View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1345_low_71 (Length: 470)

Name: NF1345_low_71
Description: NF1345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1345_low_71
NF1345_low_71
[»] chr1 (5 HSPs)
chr1 (1-373)||(29443477-29443849)
chr1 (13-373)||(29453460-29453811)
chr1 (173-373)||(29423051-29423251)
chr1 (39-373)||(29467936-29468276)
chr1 (1-145)||(29422917-29423052)
[»] chr2 (39 HSPs)
chr2 (13-157)||(12012927-12013063)
chr2 (1-157)||(11987865-11988013)
chr2 (1-157)||(12019266-12019412)
chr2 (76-216)||(10371511-10371648)
chr2 (17-170)||(9315639-9315784)
chr2 (76-200)||(9284540-9284665)
chr2 (76-200)||(9294990-9295115)
chr2 (102-216)||(10347462-10347575)
chr2 (13-170)||(9320587-9320736)
chr2 (76-170)||(9328262-9328355)
chr2 (7-201)||(9364227-9364409)
chr2 (13-76)||(9291554-9291617)
chr2 (272-330)||(9061358-9061416)
chr2 (1-218)||(9065937-9066159)
chr2 (13-76)||(12006544-12006607)
chr2 (220-330)||(9291755-9291865)
chr2 (13-132)||(8573931-8574044)
chr2 (13-76)||(10352726-10352789)
chr2 (272-331)||(16268953-16269012)
chr2 (235-361)||(10335704-10335830)
chr2 (226-296)||(12019121-12019191)
chr2 (220-361)||(9315852-9315993)
chr2 (223-340)||(9364464-9364581)
chr2 (233-330)||(10371683-10371780)
chr2 (120-157)||(12006496-12006533)
chr2 (220-331)||(12012750-12012858)
chr2 (220-340)||(9284379-9284499)
chr2 (273-333)||(9320868-9320928)
chr2 (76-170)||(9061545-9061636)
chr2 (129-216)||(10335584-10335670)
chr2 (220-331)||(11987685-11987796)
chr2 (272-330)||(8573725-8573783)
chr2 (3-76)||(10335412-10335485)
chr2 (273-330)||(10347650-10347707)
chr2 (272-331)||(8579703-8579762)
chr2 (13-52)||(9328216-9328255)
chr2 (272-354)||(9065789-9065871)
chr2 (13-76)||(9274181-9274241)
chr2 (273-333)||(9328485-9328545)
[»] chr3 (1 HSPs)
chr3 (13-139)||(37462086-37462205)
[»] scaffold0667 (1 HSPs)
scaffold0667 (13-168)||(4061-4208)
[»] chr8 (2 HSPs)
chr8 (14-203)||(41967067-41967247)
chr8 (220-326)||(41966911-41967017)
[»] chr4 (1 HSPs)
chr4 (13-76)||(26574512-26574575)
[»] chr7 (2 HSPs)
chr7 (272-330)||(45230293-45230351)
chr7 (272-330)||(45243555-45243613)


Alignment Details
Target: chr1 (Bit Score: 365; Significance: 0; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Complemental strand, 29443849 - 29443477
Alignment:
Q  1 tgtcaaatacacatacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  29443849 tgtcaaatacacatacataaacaaaggtagagacttcaaaataattagagaatccttgtcctatgataagaattcagaattcaatttgaccttttaacat 29443750  T
Q  101 ggagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactcaggtaatcaataagaagtaccttctcttgct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29443749 ggagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactcaggtaatcaataagaagtaccttctcttgct 29443650  T
Q  201 tgtttgattctccttcctggggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29443649 tgtttgattctccttcctggggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacat 29443550  T
Q  301 tcactcttgagatcataccaaaacagcttctcacgatctacttgcaacagaaccatacttctatcgctcgaat 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29443549 tcactcttgagatcataccaaaacagcttctcacgatctacttgcaacagaaccatacttctatcgctcgaat 29443477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 13 - 373
Target Start/End: Complemental strand, 29453811 - 29453460
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaacta 112  Q
    ||||||||||  |||||||||||||||| ||||||||||||  |||| |||| |||||||||||       ||||   ||||||||||  |||||||||     
T  29453811 atacataaacttaggtagagacttcaaagtaattagagaatccttgttctataataagaattca-------attta--cttttaacataaagtttaactg 29453721  T
Q  113 gatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactcaggtaatcaataagaagtaccttctcttgcttgtttgattctc 212  Q
     |||||||||||||||| || |||||| ||| ||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||||| | ||||||    
T  29453720 catatatcatatgatggatctattgaactgaaattaacttatacagagcaaaaactcagataataaataaggagtaccttctcttgcttgtataattctc 29453621  T
Q  213 cttcctggggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgaga 312  Q
