View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13462_high_5 (Length: 412)
Name: NF13462_high_5
Description: NF13462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13462_high_5 |
 | |
|
| [»] chr3 (6 HSPs) |
| |
|
| [»] chr7 (7 HSPs) |
| |
|
| [»] chr6 (1 HSPs) |
| |
|
| [»] chr8 (4 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] chr2 (5 HSPs) |
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| [»] scaffold0003 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 380; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 9 - 412
Target Start/End: Complemental strand, 42794384 - 42793981
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42794384 |
cgaaaaataccaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
42794285 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
208 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42794284 |
agatagtgtgcgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
42794185 |
T |
|
| Q |
209 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccca |
308 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
42794184 |
cctttggaaatccgcttcaaatatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttatccca |
42794085 |
T |
|
| Q |
309 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
408 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42794084 |
accatttttctcttaaggttattggagaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
42793985 |
T |
|
| Q |
409 |
ttgc |
412 |
Q |
| |
|
|||| |
|
|
| T |
42793984 |
ttgc |
42793981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 9 - 412
Target Start/End: Complemental strand, 46428454 - 46428051
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
46428454 |
cgaaaaataccaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgattcaaccttcctgaggtcgtttccatcctatgt |
46428355 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
208 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46428354 |
agatagtgtctgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
46428255 |
T |
|
| Q |
209 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccca |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
46428254 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacatagtcataaaggtggtctgccatctagatgtgtttgtccca |
46428155 |
T |
|
| Q |
309 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46428154 |
accatttttctcttaaggttattggaaaaccaatccccacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
46428055 |
T |
|
| Q |
409 |
ttgc |
412 |
Q |
| |
|
|||| |
|
|
| T |
46428054 |
ttgc |
46428051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 9 - 412
Target Start/End: Original strand, 54812549 - 54812952
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54812549 |
cgaaaaataccaccacaaccggaaatatgacccatatccttgcaggcaccgtcgccgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
54812648 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
208 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54812649 |
agatagtgtccgtcaacttaggccctctatgaaagagctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
54812748 |
T |
|
| Q |
209 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccca |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
54812749 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaatatcaacacgtagtcataaaggtggtctgccatctacatgtgcttgtccca |
54812848 |
T |
|
| Q |
309 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
54812849 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataacgttggaaggaacaatatgaagccatacctgag |
54812948 |
T |
|
| Q |
409 |
ttgc |
412 |
Q |
| |
|
|||| |
|
|
| T |
54812949 |
ttgc |
54812952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 9 - 242
Target Start/End: Original strand, 43912553 - 43912791
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
43912553 |
cgaaaaatatcaccacaaccgaaaatatgacccatatccttgcaggcatcgtcactgttgagcttgatccaacctttctgaggtcgtttccatcctatgt |
43912652 |
T |
|
| Q |
109 |
agatagt-----gtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggatta |
203 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||| |
|
|
| T |
43912653 |
agatagtattacttccttcaccttaggccctctatgaaggtactccaagttgtagtcttcaatatccctaacgaatctttggattaatatatttagattg |
43912752 |
T |
|
| Q |
204 |
ttcggcctttggaaatccgcttcaaagatagtcttgttc |
242 |
Q |
| |
|
||| |||||| |||||| ||||||||||||| |||||| |
|
|
| T |
43912753 |
ttcagcctttagaaatcaacttcaaagatagttttgttc |
43912791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 406
Target Start/End: Original strand, 27156674 - 27156864
Alignment:
| Q |
216 |
aaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtcccaaccattt |
315 |
Q |
| |
|
||||| |||||||| ||||| || |||||||| |||||||| |||||||| || ||||| || || ||| ||| || | ||| | ||||||| || | |
|
|
| T |
27156674 |
aaatcagcttcaaaaatagttttattcctccacttccacaagtaccaacatgtcgtcatgaaagttatcttccaacttaaagtgttcgtcccaat-atct |
27156772 |
T |
|
| Q |
316 |
ttctc-ttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctg |
406 |
Q |
| |
|
|||| || ||||||||| | ||||||||||| |||||||| |||||||| ||||||||||| || | ||||| || | |||||||||||| |
