View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13460_high_9 (Length: 284)
Name: NF13460_high_9
Description: NF13460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13460_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 32703730 - 32703991
Alignment:
| Q |
1 |
aaatgataaatgaagaatatgttacaagacatttttgtgtgtggaaaattcatattaaaa-tttacacactagtgcaagacaagtgaactcacgttaaag |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
32703730 |
aaatgataaatgaagaatatgttacaagacatttttgtgtgtggaaaattcatattaaaagtttacacactagtgcaagacaagtgaactcacgttaaag |
32703829 |
T |
|
| Q |
100 |
aaccagtggtaataaaggaactcaggaatctagttacaaagatgcgtgctccaagttctttccaagaaggtaccatgtgtttagggttggtcttaagggt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32703830 |
aaccagtggtaataaaggaactcaggaatctagttacaaagatgcgtgctccaagttctttccaagaaggtaccatgtgtttagggttggtcttaagggt |
32703929 |
T |
|
| Q |
200 |
acaacactctccaagaattccatgagctgcagtcatgccagcctgaaagttcagtcttacac |
261 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32703930 |
acaacagtctccaagaattccatgagctgcagtcatgccagcctgaaagttcagtcttacac |
32703991 |
T |
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