     ||||||||||| |||||| | |||||||||||||||||||| || || ||||| |   ||||||||||||||||| |||||||   |||||||||||||    
T  29453620 tttcctggggaaggaaggtggcacaagacttccaacacaaatcatagcttgatcgaaattaggaattccttcaacacaactaacttgttcactcttgaga 29453521  T
Q  313 tcataccaaaacagcttctcacgatctacttgcaacagaaccatacttctatcgctcgaat 373  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  29453520 tcataccaaaacagcttctcacaatctacttccaacagaaccatacttccatcgctcgaat 29453460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 173 - 373
Target Start/End: Original strand, 29423051 - 29423251
Alignment:
Q  173 taatcaataagaagtaccttctcttgcttgtttgattctccttcctggggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccct 272  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||| ||||||  ||||||||||||||||||||| ||||| ||||| |   |    
T  29423051 taatcaataagaagtaccttctcttgcttgtgcgattctccttcctagggaaggaaggtgatacaagacttccaacacaaatcatggcttgatcgaaatt 29423150  T
Q  273 aggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttctcacgatctacttgcaacagaaccatacttctatcgctcgaa 372  Q
    ||||||||||| |||| |||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||    
T  29423151 aggaattccttgaacacaactaacttgttcactcttgagatcataccaaaacagcttctcaggatctacttgcaacagaaccatacctccatcgctcgaa 29423250  T
Q  373 t 373  Q
    |    
T  29423251 t 29423251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 39 - 373
Target Start/End: Complemental strand, 29468276 - 29467936
Alignment:
Q  39 aaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaactagatatatcatat-----gatgggtcc 133  Q
    ||||||||||||||| |||||||||| |||||||||||       ||||||||||||||||  ||||||||||  |||||||||||     ||| |||||    
T  29468276 aaataattagagaatcattgtcctataataagaattca-------atttgaccttttaaca--gagtttaactgcatatatcatatcatatgataggtcc 29468186  T
Q  134 attgaat-tgatattaacttatacaaag---------aaaaaactcaggtaatcaataagaagtaccttctcttgcttgtttgattctccttcctgggga 223  Q
    ||| | | ||||||||||||||||| |          |||||||||||  ||||||||||||||||||||||||||||||  ||||||| ||||| ||||    
T  29468185 attaactgtgatattaacttatacataacaaaaactcaaaaaactcagacaatcaataagaagtaccttctcttgcttgtgcgattctcgttcctaggga 29468086  T
Q  224 aagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcataccaaaa 323  Q
    | |||||| |||||||||||||||||||||| || || | || ||   |||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  29468085 aggaaggtggtacaagacttccaacacaaatcatagcttcattcaaattaggaattccttcaacataattaacatgttcactcttgagatcataccaaaa 29467986  T
Q  324 cagcttctcacgatctacttgcaacagaaccatacttctatcgctcgaat 373  Q
    || ||||||| | |||||||  |||||||||||||||| |||||||||||    
T  29467985 caacttctcatggtctacttcaaacagaaccatacttccatcgctcgaat 29467936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 29422917 - 29423052
Alignment:
Q  1 tgtcaaatacacatacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||       ||||||||||||||||||||||||     
T  29422917 tgtcaaatacatatacataaacaaaggtagagacttcaaaataattagagaatcattgtcatataata-------agaattcaatttgaccttttaaca- 29423008  T
Q  101 ggagtttaactagatatatcatatgatgggtccattgaattgata 145  Q
     |||||||||||||||||||||||||| |||||||||||||||||    
T  29423009 -gagtttaactagatatatcatatgatcggtccattgaattgata 29423052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 12013063 - 12012927
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaacta 112  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||||||||       ||||||||||| |||||||||| ||||||    
T  12013063 atacataaacaaaggtagagacttcaaagtaattagagaatccttgtcctataataagaattca-------atttgaccttt-aacatggagtctaacta 12012972  T
Q  113 gatatatcatatgatgggtccattgaattgatattaacttataca 157  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  12012971 catatatcatatgatgggtccattgaattgatattaacttataca 12012927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11988013 - 11987865
Alignment:
Q  1 tgtcaaatacacatacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacat 100  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||||| |||  ||||||||| ||| |||||||       ||||||||||| |||||    
