View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1345_high_83 (Length: 436)
Name: NF1345_high_83
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1345_high_83 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 91 - 358
Target Start/End: Original strand, 40214844 - 40215111
Alignment:
| Q |
91 |
catgaatcatgatgaatagctcaatcatgaaattgcactacatttgaaatcatatattggagcattgctttttatcatctttgatgagaaagaattacta |
190 |
Q |
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| T |
40214844 |
catgaatcatgatgaatagctcaatcatgaaattgcactacatttgaaatcatatattggagcattgctttttatcatctttgatgagaaagaattacta |
40214943 |
T |
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| Q |
191 |
gagacaacttttccaatataaaatcttcacatgtatacgcataaatttgtcaaataataaaaataagaaaacaagtgaacataatgataaaagctattcc |
290 |
Q |
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| T |
40214944 |
gagacaacttttccaatataaaatcttcacatgtatacgcataaatttgtcaaataataaaaataagaaaacaagtgaacataatgataaaagctattcc |
40215043 |
T |
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| Q |
291 |
atgatgagtaacattcaactataagcaaaagatactaataattgaaagtgtgacactgacattttaat |
358 |
Q |
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| T |
40215044 |
atgatgagtaacattcaactataagcaaaagatactaataattgaaagtgtgacactgacattttaat |
40215111 |
T |
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