View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13460_low_2 (Length: 490)

Name: NF13460_low_2
Description: NF13460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13460_low_2
NF13460_low_2
[»] chr3 (24 HSPs)
chr3 (22-472)||(27782718-27783168)
chr3 (32-79)||(4155377-4155424)
chr3 (26-86)||(16239636-16239697)
chr3 (36-79)||(1723064-1723107)
chr3 (36-79)||(54567945-54567988)
chr3 (32-130)||(16926933-16927036)
chr3 (38-79)||(20327839-20327880)
chr3 (42-86)||(27086635-27086680)
chr3 (26-86)||(33640090-33640151)
chr3 (38-130)||(35038418-35038515)
chr3 (36-79)||(11589838-11589881)
chr3 (33-128)||(17001406-17001506)
chr3 (36-79)||(17638287-17638330)
chr3 (36-79)||(21833401-21833444)
chr3 (37-128)||(22729099-22729195)
chr3 (36-79)||(54368569-54368612)
chr3 (101-130)||(16239588-16239617)
chr3 (99-128)||(39269330-39269359)
chr3 (99-127)||(472116-472144)
chr3 (31-86)||(1800070-1800126)
chr3 (39-79)||(12930119-12930159)
chr3 (32-76)||(40765920-40765964)
chr3 (31-79)||(45138954-45139002)
chr3 (47-79)||(50083079-50083111)
[»] chr5 (21 HSPs)
chr5 (36-128)||(2063722-2063818)
chr5 (36-128)||(24528539-24528636)
chr5 (26-130)||(41666971-41667080)
chr5 (36-79)||(8081101-8081144)
chr5 (40-87)||(13296717-13296764)
chr5 (97-130)||(2061992-2062025)
chr5 (36-128)||(15480321-15480418)
chr5 (36-79)||(9368648-9368691)
chr5 (36-79)||(18333687-18333730)
chr5 (99-130)||(19705900-19705931)
chr5 (36-79)||(24531652-24531695)
chr5 (99-130)||(41666813-41666844)
chr5 (99-129)||(6413482-6413512)
chr5 (99-129)||(17352491-17352521)
chr5 (99-129)||(24531597-24531627)
chr5 (36-73)||(95489-95526)
chr5 (31-87)||(1564550-1564607)
chr5 (36-77)||(17016385-17016426)
chr5 (26-79)||(24346715-24346768)
chr5 (99-128)||(37782106-37782135)
chr5 (99-127)||(30770321-30770349)
[»] chr8 (29 HSPs)
chr8 (36-129)||(41790657-41790754)
chr8 (36-86)||(10884110-10884160)
chr8 (36-130)||(24532409-24532508)
chr8 (36-130)||(11232182-11232281)
chr8 (36-128)||(12317045-12317142)
chr8 (36-128)||(11232417-11232514)
chr8 (36-86)||(20301306-20301357)
chr8 (36-86)||(21087938-21087989)
chr8 (36-130)||(19256808-19256907)
chr8 (99-130)||(5932005-5932036)
chr8 (46-129)||(12688305-12688393)
chr8 (99-130)||(15042726-15042757)
chr8 (36-79)||(31197668-31197710)
chr8 (99-130)||(35682837-35682868)
chr8 (36-86)||(37001271-37001322)
chr8 (99-130)||(38447483-38447514)
chr8 (99-130)||(39052593-39052624)
chr8 (99-130)||(39052985-39053016)
chr8 (37-79)||(28213093-28213135)
chr8 (99-128)||(7669640-7669669)
chr8 (99-164)||(7729907-7729969)
chr8 (36-77)||(8084182-8084223)
chr8 (26-86)||(38476083-38476144)
chr8 (100-129)||(42584672-42584701)
chr8 (99-127)||(20301261-20301289)
chr8 (99-127)||(20301501-20301529)
chr8 (99-127)||(21087893-21087921)
chr8 (99-127)||(21088133-21088161)
chr8 (39-75)||(31079566-31079602)
[»] chr7 (30 HSPs)
chr7 (33-130)||(48243422-48243524)
chr7 (36-129)||(25620134-25620232)
chr7 (36-130)||(29469602-29469701)
chr7 (47-130)||(6634852-6634940)
chr7 (36-79)||(10882227-10882270)
chr7 (36-86)||(33996299-33996350)
chr7 (36-79)||(40121912-40121955)
chr7 (32-78)||(4886383-4886429)
chr7 (36-85)||(21821852-21821902)
chr7 (36-130)||(21861291-21861390)
chr7 (36-128)||(31257255-31257352)
chr7 (36-79)||(3038072-3038115)
chr7 (99-130)||(21861526-21861557)
chr7 (99-130)||(29469837-29469868)
chr7 (99-130)||(31485480-31485511)
chr7 (36-79)||(33834244-33834287)
chr7 (47-130)||(34027624-34027712)
chr7 (99-130)||(36277282-36277313)
chr7 (99-130)||(43688215-43688246)
chr7 (26-128)||(26239894-26240001)
chr7 (99-128)||(2404230-2404259)
chr7 (99-128)||(3520096-3520125)
chr7 (99-128)||(4454775-4454804)
chr7 (31-87)||(5871795-5871852)
chr7 (97-130)||(26562127-26562160)
chr7 (46-79)||(36993072-36993105)
chr7 (99-128)||(48243117-48243146)
chr7 (47-79)||(7786253-7786285)
chr7 (99-127)||(35308202-35308230)
chr7 (36-76)||(36993296-36993336)
[»] chr1 (32 HSPs)
chr1 (36-123)||(4098391-4098482)
chr1 (36-127)||(38668125-38668221)
chr1 (36-79)||(25145708-25145751)
chr1 (36-79)||(29266006-29266049)
chr1 (36-79)||(35772082-35772125)
chr1 (40-130)||(4112998-4113093)
chr1 (35-128)||(3169765-3169863)
chr1 (26-79)||(39348331-39348383)
chr1 (36-87)||(30369879-30369931)
chr1 (46-130)||(35772261-35772350)
chr1 (99-130)||(2859448-2859479)
chr1 (32-79)||(8870894-8870941)
chr1 (99-130)||(15986389-15986420)
chr1 (36-79)||(33156786-33156829)
chr1 (36-79)||(51589859-51589902)
chr1 (37-79)||(2120130-2120172)
chr1 (97-127)||(16163167-16163197)
chr1 (36-130)||(17452816-17452915)
chr1 (33-79)||(35892344-35892390)
chr1 (99-129)||(40079150-40079180)
chr1 (31-87)||(11524826-11524883)
chr1 (99-128)||(20208582-20208611)
chr1 (103-164)||(21626399-21626457)
chr1 (99-128)||(25713392-25713421)
chr1 (99-128)||(26173280-26173309)
chr1 (46-79)||(33157274-33157307)
chr1 (99-127)||(8870745-8870773)
chr1 (31-86)||(11525042-11525098)
chr1 (100-128)||(26173513-26173541)
chr1 (99-127)||(38668360-38668388)
chr1 (32-76)||(38733207-38733251)
chr1 (36-87)||(51460430-51460482)
[»] chr6 (21 HSPs)
chr6 (26-130)||(9705017-9705126)
chr6 (26-79)||(4868791-4868844)
chr6 (31-80)||(8001533-8001582)
chr6 (36-130)||(13353198-13353297)
chr6 (36-130)||(33796323-33796422)
chr6 (35-79)||(20373623-20373667)
chr6 (99-130)||(4868633-4868664)
chr6 (36-79)||(8026442-8026485)
chr6 (36-86)||(12330167-12330218)
chr6 (36-86)||(27653262-27653313)
chr6 (36-79)||(30256631-30256674)
chr6 (36-79)||(30256865-30256908)
chr6 (99-130)||(31961175-31961206)
chr6 (37-79)||(3680065-3680107)
chr6 (37-86)||(15082133-15082183)
chr6 (47-129)||(16570157-16570244)
chr6 (37-79)||(33494592-33494634)
chr6 (99-128)||(3680245-3680274)
chr6 (99-128)||(6542999-6543028)
chr6 (33-92)||(10145735-10145795)
chr6 (43-86)||(11085626-11085670)
[»] chr2 (27 HSPs)
chr2 (36-130)||(27036403-27036499)
chr2 (36-79)||(5509132-5509175)
chr2 (26-130)||(5711653-5711762)
chr2 (32-79)||(15124767-15124814)
chr2 (36-86)||(28407781-28407832)
chr2 (36-79)||(40379432-40379475)
chr2 (37-79)||(93616-93658)
chr2 (31-88)||(33381174-33381232)
chr2 (36-130)||(14466398-14466497)
chr2 (26-86)||(21383648-21383709)
chr2 (35-79)||(10571023-10571067)
chr2 (36-79)||(93342-93385)
chr2 (36-79)||(2029822-2029865)
chr2 (99-130)||(5711495-5711526)
chr2 (46-129)||(14927100-14927188)
chr2 (36-79)||(16419320-16419363)
chr2 (99-130)||(16533544-16533575)
chr2 (99-130)||(17719397-17719428)
chr2 (32-79)||(21591835-21591882)
chr2 (32-79)||(27897590-27897637)
chr2 (31-92)||(5206737-5206799)
chr2 (99-129)||(37812554-37812584)
chr2 (99-128)||(16419501-16419530)
chr2 (99-128)||(17525394-17525423)
chr2 (36-127)||(32356386-32356481)
chr2 (102-130)||(93182-93210)
chr2 (36-76)||(40149224-40149264)
[»] chr4 (34 HSPs)
chr4 (32-79)||(12869247-12869294)
chr4 (33-79)||(17111616-17111662)
chr4 (31-129)||(52559565-52559668)
chr4 (36-78)||(52827413-52827455)
chr4 (26-79)||(35788712-35788765)
chr4 (36-79)||(22231296-22231339)
chr4 (36-79)||(40716609-40716652)
chr4 (36-79)||(40717429-40717472)
chr4 (99-173)||(44118915-44118986)
chr4 (31-79)||(24513343-24513391)
chr4 (32-87)||(35819112-35819168)
chr4 (36-79)||(1518217-1518260)
chr4 (99-130)||(9279224-9279255)
chr4 (36-86)||(9685443-9685494)
chr4 (99-130)||(11036802-11036833)
chr4 (36-79)||(14783175-14783218)
chr4 (99-130)||(22863471-22863502)
chr4 (36-79)||(25052905-25052948)
chr4 (99-130)||(27634137-27634168)
chr4 (99-130)||(28245582-28245613)
chr4 (99-130)||(31254463-31254494)
chr4 (36-79)||(35609699-35609742)
chr4 (99-130)||(35788656-35788687)
chr4 (99-130)||(35788891-35788922)
chr4 (99-130)||(39902619-39902650)
chr4 (36-79)||(50543318-50543361)
chr4 (36-86)||(50543555-50543606)
chr4 (36-79)||(53828511-53828554)
chr4 (99-128)||(35645821-35645850)
chr4 (47-79)||(7926611-7926643)
chr4 (36-87)||(21750265-21750317)
chr4 (39-79)||(23209894-23209934)
chr4 (99-127)||(28246141-28246169)
chr4 (99-127)||(35796798-35796826)
[»] scaffold0048 (1 HSPs)
scaffold0048 (36-130)||(81839-81938)
[»] scaffold0692 (2 HSPs)
scaffold0692 (36-128)||(5742-5839)
scaffold0692 (99-127)||(5600-5628)
[»] scaffold0519 (2 HSPs)
scaffold0519 (36-128)||(1915-2012)
scaffold0519 (99-130)||(2148-2179)
[»] scaffold0083 (1 HSPs)
scaffold0083 (38-127)||(51236-51330)
[»] scaffold0481 (1 HSPs)
scaffold0481 (36-79)||(3459-3502)
[»] scaffold0129 (1 HSPs)
scaffold0129 (36-79)||(14356-14399)
[»] scaffold0092 (1 HSPs)
scaffold0092 (36-79)||(5708-5751)
[»] scaffold0005 (2 HSPs)
