View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1345_low_34 (Length: 560)

Name: NF1345_low_34
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1345_low_34
NF1345_low_34
[»] chr6 (27 HSPs)
chr6 (13-240)||(3949331-3949558)
chr6 (13-240)||(25167840-25168067)
chr6 (260-419)||(31976271-31976430)
chr6 (264-419)||(11427641-11427796)
chr6 (264-419)||(32869701-32869856)
chr6 (256-419)||(31952944-31953107)
chr6 (259-419)||(30341277-30341437)
chr6 (256-419)||(15507938-15508101)
chr6 (260-419)||(15989960-15990119)
chr6 (260-419)||(4231571-4231730)
chr6 (264-419)||(17598577-17598732)
chr6 (264-419)||(22880580-22880735)
chr6 (264-415)||(29857854-29858005)
chr6 (260-419)||(31110679-31110836)
chr6 (262-419)||(28536408-28536563)
chr6 (282-411)||(23128067-23128196)
chr6 (264-398)||(15832621-15832755)
chr6 (24-145)||(4263360-4263481)
chr6 (17-145)||(10990025-10990153)
chr6 (258-398)||(12732526-12732665)
chr6 (300-412)||(9379670-9379782)
chr6 (368-419)||(31109426-31109477)
chr6 (300-411)||(946407-946518)
chr6 (300-419)||(6209423-6209542)
chr6 (321-399)||(30870057-30870135)
chr6 (372-416)||(7367672-7367715)
chr6 (372-416)||(26669943-26669986)
[»] chr4 (44 HSPs)
chr4 (13-240)||(37049997-37050225)
chr4 (262-421)||(29977906-29978065)
chr4 (264-412)||(23608265-23608413)
chr4 (259-419)||(50052345-50052505)
chr4 (256-419)||(29239909-29240072)
chr4 (259-419)||(50526088-50526248)
chr4 (264-419)||(6034067-6034222)
chr4 (264-419)||(41236370-41236525)
chr4 (263-394)||(56300086-56300217)
chr4 (258-419)||(31910215-31910376)
chr4 (260-401)||(41823923-41824064)
chr4 (264-416)||(48182971-48183123)
chr4 (260-419)||(50813810-50813969)
chr4 (258-419)||(28480184-28480345)
chr4 (258-419)||(28481059-28481220)
chr4 (258-419)||(28481934-28482095)
chr4 (259-419)||(29547876-29548036)
chr4 (264-419)||(42044289-42044444)
chr4 (257-419)||(17983658-17983820)
chr4 (257-419)||(19670631-19670793)
chr4 (262-419)||(40574802-40574959)
chr4 (257-413)||(29589655-29589811)
chr4 (264-419)||(11511385-11511539)
chr4 (300-419)||(480405-480524)
chr4 (252-419)||(18924405-18924572)
chr4 (264-415)||(24995029-24995180)
chr4 (332-410)||(18769037-18769115)
chr4 (301-398)||(47104588-47104685)
chr4 (255-419)||(47986231-47986394)
chr4 (24-190)||(24239788-24239955)
chr4 (280-419)||(54473471-54473610)
chr4 (260-419)||(55475214-55475373)
chr4 (321-419)||(3481677-3481775)
chr4 (321-410)||(18769141-18769230)
chr4 (66-233)||(18522202-18522369)
chr4 (321-412)||(48647705-48647796)
chr4 (13-193)||(16832082-16832263)
chr4 (302-415)||(29234205-29234318)
chr4 (372-419)||(32766981-32767028)
chr4 (321-419)||(55079692-55079791)
chr4 (13-79)||(19852481-19852547)
chr4 (321-419)||(44536725-44536822)
chr4 (13-79)||(16593826-16593892)
chr4 (321-394)||(29535425-29535497)
[»] chr2 (44 HSPs)
chr2 (13-240)||(37344616-37344843)
chr2 (264-419)||(28863478-28863633)
chr2 (259-419)||(40613819-40613979)
chr2 (264-415)||(7465657-7465808)
chr2 (264-415)||(17473047-17473198)
chr2 (300-420)||(17819962-17820082)
chr2 (12-204)||(31092312-31092505)
chr2 (259-419)||(42257216-42257376)
chr2 (264-419)||(19930742-19930897)
chr2 (260-416)||(20700841-20700997)
chr2 (14-191)||(14296202-14296380)
chr2 (259-416)||(2533150-2533306)
chr2 (271-419)||(33436029-33436177)
chr2 (280-419)||(9058503-9058642)
chr2 (264-419)||(13438366-13438521)
chr2 (282-392)||(3154193-3154303)
chr2 (13-137)||(18811704-18811828)
chr2 (260-412)||(36168866-36169018)
chr2 (264-419)||(10249304-10249459)
chr2 (264-419)||(28381577-28381732)
chr2 (257-419)||(2997402-2997564)
chr2 (300-415)||(38273100-38273215)
chr2 (261-420)||(44151945-44152108)
chr2 (259-419)||(17823807-17823971)
chr2 (264-419)||(30915486-30915641)
chr2 (264-419)||(32505570-32505725)
chr2 (257-412)||(38732384-38732539)
chr2 (264-419)||(40701501-40701656)
chr2 (260-419)||(43490144-43490303)
chr2 (258-419)||(3440002-3440163)
chr2 (339-419)||(5574485-5574565)
chr2 (264-416)||(15428663-15428814)
chr2 (259-415)||(13365380-13365536)
chr2 (259-419)||(45097652-45097812)
chr2 (264-419)||(4060708-4060863)
chr2 (368-419)||(26891530-26891581)
chr2 (20-109)||(8413844-8413933)
chr2 (39-145)||(18693124-18693230)
chr2 (257-358)||(21301415-21301516)
chr2 (374-416)||(27864730-27864772)
chr2 (322-411)||(41575168-41575258)
chr2 (257-388)||(41758639-41758772)
chr2 (372-416)||(16096871-16096914)
chr2 (372-416)||(42849793-42849836)
[»] chr5 (34 HSPs)
chr5 (255-427)||(6259914-6260086)
chr5 (48-240)||(32278607-32278794)
chr5 (261-419)||(6679721-6679879)
chr5 (258-419)||(26720539-26720700)
chr5 (258-419)||(26990288-26990449)
chr5 (264-419)||(18520806-18520961)
chr5 (13-183)||(788228-788398)
chr5 (264-419)||(2740297-2740452)
chr5 (300-426)||(39557475-39557601)
chr5 (303-419)||(28177798-28177914)
chr5 (264-419)||(14831837-14831992)
chr5 (272-419)||(36732872-36733019)
chr5 (264-419)||(40145430-40145585)
chr5 (258-419)||(3921181-3921342)
chr5 (259-419)||(2252085-2252245)
chr5 (260-419)||(15409528-15409687)
chr5 (264-419)||(33149560-33149715)
chr5 (262-419)||(35943812-35943969)
chr5 (12-191)||(35811126-35811305)
chr5 (259-398)||(31009032-31009171)
chr5 (264-419)||(35785222-35785377)
chr5 (269-419)||(13811675-13811825)
chr5 (15-149)||(36868291-36868425)
chr5 (302-419)||(16327924-16328041)
chr5 (261-419)||(33825243-33825401)
chr5 (12-145)||(19215378-19215511)
chr5 (321-419)||(42414281-42414379)
chr5 (325-419)||(38296226-38296320)
chr5 (259-416)||(39688814-39688971)
chr5 (321-411)||(9603844-9603934)
chr5 (260-398)||(21370048-21370186)
chr5 (86-202)||(37307134-37307251)
chr5 (352-416)||(33801572-33801635)
chr5 (383-419)||(36875644-36875680)
[»] chr3 (50 HSPs)
chr3 (255-419)||(26141443-26141609)
chr3 (260-427)||(25407065-25407233)
chr3 (264-419)||(49607437-49607592)
chr3 (256-419)||(20764829-20764992)
chr3 (251-419)||(33118759-33118928)
chr3 (264-419)||(53982034-53982189)
chr3 (257-415)||(47531892-47532050)
chr3 (264-417)||(33644225-33644378)
chr3 (21-204)||(29346803-29346987)
chr3 (257-419)||(13897970-13898132)
chr3 (257-419)||(41189679-41189841)
chr3 (258-412)||(51419276-51419430)
chr3 (259-419)||(8076416-8076576)
chr3 (260-419)||(11347840-11347999)
chr3 (260-419)||(14623757-14623916)
chr3 (251-419)||(26754718-26754886)
chr3 (264-419)||(17470428-17470583)
chr3 (16-193)||(35526503-35526681)
chr3 (264-421)||(31456710-31456867)
chr3 (260-419)||(36331247-36331406)
chr3 (264-419)||(52629323-52629478)
chr3 (257-415)||(24699870-24700027)
chr3 (257-416)||(35536652-35536811)
chr3 (264-419)||(54868817-54868972)
chr3 (257-411)||(30801648-30801802)
chr3 (15-137)||(51524866-51524988)
chr3 (256-421)||(1758373-1758537)
chr3 (27-140)||(16893088-16893201)
chr3 (264-419)||(36707350-36707501)
chr3 (262-419)||(48375626-48375783)
chr3 (264-388)||(9563053-9563177)
chr3 (368-419)||(11095379-11095430)
chr3 (260-419)||(35093608-35093767)
chr3 (258-416)||(42823137-42823295)
chr3 (339-419)||(27714888-27714968)
chr3 (339-419)||(48587088-48587168)
chr3 (321-416)||(25395312-25395407)
chr3 (325-419)||(11907394-11907488)
chr3 (257-359)||(43746422-43746524)
chr3 (260-361)||(21746106-21746207)
chr3 (258-419)||(45058469-45058629)
chr3 (321-413)||(41080737-41080828)
chr3 (260-411)||(35965700-35965843)
chr3 (178-240)||(49106934-49106995)
chr3 (13-81)||(31067172-31067241)
chr3 (352-404)||(25413784-25413836)
chr3 (13-81)||(26796875-26796943)
chr3 (325-369)||(32605897-32605941)
chr3 (352-416)||(47190960-47191023)
chr3 (372-416)||(53581792-53581835)
[»] chr1 (43 HSPs)
chr1 (260-419)||(32813270-32813429)
chr1 (260-419)||(51898601-51898760)
chr1 (264-419)||(37649221-37649376)
chr1 (264-415)||(41758832-41758983)
chr1 (29-230)||(14344068-14344267)
chr1 (12-204)||(13061893-13062086)
chr1 (274-419)||(38632253-38632398)
chr1 (264-419)||(9474798-9474953)
chr1 (264-419)||(27564657-27564812)
chr1 (257-419)||(45044475-45044637)
chr1 (264-419)||(2581938-2582093)
chr1 (264-419)||(3000342-3000497)
chr1 (264-419)||(38595177-38595332)
chr1 (264-419)||(48716204-48716359)
chr1 (258-412)||(26440764-26440908)
chr1 (264-419)||(47452242-47452397)
chr1 (20-145)||(3374307-3374432)
chr1 (260-419)||(37926356-37926515)
chr1 (260-416)||(44454005-44454165)
chr1 (260-419)||(50590918-50591077)
chr1 (258-416)||(5958916-5959074)
chr1 (262-419)||(49811447-49811604)
chr1 (264-412)||(43162-43310)
chr1 (12-144)||(17114707-17114838)
chr1 (152-237)||(44163661-44163744)
chr1 (271-419)||(50630481-50630629)
chr1 (259-398)||(3302450-3302589)
chr1 (13-151)||(50903467-50903605)
chr1 (258-419)||(47748466-47748626)
chr1 (260-419)||(41608411-41608570)
chr1 (308-419)||(44548342-44548453)
chr1 (352-416)||(750239-750302)
chr1 (339-419)||(8346385-8346465)
chr1 (13-81)||(41035080-41035148)
chr1 (260-419)||(6260893-6261052)
chr1 (257-419)||(11152293-11152455)
chr1 (17-143)||(49491873-49491998)
chr1 (339-412)||(13414791-13414864)
chr1 (264-416)||(26274458-26274607)
chr1 (13-81)||(19394182-19394250)
chr1 (372-416)||(4401451-4401494)
chr1 (372-416)||(7447948-7447991)
chr1 (372-416)||(50448194-50448237)
[»] chr8 (39 HSPs)
chr8 (259-415)||(43414498-43414654)
chr8 (261-419)||(5957853-5958011)
chr8 (260-419)||(37038502-37038661)
chr8 (259-419)||(15048098-15048258)
chr8 (264-419)||(14547945-14548100)
chr8 (263-419)||(40423864-40424020)
chr8 (260-419)||(4854781-4854940)
chr8 (260-419)||(8841350-8841509)
chr8 (264-419)||(12831070-12831225)
chr8 (264-419)||(15197356-15197511)
chr8 (264-419)||(34012218-34012373)
chr8 (264-419)||(34307239-34307394)
chr8 (264-398)||(9122229-9122363)
chr8 (15-140)||(27786783-27786908)
chr8 (20-204)||(29369107-29369292)
chr8 (264-419)||(504043-504198)
chr8 (272-419)||(1179870-1180017)
chr8 (264-416)||(23122519-23122671)
chr8 (260-412)||(10284549-10284701)
chr8 (259-419)||(42221538-42221698)
chr8 (300-419)||(16383400-16383519)
chr8 (321-419)||(10621066-10621164)
chr8 (262-419)||(17443848-17444005)
chr8 (264-419)||(24307715-24307870)
chr8 (257-388)||(42354503-42354634)
chr8 (264-419)||(44507010-44507164)
chr8 (263-412)||(16056322-16056471)
chr8 (260-419)||(32032748-32032906)
chr8 (13-78)||(399778-399843)
chr8 (258-415)||(15258845-15259002)
chr8 (13-81)||(36206475-36206543)
chr8 (261-356)||(25838275-25838370)
chr8 (264-419)||(30479396-30479551)
chr8 (264-335)||(42710216-42710287)
chr8 (13-94)||(8831264-8831345)
chr8 (352-416)||(2547099-2547162)
chr8 (352-404)||(2165908-2165960)
chr8 (379-419)||(24307652-24307692)
chr8 (372-416)||(29705485-29705528)
[»] scaffold1268 (1 HSPs)
scaffold1268 (261-419)||(848-1006)
[»] scaffold1267 (1 HSPs)
scaffold1267 (261-419)||(848-1006)
[»] chr7 (45 HSPs)
chr7 (75-240)||(34547939-34548104)
chr7 (257-416)||(35522902-35523061)
chr7 (260-419)||(46033719-46033878)
chr7 (261-412)||(16374743-16374894)
chr7 (264-419)||(19329865-19330020)
chr7 (264-415)||(4999436-4999587)
chr7 (264-419)||(7389412-7389566)
chr7 (264-419)||(8080305-8080460)
chr7 (257-419)||(32564341-32564503)
chr7 (260-419)||(22343384-22343543)
chr7 (264-419)||(38837240-38837395)
chr7 (321-419)||(18207203-18207300)
chr7 (259-419)||(31735907-31736060)
chr7 (262-419)||(41915764-41915921)
chr7 (279-419)||(3784018-3784158)
chr7 (259-419)||(21234424-21234584)
chr7 (291-419)||(35137556-35137684)
chr7 (257-419)||(8238236-8238398)
chr7 (261-426)||(2318160-2318327)
chr7 (291-419)||(3694390-3694518)
chr7 (21-113)||(19407866-19407958)
chr7 (264-419)||(40957730-40957885)
chr7 (269-419)||(19436114-19436264)
chr7 (339-419)||(3434585-3434665)
chr7 (264-412)||(32951415-32951563)
chr7 (339-419)||(36361910-36361990)
chr7 (264-412)||(38267070-38267218)
chr7 (260-419)||(26296667-26296826)
chr7 (260-419)||(38044220-38044379)
chr7 (260-411)||(41423713-41423864)
chr7 (348-419)||(46374808-46374879)
chr7 (321-419)||(39255903-39256000)
chr7 (257-419)||(40846028-40846190)
chr7 (13-141)||(26449531-26449659)
chr7 (339-419)||(36362049-36362129)
chr7 (259-318)||(46374741-46374800)
chr7 (262-419)||(7727929-7728086)
chr7 (125-240)||(16099673-16099785)
chr7 (372-416)||(38160513-38160556)
chr7 (258-396)||(27744225-27744363)
chr7 (321-419)||(36208196-36208294)
chr7 (261-398)||(32045881-32046018)
chr7 (13-70)||(33191275-33191332)
chr7 (372-416)||(32029751-32029794)
chr7 (372-416)||(43317566-43317609)
[»] scaffold0018 (1 HSPs)
scaffold0018 (261-417)||(152523-152679)
[»] scaffold0237 (1 HSPs)
scaffold0237 (264-415)||(4056-4207)
[»] scaffold0110 (1 HSPs)
scaffold0110 (258-392)||(8779-8913)
[»] scaffold0531 (1 HSPs)
scaffold0531 (13-81)||(10256-10324)
[»] scaffold0321 (1 HSPs)
scaffold0321 (264-419)||(10031-10186)
[»] scaffold0316 (2 HSPs)
scaffold0316 (339-421)||(17075-17157)
scaffold0316 (257-335)||(17210-17288)
[»] scaffold0119 (1 HSPs)
scaffold0119 (372-416)||(808-851)


Alignment Details
Target: chr6 (Bit Score: 141; Significance: 1e-73; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 3949331 - 3949558
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||| | ||| ||| || ||||| |||||||||||    
T  3949331 cagagggaaagaagaagaaacaggtgaataaagtgaagctttttagttttaactgagccagaatgaggactcgtgttcagaagggtacctccaaagccgc 3949430  T
Q  113 cttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtctt 211  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||| |    
T  3949431 cttgacagatgcagaatagttgattcaattgcaacagaatatctgagaataccaatacttttgttcaaattttcttagagggagtagtc-tttcagtcgt 3949529  T
Q  212 tatttagccaagaatggtcatacttttga 240  Q
    ||||| |||||||||||||||||||||||    
T  3949530 tatttggccaagaatggtcatacttttga 3949558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 25167840 - 25168067
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |  ||| ||||| ||||| |||||||||||    
T  25167840 cagagagaaagaagaagaaacatgtgaacaaagtgaagccttctagttttaactcagccggaaagaggactcatgcccaaaagggtacctccaaagccgc 25167939  T
Q  113 cttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtctt 211  Q
    ||||| |||| |||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||| |||| ||||||||| |||||||| |    
T  25167940 cttgacagatacagaatagttggttcaattgcaacagaatatatgggaataccaatacttttgttcaaattttcatagaaagagtagtc-ttttagtcgt 25168038  T
Q  212 tatttagccaagaatggtcatacttttga 240  Q
    | ||| |||||| ||||||||||||||||    
T  25168039 tgtttggccaagtatggtcatacttttga 25168067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 31976430 - 31976271
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||||||  |||||| | |||||||| ||||||||||  |||||||||||||||   |||| |||||||| ||||| |    
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  31976330 gggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccaccta 31976271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 11427796 - 11427641
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||  |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| |||||    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || || ||||||||||||||    
T  11427696 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccaccta 11427641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 32869856 - 32869701
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||  | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  32869756 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 32869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 31952944 - 31953107
Alignment:
Q  256 taaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttg 355  Q
    ||||||||||||||||||||||| | |||||||  |||||  | | |||||| ||| || |||  ||||||||||| ||||| |||| ||||||||||||    
T  31952944 taaaggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttg 31953043  T
Q  356 tgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| | | ||  ||| ||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  31953044 tgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccaccta 31953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 30341277 - 30341437
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| | |||| |   |||||| | |||||||| |||| |||||  ||||||||||| ||| | |||| |||||||  |||||     
T  30341277 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 30341376  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  30341377 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 30341437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 15507938 - 15508101
Alignment:
Q  256 taaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttg 355  Q
    ||||||||||||||||||||||| | |||| |   |||||  | |||||||| |||| |||||  ||||||||||| ||| | |||| |||||||  |||    
T  15507938 taaaggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttg 15508037  T
Q  356 tgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || ||| | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  15508038 tgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 15508101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 15989960 - 15990119
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | |||||||| |||| |||||  ||||||||||| ||| | |||| |||||||  ||||| |    
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  15990060 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 15990119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 4231730 - 4231571
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||| |    
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  4231630 gggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccaccta 4231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 17598732 - 17598577
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||| | |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| ||  | ||||||||||||||    
T  17598632 ccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccaccta 17598577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 22880580 - 22880735
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||| ||| | |||||||| |||||| | |||||||| |||  |||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 22880679  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| |||||||||| |||||||||||||| || |||||||||||||||||    
T  22880680 ccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccaccta 22880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 415
Target Start/End: Complemental strand, 29858005 - 29857854
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||| |||||| | |||||||| ||| ||||||  ||||||||||| |||   |||| |||||||| || || |||||    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
     || || || ||||||||||||||||||||||||||||  ||||||||||||    
T  29857905 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgcca 29857854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 31110679 - 31110836
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    |||||||||||||||||||||||||||| | ||||||   |||||||| ||||||||||  ||||||||||| |||   |||| |||||||| |||||      
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||||||   ||||||||||||||  |||| |||| || |||||||||||||||||    
T  31110779 gggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgccaccta 31110836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 28536408 - 28536563
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    |||||||||||| |||||| ||||||   |||||| | |||||||| ||| || |||  |||| |||||| ||||  |||| |||||||| |||||||||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggg 28536507  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     | ||  |||||  ||||||||||||||||||||||| ||||| ||||||||||||||    
T  28536508 gtccacatgacc--gtgtcagatttttgtgtgggtgtcaagggttgtattgccaccta 28536563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 282 - 411
Target Start/End: Original strand, 23128067 - 23128196
Alignment:
Q  282 tttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtca 381  Q
    |||||| | |||||| | |||||| | ||| ||||||  ||||| |||||||||   |||| |||||||| ||||||||||| || ||||| ||||||||    
T  23128067 tttatttccatacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtca 23128166  T
Q  382 gatttttgtgtgggtgttaaggggtgtatt 411  Q
    ||||||||||||||||| || || ||||||    
T  23128167 gatttttgtgtgggtgtcaaaggatgtatt 23128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 398
Target Start/End: Complemental strand, 15832755 - 15832621
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||| |||||| |||||||||| |||||| | |||||||| ||| ||||||  ||| |||||||||||   |||| ||| ||| ||||||  ||||    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggat 15832656  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
     || ||||| |||||||| ||||||||||||||||    
T  15832655 ccacgtgactacgtgtcaaatttttgtgtgggtgt 15832621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 4263481 - 4263360