T  11988013 tgtcaaatatatatacataaacaaaggtagagacttcaaagtaattagaaaatccttgtcctataataggaattca-------atttgaccttt-aacat 11987922  T
Q  101 ggagtttaactagatatatcatatgatgggtccattgaattgatattaacttataca 157  Q
      |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  11987921 aaagtttaactacatatatcacatgatgggtccattgaattgatattaacttataca 11987865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 12019412 - 12019266
Alignment:
Q  1 tgtcaaatacacatacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacat 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||  ||| ||          |||||||    
T  12019412 tgtcaaatacatatacataaacaaaggtagagacttcaaagtaattagagaatccttgtcctataataagaattc-caataca----------ttaacat 12019324  T
Q  101 ggagtttaactagatatatcatatgatgggtccattgaatt-gatattaacttataca 157  Q
     ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  12019323 agagtttaactacatatatcatatgatgggtccattgaattggatgttaacttataca 12019266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 10371511 - 10371648
Alignment:
Q  76 agaattcaatttgaccttttaacatggagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactcaggtaa 175  Q
    ||||||||||||||||||| ||||  ||||||||||  |||||| ||||||||| ||||||||| ||||||||||||||||| |  |||||||||| |||    
T  10371511 agaattcaatttgaccttt-aacacagagtttaactgcatatataatatgatggatccattgaactgatattaacttatacacaacaaaaactcagttaa 10371609  T
Q  176 tcaataagaagtaccttctcttgcttgtttgattctccttc 216  Q
      || || |||||||||||||||||||| ||||||||||||    
T  10371610 --aacaataagtaccttctcttgcttgtatgattctccttc 10371648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 9315639 - 9315784
Alignment:
Q  17 ataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaactagata 116  Q
    ||||||||||||||||| || ||| ||||||| ||||  ||||||||| |||||||||||       ||||||||||| | ||| |||||||||||  ||    
T  9315639 ataaacaaaggtagagaatttaaagtaattagggaatccttgtcctataataagaattca-------atttgaccttt-agcatagagtttaactactta 9315730  T
Q  117 tatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactca 170  Q
    ||||||||||||||||||||||| ||| ||||||||||||| || |||||||||    
T  9315731 tatcatatgatgggtccattgaactgacattaacttatacatagcaaaaactca 9315784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 9284665 - 9284540
Alignment:
Q  76 agaattcaatttgaccttttaacatggagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaag-aaaaaactcaggta 174  Q
    ||||||||||||||||||| || ||  |||||||||| ||| || |||||||||||||||| || | | |||||||||||||||| ||||||||||| ||    
T  9284665 agaattcaatttgaccttt-aatataaagtttaactacataaattatatgatgggtccattaaactaaaattaacttatacaaagcaaaaaactcagata 9284567  T
Q  175 atcaat-aagaagtaccttctcttgct 200  Q
    |||||| ||||||||||||||||||||    
T  9284566 atcaataaagaagtaccttctcttgct 9284540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 9295115 - 9294990
Alignment:
Q  76 agaattcaatttgaccttttaacatggagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaag-aaaaaactcaggta 174  Q
    ||||||||||||||||||| | ||| ||||||||| | ||| || |||||||||||||||| || | | |||||||||||||||| ||||||||||| ||    
T  9295115 agaattcaatttgaccttt-agcatagagtttaaccacataaattatatgatgggtccattaaactaaaattaacttatacaaagcaaaaaactcagata 9295017  T
Q  175 atcaat-aagaagtaccttctcttgct 200  Q
    |||||| ||||||||||||||||||||    
T  9295016 atcaataaagaagtaccttctcttgct 9294990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 10347462 - 10347575
Alignment:
Q  102 gagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactcaggtaatcaataagaagtaccttctcttgctt 201  Q
    ||||||||||  |||||| |||||||  |||||||||| |||||| |||||||||| |  |||||||||| ||| |||||||||||||||||||||||||    
T  10347462 gagtttaactgcatatatgatatgataagtccattgaactgatat-aacttatacacaacaaaaactcagttaaacaataagaagtaccttctcttgctt 10347560  T
Q  202 gtttgattctccttc 216  Q
    |  ||||||||||||    
T  10347561 ggatgattctccttc 10347575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 9320587 - 9320736
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaacta 112  Q
    |||| ||||||||||||||||||||||| ||||||||| ||  |||||| || |||| ||||||       ||||||||| | | ||| ||||||||||     