scaffold0005 (36-79)||(56512-56555)
scaffold0005 (47-86)||(288656-288696)
[»] scaffold0766 (1 HSPs)
scaffold0766 (99-128)||(6273-6302)
[»] scaffold0001 (1 HSPs)
scaffold0001 (102-130)||(429870-429898)


Alignment Details
Target: chr3 (Bit Score: 361; Significance: 0; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 22 - 472
Target Start/End: Complemental strand, 27783168 - 27782718
Alignment:
Q  22 actattggtggagactctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttacttaataaagattgcccccacttataaacaca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27783168 actattggtggagactctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttacttaatgaagattgcccccacttataaacaca 27783069  T
Q  122 ttgtcaggcgggccatctcttatatgatgtggactctttaacatgtttttctcagtacaccctatcacacgtgcgtgaacatattatgtttttatatagt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27783068 ttgtcaggcgggccatctcttatatgatgtggactctttaacatgtttttctcagtacaccctatcacacgtgcgtgaacatattatgtttttatatcgt 27782969  T
Q  222 gacattttttataaactcttatcaggcattgtttaaccttgcaacttgtttggccctaagctttataatctcatttgcaaatgacagnnnnnnnnnnnnn 321  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||                 
T  27782968 gacatttcttataaactcttatcaggcattgtttaaccttgcaacttgtttggccctaagctttataatctcatttgcaaatgaaagaaaataaaaatta 27782869  T
Q  322 nnnnnnnnnttaagggacaatgaccttgaaaagaagttccttgtatgttgctcttttaatttttcatattctcgcataaacaatgaccttgaaacaaaga 421  Q
             ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27782868 aaacaaaaattaagggacaatgaccttgaaaagaagttccctgtatgttgctcttttaatttttcatattctcgcataaacaatgaccttgaaacaaaga 27782769  T
Q  422 aatttccttgctacttaattctgtgcatctgcttcattgctttggtttgca 472  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27782768 aattcccttgctacttaattctgtgcatctgcttcattgctttggtttgca 27782718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 4155424 - 4155377
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  4155424 gagactctgataccatcttagaaatcgtggttgggcctaacacaaccc 4155377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 16239697 - 16239636
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 86  Q
    |||| |||| |||||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  16239697 ttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaac 16239636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 1723064 - 1723107
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  1723064 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 1723107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 54567988 - 54567945
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  54567988 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 54567945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 16926933 - 16927036
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtc 126  Q
    |||||||||||||||||||||||||| || ||| || |||||||| ||||||||||   |||     || | |||| |||||||||||||||||||||||    
T  16926933 gagactctgataccatcttagaaatcgtggttgagcttaacacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaacacattgtc 16927032  T
Q  127 aggc 130  Q
    ||||    
T  16927033 aggc 16927036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 20327839 - 20327880
Alignment:
Q  38 ctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  20327839 ctgataccatattagaaatcatggttgggcctaacacaaccc 20327880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 27086680 - 27086635
Alignment:
Q  42 taccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 86  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  27086680 taccatcttagaaatcatggttgggcctaacacaactccacaaaac 27086635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 33640151 - 33640090
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 86  Q
    |||| |||| |||||||| ||||||||||||  |||||||||||||||||| ||||||||||    
T  33640151 ttggaggaggctctgatatcatcttagaaattgtgattgggcctaacacaatcccacaaaac 33640090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 35038418 - 35038515
Alignment:
Q  38 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaata----aagattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||| || || |||||||||||||||||| |||||||   |||   |    | ||||||||||||||||||||||||||||||||    
T  35038418 ctgataccatcttagaagtcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaacacattgtcaggc 35038515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 11589881 - 11589838
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  11589881 ctctgataccatattagaaatcgtggttgggcctaacacaaccc 11589838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 17001406 - 17001506
Alignment:
Q  33 agactctgataccatcttagaaatcatgattgggcctaacac-aacccacaaaa----cttacttaataaagattgcccccacttataaacacattgtca 127  Q
    ||||||||||||||| |||||||||||| |||| |||||||| | |||||||||    ||||     | | |||||||||||||||||||||||||||||    
T  17001406 agactctgataccattttagaaatcatggttggacctaacactaccccacaaaatcgccttatgaggtgatgattgcccccacttataaacacattgtca 17001505  T
Q  128 g 128  Q
    |    
T  17001506 g 17001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 17638330 - 17638287
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| ||||||||||||||||| || ||||||||||||||||||    
T  17638330 ctcttataccatcttagaaatcgtggttgggcctaacacaaccc 17638287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 21833444 - 21833401
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  21833444 ctctgataccatgttagaaatcgtggttgggcctaacacaaccc 21833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 22729195 - 22729099
Alignment:
Q  37 tctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||  || ||||||||||||||||| ||||||||   |||    | | | |||||||||||||| |||||||||||||||    
T  22729195 tctgataccatcttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacattgtcag 22729099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 54368612 - 54368569
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||| ||||||||||||    
T  54368612 ctctgataccatcttagaaatcgtggttgggtctaacacaaccc 54368569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 130
Target Start/End: Complemental strand, 16239617 - 16239588
Alignment:
Q  101 ttgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||    
T  16239617 ttgcccccacttataaacacattgtcaggc 16239588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 39269359 - 39269330
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  39269359 gattgcccccacttataaacacattgtcag 39269330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 472116 - 472144
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  472116 gattgcccccacttataaacacattgtca 472144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 1800126 - 1800070
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 86  Q
    |||| |||||||||||||||||||||  || |||||||||| |||||| ||||||||    
T  1800126 ggaggctctgataccatcttagaaattgtggttgggcctaatacaaccgcacaaaac 1800070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 12930119 - 12930159
Alignment:
Q  39 tgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||  || ||||||||||||||||||    
T  12930119 tgataccatcttagaaatggtggttgggcctaacacaaccc 12930159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 40765920 - 40765964
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaa 76  Q
    |||||||||||||||||||| |||| ||| ||| |||||||||||    
T  40765920 gagactctgataccatcttaaaaattatgtttgagcctaacacaa 40765964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 45138954 - 45139002
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| |||||||||||||||||||||| || ||||| || |||||||||    
T  45138954 ggaggctctgataccatcttagaaatcgtggttgggtcttacacaaccc 45139002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 50083079 - 50083111
Alignment:
Q  47 tcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||| ||||||||||||||||||    
T  50083079 tcttagaaatcatggttgggcctaacacaaccc 50083111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 2063722 - 2063818
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt---aataaagattgcccccacttataaacacattgtcag 128  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||  ||||   | | | ||||||||||||||||||||||||||||||    
T  2063722 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgagtgaggattgcccccacttataaacacattgtcag 2063818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 24528636 - 24528539
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||    