Alignment:
Q  24 aagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatg 123  Q
    |||||||| || || |||||| |||||| | |||||||||||||||||||||||||||   |||||||||| ||| | ||||||   | ||||  ||||     
T  4263481 aagaagaagcatgtaaacaaaatgaagcctgctagttttaactcagccggaatgaggacccgtgctcaaaagggttcctccaaaattgtcttggcagata 4263382  T
Q  124 cagaatagttggttcaattgca 145  Q
    | ||||||||||||||||||||    
T  4263381 cggaatagttggttcaattgca 4263360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 10990025 - 10990153
Alignment:
Q  17 gagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttg 116  Q
    ||||||||||||| | || | |||||||||||| | |||||| ||||||| ||||| |||||||| | |||| ||||| ||| | |||||||| ||| |     
T  10990025 gagaaagaagaagcagcaagagaacaaagtgaatccttctagctttaacttagccgaaatgaggactcgtgcacaaaagggttcctccaaagctgcccta 10990124  T
Q  117 atagatgcagaatagttggttcaattgca 145  Q
    | |||| || ||||||||||||| |||||    
T  10990125 acagatacaaaatagttggttcatttgca 10990153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 398
Target Start/End: Complemental strand, 12732665 - 12732526
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||||| |||||| | |||||    ||| ||||| ||  | |||  ||||||||||||||||| |||| ||| |||| || ||    
T  12732665 aaggaaaatgttacatagacatc-tttatttccatacatttttgtgcaccttatgtactagaaagagagaagaggagatgaaagagaaaatgtgcttatg 12732567  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
    |||||| ||  |  |||||||||||||||||||||||||||    
T  12732566 tgggatccacatagccacgtgtcagatttttgtgtgggtgt 12732526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 412
Target Start/End: Original strand, 9379670 - 9379782
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    |||| |||| || ||||||  ||||| ||||| ||||| |||| ||| |||||||||||| ||| ||  || |||||||||| |||||||| |||||||     
T  9379670 tgtataccttatgcattaggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtc 9379769  T
Q  400 aaggggtgtattg 412  Q
    ||||| |||||||    
T  9379770 aagggatgtattg 9379782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 31109426 - 31109477
Alignment:
Q  368 gtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||| ||||||||||||||||||||| ||| || |||||||||||||||||    
T  31109426 gtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 31109477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 411
Target Start/End: Complemental strand, 946518 - 946407
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    |||||| ||||| ||||||  |||||||||||||||   |||| |||||||| | | | |||||| | ||||| | |||||||||||||| || |||||     
T  946518 tgtacatctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtc 946419  T
Q  400 aaggggtgtatt 411  Q
    || |||||||||    
T  946418 aaagggtgtatt 946407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 419
Target Start/End: Original strand, 6209423 - 6209542
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    |||||| | ||| ||||||  |||||||||||||||   |||| |||||||| | ||| ||| | || ||||| ||||| |||||||||||||| ||||     
T  6209423 tgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtc 6209522  T
Q  400 aaggggtgtattgccaccta 419  Q
    ||   |||||||||||||||    
T  6209523 aaatagtgtattgccaccta 6209542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 30870135 - 30870057
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    ||||||||||||||| | |||| ||| |||| ||||| ||| | ||||||||||| ||| |||||||| | ||||||||    
T  30870135 agagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgtt 30870057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 7367672 - 7367715
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  7367672 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 7367715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 26669986 - 26669943
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  26669986 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 26669943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 4e-67; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 37049997 - 37050225
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagc-tttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccg 111  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||| ||||| ||||||||||    
T  37049997 cagagaaaaagaagaagaaacatgtgaacaaagtgaagcctttctagttttaactcagccggaatgaggactcgtgcccaaaagggtacctccaaagccg 37050096  T
Q  112 ccttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtct 210  Q
    | |||| |||| || ||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||| |||||||||||||| ||||||||     
T  37050097 ctttgagagatacaaaatagttggttcaattgcaacagaatatatgggaataccaatacttttgttcaaattttcatagagagagtagtc-ttttagtcg 37050195  T
Q  211 ttatttagccaagaatggtcatacttttga 240  Q
    || ||| |||||| ||||||||||||||||    
T  37050196 ttgtttggccaagtatggtcatacttttga 37050225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 262 - 421
Target Start/End: Complemental strand, 29978065 - 29977906
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| |||| |||||||| |||||||||    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggg 29977966  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatg 421  Q
     | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29977965 gtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatg 29977906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 264 - 412
Target Start/End: Complemental strand, 23608413 - 23608265
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||||||||||||| |||||  |||||||||||||| ||||||  ||||||||||||||||  |||| |||||||| ||||||||  |    
T  23608413 aatgatacatagacatcctttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagt 23608314  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    ||| ||||| ||||||||||||||||||||||||| ||  |||||||||    
T  23608313 tcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattg 23608265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 50052345 - 50052505
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| |||||||||| ||||||   ||||||||| || || |||  ||||||||||||||| | |||| |||||||| |||||     
T  50052345 aggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 50052444  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  50052445 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 50052505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 256 - 419
Target Start/End: Complemental strand, 29240072 - 29239909
Alignment:
Q  256 taaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttg 355  Q
    ||||||||||||||||||||||| |||||||||| |||||| | |||||||| ||| || |||  ||||||||||||||| | |||| |||||||| |||    
T  29240072 taaaggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttg 29239973  T
Q  356 tgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||| | || ||||| |||||| |||||||||||||| ||| ||  ||||||||||||||||    
T  29239972 tgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccaccta 29239909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 50526088 - 50526248
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||| ||| |||||||| |||||||| | |||||||| ||| || |||  ||||||||||||||| | || | |||| ||| |||||     
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgc 50526187  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || || || ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  50526188 ggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 50526248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 6034222 - 6034067
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||  |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| |||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 6034123  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| || |||||||||||||||||||||| || |||||||||||||||||    
T  6034122 ccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 6034067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 41236525 - 41236370
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||| ||| ||  ||||||||||||||||    
T  41236425 ccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccaccta 41236370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 394
Target Start/End: Original strand, 56300086 - 56300217
Alignment:
Q  263 aaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggga 362  Q
    ||||||||| ||||||| ||||||||  |||||  | |||||| ||||||||||||  ||||||||||||||| | |||| ||||||||||||||  |||    
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaagtgtgtttgtgcagga 56300185  T
Q  363 ttcatgtgaccacgtgtcagatttttgtgtgg 394  Q
    ||||| ||||||| ||||||||||||||||||    
T  56300186 ttcatatgaccacatgtcagatttttgtgtgg 56300217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 258 - 419
Target Start/End: Complemental strand, 31910376 - 31910215
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| | |||||||| |||||| | |||||| | ||||||||||  |||||||||| ||||   |||| |||||||| |||||    
T  31910376 aaggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtg 31910277  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||| | |||||| | | ||||||||||||||||||||||| || | |||||||| ||||||    
T  31910276 cggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcaccta 31910215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 260 - 401
Target Start/End: Complemental strand, 41824064 - 41823923
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||||||  ||||||   |||||||||||| ||||||  |||||||||| ||||   |||| |||||||| ||||| |    
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaa 401  Q
    || | |||||||| ||||||||||||||||||||||||||||    
T  41823964 gggtccatgtgactacgtgtcagatttttgtgtgggtgttaa 41823923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 264 - 416
Target Start/End: Original strand, 48182971 - 48183123
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||  |||||| | |||||||| ||| |||||   |||||||||||||||   |||| |||||||| ||||| ||| |    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
     || ||||| ||||||||||||||||||||||||| || ||||||||||||||    
T  48183071 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 48183123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 50813810 - 50813969
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | |||||| |||||  |||||  ||||||||||| ||| | |||| |||||||  ||||| |    
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || ||||| ||||||| |||||||||||||||||||||| |||||||||||| |||||||    
T  50813910 gggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccaccta 50813969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 28480184 - 28480345
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| |||||||    |||||  | |||||| ||||| || |||  ||||||||||||||||| | || ||||||||||||||    
T  28480184 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28480283  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| | ||  |||| || ||||||||||||||||| ||||||||  |||||||| ||||||    
T  28480284 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcaccta 28480345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 28481059 - 28481220
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| |||||||    |||||  | |||||| ||||| || |||  ||||||||||||||||| | || ||||||||||||||    
T  28481059 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28481158  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| | ||  |||| || ||||||||||||||||| ||||||||  |||||||| ||||||    
T  28481159 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcaccta 28481220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 28481934 - 28482095
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| |||||||    |||||  | |||||| ||||| || |||  ||||||||||||||||| | || ||||||||||||||    
T  28481934 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28482033  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| | ||  |||| || ||||||||||||||||| ||||||||  |||||||| ||||||    
T  28482034 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcaccta 28482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 29547876 - 29548036
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | ||||||||||||  || ||     
T  29547876 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgc 29547975  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||| ||| || |||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  29547976 gggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccaccta 29548036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 42044289 - 42044444
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||| | |||||| | |||||| | ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 42044388  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| |||||||||||||||||||||||||  | || ||||||||||||||    
T  42044389 ccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccaccta 42044444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 17983658 - 17983820
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    ||||| ||||||||||||||||   |||| |   |||||| | ||||||||||||  |||||  ||||||||||| ||| | |||| |||||||  ||||    
T  17983658 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 17983757  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  17983758 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 17983820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 19670631 - 19670793
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||    
T  19670631 aaaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 19670730  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | ||| || |||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  19670731 gcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccaccta 19670793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 40574959 - 40574802
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    ||||||||| ||||||| | |||||||  |||||| | |||||||| |||| |||||  |||||||||||||||   |||| |||||||| ||||  |||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || |||||  |  |||||||||||||||||||||||| || ||||||||| |||||||    
T  40574859 atccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 40574802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 413
Target Start/End: Original strand, 29589655 - 29589811
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||| ||||||||||| | |||| |   |||||| | ||||||||||||  |||||  ||||||||||| ||| | |||| |||||||  ||||    
T  29589655 aaaggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 29589754  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgc 413  Q
    ||||| | ||| || |||| | |||||||||||||||||||| ||||||||||||||    
T  29589755 gtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattgc 29589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 11511385 - 11511539
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||| | |||||| | |||||||||||| |||||   ||||||||||| |||   |||| |||||||| ||||| ||| |    
T  11511385 aatgatacatagaca-catttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggt 11511483  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||| ||||||||| || |||||||||||||||||    
T  11511484 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta 11511539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 300 - 419
Target Start/End: Original strand, 480405 - 480524
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||  ||| | || ||||| |||||||||||||||||||||||||     
T  480405 tgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtc 480504  T
Q  400 aaggggtgtattgccaccta 419  Q
    || |||||||||| ||||||    
T  480505 aaagggtgtattgtcaccta 480524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 18924405 - 18924572
Alignment:
Q  252 taattaaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtg 351  Q
    |||| |||||||||||||||||||||| | |||| |   |||||| | | ||||||||||  |||||  ||||||||||| ||| | |||| |||||||     
T  18924405 taatcaaaggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgta 18924504  T
Q  352 tttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||||| ||  ||||| |  |||| |||||||||||||||||| | | ||||||||||||||||||||    
T  18924505 cttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccaccta 18924572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 415
Target Start/End: Original strand, 24995029 - 24995180
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| ||||||   |||||||| ||| |||||   |||||||||||||||   |||| ||| |||| ||||| ||| |    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
     || ||||| |||||||| |||||| ||||||||| || |||||||||||||    
T  24995129 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgcca 24995180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 410
Target Start/End: Original strand, 18769037 - 18769115
Alignment:
Q  332 gagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtat 410  Q
    |||||| |||| ||| ||||||||||||||||| |  ||||||| |||||||||||||||||||||||| |||||||||    
T  18769037 gagatgaaagagaaaatgtgtttgtgtgggatttacatgaccacatgtcagatttttgtgtgggtgttagggggtgtat 18769115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 47104685 - 47104588
Alignment:
Q  301 gtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
    ||||||||||| |||||   ||||||||||||||||| |||| |||||||||||||||||| |  ||   ||||||||||| ||||||||||||||||    
T  47104685 gtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgt 47104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 47986394 - 47986231
Alignment:
Q  255 ttaaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgttt 354  Q
    |||||||||||||||||||||||| | || ||| | |||||| | |||||| | |||  |||||  ||||||||||| | | | |||| |||||||  ||    
T  47986394 ttaaaggaaaatgttacatagacacctttaattgc-atacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtactt 47986296  T
Q  355 gtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| ||| | ||| || |||| |||||||||||||||||| ||| ||||| ||||||||||||||    
T  47986295 gtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccaccta 47986231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 24239955 - 24239788
Alignment:
Q  24 aagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatg 123  Q
    ||||||||  ||||||| |||||||||| | |||| ||||||||||||||||||||||   |||| ||||| ||||| || |||||   ||||  ||||     
T  24239955 aagaagaagtaggtgaataaagtgaagcctactagctttaactcagccggaatgaggacccgtgcccaaaagggtacctcaaaagctatcttggcagata 24239856  T
Q  124 cagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttaga 190  Q
    || ||||||||| |||||| ||| |||| | | | ||||| ||||||||||||| |||||||| ||||    
T  24239855 cataatagttggctcaattacaaaagaataacagggaatatcaatacttttgttcaaattttcataga 24239788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 280 - 419
Target Start/End: Original strand, 54473471 - 54473610
Alignment:
Q  280 cctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgt 379  Q
    |||||||||| |||||| | |||||||  |||  |||||  |||||||||||||||   |||| |||||||| ||||| ||| | || ||||| ||||||    
T  54473471 cctttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgt 54473570  T
Q  380 cagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     |||||||||||||||||| ||  ||||||||| ||||||    
T  54473571 tagatttttgtgtgggtgtcaaatggtgtattgtcaccta 54473610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 55475373 - 55475214
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  || ||      
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || |||| |||||||||||||||||||||| || |||||||||||||||||    
T  55475273 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 55475214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 3481775 - 3481677
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||||| | || | |||| |||||||| ||||||||| | || ||||| | ||||||||||||||||||||||| || | |||||||||||||||    
T  3481775 agagagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccaccta 3481677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 18769230 - 18769141
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtat 410  Q
    ||||| || |||||||| |||| ||| ||| |||||||||| || |  ||||||||||||||||||||||||||||||||  ||||||||    
T  18769230 agagaaaaaaggagatgaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgttagagggtgtat 18769141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 18522369 - 18522202
Alignment:
Q  66 tcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaatacc 164  Q
    |||||||||||||||||  |||||||||| | | | ||||||| || ||||  ||||  ||||||||||||||| ||||| ||||| ||  | |||||      
T  18522369 tcagccggaatgaggatccgtgctcaaaaggatgcctccaaagtcgacttggcagatatagaatagttggttcagttgcagcagaatattcgggaatatg 18522270  T
