View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13461_high_2 (Length: 478)

Name: NF13461_high_2
Description: NF13461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13461_high_2
NF13461_high_2
[»] chr2 (4 HSPs)
chr2 (17-477)||(35738467-35738927)
chr2 (25-63)||(19298185-19298223)
chr2 (25-63)||(40468706-40468744)
chr2 (25-65)||(8029624-8029664)
[»] scaffold0225 (1 HSPs)
scaffold0225 (289-476)||(9887-10075)
[»] chr8 (2 HSPs)
chr8 (248-364)||(19793717-19793833)
chr8 (25-63)||(13462510-13462548)
[»] chr3 (6 HSPs)
chr3 (289-476)||(20963382-20963570)
chr3 (351-396)||(15790825-15790870)
chr3 (25-63)||(17514343-17514381)
chr3 (25-63)||(32304886-32304924)
chr3 (25-63)||(34817735-34817773)
chr3 (375-467)||(43843486-43843578)
[»] chr7 (6 HSPs)
chr7 (303-450)||(28264459-28264606)
chr7 (351-457)||(24446129-24446235)
chr7 (25-63)||(17278804-17278842)
chr7 (25-63)||(30766049-30766087)
chr7 (355-396)||(41893339-41893380)
chr7 (185-233)||(8685047-8685095)
[»] chr5 (4 HSPs)
chr5 (367-477)||(33957228-33957338)
chr5 (185-238)||(22165864-22165917)
chr5 (25-63)||(6794399-6794437)
chr5 (25-63)||(23082943-23082981)
[»] chr6 (3 HSPs)
chr6 (25-63)||(12261105-12261143)
chr6 (25-62)||(16146482-16146519)
chr6 (25-62)||(27129247-27129284)
[»] chr1 (4 HSPs)
chr1 (25-63)||(36142518-36142556)
chr1 (25-63)||(47112497-47112535)
chr1 (351-396)||(39201228-39201273)
chr1 (355-396)||(46592958-46592999)
[»] chr4 (2 HSPs)
chr4 (25-65)||(9086951-9086991)
chr4 (25-65)||(40680855-40680895)


Alignment Details
Target: chr2 (Bit Score: 445; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 17 - 477
Target Start/End: Complemental strand, 35738927 - 35738467
Alignment:
Q  17 aataggtatgaagattttggttgattttccaattgttagtgaatctgaagatgaaattttttggaaaataggtacgtgtgataatggatataacattaca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35738927 aataggtatgaagattttggttgattttccaattgttagtgaatctgaagatgaaattttttggaaaataggtacgtgtaataatggatataacattaca 35738828  T
Q  117 atccccttcctgctttaaattattatttggttctgccatttaattgatttttccttctaaataggttggaagattttgtttgatttggtttgtggagatt 216  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35738827 atccccttcctgctttaaattataatttggttctgccatttaattgatttttccttctaaataggttggaagattttgtttgatttggtttgtggagatt 35738728  T
Q  217 gagaatgtgtgttgtttgaaatagaattgggaattgagaagcaataaaggaagatttcgtagttgaattcttgtgatgagagaatgaagaagatgaaggg 316  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35738727 gagaatgtatgttgtttgaaatagaattgggaattgagaagtaataaaggaagatttcgtagttgaattcttgtgatgagagaatgaagaagatgaaggg 35738628  T
Q  317 acaatccctgatggtgaaccacaaagcaaggacattgttgttgttgatattgttcttcctatttttcagaaattgttgaatacaaattttagtcaatctc 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35738627 acaatccctgatggtgaaccacaaagcaaggacattgttgttgttgatattgttcttcctatttttcagaaattgttgaatacaaattttagtcaatctc 35738528  T
Q  417 aagatgagacttgtacaaaccctaatgtattttttactaaactaacggaaatgaccaaaat 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35738527 aagatgagacttgtacaaaccctaatgtattttttactaaactaacggaaatgaccaaaat 35738467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 19298185 - 19298223
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  19298185 tgaagattttggttgattttcccattgttattgaatctg 19298223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 40468706 - 40468744
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  40468706 tgaagattttggttgattttcccattgttattgaatctg 40468744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 8029624 - 8029664
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctgaa 65  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  8029624 tgaagattttggttgatttttctattgttattgaatctgaa 8029664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 289 - 476
Target Start/End: Complemental strand, 10075 - 9887
Alignment:
Q  289 gtgatgagagaatgaa-gaagatgaagggacaatccctgatggtgaaccacaaagcaaggacattgttgttgttgatattgttcttcctatttttcagaa 387  Q
    |||||| ||||||||| |||||||||||||  ||| |||||||||||||||||||||||||  |||||||| |||||  |||| |||||||||| |||||    
T  10075 gtgatgggagaatgaaagaagatgaagggaacatcactgatggtgaaccacaaagcaaggaagttgttgttcttgatggtgttgttcctattttccagaa 9976  T
Q  388 attgttgaatacaaattttagtcaatctcaagatgagacttgtacaaaccctaatgtattttttactaaactaacggaaatgaccaaaa 476  Q