T  24528636 ctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 24528539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 41666971 - 41667080
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacac 120  Q
    |||| |||| |||||||||||||||||||||| || ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||    
T  41666971 ttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacac 41667070  T
Q  121 attgtcaggc 130  Q
    ||||||||||    
T  41667071 attgtcaggc 41667080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 8081101 - 8081144
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  8081101 ctctgataccatcttagaaatcatggttgggcctaacacaaccc 8081144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 13296764 - 13296717
Alignment:
Q  40 gataccatcttagaaatcatgattgggcctaacacaacccacaaaact 87  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  13296764 gataccatcttagaaatcgtggttgggcctaacacaacccacaaaact 13296717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 2061992 - 2062025
Alignment:
Q  97 aagattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||||    
T  2061992 aagattgcccccacttataaacacattgtcaggc 2062025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 15480418 - 15480321
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 128  Q
    |||||||||||||||||||||| || |||||||||||| || ||||||||||   |||      | | ||||||||||||||||||||||||||||||    
T  15480418 ctctgataccatcttagaaatcgtggttgggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacattgtcag 15480321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 9368691 - 9368648
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||    
T  9368691 ctctgataccaccttagaaattatggttgggcctaacacaaccc 9368648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 18333687 - 18333730
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||| || || ||||||||||||||||||    
T  18333687 ctctgataccatcttagaattcgtggttgggcctaacacaaccc 18333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 19705931 - 19705900
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  19705931 gattgcccccacttataaacacattgtcaggc 19705900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 24531695 - 24531652
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || |||||| |||||||||||    
T  24531695 ctctgataccatcttagaaatcgtggttgggcataacacaaccc 24531652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 41666813 - 41666844
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  41666813 gattgcccccacttataaacacattgtcaggc 41666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 129
Target Start/End: Original strand, 6413482 - 6413512
Alignment:
Q  99 gattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||||||||||||||||||||    
T  6413482 gattgcccccacttataaacacattgtcagg 6413512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 129
Target Start/End: Original strand, 17352491 - 17352521
Alignment:
Q  99 gattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||||||||||||||||||||    
T  17352491 gattgcccccacttataaacacattgtcagg 17352521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 129
Target Start/End: Complemental strand, 24531627 - 24531597
Alignment:
Q  99 gattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||||||||||||||||||||    
T  24531627 gattgcccccacttataaacacattgtcagg 24531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 95489 - 95526
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaaca 73  Q
    |||||||||||||||||||||| || ||||||||||||    
T  95489 ctctgataccatcttagaaatcgtggttgggcctaaca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 1564550 - 1564607
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaact 87  Q
    |||| |||||||| ||||||||||||| || ||| ||||||||||| |||||||||||    
T  1564550 ggaggctctgatatcatcttagaaatcgtggttgagcctaacacaaccccacaaaact 1564607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 17016385 - 17016426
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaac 77  Q
    |||||||||||| ||||||||| || ||||||||||||||||    
T  17016385 ctctgataccatgttagaaatcgtggttgggcctaacacaac 17016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 24346715 - 24346768
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| |||| |||||||||||||||| ||||| || ||||| ||||||||||||    
T  24346715 ttggaggaggctctgataccatcttaaaaatcgtggttgggtctaacacaaccc 24346768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 37782106 - 37782135
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  37782106 gattgcccccacttataaacacattgtcag 37782135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 30770321 - 30770349
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  30770321 gattgcccccacttataaacacattgtca 30770349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 41790754 - 41790657
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttactta----ataaagattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||   ||||     | | ||||| |||||||||||||||||||||||||    
T  41790754 ctctgataccatcttagaaatcgtggttgggcctaacacaacccacaaaaccggcttatgaggtgaggattgtccccacttataaacacattgtcagg 41790657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 10884160 - 10884110
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacccacaaaac 86  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  10884160 ctctgataccatcttagaaatcgtggttgggcctaacacaacccacaaaac 10884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 24532409 - 24532508
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||||    
T  24532409 ctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcaggc 24532508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 11232182 - 11232281
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | ||||||||||||||||||||||||||||||||    
T  11232182 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 11232281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 12317142 - 12317045
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaa----cttacttaataaagattgcccccacttataaacacattgtcag 128  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||    ||||     | | ||||||||||||||||||||||||||||||    
T  12317142 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgcccccacttataaacacattgtcag 12317045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 11232417 - 11232514
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcag 128  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | ||||||||||||||||||||||||||||||    
T  11232417 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 11232514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 20301357 - 20301306
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 86  Q
    |||||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  20301357 ctctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaac 20301306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 21087989 - 21087938
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 86  Q
    |||||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  21087989 ctctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaac 21087938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 19256808 - 19256907
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||| ||||||||| || ||||||||||||||| |||||||||| | |||      | | ||||||||||||||||||||| ||||||||||    
T  19256808 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaattgtcaggc 19256907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 5932005 - 5932036
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  5932005 gattgcccccacttataaacacattgtcaggc 5932036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 12688393 - 12688305
Alignment:
Q  46 atcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaa----taaagattgcccccacttataaacacattgtcagg 129  Q
    ||||||||||||||| |||| |||| |||||||| ||||||||  |||      ||| |||||||||||||||||||||||||||||||    
T  12688393 atcttagaaatcatggttggacctatcacaaccccacaaaactggcttgtgaggtaaggattgcccccacttataaacacattgtcagg 12688305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 15042726 - 15042757
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  15042726 gattgcccccacttataaacacattgtcaggc 15042757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 31197710 - 31197668
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  31197710 ctctgataccatcttagaaatc-tggttgggcctaacacaaccc 31197668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 35682837 - 35682868