Q  165 aatacttttgttgaaattttcttagagagagtagtctttttagtctttatttagccaagaatggtcata 233  Q
    |||||||||||| |||||||| |||||||  ||||| | ||||  ||| ||| ||||||||||||||||    
T  18522269 aatacttttgttcaaattttcatagagagtatagtc-tattagcttttgtttggccaagaatggtcata 18522202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 412
Target Start/End: Original strand, 48647705 - 48647796
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    ||||||||||||||| | |||| ||| |||| ||||| ||  | || |||||||||||| |||||||| ||||||||||||| |||||||||    
T  48647705 agagagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattg 48647796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 16832263 - 16832082
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    ||||||||| ||| ||||| || |||||||||||||||| | |||  ||||||||||  ||||||||||   ||| |||||| ||| | |||||||| |     
T  16832263 cagagagaaggaataagaagcatgtgaacaaagtgaagcctactaactttaactcagttggaatgaggacacgtgttcaaaagggtgcctccaaagctgt 16832164  T
Q  113 cttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagag 193  Q
    ||||  |||| || |||||| |||||| ||||| ||||| | ||  ||||| ||||||||||  | |||||||| |||||||    
T  16832163 cttggcagatacataatagtcggttcatttgcatcagaatagctaggaatatcaatacttttactcaaattttcatagagag 16832082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 415
Target Start/End: Original strand, 29234205 - 29234318
Alignment:
Q  302 tacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaa 401  Q
    |||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| | || ||||| ||||||||||||||||||  ||| | ||    
T  29234205 tacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaa 29234304  T
Q  402 ggggtgtattgcca 415  Q
     |||||||||||||    
T  29234305 agggtgtattgcca 29234318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 32767028 - 32766981
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  32767028 ccacatgtcagatttttgtatgggtgtcaaggggtgtattgccaccta 32766981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 55079692 - 55079791
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattc-atgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||| ||| | |||| |||||||  |||||||||  || || || |||| |||||||||||||| ||||||| ||| ||||||||||||||||    
T  55079692 agagagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgccaccta 55079791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 19852481 - 19852547
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgag 79  Q
    |||||| |||||||||||| || ||| ||||||||| || | |||||||||||||| ||||||||||    
T  19852481 cagagaaaaagaagaagaagcacgtgcacaaagtgaggcctgctagttttaactcacccggaatgag 19852547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 44536725 - 44536822
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||| ||| | |||| |||||||  || |||||| |  || ||||||| |||||||||||||||||| ||| || |||||||||||||||||    
T  44536725 agagagaagagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccaccta 44536822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 16593892 - 16593826
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgag 79  Q
    |||||| ||||||| |||| || ||| ||||||||| || | |||||||||||| ||||||||||||    
T  16593892 cagagaaaaagaagtagaagcacgtgcacaaagtgaggcctgctagttttaacttagccggaatgag 16593826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 29535497 - 29535425
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgg 394  Q
    |||||||| | |||||| |||| |||||||||||||||||||| || ||| ||| ||| || ||||||||||||    
T  29535497 agagagaataagagatgaaagagaaagtgtgtttgtgtgggatccacgtggccatgtg-catatttttgtgtgg 29535425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 37344616 - 37344843
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||| ||||  |||||||||||    
T  37344616 cagagagaaagaagaagaaacaggtgaacaaagtgaatcattctagttttaactcagccggaatgaggattcgtgcccaaaagggtatctccaaagccgc 37344715  T
Q  113 cttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtctt 211  Q
    ||||| | || || |||||||| |||| ||||| || || ||||| ||||||||||| ||||||| ||||||||||| ||||||||||| || ||||| |    
T  37344716 cttgacatatacataatagttgattcatttgcagcataatatctgggaataccaatatttttgttcaaattttcttatagagagtagtc-ttctagtcgt 37344814  T
Q  212 tatttagccaagaatggtcatacttttga 240  Q
    | ||| |||||||||||||||||| ||||    
T  37344815 tgtttggccaagaatggtcatactcttga 37344843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 28863633 - 28863478
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||||||| ||||||  ||||||||||||||||  |||| |||||||| ||||| ||| |    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  28863533 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 28863478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 40613819 - 40613979
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| |||||||||| |||||| | |||||||| |||||||||   ||| |||| ||||||   |||| |||||||| |||||     
T  40613819 aggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgc 40613918  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | |||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  40613919 ggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 40613979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 264 - 415
Target Start/End: Original strand, 7465657 - 7465808
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||||||| ||||||  |||||||||| |||||  |||| |||||||| ||||||||| |    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||    
T  7465757 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 7465808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 264 - 415
Target Start/End: Complemental strand, 17473198 - 17473047
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||||||| ||||||  |||||||||||||||   |||| |||||||| ||||| |||||    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||    
T  17473098 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 17473047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 420
Target Start/End: Original strand, 17819962 - 17820082
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    |||||||||||| ||||||  ||||||||||||||||| |||| ||| |||||||||||||| | || || ||||| ||||||||||||||||||||||     
T  17819962 tgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtc 17820061  T
Q  400 aaggggtgtattgccacctat 420  Q
    |||||||||||||||||||||    
T  17820062 aaggggtgtattgccacctat 17820082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 31092312 - 31092505
Alignment:
Q  12 acagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccg 111  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||| |||||||||||||||||||||| | |||| ||||| ||||| ||||||| ||    
T  31092312 acagagagaaagaagaagaatcacgtgaataaagtgatgccttctagatttaactcagccggaatgaggactcgtgcccaaaagggtacctccaaagtcg 31092411  T
Q  112 ccttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttt 204  Q
     ||||  |||| ||||||||||||| || |||||  |||| ||| | |||   |||| |||||||| |||||||| ||||||| ||||||||||    
T  31092412 tcttgccagatacagaatagttggtccatttgcattagaatatccgggaacgtcaatgcttttgttcaaattttcatagagagggtagtctttt 31092505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 42257376 - 42257216
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||| ||||||||||| |||||||| |||||||| | |||||||| ||||||||||  ||| |||||||||||   |||| |||||||| |||||     
T  42257376 aggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgc 42257277  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | |||||| ||||||||||||||||| ||||||||| ||  | ||||||||||||||    
T  42257276 ggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccaccta 42257216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 19930742 - 19930897
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||| |||||| | |||||||||||| ||||||  |||||||||||||||   |||| |||||||||||||| ||| |    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||  |||| ||||||||||||||||||||| ||| || |||||||||||||||||    
T  19930842 ccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 19930897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 260 - 416
Target Start/End: Complemental strand, 20700997 - 20700841
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| |||||||||| |||||| | |||||||| ||| || |||  ||||||||||||||| | |||| |||||||| || || |    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    || | || ||||| ||||||||||||||||||| || || || ||||||||||||||    
T  20700897 gggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccac 20700841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 14296380 - 14296202
Alignment:
Q  14 agagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgcc 113  Q
    |||||||||||||||||| ||| |||||||| |||||| | |||| |||||||||||||||||||| | | |||  ||||| ||||| |||||||  |||    
T  14296380 agagagaaagaagaagaagcagatgaacaaaatgaagcctactagctttaactcagccggaatgagcactcgtgtccaaaagggtacctccaaagatgcc 14296281  T
Q  114 ttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagag 191  Q
    |||  |||| || |||||||||||||||||||| |||| |  || |||||  |||||||||||| |||||||| |||||    
T  14296280 ttggcagatacataatagttggttcaattgcaatagaataagtgggaatataaatacttttgttcaaattttcgtagag 14296202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 259 - 416
Target Start/End: Complemental strand, 2533306 - 2533150
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||| ||| ||| |||||||||| |||||| | |||||||| |||||||| |  ||||||||||||||||  ||||||||||||| |||||     
T  2533306 aggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgc 2533207  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    ||| |  ||||| | ||||||||||||||||||| ||||| || || |||||||||||    
T  2533206 ggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccac 2533150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 271 - 419
Target Start/End: Original strand, 33436029 - 33436177
Alignment:
Q  271 catagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtg 370  Q
    |||||||| | |||||||  |||||| | |||||||||||| ||||||  |||||||||| |||| | |||| |||||||| ||||| ||| | || |||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtg 33436128  T
Q  371 accacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || |||||| |||||||||||||||||| || |||||||||||||||||    
T  33436129 actacgtgttagatttttgtgtgggtgtcaaagggtgtattgccaccta 33436177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 419
Target Start/End: Complemental strand, 9058642 - 9058503
Alignment:
Q  280 cctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgt 379  Q
    |||||||||| |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| | ||  |||| ||||||    
T  9058642 cctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgt 9058543  T
Q  380 cagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  9058542 cagatttttgtgtgggtgtcaaagggtgtattgccaccta 9058503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 13438521 - 13438366
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||  | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || || ||||||| ||||||    
T  13438421 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcaccta 13438366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 392
Target Start/End: Complemental strand, 3154303 - 3154193
Alignment:
Q  282 tttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtca 381  Q
    |||||||||||| |||| |||| ||| | | ||||||||||||| ||||||||||| |||| ||| |||||||| | ||||| |||||||||||||||||    
T  3154303 tttattcctatagacacttgtataccccgtgcattagtgagagaaaagaggagatgaaagagaaactgtgtttgggcgggatccatgtgaccacgtgtca 3154204  T
Q  382 gatttttgtgt 392  Q
    |||||||||||    
T  3154203 gatttttgtgt 3154193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 18811828 - 18811704
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    ||||||||||||||||||| |||||| | ||||||||||||| ||| ||||||||||||||||||||||   |||| ||||| ||  | ||||||||  |    
T  18811828 cagagagaaagaagaagaagcaggtgcataaagtgaagctttatagctttaactcagccggaatgaggacccgtgcccaaaagggctcctccaaagctac 18811729  T
Q  113 cttgatagatgcagaatagttggtt 137  Q
    ||||| |||| ||||||||||||||    
T  18811728 cttgacagatacagaatagttggtt 18811704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 412
Target Start/End: Complemental strand, 36169018 - 36168866
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| |||||||||  |||||| | |||||||| ||||||||||  |||||||| ||||||   |||| ||||| || ||||| |    
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    || | |||||| |||||||||| ||||||||||||| ||||| || |||||||    
T  36168918 gggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattg 36168866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 10249304 - 10249459
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||  |||||| | |||||||| ||| ||||||  ||||| |||||||||   |||| |||||||| ||||| ||| |    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  10249404 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcaccta 10249459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 28381577 - 28381732
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||  | |||||||| |||| |||||  |||||||||| ||||   |||| |||||||| ||||| ||  |    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     |||||||| |||||||||||||||||||||||||  |  ||||||||||||||||    
T  28381677 ccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccaccta 28381732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 2997402 - 2997564
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    ||||| ||||||||||||||||   |||| |   |||||| | ||||||||||||  |||||  ||||||||||| ||| | |||| |||||||  ||||    
T  2997402 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 2997501  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  2997502 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 2997564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 38273100 - 38273215
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    |||||||| ||||||||||  |||||||| ||||||   |||| |||||||| | ||| ||| | |||||| | ||||||||||||||||||||||||||    
T  38273100 tgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtt 38273199  T
Q  400 aaggggtgtattgcca 415  Q
    || |||||||||||||    
T  38273200 aaagggtgtattgcca 38273215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 420
Target Start/End: Complemental strand, 44152108 - 44151945
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    |||||||||||||| ||| | |||||||  |||||| | |||| | ||||| ||||||  ||||||||||||||||| |||| |||||||| ||||||||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtgg 44152009  T
Q  361 gattc---atgtgaccacgtgtcaga-tttttgtgtgggtgttaaggggtgtattgccacctat 420  Q
    |||||   |  | ||||||||||||| ||||| ||| |||||||| | |||||||| |||||||    
T  44152008 gattcactacataaccacgtgtcagattttttttgtaggtgttaaagagtgtattgtcacctat 44151945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 17823971 - 17823807
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||||||||||||   |||||| | |||||||| |||| ||| |  |||||||||| |||||| |||| |||||||| |||| |    
T  17823971 aggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtat 17823872  T
Q  359 ggg----attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||    ||  || |    |||||||||||||||||||||||||| |||  ||||||||||||||    
T  17823871 ggggtccatatatatagttacgtgtcagatttttgtgtgggtgttcaggaatgtattgccaccta 17823807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 30915641 - 30915486
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||||| ||||| | |||||| | |||||||| |||  |||||  |||||||||| ||||   |||| |||||||| ||||  ||| |    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 30915542  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||| |||||| || || |||||||||||||||||    
T  30915541 ccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccaccta 30915486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 32505570 - 32505725
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||  ||||||||  |||||| | |||||||| ||| |||||   |||||||||||||||   || | |||||||| ||||| ||| |    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  32505670 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcaccta 32505725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 257 - 412
Target Start/End: Complemental strand, 38732539 - 38732384
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||| | |||| |   |||||  | |||||| |||||  |||||  ||||||||||| ||| | |||| |||||||  ||||    
T  38732539 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 38732440  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    | ||| | ||| ||||||| |||||||||||||||||||||| ||||| |||||||    
T  38732439 gcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattg 38732384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 40701656 - 40701501
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||| | |||||| | ||||||||  || ||||||  |||||||||| ||||   |||| |||||||| ||||| ||| |    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || || || ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  40701556 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 40701501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 43490303 - 43490144
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | ||||||||  ||  |||||  ||||||||||| ||| | |||| |||||||  ||||| |    
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || |||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  43490203 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcaccta 43490144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 419
Target Start/End: Complemental strand, 3440163 - 3440002
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| |||||||| | ||||||   ||||||||  |||   |||  ||||||||||||||| | |||| ||| |||| |||||    
T  3440163 aaggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtg 3440064  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||| | || || | ||| ||| ||||||||||||||||||  ||| |||||||||||||||    
T  3440063 cggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccaccta 3440002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 5574485 - 5574565
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||| ||||| ||||| || ||||| ||||||||||||||| ||||||||| || |||||||||||||||||    
T  5574485 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta 5574565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 416
Target Start/End: Original strand, 15428663 - 15428814
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    ||||||||||||||||| ||||  |  |||||| | |||||||| |||  | |||  ||||| ||||||||||| |||| ||| |||||||| ||||| |    
T  15428663 aatgttacatagacatcatttaccctcatacacccttgtacacc-catgtactagaaagagaaaagaggagatgaaagagaaaatgtgtttgcgtggggt 15428761  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    | |  || |||| ||||||||||||||||| |||||||||||||||| |||||    
T  15428762 ttacatggccacatgtcagatttttgtgtgagtgttaaggggtgtatggccac 15428814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 415
Target Start/End: Complemental strand, 13365536 - 13365380
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| | |||| |   || ||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  |||||     
T  13365536 aggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 13365437  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
    ||| | ||| ||  ||| |||||||||||||||||||||| ||||||| ||||||||    
T  13365436 ggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgcca 13365380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 45097652 - 45097812
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||| ||||| |||| |   |||||| | |||||| |  ||  |||||  ||||||||||| ||| | |||| |||||||  |||||     
T  45097652 aggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 45097751  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | ||| || |||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  45097752 ggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccaccta 45097812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 4060863 - 4060708
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||| ||||| |||||| | |||||| | |||||||| ||| ||||||  |||||||||| ||||   || | |||||||| || || |||||    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggat 4060764  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || || || ||||||||||||||||||||| ||| ||  ||||||||| ||||||    
T  4060763 ccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcaccta 4060708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 26891530 - 26891581
Alignment:
