||| |||| ||||||||| || || |||||||| || |
|
|
| T |
19287482 |
attttttgaagcacaaagttaccggtgtctaacatagtggcgacagtattattggtcggatgaggcgaagagtaaatgataatcggtaatttcctatttt |
19287383 |
T |
|
| Q |
426 |
gacattctattttgagcacaccaga |
450 |
Q |
| |
|
|| |||||||||||||||||||||| |
|
|
| T |
19287382 |
gagattctattttgagcacaccaga |
19287358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 29 - 447
Target Start/End: Complemental strand, 19404816 - 19404398
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||| |||| ||||||||| ||||||||| ||||| |||||||| | ||||| ||||||||||||||| |||||||||||||||||||| | || |
|
|
| T |
19404816 |
acaatagtgtattgatacatagtttgaacattggccggaatattctcgaataatccatcgcttttaagttttccgcttttccaatacactttgcctcttt |
19404717 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| || | || ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
19404716 |
tcttgatgttcagttcaccttgttttggttcccactcaagactaaatttacctgaatttggccgcgaaggagttaaccatgacaccaatgaccaattatg |
19404617 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||||||||||||| || || || ||||||||||||||||| || | | |||||| |||||| |||||| |
|
|
| T |
19404616 |
tgctgtttttcgattaactcctaacttcatcgttgggatcaaaacgtctgatgggtaatcaaaactctgccacaacacagtctttgacccattggggtga |
19404517 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgac |
428 |
Q |
| |
|
| |||| |||||||||||||||| |||||||| ||||| |||| ||||||||| ||||||||||||||| |||||||| |||||||||||| ||| |
|
|
| T |
19404516 |
aattgtcgaagcacaaagttacctgtgtctaatatagtagccaaagtgttgtttatgggttgaggtgaagaataaatgataattggtttcctactttgtg |
19404417 |
T |
|
| Q |
429 |
attctattttgagcacacc |
447 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
19404416 |
attctattttgagcacacc |
19404398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 208 - 450
Target Start/End: Original strand, 19469728 - 19469973
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || |||||||||||| |||||||||||||||||| |
|
|
| T |
19469728 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19469827 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19469828 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19469927 |
T |
|
| Q |
408 |
tcattgg---tttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
19469928 |
ttattggtaatttcctattttgagattctattttgagcacaccaga |
19469973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 208 - 450
Target Start/End: Original strand, 19540652 - 19540897
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || |||||||||||| |||||||||||||||||| |
|
|
| T |
19540652 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19540751 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19540752 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19540851 |
T |
|
| Q |
408 |
tcattgg---tttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
19540852 |
ttattggtaatttcctattttgagattctattttgagcacaccaga |
19540897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 208 - 450
Target Start/End: Complemental strand, 19592046 - 19591801
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || |||||||||||| |||||||||||||||||| |
|
|
| T |
19592046 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19591947 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19591946 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19591847 |
T |
|
| Q |
408 |
tcattgg---tttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
19591846 |
ttattggtaatttcctattttgagattctattttgagcacaccaga |
19591801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 19448422 - 19448153
Alignment:
| Q |
189 |
gtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatc |
288 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| || || |||||||| |
|
|
| T |
19448422 |
gtagcgaaggagtcaaccatgacaccaatgaccaattatgtcctgttttttgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataatc |
19448323 |
T |
|
| Q |
289 |
aaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggt |
388 |
Q |
| |
|
|||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
19448322 |
aaaactctgccacaacacagtctttgacccattggggtgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatgggt |
19448223 |
T |
|
| Q |
389 |
tgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagaataatcta |
458 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
19448222 |
tgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagcacaccagaataatcta |
19448153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 189 - 458
Target Start/End: Original strand, 19532654 - 19532923
Alignment:
| Q |
189 |
gtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatc |
288 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| || || |||||||| |
|
|
| T |
19532654 |
gtagcgaaggagtcaaccatgacaccaatgaccaattatgtcctgttttttgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataatc |
19532753 |
T |
|
| Q |
289 |
aaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggt |
388 |
Q |
| |
|
|||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
19532754 |
aaaactctgccacaacacagtctttgacccattggggtgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatgggt |
19532853 |
T |
|
| Q |
389 |
tgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagaataatcta |
458 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
19532854 |
tgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagcacaccagaataatcta |
19532923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 208 - 450
Target Start/End: Complemental strand, 19410696 - 19410454
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| || || |||||||||||||||||||| || | | |
|
|
| T |
19410696 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19410597 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19410596 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19410497 |
T |
|
| Q |
408 |
tcattggtttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
19410496 |
ttattggtttcctattttgagattctattttgagcacaccaga |
19410454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 208 - 450
Target Start/End: Complemental strand, 19457715 - 19457473
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| || || |||||||||||||||||||| || | | |
|
|
| T |
19457715 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19457616 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19457615 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19457516 |
T |
|
| Q |
408 |
tcattggtttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
19457515 |
ttattggtttcctattttgagattctattttgagcacaccaga |
19457473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 208 - 450
Target Start/End: Original strand, 19523363 - 19523605
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| || || |||||||||||||||||||| || | | |
|
|
| T |
19523363 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19523462 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19523463 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19523562 |
T |
|
| Q |
408 |
tcattggtttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
19523563 |
ttattggtttcctattttgagattctattttgagcacaccaga |
19523605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 208 - 450
Target Start/End: Original strand, 19468792 - 19469034
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||| | |||| || ||||||||||||||||||||| || | | |
|
|
| T |
19468792 |
tgaaaccaatgaccaattatgtcctgttttccgattaacgcctaacttcatcgttggaaccaaagtgtcatcgggataatcaaaactctgccacaacaca |
19468891 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||| ||| ||||| || |||| |||| |||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||| |||||||| |
|
|
| T |
19468892 |
ctcattgagccattgggatgaaattgtcgaagcacaaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatga |
19468991 |
T |
|
| Q |
408 |
tcattggtttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
19468992 |
ttattggtttcctattttgtgattctattttgagcacaccaga |
19469034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 208 - 450
Target Start/End: Original strand, 19555713 - 19555955
Alignment:
| Q |
208 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||| | |||| || ||||||||||||||||||||| || | | |
|
|
| T |
19555713 |
tgaaaccaatgaccaattatgtcctgttttccgattaacgcctaacttcatcgttggaaccaaagtgtcatcgggataatcaaaactctgccacaacaca |
19555812 |
T |
|
| Q |
308 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
407 |
Q |
| |
|
||| ||| ||||| || |||| |||| |||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||| |||||||| |
|
|
| T |
19555813 |
ctcattgagccattgggatgaaattgtcgaagcacaaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatga |
19555912 |
T |
|
| Q |
408 |
tcattggtttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
| ||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
19555913 |
ttattggtttcctattttgtgattctattttgagcacaccaga |
19555955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 19468640 - 19468795
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19468640 |
acaataatgtactgatacatatgttgaacattcaccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19468739 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaa |
184 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||| || ||| |||||||||||||| |
|
|
| T |
19468740 |
tcttgatgatcaattcaccttgttttggttcccaatctagattaaattcacctgaa |
19468795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 19555561 - 19555716
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19555561 |
acaataatgtactgatacatatgttgaacattcaccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19555660 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaa |
184 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||| || ||| |||||||||||||| |
|
|
| T |
19555661 |
tcttgatgatcaattcaccttgttttggttcccaatctagattaaattcacctgaa |
19555716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 19410848 - 19410701
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||| || ||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19410848 |
acaataatgtactgatacctactttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19410749 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaatt |
176 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19410748 |
tcttgatgttcaattcaccttgttttggttcccattcaagattaaatt |
19410701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 19457867 - 19457720
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||| || ||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19457867 |
acaataatgtactgatacctactttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19457768 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaatt |
176 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19457767 |
tcttgatgttcaattcaccttgttttggttcccattcaagattaaatt |
19457720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 19523211 - 19523358
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||| || ||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19523211 |
acaataatgtactgatacctactttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19523310 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaatt |
176 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19523311 |
tcttgatgttcaattcaccttgttttggttcccattcaagattaaatt |
19523358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 19469576 - 19469723
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19469576 |
acaataatgtactgatacctattttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19469675 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaatt |
176 |
Q |
| |
|
| |||||||||||||| |||| ||||||| ||||||||||| |||||| |
|
|
| T |
19469676 |
tcttgatgttcaattctccttcttttggtccccattcaagattaaatt |
19469723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 19540500 - 19540647
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19540500 |
acaataatgtactgatacctattttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19540599 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaatt |
176 |
Q |
| |
|
| |||||||||||||| |||| ||||||| ||||||||||| |||||| |
|
|
| T |
19540600 |
tcttgatgttcaattctccttcttttggtccccattcaagattaaatt |
19540647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 19592198 - 19592051
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
19592198 |
acaataatgtactgatacctattttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttt |
19592099 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaatt |
176 |
Q |
| |
|
| |||||||||||||| |||| ||||||| ||||||||||| |||||| |
|
|
| T |
19592098 |
tcttgatgttcaattctccttcttttggtccccattcaagattaaatt |
19592051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 312 - 450
Target Start/End: Complemental strand, 19489886 - 19489748
Alignment:
| Q |
312 |
ttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcat |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| ||||||||| || |
|
|
| T |
19489886 |
ttgtcccatttgggtgaagttgttgaatcaccaagttaccggtgtctaacatagtggccaccgtgttgttggtgggttgagttgacaagtaaatgattat |
19489787 |
T |
|
| Q |
412 |
tggtttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
||||||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
19489786 |
tggtttcctattttgtgattctattttgagcgcaccaga |
19489748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 19371028 - 19370913
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||| ||||| |||||| |||||| |||||| ||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
19371028 |
acaatcatgtatcgatacacatgttggacattctctggaatgttctcgaataatccattgcttctaagttttccacttttccaatgcactttgccttgtt |
19370929 |
T |
|
| Q |
129 |
ttttgatgttcaattc |
144 |
Q |
| |
|
| || ||||||||||| |
|
|
| T |
19370928 |
tcttaatgttcaattc |
19370913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 19341248 - 19341133
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||| ||||| |||||| |||||| |||||| | ||||||||||||| | |||||||||| |||||||||||||||||||| ||||||||| ||| |
|
|
| T |
19341248 |
acaatcatgtatcgatacacatgttggacattctctagaatgttctcgaataatccattgcttccaagttttccacttttccaatgcactttgccttgtt |
19341149 |
T |
|
| Q |
129 |
ttttgatgttcaattc |
144 |
Q |
| |
|
| || ||||||||||| |
|
|
| T |
19341148 |
tcttaatgttcaattc |
19341133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 450
Target Start/End: Original strand, 19468140 - 19468205
Alignment:
| Q |
384 |
tgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccaga |
450 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||| || ||| |||||||||||||||||||||| |
|
|
| T |
19468140 |
tgggttgaggtgaagagtaaatgattattggtttcc-attttgtgattctattttgagcacaccaga |
19468205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 29 - 360
Target Start/End: Complemental strand, 19543134 - 19542803
Alignment:
| Q |
29 |
acaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgtt |
128 |
Q |
| |
|
||||||||||| | ||||| | ||||||||||| || |||||| |||| | ||||| ||| |||||||||| |||||||||||||||||||||| || |
|
|
| T |
19543134 |
acaataatgtattcatacacacgttgaacattcgccggtatgttcacgaataacccatttcttctaagttttccgcttttccaatacactttgccgcttt |
19543035 |
T |
|
| Q |
129 |
ttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatg |
228 |
Q |
| |
|
| ||||| | |||||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| || ||||||||||| |
|
|
| T |
19543034 |
tcttgatttccaattcacgttgctttggttcccattcaagactaaattcacctgaagttgatagcgaaggagtcatccatgaaactaaagaccaattatg |
19542935 |
T |
|
| Q |
229 |
tcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtga |
328 |
Q |
| |
|
||| ||| |||| |||| || ||||||||| |||| ||| || ||| | | ||| |||||||||||||||||| | ||| ||| ||||| |||||| |
|
|
| T |
19542934 |
tccggttattcggttaatacctaacttcatcattggaatccaacagtgtaagagatgatcaaaactctgccataaaacacttgttgaaccattggggtga |
19542835 |
T |
|
| Q |
329 |
agttgttgaagcacaaagttacccgtgtctaa |
360 |
Q |
| |
|
| ||||||||| ||||||||||| |||||||| |
|
|
| T |
19542834 |
aattgttgaagaacaaagttaccggtgtctaa |
19542803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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