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  35682837 gattgcccccacttataaacacattgtcaggc 35682868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 37001322 - 37001271
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 86  Q
    ||||||||||||||| |||||| || |||||||||||||||| |||||||||    
T  37001322 ctctgataccatctttgaaatcgtggttgggcctaacacaactccacaaaac 37001271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 38447483 - 38447514
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  38447483 gattgcccccacttataaacacattgtcaggc 38447514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 39052593 - 39052624
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  39052593 gattgcccccacttataaacacattgtcaggc 39052624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 39052985 - 39053016
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  39052985 gattgcccccacttataaacacattgtcaggc 39053016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 28213093 - 28213135
Alignment:
Q  37 tctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||| ||||||||| || ||||||||||||||||||    
T  28213093 tctgataccatattagaaatcgtggttgggcctaacacaaccc 28213135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 7669669 - 7669640
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  7669669 gattgcccccacttataaacacattgtcag 7669640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 7729969 - 7729907
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggcgggccatctcttatatgatgt-ggactctttaaca 164  Q
    |||||||||||||||||||||||| ||||    ||||||||| ||| |||||| |||||||||||||    
T  7729969 gattgcccccacttataaacacatggtca----ggccatctcatatctgatgtgggactctttaaca 7729907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 8084223 - 8084182
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaac 77  Q
    |||||||||||||||||||||| || ||||| ||||||||||    
T  8084223 ctctgataccatcttagaaatcgtggttgggtctaacacaac 8084182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 38476144 - 38476083
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 86  Q
    |||| |||| |||||||||||||||||||||  || |||||||||||| || ||||||||||    
T  38476144 ttggaggaggctctgataccatcttagaaattgtggttgggcctaacataatcccacaaaac 38476083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 129
Target Start/End: Complemental strand, 42584701 - 42584672
Alignment:
Q  100 attgcccccacttataaacacattgtcagg 129  Q
    ||||||||||||||||||||||||||||||    
T  42584701 attgcccccacttataaacacattgtcagg 42584672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 20301289 - 20301261
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  20301289 gattgcccccacttataaacacattgtca 20301261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 20301529 - 20301501
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  20301529 gattgcccccacttataaacacattgtca 20301501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 21087921 - 21087893
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  21087921 gattgcccccacttataaacacattgtca 21087893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 21088161 - 21088133
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  21088161 gattgcccccacttataaacacattgtca 21088133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 31079566 - 31079602
Alignment:
Q  39 tgataccatcttagaaatcatgattgggcctaacaca 75  Q
    ||||||||||||||||||| | |||||||||||||||    
T  31079566 tgataccatcttagaaatctttattgggcctaacaca 31079602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 48243422 - 48243524
Alignment:
Q  33 agactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtca 127  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||   |||     || | |||||||||||||||||||||||||||||    
T  48243422 agactctgataccatcttaaaaatcatggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaacacattgtca 48243521  T
Q  128 ggc 130  Q
    |||    
T  48243522 ggc 48243524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 25620232 - 25620134
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||   |||      | | |||||||||||||||||||||||||||||||    
T  25620232 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagg 25620134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 29469701 - 29469602
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||| ||||||||| || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||||    
T  29469701 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 29469602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 6634940 - 6634852
Alignment:
Q  47 tcttagaaatcatgattgggcctaacacaa-cccacaaaacttactta----ataaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||| ||||||||||||||| |||||||||||  ||||     | | ||||||||||||||||||||| ||||||||||    
T  6634940 tcttagaaatcatggttgggcctaacacaaccccacaaaactagcttatgaggtgaggattgcccccacttataaacaaattgtcaggc 6634852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 10882227 - 10882270
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  10882227 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 10882270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 33996299 - 33996350
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 86  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  33996299 ctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaac 33996350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 40121912 - 40121955
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  40121912 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 40121955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 4886429 - 4886383
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaacc 78  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||    
T  4886429 gagaccctgataccatcttagaaatcgtggttgggcctaacacaacc 4886383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 21821902 - 21821852
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaa 85  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  21821902 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaa 21821852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 21861390 - 21861291
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | |||||||| |||||||||||||||||||||||    
T  21861390 ctctgataccatcttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacattgtcaggc 21861291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 31257255 - 31257352
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 128  Q
    |||||||||||| ||||||||| || ||||||||||||||| ||||||||||   |||    | ||| ||||||||||||||||||| | ||||||||    
T  31257255 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaattaaggattgcccccacttataaataaattgtcag 31257352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 3038072 - 3038115
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||    
T  3038072 ctctgatattatcttagaaatcatggttgggcctaacacaaccc 3038115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 21861557 - 21861526
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  21861557 gattgcccccacttataaacacattgtcaggc 21861526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 29469868 - 29469837
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  29469868 gattgcccccacttataaacacattgtcaggc 29469837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 31485480 - 31485511
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  31485480 gattgcccccacttataaacacattgtcaggc 31485511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 33834287 - 33834244
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||  || ||||||||||||||||||    
T  33834287 ctctgataccatcttagaaatggtggttgggcctaacacaaccc 33834244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 34027712 - 34027624
Alignment:
Q  47 tcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||| |||||||||||||||||| ||||||||||   |||    | | | ||||||||||||||||||||| ||||||||||    
T  34027712 tcttagaaatcgtgattgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgcccccacttataaacaaattgtcaggc 34027624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 36277282 - 36277313
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  36277282 gattgcccccacttataaacacattgtcaggc 36277313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 43688215 - 43688246
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  43688215 gattgcccccacttataaacacattgtcaggc 43688246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 26239894 - 26240001