Q  368 gtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  26891530 gtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccaccta 26891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 8413933 - 8413844
Alignment:
Q  20 aaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagc 109  Q
    |||| ||||||| |||| |||||||||||||| | |||| || |||||| ||||||||||||   |||||||||| ||||| ||||||||    
T  8413933 aaagcagaagaagcaggcgaacaaagtgaagcctactagcttcaactcaaccggaatgaggacccgtgctcaaaagggtacctccaaagc 8413844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 18693124 - 18693230
Alignment:
Q  39 aacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatgcagaatagttggttc 138  Q
    ||||||||||||  | |||| ||||||| ||||||||||||||  |||||  |||| ||| | |||||||  | ||||| |||| || ||||||||||||    
T  18693124 aacaaagtgaagtctgctagctttaactaagccggaatgaggacctgtgcctaaaagggttcctccaaagttgtcttgacagatacaaaatagttggttc 18693223  T
Q  139 aattgca 145  Q
    |||||||    
T  18693224 aattgca 18693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 21301415 - 21301516
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||| ||||||||| ||| ||| |||||||| | |||||| | |||||||||||| || |||  ||| ||||||| ||||  |||| |||||||||||||    
T  21301415 aaagaaaaatgttagatacacaccctttatttccatacactcatgtacacctcatgcactaggaagaaagaagagaagataaaagagaaagtgtgtttgt 21301514  T
Q  357 gt 358  Q
    ||    
T  21301515 gt 21301516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 27864772 - 27864730
Alignment:
Q  374 acgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    ||||||||||||||||||||| ||| || ||||||||||||||    
T  27864772 acgtgtcagatttttgtgtggatgtcaaagggtgtattgccac 27864730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 41575258 - 41575168
Alignment:
Q  322 gagagaagaggagatgcaagaaaaagtgtgtttgtgt-gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtatt 411  Q
    |||||||||||||||| |||| |||||||| |||||| ||| | ||  ||||||| ||||| |||||||||||  ||| || |||||||||    
T  41575258 gagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtatt 41575168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 388
Target Start/End: Complemental strand, 41758772 - 41758639
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgca--agaaaaagtgtgttt 354  Q
    |||| |||||||||||||||||   |||||||  |||||  | |||||||| |||| |||||  ||||||||||||||||  |  |||||| ||| ||||    
T  41758772 aaagaaaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtgcgttt 41758673  T
Q  355 gtgtgggattcatgtgaccacgtgtcagattttt 388  Q
     || | |||| ||||| | |||||||||||||||    
T  41758672 atgcgagatttatgtggctacgtgtcagattttt 41758639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 16096871 - 16096914
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  16096871 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 16096914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 42849836 - 42849793
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  42849836 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 42849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 255 - 427
Target Start/End: Original strand, 6259914 - 6260086
Alignment:
Q  255 ttaaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgttt 354  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| |||| |||||||| ||    
T  6259914 ttaaaggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtgctt 6260013  T
Q  355 gtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatgattgtg 427  Q
     |||| | | |||||||||| |||| ||||||||| ||||||||||| |||||||||| |||||||| |||||    
T  6260014 ctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtg 6260086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 48 - 240
Target Start/End: Complemental strand, 32278794 - 32278607
Alignment:
Q  48 aagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatgcagaatagttggttcaattgcaac 147  Q
    |||| |||||||||||||||||||||||||| |||| || | ||||| ||||| |||||||||||||||| |||| ||||||||| ||||||||||||||    
T  32278794 aagccttctagttttaactcagccggaatgaagattcgttcccaaaagggtacctccaaagccgccttgacagatacagaatagtgggttcaattgcaac 32278695  T
Q  148 agaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtctttatttagccaagaatggtcatacttttga 240  Q
    | || || ||||||||||||     ||| |  |||||||||||||||||||||| |||||||| || ||| |||||||||||||||||||||||    
T  32278694 aaaatatatgagaataccaa-----ttgctctaattttcttagagagagtagtc-ttttagtcgttgtttggccaagaatggtcatacttttga 32278607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 6679879 - 6679721
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    |||||||||||||||||||| ||||||   |||||| | ||||||||  |||||||||  |||||||||||||||   |||| ||| |||||||||| ||    
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | | |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  6679779 ggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 6679721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 419
Target Start/End: Complemental strand, 26720700 - 26720539
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||| ||||||||| |||||||  |||||| |  ||||||| ||||||||||  ||||||||||| |||   |||| |||||||| |||||    
T  26720700 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26720601  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||||| |||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  26720600 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccaccta 26720539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 419
Target Start/End: Complemental strand, 26990449 - 26990288
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||| ||||||||| |||||||  |||||| |  ||||||| ||||||||||  ||||||||||| |||   |||| |||||||| |||||    
T  26990449 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26990350  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||||| |||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  26990349 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccaccta 26990288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 18520806 - 18520961
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| ||||||||   |||||| | |||||||||||| ||||||  ||||||||||||||||  |||| |||||||| ||||| ||| |    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  18520906 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 18520961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 788398 - 788228
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    ||||||||||||||||||| ||| |||||||| |||||| |||||  |||||||||| ||  ||||||| | |||| ||||| ||| | |||||||||||    
T  788398 cagagagaaagaagaagaagcagatgaacaaaatgaagccttctaactttaactcagacgctatgaggactcgtgcccaaaagggttcctccaaagccgc 788299  T
Q  113 cttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattt 183  Q
    ||||| | ||  |||||| |||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  788298 cttgacatatatagaataattggttcaattgcaacagaatatcggagaataccaa-acttttgttcaaattt 788228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 2740452 - 2740297
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||| | ||| ||||||  ||||||||| |||||   |||| |||||||| ||||| |||||    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  2740352 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 2740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 426
Target Start/End: Original strand, 39557475 - 39557601
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    ||||||||||||  |||||  ||||||||||||||||  |||| |||||||| |||| |||| | ||||||| |||||||||||||||||||||| ||||    
T  39557475 tgtacacctcatgtattaggaagagagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgtt 39557574  T
Q  400 aaggggtgtattgccacctatgattgt 426  Q
    ||| |||||||| ||||||||||||||    
T  39557575 aagaggtgtattaccacctatgattgt 39557601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 303 - 419
Target Start/End: Complemental strand, 28177914 - 28177798
Alignment:
Q  303 acacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaag 402  Q
    ||||| ||||||||||  |||| ||||||||||   |||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||||| ||     
T  28177914 acaccccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaa 28177815  T
Q  403 gggtgtattgccaccta 419  Q
    |||||||||||||||||    
T  28177814 gggtgtattgccaccta 28177798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 14831992 - 14831837
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||  | |||||||| ||| ||||||  |||||||||||||||   || | |||||||| ||||| |||||    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||| ||||||||| || |||||||||||||||||    
T  14831892 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta 14831837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 272 - 419
Target Start/End: Original strand, 36732872 - 36733019
Alignment:
Q  272 atagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtga 371  Q
    ||||||| |||||||||| |||||| | |||||||||||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| | || ||||    
T  36732872 atagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtga 36732971  T
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | | ||||||||||||||||||||||| || ||||||||||| |||||    
T  36732972 ctatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctaccta 36733019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 40145585 - 40145430
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||  ||| || | |||||||||| | ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  40145485 ccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccaccta 40145430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 3921181 - 3921342
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| | |||| |   |||||| | |||||||| |||| |||||  ||||||||||| ||| | |||| |||||||  |||||    
T  3921181 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 3921280  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||| | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  3921281 cggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 3921342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 2252085 - 2252245
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| | |||| |   |||||| | |||||||| |||| |||||  ||||||||||| ||| | |||| |||||||  |||||     
T  2252085 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 2252184  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  2252185 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 2252245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 15409528 - 15409687
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| |||||||||  |||||| | |||||||| ||||||||||  |||||||||||||||   |||| | |||||| ||||| |    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgcg 15409627  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | |||||| | ||||||||||||||||||||||||| || |  ||||||| ||||||    
T  15409628 gggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcaccta 15409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 33149560 - 33149715
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||   ||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| |||||    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 33149659  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| |||||||| |||||||||||||||| || ||||||||| |||||||    
T  33149660 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccaccta 33149715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 35943812 - 35943969
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    |||||||||||||||||   |||||| | |||||| | |||||||| ||| || |||  ||||| ||||||||| | |||| |||||||| |||||||||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || || || || ||||||||||||||||||||||||| ||  | ||||||||||||||    
T  35943912 atccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccaccta 35943969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 35811126 - 35811305
Alignment:
Q  12 acagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccg 111  Q
    ||||||||| |||||||||| |||||||| ||||| |||  |||||  ||||| ||||  |||||||||| | |||  |||||||||| | ||||||| |    
T  35811126 acagagagatagaagaagaagcaggtgaataaagtaaagtgttctaactttaattcagttggaatgaggactcgtgtccaaaatggtattaccaaagc-g 35811224  T
Q  112 ccttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagag 191  Q
    |||||| | ||  | |||||||||||||||||||||| || || || ||||||||||||||||||| |||||||| |||||    
T  35811225 ccttgacaaatataaaatagttggttcaattgcaacataatatttgggaataccaatacttttgttcaaattttcatagag 35811305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 259 - 398
Target Start/End: Complemental strand, 31009171 - 31009032
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| |||||||||  ||||||   |||||||| ||| || |||  ||||||||||| ||| | || | |||||||| |||||     
T  31009171 aggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgc 31009072  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
    ||||| || ||||| |||||||||||||||||||||||||    
T  31009071 gggatccacgtgactacgtgtcagatttttgtgtgggtgt 31009032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 35785377 - 35785222
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||| | |||||| | |||||||| ||| ||||||  |||||||||| ||||   |||| |||||||| ||||| |||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || || || ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  35785277 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 35785222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 269 - 419
Target Start/End: Complemental strand, 13811825 - 13811675
Alignment:
Q  269 tacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatg 368  Q
    |||||||||| | |||||||| |||||  | |||||| | ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| | || |    
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacg 13811726  T
Q  369 tgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| ||||||||||||||||||||||||| ||  | ||||||||||||||    
T  13811725 tgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccaccta 13811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 36868291 - 36868425
Alignment:
Q  15 gagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgcct 114  Q
    ||||||||||||||||| || ||||| |||||||||| |||||| |||||||||||||||||||||    |||  ||||| ||| | ||||||||  |||    
T  36868291 gagagaaagaagaagaagcaagtgaataaagtgaagccttctagctttaactcagccggaatgagggcccgtgtccaaaagggttcctccaaagctacct 36868390  T
Q  115 tgatagatgcagaatagttggttcaattgcaacag 149  Q
    ||| |||| || ||||||||||||||  |||||||    
T  36868391 tgacagatacataatagttggttcaaaggcaacag 36868425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 419
Target Start/End: Complemental strand, 16328041 - 16327924
Alignment:
Q  302 tacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaa 401  Q
    |||||| |||| ||||| |||||||||||| | ||| ||||||||||||| ||||||| | | ||  ||| |||||||||||||||| ||||||||| ||    
T  16328041 tacaccccatatattagggagagagaagagaaaatgaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaa 16327942  T
Q  402 ggggtgtattgccaccta 419  Q
     || ||||||||||||||    
T  16327941 tggatgtattgccaccta 16327924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 33825243 - 33825401
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    ||||||||||||| |||| | |||||||  |||||  | | |||||| ||| || |||  ||||||||||| ||||  |||| |||||||| ||||||      
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaa 33825342  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||||  ||| |||||||||||||||| ||||||||| |||| |||||||||||||||    
T  33825343 ggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccaccta 33825401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 19215378 - 19215511
Alignment:
Q  12 acagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccg 111  Q
    |||||||||| ||||||||| |||||||||||||||| ||  ||||| |||||||||||| |||||||||   | || ||||| ||||| | |||| | |    
T  19215378 acagagagaatgaagaagaagcaggtgaacaaagtgatgccgtctagctttaactcagcccgaatgaggacccgagcccaaaagggtaccttcaaaactg 19215477  T
Q  112 ccttgatagatgcagaatagttggttcaattgca 145  Q
    |||||  |||| |||||||||||||  |||||||    
T  19215478 ccttggcagatacagaatagttggtcgaattgca 19215511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 42414281 - 42414379
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||||| |   |||| |||||||| ||||| ||| | ||  |||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  42414281 agagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 42414379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 419
Target Start/End: Complemental strand, 38296320 - 38296226
Alignment:
Q  325 agaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||||| | || |||||||| |||||| |||| || ||  | ||||||| ||||||||||||||| ||||| ||||||||| ||||||    
T  38296320 agaagaggagatgaatgagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacaccta 38296226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 416
Target Start/End: Original strand, 39688814 - 39688971
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| | |||| |   ||||||   ||||||||  ||  |||||  ||||||||||  ||| | |||| |||||||  || ||     
T  39688814 aggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgc 39688913  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    ||| ||||| ||||||| | |||||||||||||||||||| ||||| |||||||||||    
T  39688914 ggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccac 39688971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 411
Target Start/End: Complemental strand, 9603934 - 9603844
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtatt 411  Q
    |||||||||| || ||| |||| |||||||| |||| |||| | ||| |||||| ||||||||||||||||| ||||| || | |||||||    
T  9603934 agagagaagacgaaatgaaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtatt 9603844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 398
Target Start/End: Complemental strand, 21370186 - 21370048
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| ||||||||   ||||||   |||||| || ||| | |||  ||| |||||| |||| | |||| ||| |||||||||| |    
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
    || | || |||||||| ||||||||||||| ||||||||    
T  21370086 gggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 37307251 - 37307134
Alignment:
Q  86 tgctcaaaatggtacttccaaagccgccttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaatttt 184  Q
    ||||||||| ||||| |  ||||| | ||||  |||| || |||||||||||||||| ||| |||| | |||  |||| ||||||||||||| |||||||    
T  37307251 tgctcaaaagggtacctttaaagctgtcttggcagatacataatagttggttcaattacaaaagaataactggaaatatcaatacttttgttcaaatttt 37307152  T
Q  185 cttagagagagtagtctt 202  Q
    |  |||||| ||||||||    
T  37307151 cacagagagtgtagtctt 37307134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 33801572 - 33801635
Alignment:
Q  352 tttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| || ||  |||||||||||| ||||||||||||| ||| | ||||||||||||    
T  33801572 tttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtg-taaagagtgtattgccac 33801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 36875644 - 36875680
Alignment:
Q  383 atttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||||||||||| || |||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccaccta 36875680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 26141443 - 26141609
Alignment:
Q  255 ttaaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagaga--gaagaggagatgcaagaaaaagtgtgt 352  Q
    |||||||||||||||||||||||| |||||||| | |||||| | |||||||| ||||||||||  |||||  ||||||||||   |||| ||||||||     
T  26141443 ttaaaggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgc 26141542  T
Q  353 ttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26141543 ttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccaccta 26141609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 260 - 427
Target Start/End: Original strand, 25407065 - 25407233
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||| |||| || ||||||||| |||| | |  | ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25407065 ggaaaatgttatatagtcaccctttattcttatatatatttatacaccttatacattagtgagagagaagaggagatgaaagagaaagtgtgtttgtgtg 25407164  T
Q  360 ggattcatgtgaccacgtgtcaga-tttttgtgtgggtgttaaggggtgtattgccacctatgattgtg 427  Q
    |||| ||| ||| ||||||||||| |||||||||| |||| ||||||| |||||||||||||| |||||    
T  25407165 ggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtg 25407233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 49607592 - 49607437
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | ||||||| |||| ||||||  ||||| |||||||||   |||| |||||||| |||||||||||    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  49607492 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 49607437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 20764829 - 20764992
