View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1345_low_301 (Length: 201)
Name: NF1345_low_301
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1345_low_301 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 43195716 - 43195552
Alignment:
| Q |
19 |
aatatccacatttgttaaataagcccataaatatctaaataataattttgttttggtatattgtctaaatcatttctacaaaagtcacatactacgtttt |
118 |
Q |
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| T |
43195716 |
aatatccacatttgttaaataagcccataaatatctaaataataattttattttggtatattgtctaaatcatttctacaaaattcacatactacgtttt |
43195617 |
T |
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| Q |
119 |
tcttgtcctaattaaagtaattttccttgcacctgttaaatgaccttgaccatgcatgttaatga |
183 |
Q |
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| T |
43195616 |
tcttgtcctaaataaagtaattttccttgcacctgttaaatgaccttgaccatgcatgttaatga |
43195552 |
T |
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