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacac 120  Q
    |||| |||| |||||||||||||||||||||  || ||||| ||||||||| ||||||| ||  ||||      | | ||||||||||||||||||||||    
T  26239894 ttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaaccccacaataccgacttgtgaggtgaggattgcccccacttataaacac 26239993  T
Q  121 attgtcag 128  Q
    ||||||||    
T  26239994 attgtcag 26240001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 2404230 - 2404259
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  2404230 gattgcccccacttataaacacattgtcag 2404259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 3520096 - 3520125
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  3520096 gattgcccccacttataaacacattgtcag 3520125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 4454804 - 4454775
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  4454804 gattgcccccacttataaacacattgtcag 4454775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 5871795 - 5871852
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaact 87  Q
    |||| |||||||| ||||||||||||| || ||||| |||||||||||| ||||||||    
T  5871795 ggaggctctgatatcatcttagaaatcgtggttgggactaacacaaccctacaaaact 5871852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 26562127 - 26562160
Alignment:
Q  97 aagattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||| ||||||||||    
T  26562127 aagattgcccccacttataaacaaattgtcaggc 26562160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 36993072 - 36993105
Alignment:
Q  46 atcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||| ||||||||||||||||||    
T  36993072 atcttagaaatcatggttgggcctaacacaaccc 36993105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 48243117 - 48243146
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  48243117 gattgcccccacttataaacacattgtcag 48243146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 7786253 - 7786285
Alignment:
Q  47 tcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||| ||||||||||||||||||    
T  7786253 tcttagaaatcatggttgggcctaacacaaccc 7786285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 35308202 - 35308230
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  35308202 gattgcccccacttataaacacattgtca 35308230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 36993296 - 36993336
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa 76  Q
    ||||||||||||||||||||||||| ||||  |||||||||    
T  36993296 ctctgataccatcttagaaatcatggttggatctaacacaa 36993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 4098391 - 4098482
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttact--taa--taaagattgcccccacttataaacacatt 123  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||  |||  |||  | | |||||||||||||||||||||||||    
T  4098391 ctctgataccaacttagaaatcgtggttgggcctaacacaacccacaaaaccaacttgtaaggtgaggattgcccccacttataaacacatt 4098482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 38668221 - 38668125
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||| |  |||     || | |||||||||||||||||||||||||||||    
T  38668221 ctctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaattggcttgtgagatgatgattgcccccacttataaacacattgtca 38668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 25145708 - 25145751
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  25145708 ctctgatatcatcttagaaatcatggttgggcctaacacaaccc 25145751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 29266049 - 29266006
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  29266049 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 29266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 35772125 - 35772082
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  35772125 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 35772082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 4112998 - 4113093
Alignment:
Q  40 gataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||||    
T  4112998 gataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaggc 4113093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 3169863 - 3169765
Alignment:
Q  35 actctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||| ||||||||| || ||||||||||||||| ||||||||||   |||      | ||||||||||||||||||||||| ||||||||    
T  3169863 actctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaacaaattgtcag 3169765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 39348331 - 39348383
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| |||| |||||||||||||||||||||| || ||||||||||||||||||    
T  39348331 ttggaggaggctctgataccatcttagaaatcgtg-ttgggcctaacacaaccc 39348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 30369931 - 30369879
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaact 87  Q
    ||||||||| |||||||||||| || ||||||||||||||| |||||||||||    
T  30369931 ctctgatacaatcttagaaatcgtggttgggcctaacacaaccccacaaaact 30369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 35772350 - 35772261
Alignment:
Q  46 atcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaa----taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||| || |||||||||||||||||| |||||||   |||      ||| ||||||||||||||||||||||||||||||||    
T  35772350 atcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacacattgtcaggc 35772261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 2859448 - 2859479
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  2859448 gattgcccccacttataaacacattgtcaggc 2859479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 8870894 - 8870941
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||    
T  8870894 gagactctgataccatcttagaaatggtggttggacctaacacaaccc 8870941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 15986389 - 15986420
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  15986389 gattgcccccacttataaacacattgtcaggc 15986420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 33156829 - 33156786
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| ||||||||||||||||| || ||||||||||||||||||    
T  33156829 ctctaataccatcttagaaatcgtggttgggcctaacacaaccc 33156786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 51589902 - 51589859
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  51589902 ctctgataccatattagaaatcgtggttgggcctaacacaaccc 51589859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 2120172 - 2120130
Alignment:
Q  37 tctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||    
T  2120172 tctgatatcatcttagaaatcgtgattggacctaacacaaccc 2120130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 16163197 - 16163167
Alignment:
Q  97 aagattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||||    
T  16163197 aagattgcccccacttataaacacattgtca 16163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 17452816 - 17452915
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaata----aagattgcccccacttataaacacattgtcaggc 130  Q
    |||| ||||||||||||||||| || || ||||||||||||||| |||||||   |||   |    ||||||||||||||||||||| ||||||||||||    
T  17452816 ctctaataccatcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaatacattgtcaggc 17452915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 35892390 - 35892344
Alignment:
Q  33 agactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||||| ||| ||| |||||||| |||||    
T  35892390 agactctgataccatcttagaaattatggttgagcctaacagaaccc 35892344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 129
Target Start/End: Complemental strand, 40079180 - 40079150
Alignment:
Q  99 gattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||||||||||||||||||||    
T  40079180 gattgcccccacttataaacacattgtcagg 40079150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 11524883 - 11524826
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaact 87  Q
    |||| |||||||||||||||||||||  ||  |||||||||||||||| |||||||||    
T  11524883 ggaggctctgataccatcttagaaattgtggatgggcctaacacaacctcacaaaact 11524826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 20208582 - 20208611
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  20208582 gattgcccccacttataaacacattgtcag 20208611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 21626399 - 21626457
Alignment:
Q  103 gcccccacttataaacacattgtcaggcgggccatctcttatatgatgt-ggactctttaaca 164  Q
    ||||||||||||||||| |||||||    ||||||||||||| |||||| |||||||||||||    
T  21626399 gcccccacttataaacatattgtca----ggccatctcttatctgatgtgggactctttaaca 21626457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 25713421 - 25713392