Alignment:
Q  256 taaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttg 355  Q
    ||||||||||||||||||||||| | |||||||  |||||| | |||||||| ||||||||||  |||||||||| ||||   |||| |||||||| |||    
T  20764829 taaaggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttg 20764928  T
Q  356 tgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |  ||| | |||||| |||||||||||||||||||||||||||||| | ||||||| |||||||    
T  20764929 tacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccaccta 20764992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 251 - 419
Target Start/End: Original strand, 33118759 - 33118928
Alignment:
Q  251 ttaattaaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaag-aggagatgcaagaaaaagtg 349  Q
    ||||||| ||||||||||||| |||||| |||||||| | |||||| | |||||||| ||| || ||| |||||||||| |||||| | |||| ||||||    
T  33118759 ttaattataggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtg 33118858  T
Q  350 tgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||| || ||||| || ||||| |||||||| |||||||||||||||| || |||||||||| ||||||    
T  33118859 tgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcaccta 33118928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 53982189 - 53982034
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||  | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  53982089 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 53982034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 257 - 415
Target Start/End: Complemental strand, 47532050 - 47531892
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||| ||| |||||||||| |||||||| ||||||   ||||||||||  |||||||| ||||||   |||| |||||||| ||||    
T  47532050 aaaggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 47531951  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
    | ||| ||||| || |||||||||||||| |||||||| ||||||  ||||||||||||    
T  47531950 gcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgcca 47531892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 264 - 417
Target Start/End: Complemental strand, 33644378 - 33644225
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | | |||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacc 417  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  33644278 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacc 33644225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 29346803 - 29346987
Alignment:
Q  21 aagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatag 120  Q
    ||||||||||| ||||||||||| |||| || || ||| ||||||| ||||||||||||||   |||| |||||  |||| |||||||||||||||| ||    
T  29346803 aagaagaagaagcaggtgaacaacgtgatgccttatagctttaacttagccggaatgaggacccgtgcacaaaagagtacctccaaagccgccttgacag 29346902  T
Q  121 atgcagaatagttggttcaattgcaacag-aaatctgagaataccaatacttttgttgaaattttcttagagagagtagtctttt 204  Q
    || || |||||||||| ||||||||| || | |  |||||||  ||||||||||||| |||||||| ||||||| | ||||||||    
T  29346903 atacataatagttggtccaattgcaagagtatagatgagaatgtcaatacttttgttaaaattttcatagagagggcagtctttt 29346987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 13897970 - 13898132
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||| ||||||||| ||||||| | |||||||  ||||||   | |||||| |||||| ||| |||||||||||| ||||| |||| |||||||| ||||    
T  13897970 aaagaaaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgt 13898069  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | | ||  ||| |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  13898070 gtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccaccta 13898132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 41189679 - 41189841
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||| |||||||| | |||||| | |||||||  ||||||||||  ||| |||||||||||   |||| |||||||| ||||    
T  41189679 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgt 41189778  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | |||||| |||||||||| |||||| ||||||||| ||  | ||||||||||||||    
T  41189779 gcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccaccta 41189841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 258 - 412
Target Start/End: Original strand, 51419276 - 51419430
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||| ||| | |||||| | |||||| | |||||||| ||||||||||  |||||||| ||||||   |||| |||||||| |||||    
T  51419276 aaggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 51419375  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
     ||| |  ||||| |||||||||||||||||||||||||||||| || |||||||    
T  51419376 cggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattg 51419430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 8076576 - 8076416
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| | |||||||  ||||||   |||||||| ||| || |||  ||||||||||||||| | |||| |||||||| |||||     
T  8076576 aggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 8076477  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | || ||||| |||||| |||||||||||||||||| || ||||||| |||||||||    
T  8076476 ggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccaccta 8076416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 11347840 - 11347999
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    |||||||| |||||||||| |||||||||| |||||| | | |||||| ||||||||||  |||||||||||||||   |||| |||||||| || ||      
T  11347840 ggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttatgca 11347939  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | |||||| ||||||||||||||||||||||| ||| || || ||||||| ||||||    
T  11347940 gggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcaccta 11347999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 14623757 - 14623916
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||||||  |||||  | | |||||||||| || |||  ||||||||||| ||||| |||| |||||||| |||||||    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtg 14623856  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     | | ||  ||| ||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  14623857 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccaccta 14623916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 251 - 419
Target Start/End: Complemental strand, 26754886 - 26754718
Alignment:
Q  251 ttaattaaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgt 350  Q
    ||||| ||||||||||||||||||||||  ||||||| | ||||||   ||||||||  |||   |||  ||||||||||||||| | |||| ||| |||    
T  26754886 ttaataaaaggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgt 26754787  T
Q  351 gtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||||| ||| | ||||||||||| |||||||||||||||||| |||  | |||||||||||||||||    
T  26754786 gcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccaccta 26754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 17470583 - 17470428
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||  ||||| |  |||||| | ||| ||||||  |||||||||| ||||   |||| |||||||| ||||||||| |    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggt 17470484  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  17470483 ccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccaccta 17470428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 35526681 - 35526503
Alignment:
Q  16 agagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgcctt 115  Q
    |||| ||||||||||| |||||||||||||||| || |||||| |||||||| |||||||||||||   |||| ||||| |||||   ||||| || |||    
T  35526681 agagtaagaagaagaagcaggtgaacaaagtgatgccttctagctttaactcggccggaatgaggacccgtgcccaaaagggtaccaacaaagacgtctt 35526582  T
Q  116 gatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagag 193  Q
    |  |||| || |||| ||||| ||||||||| |||| ||||| ||||   |||||||||||| |||||||| |||||||    
T  35526581 ggcagattcaaaataattggtgcaattgcaatagaatatctgggaatgttaatacttttgttcaaattttcatagagag 35526503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 264 - 421
Target Start/End: Complemental strand, 31456867 - 31456710
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||| ||| |||||||||| || ||| | |||||||| ||| ||||||  ||||| |||||||||   |||| |||||||| ||||| ||| |    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 31456768  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatg 421  Q
     ||  |||| ||||||||||||||||||||||||| || |||||||||||| ||||||    
T  31456767 ccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatg 31456710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 36331247 - 36331406
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||||| |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||| |    
T  36331247 ggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 36331346  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || |||| |||||||||||||||||||||| |||||||| |||||||||||    
T  36331347 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccaccta 36331406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 52629478 - 52629323
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| || ||||| | |||||| | |||||| | ||| ||||||  |||||||||| ||||   |||| |||||||| ||||  ||| |    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 52629379  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  52629378 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 52629323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 415
Target Start/End: Original strand, 24699870 - 24700027
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||||| |||||||  |||||  | | ||||||||||| | |||  ||||||||||||||| | |||| |||||||||||||    
T  24699870 aaaggaaaatgttacatagacatcttttattctcataca-tcttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgt 24699968  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
       || | || ||| ||||||| ||||||||| ||||||||| ||  ||||||||||||    
T  24699969 acagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgcca 24700027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 35536811 - 35536652
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||| | |||||||  |||||| | | |||||| ||| || |||  ||||||||||| ||||| ||||  ||||||| ||||    
T  35536811 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgt 35536712  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    ||  | | ||  ||||||||||||| |||||| ||||||||| ||  |||||||||||||    
T  35536711 gtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccac 35536652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 54868817 - 54868972
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||| | |||||| | ||||||||  || ||||||  |||||||||| ||||   |||| |||||||| ||||| ||| |    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || || || ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  54868917 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 54868972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 411
Target Start/End: Original strand, 30801648 - 30801802
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||| | |||||||  |||||| | |||||||| |||  | |||  |||||||||| |||| | |||| ||| |||| ||||    
T  30801648 aaaggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgt 30801747  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtatt 411  Q
    ||||| | ||| |||| || ||||| |||||||||||||| | || |||||||||    
T  30801748 gtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtatt 30801802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 51524866 - 51524988
Alignment:
Q  15 gagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgcct 114  Q
    ||||||||||||||||| |||||| | ||||||| || || ||| ||||||||||||||||||||||   |||| ||||| ||  | ||||||||  |||    
T  51524866 gagagaaagaagaagaagcaggtgcataaagtgaggccttatagctttaactcagccggaatgaggacccgtgcccaaaagggctcctccaaagctacct 51524965  T
Q  115 tgatagatgcagaatagttggtt 137  Q
    ||| ||||||| |||||||||||    
T  51524966 tgacagatgcaaaatagttggtt 51524988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 256 - 421
Target Start/End: Original strand, 1758373 - 1758537
Alignment:
Q  256 taaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttg 355  Q
    ||||| ||||||||||||| |||   |||||||  ||||||   |||||||| ||| ||||||  ||||||||||||||||| |||| ||| ||||||||    
T  1758373 taaagaaaaatgttacataaacactgtttattc--atacacctttgtacacc-catgcattaggaagagagaagaggagatgaaagagaaaatgtgtttg 1758469  T
Q  356 tgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaa--ggggtgtattgccacctatg 421  Q
    |||||  | || || ||||  |||||||||||||||||||||| ||  |||||||||||| |||||||    
T  1758470 tgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatg 1758537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 16893088 - 16893201
Alignment:
Q  27 aagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatgcag 126  Q
    ||||| ||||||||||||||||||| | |||| || |||||||||||||||||||   |||||||||| ||| | |||||||| ||||||  | || | |    
T  16893088 aagaagcaggtgaacaaagtgaagcctactaggttcaactcagccggaatgaggacccgtgctcaaaagggtgcctccaaagctgccttgccatataccg 16893187  T
Q  127 aatagttggttcaa 140  Q
    ||||||||||||||    
T  16893188 aatagttggttcaa 16893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 36707350 - 36707501
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||| |||||  | |||||||||||| ||||||  |||||||||||||||   |||| ||||||    || | |||||    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtg----tgcgcgggat 36707445  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || || || ||||||||||||||||||||| ||| || |||||||||| ||||||    
T  36707446 ccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcaccta 36707501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 48375626 - 48375783
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    ||||||||||||||||| |||||||| | |||||    ||||||||  |||   |||  ||||||||||||||| | |||| ||| |||| ||||| |||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 48375725  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     | |||||||||||  ||||||||||||| ||| | || |||||||||||| ||||||    
T  48375726 gtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcaccta 48375783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 388
Target Start/End: Complemental strand, 9563177 - 9563053
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||| | |||||||||| ||||||   |||||| ||||| ||||||  |||||||||||||||    ||| ||||||||||||||  ||||    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggat 9563078  T
Q  364 tcatgtgaccacgtgtcagattttt 388  Q
     || ||||| |||||||||||||||    
T  9563077 ccacgtgactacgtgtcagattttt 9563053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 11095379 - 11095430
Alignment:
Q  368 gtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  11095379 gtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 11095430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 35093767 - 35093608
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    |||||||||||| |||||||| |||||||  ||||||   |||||| ||||| || |||  |||||||| |  |||||||||| |||||||| |||| ||    
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatg 35093668  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |  ||||  ||||||| ||||||||||||| |||| ||| ||  | ||||||| ||||||    
T  35093667 gagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcaccta 35093608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 416
Target Start/End: Complemental strand, 42823295 - 42823137
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| | |||| |   |||||| | ||||||||||||  |||||  ||||||||||| | | | |||| ||||| |  || ||    
T  42823295 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagtatacttatg 42823196  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
     ||| | ||| ||||||| ||||| |||||| ||||||||| |||||||||||| ||||    
T  42823195 cggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccac 42823137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 27714888 - 27714968
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||| ||||| ||| | ||  |||| ||||||||||||||||||||||||| || ||||||||| |||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 27714968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 48587088 - 48587168
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||  ||||| ||||| || ||||| ||||||||||||||| ||| ||||| || |||||||||||||||||    
T  48587088 aagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccaccta 48587168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 416
Target Start/End: Original strand, 25395312 - 25395407
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    ||||| ||||| ||||| |||| ||| |||||||||||||| |  || |  |||| |||||||||||||||||||| ||||||| ||||| |||||    
T  25395312 agagaaaagagaagatgaaagagaaaatgtgtttgtgtggggtctatatagccacatgtcagatttttgtgtgggtattaagggatgtatggccac 25395407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 419
Target Start/End: Complemental strand, 11907488 - 11907394
Alignment:
Q  325 agaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||||||   |||| ||| |||| ||||| ||| | ||| ||||||| ||||||||||||||||| ||||| ||| |||||||| ||||||    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcaccta 11907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 43746524 - 43746422
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||| ||||||||||||| ||| ||||| ||   |||||| | |||||||||||| || |||  ||| ||||||||||||| |||| ||| |||||||||    
T  43746524 aaagaaaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaattgtgtttgt 43746425  T
Q  357 gtg 359  Q
    |||    
T  43746424 gtg 43746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 21746106 - 21746207
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||| |||||| |||||| ||||||   |||||| | ||||||||||||| ||| |  |||||||||| |||||| |||| |||||||| |||| ||    
T  21746106 ggaaaatattacatggacatcatttatttacatacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatg 21746205  T
Q  360 gg 361  Q
    ||    
T  21746206 gg 21746207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 45058469 - 45058629
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| | |||| |   ||||||   |||||||| |||  |||||  ||||||||||| ||| | |||| ||||| |  |||||    
T  45058469 aaggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 45058568  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||| | ||| ||  ||| |||||||||||| ||||||||| || |||||||||||||||||    
T  45058569 cggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccaccta 45058629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 41080828 - 41080737
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgc 413  Q
    ||||||||||||||||| |||| ||| |||| ||||||||| | ||  ||||||| | ||||||||||| |||||||| || |||||| ||||    
T  41080828 agagagaagaggagatgaaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgc 41080737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 411
Target Start/End: Original strand, 35965700 - 35965843
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||||||  |||||| | ||||||||||||  ||||   | ||| ||||||||| | |||| |||||||| |||||      
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgca 35965799  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtatt 411  Q
    ||||        ||||||||||||||||| ||||||||| || || ||||||    
T  35965800 ggat--------ccacgtgtcagatttttatgtgggtgtcaaaggatgtatt 35965843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 49106995 - 49106934
Alignment:
Q  178 aaattttcttagagagagtagtctttttagtctttatttagccaagaatggtcatacttttga 240  Q
    |||||||| |||||||||||||| |||||||| || ||   ||||||||||||||||||||||    
T  49106995 aaattttcatagagagagtagtc-ttttagtcgttgttagaccaagaatggtcatacttttga 49106934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 31067172 - 31067241
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcag-ccggaatgagga 81  Q
    |||||| |||||||||||| || ||| ||||||||| |||| |||| |||||||||| | ||||||||||    
T  31067172 cagagaaaaagaagaagaagcatgtgcacaaagtgaggcttgctagctttaactcagtcgggaatgagga 31067241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 25413784 - 25413836
Alignment:
Q  352 tttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggg 404  Q
    |||||||||| | || || ||||||||||||| |||||||||||||| |||||    
T  25413784 tttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaaggg 25413836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 26796943 - 26796875
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgagga 81  Q