T  9320587 atacgtaaacaaaggtagagacttcaaagtaattagagtatccttgtccgataataaaaattca-------atttgacctat-agcatagagtttaactt 9320678  T
Q  113 gatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactca 170  Q
     |||||||||||||||||||||||||||||| || |||| ||||| || |||||||||    
T  9320679 aatatatcatatgatgggtccattgaattgacatcaactaatacatagcaaaaactca 9320736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 9328262 - 9328355
Alignment:
Q  76 agaattcaatttgaccttttaacatggagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactca 170  Q
    ||||||||||||||||||| | ||| ||||||||||  ||||||||||||| |||||||||||||||| || |||||||||| || |||||||||    
T  9328262 agaattcaatttgaccttt-agcatagagtttaacttcatatatcatatgacgggtccattgaattgacatcaacttatacatagcaaaaactca 9328355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 9364227 - 9364409
Alignment:
Q  7 atacacatacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtt 106  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||| |  ||||||||| |||       ||||||| |||||||| ||||| || |||||    
T  9364227 atacatatacataaacaaaggtatagacttcaaagtaattagagactccttgtcctataata-------agaattccatttgacc-tttaatatagagtt 9364318  T
Q  107 taactagatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactcaggtaatcaataagaagtaccttctcttgctt 201  Q
    ||| || |||||||||||||||||| |||||||  |||| || |||||||| || ||| ||||||   || || || ||||||||||||||||||    
T  9364319 taagtacatatatcatatgatgggttcattgaacggata-tagcttatacacagcaaagactcag---ataaacaacaagtaccttctcttgctt 9364409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 9291554 - 9291617
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattca 76  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||||||||    
T  9291554 atacataaacaaaggtagagacttcaaagtaattagagaatccttgtcctataataagaattca 9291617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 9061416 - 9061358
Alignment:
Q  272 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttc 330  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  9061416 taggaattccttcaacataactaacttgttcactcttgagatcataccaaaacagcttc 9061358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 9066159 - 9065937
Alignment:
Q  1 tgtcaaatacacatacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacat 100  Q
    |||||||||||  |||||||||||||||||| |||||||| ||||||||||||  || ||||||||||       ||| |||||||||||| || | ||     
T  9066159 tgtcaaatacatgtacataaacaaaggtagaaacttcaaagtaattagagaatctttatcctatgata-------agacttcaatttgacc-ttgagca- 9066069  T
Q  101 ggagtttaactagatatatcatatga--------tgggtccattgaattgatattaacttatacaaagaa-------aaaactcaggtaatcaataagaa 185  Q
      |||||| ||| |||||||||||||        ||||||||||||| |||||||||||| ||||||| |       |||||| ||  ||| ||||||||    
T  9066068 -aagtttagctacatatatcatatgatgggtcattgggtccattgaactgatattaacttgtacaaagcaagaactcaaaacttagaaaataaataagaa 9065970  T
Q  186 gtaccttctcttgcttgtttgattctccttcct 218  Q
    ||||||||||||| ||||| |||||||||||||    
T  9065969 gtaccttctcttggttgttcgattctccttcct 9065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 12006607 - 12006544
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattca 76  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||||||  |||||||||||    
T  12006607 atacataaacaaaggtagagacttcaaagtaattagagaatccttgtcctaaaataagaattca 12006544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 9291755 - 9291865
Alignment:
Q  220 gggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcatacc 319  Q
    ||||| |||||| ||| ||||||| |||||||||| || || | |||||   ||||||||||||||||||||||||    ||||||||| | ||||||||    
T  9291755 gggaaggaaggtggtagaagactttcaacacaaatcatagcttcatccaaattaggaattccttcaacataactaatttgttcactcttcaaatcatacc 9291854  T
Q  320 aaaacagcttc 330  Q
    |||||||||||    
T  9291855 aaaacagcttc 9291865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 8574044 - 8573931
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaacta 112  Q
    ||||||||||||||||| | |||||||| ||||||||||||  ||||||||||  |     | |||||| ||||||||| |||| ||| ||||||||| |    
T  8574044 atacataaacaaaggtataaacttcaaagtaattagagaatccttgtcctatgtga-----taagaatttaatttgacc-tttagcatagagtttaacca 8573951  T