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  25713421 gattgcccccacttataaacacattgtcag 25713392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 26173280 - 26173309
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  26173280 gattgcccccacttataaacacattgtcag 26173309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 33157307 - 33157274
Alignment:
Q  46 atcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| |||||||||||||||||||||    
T  33157307 atcttagaaatcgtgattgggcctaacacaaccc 33157274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 8870745 - 8870773
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  8870745 gattgcccccacttataaacacattgtca 8870773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 11525098 - 11525042
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 86  Q
    |||| |||||||||||||||||||||  ||  |||||||||||||||| ||||||||    
T  11525098 ggaggctctgataccatcttagaaattgtggatgggcctaacacaacctcacaaaac 11525042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 26173513 - 26173541
Alignment:
Q  100 attgcccccacttataaacacattgtcag 128  Q
    |||||||||||||||||||||||||||||    
T  26173513 attgcccccacttataaacacattgtcag 26173541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 38668388 - 38668360
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  38668388 gattgcccccacttataaacacattgtca 38668360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 38733251 - 38733207
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaa 76  Q
    |||||||||||||||||||||||||| || |||  ||||||||||    
T  38733251 gagactctgataccatcttagaaatcgtggttgaacctaacacaa 38733207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 51460430 - 51460482
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaact 87  Q
    |||||||| ||| |||||||| ||| ||||||||||||||| |||||||||||    
T  51460430 ctctgatatcattttagaaattatggttgggcctaacacaaccccacaaaact 51460482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 9705126 - 9705017
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacac 120  Q
    |||| |||| |||||||||||||||||||||  || ||||||||||||||| ||||||||||  ||||      | | ||||||||||||||||||||||    
T  9705126 ttggaggaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataaacac 9705027  T
Q  121 attgtcaggc 130  Q
    ||||||||||    
T  9705026 attgtcaggc 9705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 4868791 - 4868844
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| |||| |||||||||||||||||||||| || ||||||||||||||||||    
T  4868791 ttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccc 4868844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 8001533 - 8001582
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaaccca 80  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||    
T  8001533 ggagactctgataccatcttagaaattgtggttgggcctaacacaaccca 8001582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 13353297 - 13353198
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||  || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||||    
T  13353297 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 13353198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 33796422 - 33796323
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||  || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||||    
T  33796422 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 33796323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 20373667 - 20373623
Alignment:
Q  35 actctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||    
T  20373667 actctgataccatcttataaatcgtggttgggcctaacacaaccc 20373623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 4868633 - 4868664
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  4868633 gattgcccccacttataaacacattgtcaggc 4868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 8026485 - 8026442
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  8026485 ctctgataccatattagaaatcgtggttgggcctaacacaaccc 8026442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 12330167 - 12330218
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 86  Q
    |||||||||||| ||||||||| || ||||||||||||||||| ||||||||    
T  12330167 ctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaac 12330218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 27653313 - 27653262
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 86  Q
    |||||||||||| ||||||||| || ||||||||||||||| ||||||||||    
T  27653313 ctctgataccatattagaaatcgtggttgggcctaacacaatcccacaaaac 27653262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 30256674 - 30256631
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  30256674 ctctgataccaccttagaaatcgtggttgggcctaacacaaccc 30256631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 30256908 - 30256865
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  30256908 ctctgataccatattagaaatcgtggttgggcctaacacaaccc 30256865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 31961206 - 31961175
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  31961206 gattgcccccacttataaacacattgtcaggc 31961175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 3680107 - 3680065
Alignment:
Q  37 tctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  3680107 tctgataccatcttagaaattgtggttgggcctaacacaaccc 3680065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 15082133 - 15082183
Alignment:
Q  37 tctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 86  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||||||||    
T  15082133 tctgataccatattagaaatcgtgtttgggcctaacacaatcccacaaaac 15082183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 16570244 - 16570157
Alignment:
Q  47 tcttagaaatcatgattgggcctaacacaa-cccacaaaacttacttaata----aagattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||| ||||||||||||||| ||||||||||  ||||  ||    | |||| ||||| ||||||||||||||||||||    
T  16570244 tcttagaaatcatggttgggcctaacacaaccccacaaaaccgacttgttacgtgaggattacccccgcttataaacacattgtcagg 16570157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 33494634 - 33494592
Alignment:
Q  37 tctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  33494634 tctgataccatcttagaaatggtggttgggcctaacacaaccc 33494592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 3680274 - 3680245
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  3680274 gattgcccccacttataaacacattgtcag 3680245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 6542999 - 6543028
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  6542999 gattgcccccacttataaacacattgtcag 6543028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 10145735 - 10145795
Alignment:
Q  33 agactctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt 92  Q
    ||||||||||| ||||||||||||  || ||| |||||||||||||| |||||||| ||||    
T  10145735 agactctgatatcatcttagaaattgtggttgagcctaacacaaccctacaaaactgactt 10145795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 11085670 - 11085626
Alignment:
Q  43 accatcttagaaatcatgattgggcctaacacaacc-cacaaaac 86  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||    
T  11085670 accatcttagaaatcgtgattggacctaacacaaccgcacaaaac 11085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 27036403 - 27036499
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaata-aagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||   ||||  |   ||||||||||||||||||||| ||||||||||    
T  27036403 ctctgataccatattagaaatcatggttgggcctaacacaaccctacaaaaccggcttatgaggggattgcccccacttataaacaaattgtcaggc 27036499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 5509175 - 5509132
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  5509175 ctctgataccatattagaaatcatggttgggcctaacacaaccc 5509132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 5711653 - 5711762
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacac 120  Q
    |||| |||| ||||||||| |||||||||||  || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||    
T  5711653 ttggaggaggctctgatactatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttttaaggtgatgattgcccccacttataaacac 5711752  T
Q  121 attgtcaggc 130  Q
    ||||||||||    
T  5711753 attgtcaggc 5711762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 15124767 - 15124814
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||||||| || ||||| ||||||||||||    