     ||| ||||||||||||| || ||||  ||| |||| ||||||||||||||||| || ||||| |  ||||||||||||| ||| ||||    
T  9975 tttgatgaatacaaatttcagccaatgacaaaatgacacttgtacaaaccctaacgtttttttaataaaactaacggaaaggactaaaa 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 248 - 364
Target Start/End: Complemental strand, 19793833 - 19793717
Alignment:
Q  248 aattgagaagcaataaaggaagatttcgtagttgaattcttgtgatgagagaatgaagaagatgaagggacaatccctgatggtgaaccacaaagcaagg 347  Q
    |||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||| |||||||    
T  19793833 aattgagaagaaagaaaggaagatttagaagttgaattcttgtgatgagagaatgaagaagatgaagggaacgtcactgatggtgaaccacacagcaagg 19793734  T
Q  348 acattgttgttgttgat 364  Q
    ||||||||| |||||||    
T  19793733 acattgttgctgttgat 19793717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 13462548 - 13462510
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  13462548 tgaagattttggttgattttcccattgttattgaatctg 13462510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 476
Target Start/End: Original strand, 20963382 - 20963570
Alignment:
Q  289 gtgatgagagaatgaa-gaagatgaagggacaatccctgatggtgaaccacaaagcaaggacattgttgttgttgatattgttcttcctatttttcagaa 387  Q
    |||||| ||||||||| ||| |||||| ||  ||| |||||||||||||||||||||||||  |||||||| |||||  |||| |||||||||| |||||    
T  20963382 gtgatgggagaatgaaagaatatgaagagaacatcactgatggtgaaccacaaagcaaggaagttgttgttcttgatggtgttgttcctattttccagaa 20963481  T
Q  388 attgttgaatacaaattttagtcaatctcaagatgagacttgtacaaaccctaatgtattttttactaaactaacggaaatgaccaaaa 476  Q
     ||  ||||||||||||| || ||||  ||| |||| ||||||||||| |||||  | ||||| |  ||||||||||||| ||| ||||    
T  20963482 ttttatgaatacaaatttcagccaatgacaaaatgacacttgtacaaatcctaacttttttttaataaaactaacggaaaggactaaaa 20963570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 15790870 - 15790825
Alignment:
Q  351 ttgttgttgttgatattgttcttcctatttttcagaaattgttgaa 396  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||    
T  15790870 ttgttgttgttgatggtgttcttcctatttttcagaaattgatgaa 15790825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 17514343 - 17514381
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  17514343 tgaagattttggttgattttcccattgttattgaatctg 17514381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 32304886 - 32304924
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  32304886 tgaagattttggttgattttcccattgttattgaatctg 32304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 34817773 - 34817735
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  34817773 tgaagattttggttgattttcccattgttattgaatctg 34817735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 467
Target Start/End: Complemental strand, 43843578 - 43843486
Alignment:
Q  375 ctatttttcagaaattgttgaatacaaattttagtcaatctcaagatgagacttgtacaaaccctaatgtattttttactaaactaacggaaa 467  Q
    ||||||| || |||||| ||||||||||||  |||||||  ||| |||| ||||||| ||||||||| || || || | |||||| |||||||    
T  43843578 ctattttccaaaaattgatgaatacaaattccagtcaatgacaaaatgacacttgtataaaccctaacgttttattaattaaactgacggaaa 43843486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 450
Target Start/End: Original strand, 28264459 - 28264606
Alignment:
Q  303 aagaagatgaagggacaatccctgatggtgaaccacaaagcaaggacattgttgttgttgatattgttcttcctatttttcagaaattgttgaatacaaa 402  Q
    ||||||||||||| |  ||| || ||||||||||||||||||||||  |||||||| |||||  | || |||||||||||||||| ||| ||||||||||    
T  28264459 aagaagatgaaggaaacatcactaatggtgaaccacaaagcaaggaagttgttgttcttgatggtattgttcctatttttcagaatttgatgaatacaaa 28264558  T
Q  403 ttttagtcaatctcaagatgagacttgtacaaaccctaatgtattttt 450  Q
    ||| || |||   ||| |||| | ||||||||||||||| || |||||    
T  28264559 tttcagccaaagacaaaatgacatttgtacaaaccctaacgttttttt 28264606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 457
Target Start/End: Original strand, 24446129 - 24446235
Alignment:
Q  351 ttgttgttgttgatattgttcttcctatttttcagaaattgttgaatacaaattttagtcaatctcaagatgagacttgtacaaaccctaatgtattttt 450  Q
    ||||||||||||||  |||| |||||||||| ||||||||| ||||||||||||  |  ||||  ||| |||| | ||||||||||||||| || |||||    
T  24446129 ttgttgttgttgatggtgtttttcctattttccagaaattgatgaatacaaattccatccaatgacaaaatgacagttgtacaaaccctaacgttttttt 24446228  T
Q  451 tactaaa 457  Q
    || ||||    
T  24446229 taataaa 24446235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 17278842 - 17278804