Q  113 gatatatcatatgatgggtc 132  Q
     |||||||||||||||||||    
T  8573950 catatatcatatgatgggtc 8573931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 10352726 - 10352789
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattca 76  Q
    ||||||||||||||||| |||| ||||| ||||||||||||  || ||||||||||||||||||    
T  10352726 atacataaacaaaggtaaagacgtcaaagtaattagagaatccttatcctatgataagaattca 10352789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 16268953 - 16269012
Alignment:
Q  272 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttct 331  Q
    ||||||||||||||||||||||||| | ||||||||| | |||||||||||||| |||||    
T  16268953 taggaattccttcaacataactaactcgttcactcttcaaatcataccaaaacaacttct 16269012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 235 - 361
Target Start/End: Original strand, 10335704 - 10335830
Alignment:
Q  235 acaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttctcac 334  Q
    |||||||||||||||||||| || |  | |||||   ||||||||||||||||||||||||    ||||||||| | |||||||||||||| ||||| ||    
T  10335704 acaagacttccaacacaaatcatagtgtcatccaaattaggaattccttcaacataactaatttgttcactcttcaaatcataccaaaacaacttcttac 10335803  T
Q  335 gatctacttgcaacagaaccatacttc 361  Q
     ||| | || ||| |||||| ||||||    
T  10335804 aatcgatttccaatagaaccttacttc 10335830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 12019191 - 12019121
Alignment:
Q  226 gaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaac 296  Q
    |||||| |||||||||||||||||||||| ||||| | ||| |   |||||||||||||||||||||||||    
T  12019191 gaaggtggtacaagacttccaacacaaatcatggcttcatcgaaattaggaattccttcaacataactaac 12019121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 361
Target Start/End: Original strand, 9315852 - 9315993
Alignment:
Q  220 gggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcatacc 319  Q
    ||||| |||||| ||||||||||| |||||||||| || || | |||||   ||| |||||||||||||||| ||||   ||||||| | |  ||| |||    
T  9315852 gggaaggaaggtggtacaagactttcaacacaaatcatagcttcatccaaattagaaattccttcaacataaataacttgttcactcatcaagtcacacc 9315951  T
Q  320 aaaacagcttctcacgatctacttgcaacagaaccatacttc 361  Q
    |||||||||||| || ||||| || ||| |||||| ||||||    
T  9315952 aaaacagcttcttacaatctatttccaatagaaccttacttc 9315993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 9364464 - 9364581
Alignment:
Q  223 aaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcataccaaa 322  Q
    ||||||||| |||||||||| ||||||||||| || || | || ||   |||||||||||  ||||  | ||||   ||||||||||||||| |||||||    
T  9364464 aaagaaggtggtacaagactaccaacacaaatcatagcttcattcatattaggaattcctggaacactagtaacgttttcactcttgagatcgtaccaaa 9364563  T
Q  323 acagcttctcacgatcta 340  Q
    ||||||||| ||||||||    
T  9364564 acagcttcttacgatcta 9364581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 330
Target Start/End: Original strand, 10371683 - 10371780
Alignment:
Q  233 gtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttc 330  Q
    |||||||||| ||||||||||  || |||| |||||   ||| | |||||||||||||||||||   ||||||||| | |||||||||||||||||||    
T  10371683 gtacaagactaccaacacaaaccatagcatcatccaaattagaatttccttcaacataactaacttgttcactcttcaaatcataccaaaacagcttc 10371780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 12006533 - 12006496
Alignment:
Q  120 catatgatgggtccattgaattgatattaacttataca 157  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12006533 catatgatgggtccattgaattgatattaacttataca 12006496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 331
Target Start/End: Complemental strand, 12012858 - 12012750
Alignment:
Q  220 gggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcatacc 319  Q
    ||||| || ||| |||||||||||||||||||||| || || | ||| |   |||||||||||||||||||||||||   || |||||| | ||||||||    
T  12012858 gggaaggagggtggtacaagacttccaacacaaatcatagcttcatcgaaattaggaattccttcaacataactaac---ttgactcttcaaatcatacc 12012762  T
Q  320 aaaacagcttct 331  Q
    ||| ||||||||    
T  12012761 aaaccagcttct 12012750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 340