    ||||||||||||||||||| || || ||||||||||||  | | || |||||||||| || ||||||||    
T  26796943 cagagagaaagaagaagaagcatgttaacaaagtgaagtctaccagctttaactcagtcgaaatgagga 26796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 32605897 - 32605941
Alignment:
Q  325 agaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgt 369  Q
    ||||||||||||| ||||||||||||| |||||| |||| |||||    
T  32605897 agaagaggagatgaaagaaaaagtgtgcttgtgttggatccatgt 32605941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 47191023 - 47190960
Alignment:
Q  352 tttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||| | || || ||||| ||||||| ||||||||||||| ||| ||||||||||||||    
T  47191023 tttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtg-taaagggtgtattgccac 47190960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 53581835 - 53581792
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  53581835 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 53581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 32813429 - 32813270
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||||||| |||||| | |||||||| ||||||||||  |||||||||||||||   |||| |||||||| ||||| |    
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32813329 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccaccta 32813270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 51898601 - 51898760
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| |||||||| |||||||| | |||||||| ||| || |||  ||||||||||||||| | || | |||||||| ||||| |    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 51898700  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  51898701 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 51898760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 37649376 - 37649221
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||||||||||||   |||  |||||||| ||||| || ||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaat 37649277  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| ||||||||||||||||||||||||||||||| || | |||||||||||||||    
T  37649276 tcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccaccta 37649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 415
Target Start/End: Complemental strand, 41758983 - 41758832
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||  |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||||||||| ||| |    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
     |||||||| ||||||||||||||||||||| ||| || |||||||||||||    
T  41758883 ccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgcca 41758832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 14344068 - 14344267
Alignment:
Q  29 gaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatgcagaa 128  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||||||| || | |||  ||||| ||||| ||||||| || ||||| |||| ||  |    
T  14344068 gaaacaggtgaacaaagtgaagccttctagttttaactcaatcggaatgatgactcgtgtccaaaagggtacctccaaagtcgacttgacagataca-ta 14344166  T
Q  129 tagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtctttatttagccaagaatg 227  Q
    ||||||| |||||||||| | || ||||| ||||| ||||||||||||| || |||| ||||||||||| ||| |||||||| || ||| ||||||||||    
T  14344167 tagttgg-tcaattgcaataaaatatctgggaatatcaatacttttgttcaattttttttagagagagtggtc-ttttagtcgttgtttggccaagaatg 14344264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 12 - 204
Target Start/End: Complemental strand, 13062086 - 13061893
Alignment:
Q  12 acagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccg 111  Q
    ||||||| |||||||||||| |||||||||||||||| || || ||| ||||||||||||| ||||||||   ||||| ||||  |||| ||||||||||    
T  13062086 acagagaaaaagaagaagaagcaggtgaacaaagtgatgccttttagctttaactcagccgaaatgaggacccgtgctgaaaagagtacctccaaagccg 13061987  T
Q  112 ccttgatagatgcagaatagttggttcaattgcaacag-aaatctgagaataccaatacttttgttgaaattttcttagagagagtagtctttt 204  Q
    |||||| | || ||||||| ||||| ||||||||| || | |  || ||||   |||||||||||| |||||||| ||||||| ||||||||||    
T  13061986 ccttgacaaatacagaataattggtccaattgcaaaagtatagatgggaatgttaatacttttgttcaaattttcatagagagggtagtctttt 13061893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 274 - 419
Target Start/End: Original strand, 38632253 - 38632398
Alignment:
Q  274 agacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgacc 373  Q
    ||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||||||||||||   ||||||||||||| ||||| ||| | || |||||     
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgact 38632352  T
Q  374 acgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||    
T  38632353 acgtgtcagatttttgtgtggatgttaaaaggtgtattgccaccta 38632398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 9474798 - 9474953
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||  ||||||||  |||||| | |||||| | ||| ||||||  |||||||||||||||   |||| |||||||||||||| ||| |    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  9474898 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 9474953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 27564657 - 27564812
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||  ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  27564757 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 27564812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 45044475 - 45044637
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    ||||||||||||||| |||||||| |||||||  |||||| | |||||||| ||||||||||  ||||||||||| |||   |||| ||| |||||||||    
T  45044475 aaaggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgtttgt 45044574  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | |||||| | || |||||||||||||| ||||||| ||  ||||||||||||||||    
T  45044575 gcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccaccta 45044637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 2582093 - 2581938
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||| ||| |||||||||  |||||| | ||||||||||||  |||||  |||||||||||||||   || | |||||||| ||||| ||| |    
T  2582093 aatgatacataaacaccctttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggt 2581994  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  2581993 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 2581938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 3000497 - 3000342
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||||| ||||| | |||||| | |||||||| |||| |||||  |||||||||| ||||   |||| |||||||| ||||  ||| |    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 3000398  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  3000397 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 3000342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 38595332 - 38595177
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||||| ||||| | |||||| | |||||||| |||| |||||  |||||||||| ||||   |||| |||||||| ||||  ||| |    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 38595233  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  38595232 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 38595177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 48716204 - 48716359
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||| ||| ||||||  ||||||||||||| |   |||| |||||||| ||||| ||| |    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||| ||| ||  ||||||||||||||||    
T  48716304 ccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccaccta 48716359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 258 - 412
Target Start/End: Complemental strand, 26440908 - 26440764
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||   |||||||||   ||||||||          |||| |||||||| || ||    
T  26440908 aaggaaaatgttacataaacatcctttattcctatacacccttgtacattccatacattacgaagagagaa----------aagagaaagtgtgcttatg 26440819  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
     ||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  26440818 cgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattg 26440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 47452242 - 47452397
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||  ||||||||| |||||  | |||||||| ||| || |||  |||||||||||||||   |||| |||||||| ||||| |||||    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 47452341  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| |||||| |||||||||||||||||| || ||||||||| |||||||    
T  47452342 ccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccaccta 47452397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 3374307 - 3374432
Alignment:
Q  20 aaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgata 119  Q
    |||||||||||| || ||||||||||||||||   |||| ||||||||||||||||||||||  ||||| ||||| ||||  |||||||| ||||||  |    
T  3374307 aaagaagaagaagcaagtgaacaaagtgaagccggctagatttaactcagccggaatgaggacatgtgcccaaaagggtagctccaaagctgccttggaa 3374406  T
Q  120 gatgcagaatagttggttcaattgca 145  Q
    | | |||||||||||||| |||||||    
T  3374407 gctacagaatagttggtttaattgca 3374432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 37926356 - 37926515
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||| ||| ||||||| | |||||||  |||||  | |||||||| ||||||||||  ||||||||||| |||   |||| |||||||  ||||  |    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacg 37926455  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||| ||||||||||||||||| ||||||||||||  | ||||||||||||||    
T  37926456 ggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccaccta 37926515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 416
Target Start/End: Complemental strand, 44454165 - 44454005
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtac----acctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttg 355  Q
    ||||||||||||||| ||| | ||||||| ||||||| | | |||    ||| ||| ||||||  |||||||||| |||| | ||||||||||||| |||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttg 44454066  T
Q  356 tgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||| || || ||||| |||||||||||||||||||| | ||| | |||||||||||    
T  44454065 tgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccac 44454005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 50590918 - 50591077
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||| | | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||| |    
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  50591018 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 50591077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 258 - 416
Target Start/End: Original strand, 5958916 - 5959074
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    |||||||||||||||||||||   |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  |||||    
T  5958916 aaggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 5959015  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
     ||| | ||| ||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  5959016 cggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccac 5959074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 49811447 - 49811604
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    ||||||||||||||||| |||||||||  |||||| | ||| |||| ||||||||||  |||||||||||||||   |||| |||||||| ||||| ||     
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgga 49811546  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     |  || || | ||||||||||||||||||||| ||| ||  ||||||||| ||||||    
T  49811547 gtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcaccta 49811604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 264 - 412
Target Start/End: Complemental strand, 43310 - 43162
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||| | ||||||||| ||||||| | |||||||| ||| ||||||  ||||||| |||||||   |||| |||||||| ||||| ||  |    
T  43310 aatgatacatagataccctttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagt 43211  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
     || ||||| ||||||||||||||||||||||||| || || |||||||    
T  43210 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattg 43162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 17114838 - 17114707
Alignment:
Q  12 acagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccg 111  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||| |||||||| ||| |||||||||    ||  ||||| ||||| |||||||| |    
T  17114838 acagagagaaagaagaagaaacatgtgaacaaagtgaagcctgctagctttaactctgccagaatgaggacccatgtccaaaagggtacctccaaagcgg 17114739  T
Q  112 ccttgatagatgcagaatagttggttcaattgc 144  Q
    |||||  || |  ||||||||||||||||||||    
T  17114738 ccttg-cagctatagaatagttggttcaattgc 17114707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 44163744 - 44163661
Alignment:
Q  152 atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtctttatttagccaagaatggtcatacttt 237  Q
    ||||| ||||||||||||||||| | | |||||||||||||||||||  ||||||||| || ||| ||||||||||||||||||||    
T  44163744 atctgggaataccaatacttttgatcatattttcttagagagagtag--tttttagtcgttgtttggccaagaatggtcatacttt 44163661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 419
Target Start/End: Complemental strand, 50630629 - 50630481
Alignment:
Q  271 catagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtg 370  Q
    |||||||| | |||||||  |||||| | ||||||||  || ||||||  |||||||||||||||   |||| |||||||| ||||| ||| | || |||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtg 50630530  T
Q  371 accacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || |||||||||||||||||||||||   || || ||||||||||||||    
T  50630529 actacgtgtcagatttttgtgtgggtaacaaaggatgtattgccaccta 50630481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 259 - 398
Target Start/End: Original strand, 3302450 - 3302589
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||| ||| ||||||||||||   |||||| | ||||||||  ||| ||| |  |||||||||| |||||| || | |||||||| |||| |    
T  3302450 aggaaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtat 3302549  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
    ||| | ||| |||  |||||||||||||||||||||||||    
T  3302550 ggggtccatatgattacgtgtcagatttttgtgtgggtgt 3302589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 50903605 - 50903467
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    ||||| ||||| ||||||| ||||||||||||||||||| | |||| || |||||||||| ||||||||   |||| ||||  ||||| ||||||||||     
T  50903605 cagagtgaaagcagaagaagcaggtgaacaaagtgaagcctactagcttcaactcagccgaaatgaggacccgtgcccaaagcggtacctccaaagccga 50903506  T
Q  113 cttgatagatgcagaatagttggttcaattgcaacagaa 151  Q
    ||||  | || | || |||||||||| ||||||| ||||    
T  50903505 cttggcatataccgattagttggttccattgcaagagaa 50903467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 419
Target Start/End: Complemental strand, 47748626 - 47748466
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| ||||| |  |||||    
T  47748626 aaggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 47748527  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||||| ||| || |||| |||||||||||| | ||||||| || |||||||||||||||||    
T  47748526 cgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccaccta 47748466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 41608411 - 41608570
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| | |||| |   |||||| | ||||||||  ||  |||||  ||||||||||| ||| | |||| |||||||  ||||  |    
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacg 41608510  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || |||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  41608511 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccaccta 41608570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 419
Target Start/End: Original strand, 44548342 - 44548453
Alignment:
Q  308 tcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtg 407  Q
    |||| ||||||  |||||||||| ||||   |||| |||||||| ||||| ||| | || ||||| ||||||||||||||||||||||| | ||  ||||    
T  44548342 tcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtg 44548441  T
Q  408 tattgccaccta 419  Q
    ||||||||||||    
T  44548442 tattgccaccta 44548453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 750302 - 750239
Alignment:
Q  352 tttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||| | ||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  750302 tttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 8346385 - 8346465
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||| |||||  || | || ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  8346385 aagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta 8346465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 41035148 - 41035080
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgagga 81  Q
    |||||| |||||||||||| |||||||| |   |||||| |||||| ||||||||||||||||||||||    
T  41035148 cagagaaaaagaagaagaagcaggtgaatattttgaagccttctagctttaactcagccggaatgagga 41035080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 6261052 - 6260893
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| | ||||||   ||||||   ||||||||  ||| | |||  ||||||||||||||| | || | ||| |||| || || |    
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | || |||||||| ||| |||||||| |||||||||| ||||||||||| |||||||    
T  6260952 gggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccaccta 6260893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 11152293 - 11152455
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||| ||||||| | |||||||  |||||  | | |||||| ||| || | |  ||||||||||||||| | || | |||| ||| ||||    
T  11152293 aaaggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgt 11152392  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| |  |  |||| ||||||||||||||||||||| |||  | |||||||||||||||||    
T  11152393 gcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccaccta 11152455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 49491998 - 49491873
Alignment:
Q  17 gagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttg 116  Q
    ||||||| ||||||| || ||||||||||||| || | |||| || |||||||||||||||||||   |||| ||||| ||||| |||||||  ||||||    
T  49491998 gagaaagcagaagaagcatgtgaacaaagtga-gcctactagcttcaactcagccggaatgaggacccgtgcccaaaagggtacctccaaagttgccttg 49491900  T
Q  117 atagatgcagaatagttggttcaattg 143  Q
        || | ||||||||||||||||||    
T  49491899 gcgtataccgaatagttggttcaattg 49491873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 13414864 - 13414791
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    |||| ||| |||| ||||||||| | || ||||| |||||| |||||||||||||||||| || ||||||||||    
T  13414864 aagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 416
Target Start/End: Complemental strand, 26274607 - 26274458
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | ||| || ||||| ||||||  ||||||||||| |||   ||||||||||||  |||||  ||||    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaagag-agaa--aagaaaaagtgtacttgtgcaggat 26274511  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
     || ||||| | ||||||||||||| ||||| ||| ||  | |||||||||||    
T  26274510 ccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccac 26274458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 19394250 - 19394182
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgagga 81  Q
    |||||| |||||||||||| || |||| ||||||||||| |||| | ||||||| ||| ||||||||||    
T  19394250 cagagaaaaagaagaagaagcatgtgagcaaagtgaagccttcttgctttaacttagctggaatgagga 19394182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 4401451 - 4401494
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  4401451 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 4401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 7447948 - 7447991
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  7447948 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 7447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 50448237 - 50448194
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  50448237 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 50448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 7e-38; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 259 - 415
Target Start/End: Original strand, 43414498 - 43414654
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| |||||||| | |||||| | |||||||| ||||||||||  |||||||||||||||   |||| |||||||| |||||     
T  43414498 aggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 43414597  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
    ||||| ||||||||||||||| |||||||||||||||||| || |||||| ||||||    