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  17278842 tgaagattttggttgattttcccattgttattgaatctg 17278804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30766087 - 30766049
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  30766087 tgaagattttggttgattttcccattgttattgaatctg 30766049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 41893339 - 41893380
Alignment:
Q  355 tgttgttgatattgttcttcctatttttcagaaattgttgaa 396  Q
    ||||||||||  ||||||||||||||||||||||||| ||||    
T  41893339 tgttgttgatggtgttcttcctatttttcagaaattgatgaa 41893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 8685095 - 8685047
Alignment:
Q  185 gaagattttgtttgatttggtttgtggagattgagaatgtgtgttgttt 233  Q
    |||||||||| ||||||||||||  ||||||||||||  ||||||||||    
T  8685095 gaagattttggttgatttggtttagggagattgagaaattgtgttgttt 8685047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 33957228 - 33957338
Alignment:
Q  367 tgttcttcctatttttcagaaattgttgaatacaaattttagtcaatctcaagatgagacttgtacaaaccctaatgtattttttactaaactaacggaa 466  Q
    ||||||| |||||||| |||||||| |||||||||||||  | |||   ||| |||| |||||||||||||||||  | ||||| | ||||| |||||||    
T  33957228 tgttctttctatttttaagaaattgatgaatacaaatttcggccaacgacaaaatgacacttgtacaaaccctaacttttttttaattaaaccaacggaa 33957327  T
Q  467 atgaccaaaat 477  Q
    |||||||||||    
T  33957328 atgaccaaaat 33957338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 22165864 - 22165917
Alignment:
Q  185 gaagattttgtttgatttggtttgtggagattgagaatgtgtgttgtttgaaat 238  Q
    |||||||||| |||||||| ||| |||||||||||||| |||||||||||||||    
T  22165864 gaagattttggttgatttgatttatggagattgagaatttgtgttgtttgaaat 22165917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 6794399 - 6794437
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  6794399 tgaagattttggttgattttcccattgttattgaatctg 6794437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 23082981 - 23082943
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  23082981 tgaagattttggttgattttcccattgttattgaatctg 23082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 12261105 - 12261143
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  12261105 tgaagattttggttgattttcccattgttattgaatctg 12261143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 16146519 - 16146482
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatct 62  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  16146519 tgaagattttggttgattttcccattgttattgaatct 16146482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 27129284 - 27129247
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatct 62  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  27129284 tgaagattttggttgattttcccattgttattgaatct 27129247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 36142556 - 36142518
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  36142556 tgaagattttggttgattttcccattgttattgaatctg 36142518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 47112535 - 47112497
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctg 63  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  47112535 tgaagattttggttgattttcccattgttattgaatctg 47112497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 39201273 - 39201228
Alignment:
Q  351 ttgttgttgttgatattgttcttcctatttttcagaaattgttgaa 396  Q
    ||||||||||||||  ||||||||||||||| ||||||||| ||||    
T  39201273 ttgttgttgttgatgatgttcttcctattttccagaaattgatgaa 39201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 396
Target Start/End: Complemental strand, 46592999 - 46592958
Alignment:
Q  355 tgttgttgatattgttcttcctatttttcagaaattgttgaa 396  Q
    ||||||||||  ||||||||||||||||||||||||| ||||    
T  46592999 tgttgttgatggtgttcttcctatttttcagaaattgatgaa 46592958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 9086951 - 9086991
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctgaa 65  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  9086951 tgaagattttggttgattttctcattgttattgaatctgaa 9086991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 40680895 - 40680855
Alignment:
Q  25 tgaagattttggttgattttccaattgttagtgaatctgaa 65  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  40680895 tgaagattttggttgatttttccattgttattgaatctgaa 40680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University