Target Start/End: Complemental strand, 9284499 - 9284379
Alignment:
Q  220 gggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcatacc 319  Q
    ||||| |||||| | ||||||||| |||||||||| || || | |||||   |||||||||||||||||||| ||||    |||||||| | ||||||||    
T  9284499 gggaaggaaggtggcacaagactttcaacacaaatcatagcttcatccaaattaggaattccttcaacataaataacttgctcactcttcaaatcatacc 9284400  T
Q  320 aaaacagcttctcacgatcta 340  Q
    ||| |||||||| || |||||    
T  9284399 aaaccagcttcttacaatcta 9284379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 9320868 - 9320928
Alignment:
Q  273 aggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttctca 333  Q
    ||||||||||||||||||||||||   | ||||||| | ||||||||||||||||||||||    
T  9320868 aggaattccttcaacataactaacttgtgcactcttcaaatcataccaaaacagcttctca 9320928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 9061636 - 9061545
Alignment:
Q  76 agaattcaatttgaccttttaacatggagtttaactagatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactca 170  Q
    |||||||||||| |||||| | ||| ||||||||||| |||||| |||||||||  |||||||| ||| || |||||||||| || |||||||||    
T  9061636 agaattcaatttaaccttt-agcatagagtttaactacatatattatatgatgg--ccattgaactgacatcaacttatacatagcaaaaactca 9061545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 10335584 - 10335670
Alignment:
Q  129 ggtccattgaattgatattaacttatacaaagaaaaaactcaggtaatcaataagaagtaccttctcttgcttgtttgattctccttc 216  Q
    ||||||||||| |||||| |||||||||| |  ||||||||||  || ||||||||||||||||| |||||||||  |||||| ||||    
T  10335584 ggtccattgaactgatat-aacttatacacaacaaaaactcagtcaaacaataagaagtaccttcccttgcttgtacgattctgcttc 10335670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 331
Target Start/End: Complemental strand, 11987796 - 11987685
Alignment:
Q  220 gggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcatacc 319  Q
    ||||| || ||| |||||||||||||||||||||| || || | ||| |   |||||||||| |||||||||||||    ||||||||| | ||||||||    
T  11987796 gggaaggagggtggtacaagacttccaacacaaatcatagcttcatcgaatttaggaattccgtcaacataactaaattgttcactcttcaaatcatacc 11987697  T
Q  320 aaaacagcttct 331  Q
    ||| ||||||||    
T  11987696 aaaccagcttct 11987685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 8573783 - 8573725
Alignment:
Q  272 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttc 330  Q
    |||||||||||||||||||||| ||   ||||||||| | |||||||||||||||||||    
T  8573783 taggaattccttcaacataactgacttgttcactcttcaaatcataccaaaacagcttc 8573725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 10335412 - 10335485
Alignment:
Q  3 tcaaatacacatacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattca 76  Q
    ||||||||| |||||||||||||||||  |||| || | ||||||||||||  |  ||||||||||||||||||    
T  10335412 tcaaatacatatacataaacaaaggtaacgactccagagtaattagagaatcctcatcctatgataagaattca 10335485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 10347650 - 10347707
Alignment:
Q  273 aggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttc 330  Q
    |||||||||||||||||||||||    ||||||||| | |||||||||||||||||||    
T  10347650 aggaattccttcaacataactaatttgttcactcttcaaatcataccaaaacagcttc 10347707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 331
Target Start/End: Complemental strand, 8579762 - 8579703
Alignment:
Q  272 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttct 331  Q
    |||||||||||| |||| || ||||   |||||| |||||||||||||||||||||||||    
T  8579762 taggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttct 8579703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 9328216 - 9328255
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaa 52  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  9328216 atacgtaaacaaaggtagagacttcaaagtaattagagaa 9328255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 9065871 - 9065789
Alignment:
Q  272 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttctcacgatctacttgcaacagaacc 354  Q
    |||||| ||||||||||||| ||||   ||||||||| | |||||||||||| ||||||| | ||||||| | ||||| ||||    