T  43414598 gggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgcca 43414654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 5958011 - 5957853
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    |||||||||||||| ||| |||||||||  |||||| | |||||||||||| || |||  ||||||||||||||| | |||| |||||||| ||||| ||    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgg 5957912  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  5957911 gatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 5957853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 37038661 - 37038502
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| |||||||| |||||||| | |||||||| ||| || |||  ||||||||||||||| | || | |||||||| ||||| |    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 37038562  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  37038561 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 37038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 15048098 - 15048258
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagat-gcaagaaaaagtgtgtttgtg 357  Q
    |||||||||||| ||||||| |||||||||| |||||| | |||||| | ||||||||||  ||||||||||||||||   |||| |||||||| |||||    
T  15048098 aggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtg 15048197  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||| | |||||| | ||||||||||||||||||| ||||| || |||||||||||||||||    
T  15048198 cggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccaccta 15048258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 14548100 - 14547945
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||  | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  14548000 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta 14547945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 263 - 419
Target Start/End: Original strand, 40423864 - 40424020
Alignment:
Q  263 aaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggga 362  Q
    ||||| |||||||||| | |||||||| |||||| | ||||||||||||  |||||  |||||||||||||||   |||| |||||||| ||||| |||     
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  363 ttcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||  |||| ||||||||||||||||||||| ||| || |||||||||||||||||    
T  40423964 tccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 40424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 4854781 - 4854940
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    |||||||||||||||||||  ||||||||  ||| || | |||||| | ||||||||||| |||||||||||||||   |||| |||||||| |||||      
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | |||||| |||| | |||||||||| ||| |||||||| |||||||||||||||||    
T  4854881 gggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccaccta 4854940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 8841350 - 8841509
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||||||  |||||| | |||||||| ||| || |||  | ||||||||||||| | |||| |||||||| ||||| |    
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcg 8841449  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | || ||||| |||||| |||||||||||||||||| || ||||||| |||||||||    
T  8841450 gggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccaccta 8841509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 12831225 - 12831070
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||  |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||| ||||||    
T  12831125 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcaccta 12831070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 15197511 - 15197356
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||   |||||||| |||||| | |||||||||||| |||| |  ||||| |||||||||   |||| |||||||| ||||| ||| |    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  15197411 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 15197356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 34012218 - 34012373
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||   ||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| |||||    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 34012317  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| |||||||| |||||||||||||||| || ||||||||| |||||||    
T  34012318 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccaccta 34012373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 34307394 - 34307239
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    ||||||||||||||| | |||| |   |||||| | |||||||| |||| |||||  ||||||||||| ||| | |||| |||||||  ||||| ||| |    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| || |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  34307294 tcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 34307239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 264 - 398
Target Start/End: Complemental strand, 9122363 - 9122229
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||| ||||||||| |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| |||||    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 9122264  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
     || ||||| || ||||||||||||||||||||||    
T  9122263 ccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 27786908 - 27786783
Alignment:
Q  15 gagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgcct 114  Q
    |||||||||||||| || ||| |||| |||||||||| |||||| ||||||||||||||||||||||   |||| ||||||||| | ||||||||  |||    
T  27786908 gagagaaagaagaataagcagatgaataaagtgaagccttctagctttaactcagccggaatgaggagccgtgcccaaaatggttcctccaaagctacct 27786809  T
Q  115 tgatagatgcagaatagttggttcaa 140  Q
    ||| |||| || ||||||||||||||    
T  27786808 tgacagatacaaaatagttggttcaa 27786783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 29369107 - 29369292
Alignment:
Q  20 aaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgccttgata 119  Q
    |||||||||||| || ||||| ||||||| || ||| || ||||||| |||| |||||||||   |||| ||||| | ||| |||||| ||||||||  |    
T  29369107 aaagaagaagaagcacgtgaataaagtgatgccttcaagctttaactgagccagaatgaggacccgtgcccaaaaggatacatccaaatccgccttggca 29369206  T
Q  120 gatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatacttttgttgaaattttcttagagagagtagtctttt 204  Q
    ||| ||||||||||||| ||||||||  |||| ||| ||||||  |||| |||||||| |||||||| ||||||| ||||||||||    
T  29369207 gatacagaatagttggtccaattgcattagaatatccgagaatgtcaatgcttttgttcaaattttcatagagagggtagtctttt 29369292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 504043 - 504198
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||  |||||| | |||||||| ||| ||||||  |||||||||| ||||   |||| || ||||| ||||| ||| |    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  504143 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 504198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 272 - 419
Target Start/End: Original strand, 1179870 - 1180017
Alignment:
Q  272 atagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtga 371  Q
    |||||||||||||||||| ||| |  | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| || || ||  |||    
T  1179870 atagacatcctttattcccatatatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatga 1179969  T
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||||||||||||||||||||||||| || ||||||||| |||||||    
T  1179970 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 1180017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 264 - 416
Target Start/End: Original strand, 23122519 - 23122671
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||  |||||| | |||||||| ||| ||||||  |||||||| ||||||   |||| |||||||| || || ||| |    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
     || ||||| ||||||||||||||||||||||||| ||  |||||||||||||    
T  23122619 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccac 23122671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 260 - 412
Target Start/End: Original strand, 10284549 - 10284701
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | ||||||| ||||||  | |||||||| ||| || |||  |||||||||| || | | |||| |||||||| ||||| |    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcg 10284648  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    || | || ||||| |||||||| |||||||||||||||| || | ||||||||    
T  10284649 gggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattg 10284701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 42221698 - 42221538
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||| ||| ||||||||||||   |||||| | ||||||||  ||| ||| |  |||||||||| |||||| |||| |||||||| |||| |    
T  42221698 aggaaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtat 42221599  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | ||| |||  |||||||||||||||||||||||||  |||  ||||||| ||||||    
T  42221598 ggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcaccta 42221538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 300 - 419
Target Start/End: Complemental strand, 16383519 - 16383400
Alignment:
Q  300 tgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgtt 399  Q
    |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||| ||| | ||| || |||| ||||||||||||||||||||||     
T  16383519 tgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtc 16383420  T
Q  400 aaggggtgtattgccaccta 419  Q
    ||||||||||||||||||||    
T  16383419 aaggggtgtattgccaccta 16383400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 10621066 - 10621164
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||||||||||   |||| |||||||| ||||| |||||  ||||| | ||||||||||||||||||||||||| || ||||||||| |||||||    
T  10621066 agagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 10621164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 17444005 - 17443848
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    ||||||||||||||||| |||||||    |||||  | |||||| ||||| || | |  ||||||||||| ||||| |||| ||||||| ||||||||||    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggg 17443906  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     | ||  |||| || ||||||||||||||||| ||||||||  |||||||| ||||||    
T  17443905 gtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcaccta 17443848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 24307715 - 24307870
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    ||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||| ||| |    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||| || |||| | |||||||||||||||||||| ||||| ||||||||||||||    
T  24307815 ccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccaccta 24307870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 257 - 388
Target Start/End: Original strand, 42354503 - 42354634
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||| | |||||||  |||||| | | |||||| ||| || |||  ||||||||||| ||||| |||| |||||||| || |    
T  42354503 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgcttat 42354602  T
Q  357 gtgggattcatgtgaccacgtgtcagattttt 388  Q
    ||| ||| ||  ||| ||||||||||||||||    
T  42354603 gtgagatccacatgaacacgtgtcagattttt 42354634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 44507010 - 44507164
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||||  |||||||  |||||| | |||||||| ||| ||||||  |||||||||| ||||   |||| ||||| || ||||  ||| |    
T  44507010 aatgatacatagacata-tttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggt 44507108  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  44507109 ccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccaccta 44507164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 412
Target Start/End: Original strand, 16056322 - 16056471
Alignment:
Q  263 aaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggga 362  Q
    |||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||| |||     
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  363 ttcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    | ||| || |||| |||||||||||||||||||||| ||||| |||||||    
T  16056422 tccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattg 16056471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 32032906 - 32032748
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | ||||||||||||  |||||  ||||||||||| ||  | |||| |||||||  |||||      
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgca 32032807  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| ||| || |||| |||||||||||||||||| ||| || || ||||||||||||||    
T  32032806 ggatccatatggccacatgtcagatttttgtgtggatgtcaa-ggatgtattgccaccta 32032748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 399843 - 399778
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatga 78  Q
    |||||||||||||||||||||| ||||||||||||| | || |||| ||||| |||| ||||||||    
T  399843 cagagagaaagaagaagaaacatgtgaacaaagtgaggtttgctagctttaattcagtcggaatga 399778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 415
Target Start/End: Original strand, 15258845 - 15259002
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| |||||||| | ||||||   |||||| |  |||   |||  ||||||||||||||| | |||| ||| |||| |||||    
T  15258845 aaggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 15258944  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
      || | || |||||||| |||||||||||| ||||| |||  |||| ||||||||||    
T  15258945 cagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgcca 15259002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 36206543 - 36206475
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgagga 81  Q
    ||||||||||||||||||| ||  |||| |||||||||| |||||| ||||||| || |||||||||||    
T  36206543 cagagagaaagaagaagaagcaaatgaataaagtgaagccttctagctttaacttagtcggaatgagga 36206475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 25838370 - 25838275
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||| |||||||||| | |||||  | ||||||||  |||||||||  | |||||||||||||   ||||||||||||| ||||    
T  25838370 gaaaatgttacatagatatcctttattgccatacaaccttgtacaccctatacattagcaaaagagaagaggagagaaaagaaaaagtgtgcttgt 25838275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 30479396 - 30479551
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    ||||||||||||||| | |||| |   |||||| | ||||||||||||  |||||  ||||||||||| ||| | |||| |||||||  ||||| | | |    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgaggt 30479495  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     ||| |  |||| |||||||||||| ||||| ||| || |||||||||||||||||    
T  30479496 ccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccaccta 30479551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 42710216 - 42710287
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggaga 335  Q
    |||| |||| ||||| |||||||||| |||||| | |||||||| ||||||||||  |||||||||||||||    
T  42710216 aatgatacacagacaccctttattcccatacacccttgtacaccccatacattaggaagagagaagaggaga 42710287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 8831345 - 8831264
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaa 94  Q
    |||||| | |||||||||| ||  |||||||||||| || | |||| ||||||||||||||||||||||   ||||||||||    
T  8831345 cagagaaagagaagaagaagcacatgaacaaagtgaggcctgctagctttaactcagccggaatgaggacccgtgctcaaaa 8831264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 2547099 - 2547162
Alignment:
Q  352 tttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| || ||  |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  2547099 tttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 2547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 2165960 - 2165908
Alignment:
Q  352 tttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggg 404  Q
    |||||||||| |||| ||  |||||||||||| |||||||||||||| |||||    
T  2165960 tttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgtaaaggg 2165908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 24307692 - 24307652
Alignment:
Q  379 tcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccaccta 24307652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 29705485 - 29705528
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  29705485 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 29705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 848 - 1006
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    |||||||||||||| ||| |||||||||| |||||| | |||||||| ||| || |||  ||||||||||||||| | |||| |||||||| ||||| ||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||| ||||| ||||||||| ||||||||||| |||||| |||||||||||||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccaccta 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 848 - 1006
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    |||||||||||||| ||| |||||||||| |||||| | |||||||| ||| || |||  ||||||||||||||| | |||| |||||||| ||||| ||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||| ||||| ||||||||| ||||||||||| |||||| |||||||||||||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccaccta 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 75 - 240
Target Start/End: Original strand, 34547939 - 34548104
Alignment:
Q  75 atgaggatttgtgctcaaaatggtacttccaaagccgccttgatagatgcagaatagttggttcaattgcaacagaa-atctgagaataccaatactttt 173  Q
    ||||||| |||||||||||| ||||| |||||| || | |||   ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  34547939 atgaggacttgtgctcaaaagggtacctccaaaacctctttggccgatacagaatagttggttcaagtgcaacagaatatctgagaataccaatactttt 34548038  T
Q  174 gttgaaattttcttagagagagtagtctttttagtctttatttagccaagaatggtcatacttttga 240  Q
    ||  |||||||| |||||||||||||| |||||||| || ||  |||||||||||||||||||||||    
T  34548039 gtgcaaattttcatagagagagtagtc-ttttagtcgttgttaggccaagaatggtcatacttttga 34548104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 35523061 - 35522902
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||| ||| | |||||||| |||||| | |||||||| ||||||||||  |||||||||| ||||   |||| |||||||| ||||    
T  35523061 aaaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgt 35522962  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    | ||||| ||| || ||||||||||||||||||||||||||||||  |||||||||||||    
T  35522961 gcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccac 35522902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 46033719 - 46033878
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||||||  |||||| | |||||||| ||||||||||  | |||||||||||||   |||| ||| | || ||||| |    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcg 46033818  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |  |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  46033819 gagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccaccta 46033878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 261 - 412
Target Start/End: Original strand, 16374743 - 16374894
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    |||||||||||||||||| |||||||||  ||||||   |||||||  ||||||||||  |||||||| | |||||| |||| || ||||| |||||||     
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtga 16374842  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
    ||| || ||||||||||||||||||||||||||| ||| ||||| |||||||    
T  16374843 gatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 19330020 - 19329865
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||  ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  19329920 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 19329865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 415
Target Start/End: Original strand, 4999436 - 4999587
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||  |||||| | |||||||| ||| ||||||  ||||||||||||||||  |||| |||||||||||||| ||| |    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
     || ||||| |||| |||||||||||||||||||| ||  ||||||||||||    
T  4999536 ccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgcca 4999587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 7389566 - 7389412
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| ||||||||||||||||||||| |||||| |||||||||| |||  |||||  |||||||  ||||||   |||| |||||||| ||||| ||| |    
T  7389566 aatgatacatagacatcctttattcccatacac-cctgtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggt 7389468  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||||| || | |||||||||||||||    
T  7389467 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccaccta 7389412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 8080305 - 8080460
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||||| |||||| | |||||||| ||| || |||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||| ||| ||||| || |||||||||||||||||    