T  15124767 gagactctgataccatcttagaaatcgtggttgggtctaacacaaccc 15124814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 28407781 - 28407832
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 86  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  28407781 ctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaac 28407832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 40379432 - 40379475
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  40379432 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 40379475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 93616 - 93658
Alignment:
Q  37 tctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  93616 tctgataccatcttagaaatcgtggttgggcctaacacaaccc 93658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 33381174 - 33381232
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaactt 88  Q
    ||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||||    
T  33381174 ggagactctaataccatcttagaaatcgtggttgggactaacacaacctcacaaaactt 33381232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 14466398 - 14466497
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | |||||| |||||||||||||||||||||||||    
T  14466398 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgctcccacttataaacacattgtcaggc 14466497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 21383648 - 21383709
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 86  Q
    |||| |||| |||||||||||||||||||||| || ||||||||||| ||| ||||||||||    
T  21383648 ttggaggaggctctgataccatcttagaaatcgtggttgggcctaactcaatcccacaaaac 21383709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 10571067 - 10571023
Alignment:
Q  35 actctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||    
T  10571067 actctgataccatcttagaaatcgtggttgagcctaacacaaccc 10571023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 93342 - 93385
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||| ||||| || ||||||||||||||||||    
T  93342 ctctgataccatcttaaaaatcgtggttgggcctaacacaaccc 93385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 2029865 - 2029822
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || |||||||||| |||||||    
T  2029865 ctctgataccatcttagaaatcgtggttgggcctaaaacaaccc 2029822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 5711495 - 5711526
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  5711495 gattgcccccacttataaacacattgtcaggc 5711526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 14927188 - 14927100
Alignment:
Q  46 atcttagaaatcatgattgggcctaacacaacc-cacaaaacttacttaata----aagattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||| || ||| ||||||||||||| |||||| || |||||  |    | |||||||||||||||||||||||||||||||    
T  14927188 atcttagaaatcgtggttgagcctaacacaaccacacaaagctgacttatgaggtgaggattgcccccacttataaacacattgtcagg 14927100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 16419363 - 16419320
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || |||||||||| |||||||    
T  16419363 ctctgataccatcttagaaatcgtggttgggcctaatacaaccc 16419320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 16533575 - 16533544
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  16533575 gattgcccccacttataaacacattgtcaggc 16533544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 17719428 - 17719397
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  17719428 gattgcccccacttataaacacattgtcaggc 17719397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 21591882 - 21591835
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||| ||||| |||||||||| || ||||||||||||||||||    
T  21591882 gagactctgctaccaacttagaaatcgtggttgggcctaacacaaccc 21591835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 27897590 - 27897637
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||| ||||||||||||||||||  || ||||||||||||||||||    
T  27897590 gagactttgataccatcttagaaatggtggttgggcctaacacaaccc 27897637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 5206799 - 5206737
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaacttactt 92  Q
    ||||||||||||| ||||||||||||| |||||| | || |||||||| ||||||||| ||||    
T  5206799 ggagactctgataacatcttagaaatcgtgattgagtcttacacaacctcacaaaactgactt 5206737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 129
Target Start/End: Original strand, 37812554 - 37812584
Alignment:
Q  99 gattgcccccacttataaacacattgtcagg 129  Q
    |||||||||||||||||||||||||||||||    
T  37812554 gattgcccccacttataaacacattgtcagg 37812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 16419530 - 16419501
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  16419530 gattgcccccacttataaacacattgtcag 16419501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 17525394 - 17525423
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  17525394 gattgcccccacttataaacacattgtcag 17525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 32356481 - 32356386
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaacttacttaa---taaagattgcccccacttataaacacattgtca 127  Q
    ||||||||||| ||||||| || |  |||||||||||||||| ||||||||||  |||     | | |||||||||||||||||||||||||||||    
T  32356481 ctctgataccaacttagaattcgtagttgggcctaacacaactccacaaaactggcttgtgggtgaggattgcccccacttataaacacattgtca 32356386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 93182 - 93210
Alignment:
Q  102 tgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||||||||||    
T  93182 tgcccccacttataaacacattgtcaggc 93210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 40149224 - 40149264
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa 76  Q
    |||||||||||||||||||||  || |||||||||||||||    
T  40149224 ctctgataccatcttagaaattgtggttgggcctaacacaa 40149264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 12869247 - 12869294
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  12869247 gagactctgataccatcttagaaatcgtggttgggcctaacacaaccc 12869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 17111662 - 17111616
Alignment:
Q  33 agactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  17111662 agactctgataccatcttagaaatcgtggttgggcctaacacaaccc 17111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 52559668 - 52559565
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgt 125  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||   |||      | | |||||||||||||||||||||||||||    
T  52559668 ggaggctctgatactatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgt 52559569  T
Q  126 cagg 129  Q
    ||||    
T  52559568 cagg 52559565  T

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Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 52827413 - 52827455
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacc 78  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  52827413 ctctgataccatcttagaaatcatggttgggcctaacacaacc 52827455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 35788765 - 35788712
Alignment:
Q  26 ttggtggagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| |||| |||||||||||||||||||||| || ||||||||||||||||||    
T  35788765 ttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccc 35788712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 22231296 - 22231339
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  22231296 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 22231339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 40716609 - 40716652
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  40716609 ctctgataccatcttagaaaccatggttgggcctaacacaaccc 40716652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 40717429 - 40717472
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  40717429 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 40717472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 44118915 - 44118986
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggcgggccatctcttatatgatgt-ggactctttaacatgtttttct 173  Q
    |||| ||||||||||||||||||||||||    |||||||||||||  ||||| |||||||||||||| |||||||    
T  44118915 gattacccccacttataaacacattgtca----ggccatctcttatccgatgtgggactctttaacatttttttct 44118986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 24513343 - 24513391
Alignment:
Q  31 ggagactctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||| |||||||| ||| ||||||||| |||||||||||||||||||||    
T  24513343 ggaggctctgatatcatgttagaaatcgtgattgggcctaacacaaccc 24513391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 35819112 - 35819168