T  9065871 taggaactccttcaacataaataacttgttcactcttcaaatcataccaaaagagcttctgatgatctacctccaacaaaacc 9065789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 9274181 - 9274241
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattca 76  Q
    |||||||||||||||||||   |||||| ||||||| ||||  ||||||||| |||||||||||    
T  9274181 atacataaacaaaggtaga---ttcaaagtaattagtgaatccttgtcctataataagaattca 9274241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 9328485 - 9328545
Alignment:
Q  273 aggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttctca 333  Q
    ||||||||||||||||||||||||   | ||||| | | ||||||| ||||||||||||||    
T  9328485 aggaattccttcaacataactaacttgtgcactcctaaaatcatacaaaaacagcttctca 9328545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 37462086 - 37462205
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaacta 112  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||||||| | |       ||||||||||||||||||||| ||| ||  |||||||    
T  37462086 atacataaacaaaggtagagacttcaaagtaattagagaatccttgtcctataaca-------agaattcaatttgaccttttagcatagaacttaacta 37462178  T
Q  113 gatatatcatatgatgggtccattgaa 139  Q
     ||||||||||||||||||||| ||||    
T  37462179 catatatcatatgatgggtccaatgaa 37462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 4061 - 4208
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaacta 112  Q
    ||||||||||||||||||||| |||||| |||||| |||||  || |||||| |||||||||||       ||||||  ||||| ||  |||||||||||    
T  4061 atacataaacaaaggtagagaattcaaagtaattatagaatccttttcctataataagaattca-------atttgag-ttttagcacagagtttaacta 4152  T
Q  113 gatatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaact 168  Q
     ||| ||||||||||||||||||||||  |||||||||||||||| || |||||||    
T  4153 aataaatcatatgatgggtccattgaacagatattaacttatacacagcaaaaact 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 41967247 - 41967067
Alignment:
Q  14 tacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattcagaattcaatttgaccttttaacatggagtttaactag 113  Q
    |||||||||||||||| || |||| || ||||||||||||| || |||||| |||||||||||       |||| |||||| ||||| |||||||| ||     
T  41967247 tacataaacaaaggtaaagccttcgaagtaattagagaatagttatcctataataagaattca-------atttaaccttt-aacatagagtttaagtac 41967156  T
Q  114 atatatcatatgatgggtccattgaattgatattaacttatacaaagaaaaaactcaggtaatcaataagaagtaccttctcttgcttgt 203  Q
    || |||  |||||||||||||||| | | || | ||| ||||||||| |||| || || |||| || |||||||||||||||||||||||    
T  41967155 atgtattgtatgatgggtccattgcactaatct-aacatatacaaagcaaaagctaagataatgaacaagaagtaccttctcttgcttgt 41967067  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 41967017 - 41966911
Alignment:
Q  220 gggaaagaaggttgtacaagacttccaacacaaatgatggcatgatccaccctaggaattccttcaacataactaacacattcactcttgagatcatacc 319  Q
    ||||| |||||| |||||||||||||||||||||  ||||| | ||| |   |||||||||||||||||||| |||    ||||||||| | ||||||||    
T  41967017 gggaaggaaggtggtacaagacttccaacacaaaacatggcttcatcaaaattaggaattccttcaacataagtaatttgttcactcttcaaatcatacc 41966918  T
Q  320 aaaacag 326  Q
    |||||||    
T  41966917 aaaacag 41966911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 26574512 - 26574575
Alignment:
Q  13 atacataaacaaaggtagagacttcaaaataattagagaataattgtcctatgataagaattca 76  Q
    |||||||||||| |||| |||| ||||| ||||||||||||  || ||||||||||||||||||    
T  26574512 atacataaacaacggtaaagacgtcaaagtaattagagaatccttatcctatgataagaattca 26574575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 45230293 - 45230351
Alignment:
Q  272 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttc 330  Q
    |||||||||||| ||||| | ||||   ||||||||||| |||||||||||||||||||    
T  45230293 taggaattccttgaacatgagtaacttgttcactcttgaaatcataccaaaacagcttc 45230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 45243555 - 45243613
Alignment:
Q  272 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttc 330  Q
    |||||||||||| ||||||| |||    |||||| ||||||||||||||||||||||||    
T  45243555 taggaattccttgaacataagtaagttgttcactgttgagatcataccaaaacagcttc 45243613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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