|
|
| T |
27156773 |
ttcttgttgaggttattgaagaaccaatccctgcaatcaaaagaaaagaaattagttataaaatcatatggaacgatgtaaagccatacctg |
27156864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 54346603 - 54346530
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||| || ||||| ||||| ||||| |
|
|
| T |
54346603 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttctcgaggccgcttccaacctatatagat |
54346530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 9 - 412
Target Start/End: Complemental strand, 24473346 - 24472943
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| ||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
24473346 |
cgaaaaataccaccaaacccagaaatatgacccatatccttgcaggcatcgtcgctgttgagcttgatccaactatcctgaggttgtttccatcctatgt |
24473247 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
208 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24473246 |
agataatgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
24473147 |
T |
|
| Q |
209 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccca |
308 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24473146 |
cctttggaaatccgcttcaaatatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtatgccatctagatgtgcttgtccca |
24473047 |
T |
|
| Q |
309 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24473046 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
24472947 |
T |
|
| Q |
409 |
ttgc |
412 |
Q |
| |
|
|||| |
|
|
| T |
24472946 |
ttgc |
24472943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 24472654 - 24472740
Alignment:
| Q |
41 |
catatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagatagtgtccgtcacctt |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
24472654 |
catatccttgcaggcaccgtcgctgttgagcttgatccaactatcctgaggttgtttccatcctatgtagataatgtccgtcacctt |
24472740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 29214059 - 29214190
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagatagtgtccgtcaccttaggccctctat |
138 |
Q |
| |
|
||||||| |||||| ||||| || || |||||||||||||||||||| |||| || ||||| ||||| |||||| | ||| ||| ||| || || ||| |
|
|
| T |
29214059 |
cccatattcttgcaagcaccatcactattgagcttgatccaaccttcatgagaccgcttccaacctatatagataatttccttcaactttggaccaatat |
29214158 |
T |
|
| Q |
139 |
gaaagtgctccaagttgtagtcttcaatatct |
170 |
Q |
| |
|
|||| |||||||| || |||||||||||||| |
|
|
| T |
29214159 |
gaaaatgctccaaattacagtcttcaatatct |
29214190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 28395677 - 28395757
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagatagtgtcc |
119 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| || ||| | ||||||| |||||||||| ||||| |
|
|
| T |
28395677 |
cccatatccttgcatgcgccatcactattgagcttgatccaaccttcttgtggttgcttccatcatatgtagataatgtcc |
28395757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 25713334 - 25713261
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
||||| |||||||| ||| | || ||||||||||||||||||||||| ||||| || ||||| ||||| ||||| |
|
|
| T |
25713334 |
cccatgtccttgcaagcatcatcactgttgagcttgatccaaccttcttgaggccgcttccaacctatatagat |
25713261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 8020075 - 8020148
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||| || ||||| ||||| ||||| |
|
|
| T |
8020075 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttctcgaggccgcttccaacctatatagat |
8020148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 48618802 - 48618729
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
|||||| ||||||| ||||| || || || ||||||||||||||||| ||||| || ||||| ||||| ||||| |
|
|
| T |
48618802 |
cccataaccttgcaagcaccatcactattaagcttgatccaaccttcttgaggccgcttccaacctatatagat |
48618729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 9 - 412
Target Start/End: Original strand, 1223263 - 1223665
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1223263 |
cgaaaaataccaccacaatcggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
1223362 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
208 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
1223363 |
agatagtgtctgtaaccttaggccctctatgaaagagctccaggttgtagtcttcaatatctctaacaaatgtttgg-ttagtatatttggattattcgg |
1223461 |
T |
|
| Q |
209 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccca |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1223462 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccca |
1223561 |
T |
|
| Q |
309 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
408 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1223562 |
accatttttctcttaaggtcattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacatgag |
1223661 |
T |
|
| Q |
409 |
ttgc |
412 |
Q |
| |
|
|||| |
|
|
| T |
1223662 |
ttgc |
1223665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 332; Significance: 0; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 9 - 391
Target Start/End: Original strand, 22065502 - 22065885
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22065502 |
cgaaaaataccaccacaaccgaaaatatgacccatatccttgcaggcaccgtcactgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