T  8080405 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccaccta 8080460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 32564341 - 32564503
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    ||||||| |||||||||||||||  |||| |   |||||| | ||||||||||||  |||||  ||||||||||| ||| | |||| ||||||| |||||    
T  32564341 aaaggaagatgttacatagacatattttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgt 32564440  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | ||| |  |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  32564441 gcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 32564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 22343543 - 22343384
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | ||||||||||||  |||||  ||||||||||| ||| | |||| |||||||  ||||| |    
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| ||  ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  22343443 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 22343384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 38837395 - 38837240
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| |||||||| | |||||| | |||||| | ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38837296  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||| |||||  | |||||||||||||||||    
T  38837295 ccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccaccta 38837240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 18207300 - 18207203
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||||||||| |||| |||||||| ||||||||| |||| ||| |||||||| |||||||||| ||||||| ||| ||||||||||||||||    
T  18207300 agagagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccaccta 18207203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 31736060 - 31735907
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||| ||||| | | |||||||| |||||| | |||||||| ||||||||||  |||||||||||||||   |||| |||||||| |||||     
T  31736060 aggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 31735961  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||| |||||| |||||||       |||||||||||||||| | |||||||||||||||    
T  31735960 gggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccaccta 31735907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 41915921 - 41915764
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    ||||||||||||||||| | |||| |   |||||| | |||||||| |||| |||||  ||||||||||| ||| | |||| |||||||  ||||| |||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     | ||| || |||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  41915821 gtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccaccta 41915764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 279 - 419
Target Start/End: Complemental strand, 3784158 - 3784018
Alignment:
Q  279 tcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtg 378  Q
    ||||||||||  |||||  | |||||||| ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||||| || ||||| |||||    
T  3784158 tcctttattcacatacattcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtg 3784059  T
Q  379 tcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||||||||||||||| ||  | ||||||||||||||    
T  3784058 tcagatttttgtgtgggtgtcaaaagatgtattgccaccta 3784018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 21234584 - 21234424
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    |||||||||||||||||||| | |||||||  ||||||   |||||||| ||||||||||  |||||| | |||||| | |||| ||| |||| |||||     
T  21234584 aggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgc 21234485  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||| | |||||| | |||||||| ||||||||||| |||| || |||||||||| ||||||    
T  21234484 ggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcaccta 21234424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 419
Target Start/End: Complemental strand, 35137684 - 35137556
Alignment:
Q  291 atacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgt 390  Q
    |||||| | |||||| | ||| ||||||  |||||||||||||||   |||| |||||||||||||| ||| | || ||||| |||||| ||||||||||    
T  35137684 atacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgt 35137585  T
Q  391 gtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||| || |||||||||||||||||    
T  35137584 gtgggtgtcaaagggtgtattgccaccta 35137556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 419
Target Start/End: Complemental strand, 8238398 - 8238236
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||||  | |||| |   |||||| | |||||||| |||  |||||  ||||||||||| ||| | |||| |||||||  ||||    
T  8238398 aaaggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 8238299  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | ||| |||| || |||||||||||||||||||||| || |||||||||||||||||    
T  8238298 gcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 8238236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 426
Target Start/End: Original strand, 2318160 - 2318327
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgaga--gagaagaggagatgcaagaaaaagtgtgtttgtgt 358  Q
    ||||||||||||||||||  ||||||| | ||||||   |||||||  ||| |||||| ||||  ||||||| |||||| |||| ||||| || || |||    
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgcttatgt 2318259  T
Q  359 gggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatgattgt 426  Q
     || | || ||||||||  ||||||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  2318260 cgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgt 2318327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 419
Target Start/End: Complemental strand, 3694518 - 3694390
Alignment:
Q  291 atacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgt 390  Q
    |||||| | |||||||| ||| |||| |  |||||||||||||||   |||| |||||||| ||||| ||||| ||  |||| |||||||||||||||||    
T  3694518 atacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgt 3694419  T
Q  391 gtgggtgttaaggggtgtattgccaccta 419  Q
    |||||||||||  ||||||||| ||||||    
T  3694418 gtgggtgttaaaaggtgtattgtcaccta 3694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 19407958 - 19407866
Alignment:
Q  21 aagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgcc 113  Q
    ||||||||||| ||||||||||||||||  | |||||| ||||||||||||||||||||||   |||| ||||| ||||| ||||||||||||    
T  19407958 aagaagaagaagcaggtgaacaaagtgattccttctagctttaactcagccggaatgaggacccgtgcccaaaagggtacctccaaagccgcc 19407866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 40957885 - 40957730
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| || |||||   |||||| | |||||||| ||| ||||||  |||||||||| ||||   |||| |||||||| ||||  |||||    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggat 40957786  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||||||||||| | || | |||||||||||||||    
T  40957785 ccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccaccta 40957730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 419
Target Start/End: Original strand, 19436114 - 19436264
Alignment:
Q  269 tacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatg 368  Q
    |||||||||| | |||||||  |||||| | |||||||| ||| ||||||  ||||| ||||| |||   |||| |||||||| || || ||||| || |    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacg 19436213  T
Q  369 tgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| ||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  19436214 tgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcaccta 19436264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 419
Target Start/End: Complemental strand, 3434665 - 3434585
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||| ||||| ||||| || ||||| ||||||||| ||||||||||||||| || |||||||||||||||||    
T  3434665 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccaccta 3434585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 412
Target Start/End: Original strand, 32951415 - 32951563
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| || ||||||  |||||| | |||||||| |||  |||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32951514  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
     || ||||| |||||| |||||||||||||| |||||| || |||||||    
T  32951515 ccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattg 32951563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 36361910 - 36361990
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||| ||||||||| | || ||||| ||||||||||||||||||||||||| || || ||||||||||||||    
T  36361910 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccaccta 36361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 412
Target Start/End: Complemental strand, 38267218 - 38267070
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||| ||| |||||| | ||||||    ||||| | ||| ||||||  |||||||||||||||   |||| |||||||| ||||| ||| |    
T  38267218 aatgatacatagatatcatttatttccatacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38267119  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattg 412  Q
     || ||||| ||||||||||||||||||||||||| || ||||||||||    
T  38267118 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg 38267070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 26296826 - 26296667
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    |||||||||||| |||||| | | |||| | |||||| | ||||||||||||||||||   |||||||||||||||   |||| ||| || | ||||| |    
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || |||||| |||||||||| ||||| |||||| |||| ||||| ||||||    
T  26296726 gggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcaccta 26296667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 38044379 - 38044220
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||||||| | |||| |   |||||| | |||||||| |||  |||||  ||||| ||||| ||| | |||| |||||||  ||||| |    
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    || | ||| || | || |||||||||||||||||| ||| ||||||||||||||||||||    
T  38044279 gggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccaccta 38044220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 260 - 411
Target Start/End: Complemental strand, 41423864 - 41423713
Alignment:
Q  260 ggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtg 359  Q
    ||||||||||||||| ||| |||||||||  ||||||   |||||||| ||| || |||  ||||||||||||||||| |||| ||| | || ||||  |    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacg 41423765  T
Q  360 ggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtatt 411  Q
    ||||  | |||||||| ||||||||||||||||  |||| ||| ||||||||    
T  41423764 ggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtatt 41423713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 348 - 419
Target Start/End: Original strand, 46374808 - 46374879
Alignment:
Q  348 tgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| ||||| ||| | |||||| |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccaccta 46374879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 39255903 - 39256000
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||||||||| |||| |||||||  ||||||||  | || ||| ||||||||||||||||||| ||||| | ||| ||||||||||||||||    
T  39255903 agagagaagaggagatgaaagagaaagtgttcttgtgtggagtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccaccta 39256000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 40846028 - 40846190
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgt 356  Q
    |||||||||||||||||||| | | |||| |   |||||| | |||||| |||||   ||||  ||||||||||| ||| | |||| ||||||| |||||    
T  40846028 aaaggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgtatttgt 40846127  T
Q  357 gtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    | ||| | ||| | || || ||| |||||||||||||| ||| ||||||||||||||||||||    
T  40846128 gcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccaccta 40846190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 26449659 - 26449531
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgaggatttgtgctcaaaatggtacttccaaagccgc 112  Q
    ||||||||||| ||||||| |||||||||| |||||||| | |||| || | ||||||||||||||||| | |||  ||||| ||||| |||||| | ||    
T  26449659 cagagagaaagcagaagaagcaggtgaacagagtgaagcctactagcttcagctcagccggaatgaggactcgtgtccaaaagggtacctccaaaactgc 26449560  T
Q  113 cttgatagatgcagaatagttggttcaat 141  Q
    || || | || |  |||||||||||||||    
T  26449559 ctcgacatataccaaatagttggttcaat 26449531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 419
Target Start/End: Complemental strand, 36362129 - 36362049
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    |||| |||||||| ||||||||| | || ||||| ||||||||||||||||||||||||| || || |||||| |||||||    
T  36362129 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccaccta 36362049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 46374741 - 46374800
Alignment:
Q  259 aggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattag 318  Q
    |||||||||||||||||||| | |||||||| |||||| | |||||||| ||||||||||    
T  46374741 aggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattag 46374800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 7728086 - 7727929
Alignment:
Q  262 aaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtggg 361  Q
    ||||||||||||||||| | |||| |   |||||  | |||||||| |||| |||||  ||||||||||| ||| | || | |||||||  ||||| |||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  362 attcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     | ||| ||||||| |||||||||||| ||||  ||| ||| |||||||| |||||||    
T  7727986 gtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccaccta 7727929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 16099673 - 16099785
Alignment:
Q  125 agaatagttggttcaattgcaacagaaatct-gagaataccaatacttttgttgaaattttcttagagagagtagtctttttagtctttatttagccaag 223  Q
    |||||||||||||||||||||||| |||| | | |||||| |||| ||||||| |||| |||||  ||||||| ||| |||||||| || ||| || |||    
T  16099673 agaatagttggttcaattgcaaca-aaatatagggaatacaaatatttttgttcaaatattctt--agagagtggtc-ttttagtcgttgttttgctaag 16099768  T
Q  224 aatggtcatacttttga 240  Q
    || ||||||||||||||    
T  16099769 aaaggtcatacttttga 16099785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 38160556 - 38160513
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||    
T  38160556 ccacgtgtcagaattttgtgtgggtg-taaggggtgtattgccac 38160513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 396
Target Start/End: Original strand, 27744225 - 27744363
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||| ||| ||| | |||||||| ||| |  | |||||| | ||| || |||  ||||||||||||||| |  ||| ||| |||| || ||    
T  27744225 aaggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttatg 27744324  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgtgggt 396  Q
     ||||| || ||| |||| ||||||||||||||||||||    
T  27744325 agggatccacgtggccacatgtcagatttttgtgtgggt 27744363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 36208294 - 36208196
Alignment:
Q  321 agagagaagaggagatgcaagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
    ||||||||||||||| | |||| ||| |||| |||||  || | || |||||||| |||||| ||||||||||||||| || |  |||||| |||||||    
T  36208294 agagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccaccta 36208196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 398
Target Start/End: Complemental strand, 32046018 - 32045881
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    ||||||||||||||||||| |||||||   |||||| | |||||| |||||| ||| |  |||||||||| |||||| || | ||||| || | || |||    
T  32046018 gaaaatgttacatagacattctttatttacatacacccttgtacatctcatatatttgaaagagagaagatgagatgaaaaagaaagtatgctagtatgg 32045919  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgt 398  Q
    | |  || ||   ||||||||||||||| |||||||||    
T  32045918 ggtctatatggttacgtgtcagatttttatgtgggtgt 32045881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 33191275 - 33191332
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagc 70  Q
    |||||| || |||||||||||| |||| ||||||||||| | |||| |||||||||||    
T  33191275 cagagaaaatgaagaagaaacatgtgagcaaagtgaagcctgctagctttaactcagc 33191332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 32029794 - 32029751
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  32029794 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 32029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 43317566 - 43317609
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  43317566 ccacatgtcagaattttgtgtgggtg-taaggggtgtattgccac 43317609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 261 - 417
Target Start/End: Complemental strand, 152679 - 152523
Alignment:
Q  261 gaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgg 360  Q
    |||||||||||||||||| | |||| |   |||||| | |||||| | |||  |||||  ||||||||||| ||| | |||| ||||||| |||||| ||    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgg 152580  T
Q  361 gattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacc 417  Q
    ||| ||| ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  152579 gatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacc 152523  T

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Target: scaffold0237 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 415
Target Start/End: Complemental strand, 4207 - 4056
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| | |||||||| |||||| | |||||||| ||| ||||||  ||||||||||| |||   |||| |||||||| || || |||||    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgcca 415  Q
     || || || ||||||||||||||||||||||||||||  ||||||||||||    
T  4107 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgcca 4056  T

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Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 392
Target Start/End: Original strand, 8779 - 8913
Alignment:
Q  258 aaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtg 357  Q
    ||||||||||||||||||||| | ||||||| ||||||| | |||||||| |||| |||||  |||||||||| | || | |||| ||| |||  |||||    
T  8779 aaggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtg 8878  T
Q  358 tgggattcatgtgaccacgtgtcagatttttgtgt 392  Q
    |||| | || ||||| | |||||| ||||||||||    
T  8879 tggggtccacgtgactatgtgtcaaatttttgtgt 8913  T

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Target: scaffold0531 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 10256 - 10324
Alignment:
Q  13 cagagagaaagaagaagaaacaggtgaacaaagtgaagctttctagttttaactcagccggaatgagga 81  Q
    |||||| |||||||||||| || ||| ||||||||| || | |||||||||||||||||||||||||||    
T  10256 cagagaaaaagaagaagaagcacgtgcacaaagtgaggcctgctagttttaactcagccggaatgagga 10324  T

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Target: scaffold0321 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 10031 - 10186
Alignment:
Q  264 aatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggagatgcaagaaaaagtgtgtttgtgtgggat 363  Q
    |||| |||||||||| || ||||| | |||||| | ||||||||  || ||||||  |||||||||||||||   |||| |||||||| ||||  | | |    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggt 10130  T
Q  364 tcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 419  Q
     || ||||| ||||||||||||||| ||||| ||| || || ||||||||||||||    
T  10131 ccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccaccta 10186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 421
Target Start/End: Complemental strand, 17157 - 17075
Alignment:
Q  339 aagaaaaagtgtgtttgtgtgggattcatgtgaccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatg 421  Q
    |||| ||| |||| ||||| ||| | ||||||||||| |||||||||||||||||| |||  |||| |||||||| |||||||    
T  17157 aagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaacctatg 17075  T

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Target: scaffold0316; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 17288 - 17210
Alignment:
Q  257 aaaggaaaatgttacatagacatcctttattcctatacacacctgtacacctcatacattagtgagagagaagaggaga 335  Q
    |||||||||||||||||||||| |||||||| | ||||||   ||||||||| |||   |||  |||||||||||||||    
T  17288 aaaggaaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggaga 17210  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 808 - 851
Alignment:
Q  372 ccacgtgtcagatttttgtgtgggtgttaaggggtgtattgccac 416  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  808 ccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccac 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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