Alignment:
Q  32 gagactctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaact 87  Q
    ||||||||||| |||||||| ||||| || ||||||||||||||||| |||||||||    
T  35819112 gagactctgatgccatcttaaaaatcgtggttgggcctaacacaacctcacaaaact 35819168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 1518260 - 1518217
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || || |||||||||||||||    
T  1518260 ctctgataccatcttagaaatcgtggttaggcctaacacaaccc 1518217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 9279255 - 9279224
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  9279255 gattgcccccacttataaacacattgtcaggc 9279224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 9685494 - 9685443
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 86  Q
    |||||||||||| ||||||||| || ||||||||||||||||| ||||||||    
T  9685494 ctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaac 9685443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 11036802 - 11036833
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  11036802 gattgcccccacttataaacacattgtcaggc 11036833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 14783175 - 14783218
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  14783175 ctctgataccatattagaaatcgtggttgggcctaacacaaccc 14783218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 22863502 - 22863471
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  22863502 gattgcccccacttataaacacattgtcaggc 22863471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 25052948 - 25052905
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  25052948 ctctgataccatgttagaaatcgtggttgggcctaacacaaccc 25052905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 27634137 - 27634168
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  27634137 gattgcccccacttataaacacattgtcaggc 27634168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 28245582 - 28245613
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  28245582 gattgcccccacttataaacacattgtcaggc 28245613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 31254463 - 31254494
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  31254463 gattgcccccacttataaacacattgtcaggc 31254494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 35609699 - 35609742
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||||||||||||||||||||||| ||||| || |||||||||    
T  35609699 ctctgataccatcttagaaatcatggttgggtcttacacaaccc 35609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 35788687 - 35788656
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  35788687 gattgcccccacttataaacacattgtcaggc 35788656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 35788922 - 35788891
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  35788922 gattgcccccacttataaacacattgtcaggc 35788891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 39902619 - 39902650
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  39902619 gattgcccccacttataaacacattgtcaggc 39902650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 50543318 - 50543361
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||| ||||||||||||| || ||||||||||||||||||    
T  50543318 ctctgataacatcttagaaatcgtggttgggcctaacacaaccc 50543361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 50543555 - 50543606
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 86  Q
    |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  50543555 ctctgatatcatcttagaaatcgtggttgggcctaacacaactccacaaaac 50543606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 53828511 - 53828554
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||  || ||||||||||||||||||    
T  53828511 ctctgataccatcttagaaattgtggttgggcctaacacaaccc 53828554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 35645821 - 35645850
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  35645821 gattgcccccacttataaacacattgtcag 35645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 7926643 - 7926611
Alignment:
Q  47 tcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||| ||||||||||||||||||    
T  7926643 tcttagaaatcatggttgggcctaacacaaccc 7926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 21750265 - 21750317
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaact 87  Q
    |||||||||||||||| || || |||||||| ||||||||||| |||||||||    
T  21750265 ctctgataccatcttaaaattcgtgattgggtctaacacaacctcacaaaact 21750317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 23209934 - 23209894
Alignment:
Q  39 tgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    ||||| ||||||||||||| |||||||||||||| ||||||    
T  23209934 tgatatcatcttagaaatcgtgattgggcctaactcaaccc 23209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 28246141 - 28246169
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  28246141 gattgcccccacttataaacacattgtca 28246169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 35796798 - 35796826
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  35796798 gattgcccccacttataaacacattgtca 35796826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 81938 - 81839
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||  |||  |||  | || |||| ||||||||||||||| ||||||||||    
T  81938 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtaaggtgaaaattgtccccacttataaacatattgtcaggc 81839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 5742 - 5839
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 128  Q
    |||||||||||||||||||||| || ||||||||||||||| ||| ||||||   |||     || | ||||||||||||||||||||||||||||||    
T  5742 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcag 5839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Original strand, 5600 - 5628
Alignment:
Q  99 gattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||||||||||||    
T  5600 gattgcccccacttataaacacattgtca 5628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 2012 - 1915
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcag 128  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | ||||||||||||||||||||||||||||||    
T  2012 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 1915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 2179 - 2148
Alignment:
Q  99 gattgcccccacttataaacacattgtcaggc 130  Q
    ||||||||||||||||||||||||||||||||    
T  2179 gattgcccccacttataaacacattgtcaggc 2148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 51330 - 51236
Alignment:
Q  38 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaata----aagattgcccccacttataaacacattgtca 127  Q
    |||||||||||||||||||  |||||| || ||||||||||| |||||||| ||||   |    | |||||||||||||||||||||||||||||    
T  51330 ctgataccatcttagaaattgtgattgagcataacacaaccccacaaaactgacttgtgaggtgaggattgcccccacttataaacacattgtca 51236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 3459 - 3502
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||    
T  3459 ctctgataccatattagaaatcgtgattgggtctaacacaaccc 3502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 14399 - 14356
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||| | || ||||||||||||||||||    
T  14399 ctctgataccatcttagaaaacgtggttgggcctaacacaaccc 14356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 5751 - 5708
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||||||||||||| || ||||| ||||||||||||    
T  5751 ctctgataccatcttagaaatcgtggttgggtctaacacaaccc 5708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 56555 - 56512
Alignment:
Q  36 ctctgataccatcttagaaatcatgattgggcctaacacaaccc 79  Q
    |||||||||||| ||||||||| || ||||||||||||||||||    
T  56555 ctctgataccatattagaaatcgtggttgggcctaacacaaccc 56512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 288656 - 288696
Alignment:
Q  47 tcttagaaatcatgattgggcctaacacaac-ccacaaaac 86  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  288656 tcttagaaatcatggttgggcctaacacaactccacaaaac 288696  T

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Target: scaffold0766 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 6302 - 6273
Alignment:
Q  99 gattgcccccacttataaacacattgtcag 128  Q
    ||||||||||||||||||||||||||||||    
T  6302 gattgcccccacttataaacacattgtcag 6273  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 429898 - 429870
Alignment:
Q  102 tgcccccacttataaacacattgtcaggc 130  Q
    |||||||||||||||||||||||||||||    
T  429898 tgcccccacttataaacacattgtcaggc 429870  T

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