22065601 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatattt-ggattattcg |
207 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22065602 |
agatagtgttcgtcaccttaggccctctatgaaagagctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatattttggattattcg |
22065701 |
T |
|
| Q |
208 |
gcctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccc |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
22065702 |
gcctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacatagtcataaaggtggtatgtcatctagatgtgcttgtccc |
22065801 |
T |
|
| Q |
308 |
aaccatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaat |
391 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22065802 |
aaccatttttctcttaaggttattggaaaaccaatccctgcaatcaaaggaaaagaagttagttataaagtcgaaaggaacaat |
22065885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 23085242 - 23085315
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| ||||| || ||||| ||||| ||||| |
|
|
| T |
23085242 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttcttgaggccgcttccaacctatatagat |
23085315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 409
Target Start/End: Original strand, 23085527 - 23085612
Alignment:
| Q |
324 |
aggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgagt |
409 |
Q |
| |
|
||||||||| | ||||||||| | ||||| || |||||||| ||||||||||| || | |||||||| | ||||||||||||||| |
|
|
| T |
23085527 |
aggttattgaagaaccaatccttgcaatcgaaagaaaagaaattagttataaaatcatatggaacaatgtaaagccatacctgagt |
23085612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 5308510 - 5308437
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||| || ||||| ||||| ||||| |
|
|
| T |
5308510 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttctcgaggccgcttccaacctatatagat |
5308437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 23949566 - 23949493
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||| || ||||| ||||| ||||| |
|
|
| T |
23949566 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttctcgaggccgcttccaacctatatagat |
23949493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 50952899 - 50952972
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||| || ||||| ||||| ||||| |
|
|
| T |
50952899 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttctcgaggccgcttccaacctatatagat |
50952972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 23722870 - 23722818
Alignment:
| Q |
324 |
aggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaa |
376 |
Q |
| |
|
||||||||| | ||||||||||| ||||| || |||||||| ||||||||||| |
|
|
| T |
23722870 |
aggttattgaagaaccaatccctgcaatcgaaagaaaagaaattagttataaa |
23722818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 50953184 - 50953236
Alignment:
| Q |
324 |
aggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaa |
376 |
Q |
| |
|
||||||||| | ||||||||||| ||||| || |||||||| ||||||||||| |
|
|
| T |
50953184 |
aggttattgaagaaccaatccctgcaatcgaaagaaaagaaattagttataaa |
50953236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 9 - 412
Target Start/End: Complemental strand, 44145603 - 44145214
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44145603 |
cgaaaaataccaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
44145504 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
44145503 |
agatagtgtccgtcaccttaggccctctatgaaagagctccaagttgtagtcttcaatatctctaacgaatgtttggatta--------------ttcgg |
44145418 |
T |
|
| Q |
209 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtccca |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
44145417 |
cctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataacaacacgtagtcataaaggtggtatgccatctaaatgtgcttgtccca |
44145318 |
T |
|
| Q |
309 |
accatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
408 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44145317 |
accatatttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgag |
44145218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 38560904 - 38560962
Alignment:
| Q |
44 |
atccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatc |
102 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||||||||||||||||||| ||| ||||| |
|
|
| T |
38560904 |
atccttgcaggcaccgtcactgctgagtttgatccaaccttcctgaggttgttaccatc |
38560962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 1635863 - 1635793
Alignment:
| Q |
42 |
atatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagat |
112 |
Q |
| |
|
||||||||||| ||||| || || || ||||||||||||||||| ||||| || ||||| ||||| ||||| |
|
|
| T |
1635863 |
atatccttgcaagcaccatcactattaagcttgatccaaccttcttgaggccgcttccaacctatatagat |
1635793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 409
Target Start/End: Original strand, 26617340 - 26617425
Alignment:
| Q |
324 |
aggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgagt |
409 |
Q |
| |
|
||||||||| | ||||||||| | ||||| || |||||||| ||||||||||| || | ||||| || | ||||||||||||||| |
|
|
| T |
26617340 |
aggttattgaagaaccaatccatgcaatcgaaagaaaagaaattagttataaaatcatatggaacgatgtaaagccatacctgagt |
26617425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 14 - 412
Target Start/End: Complemental strand, 18883273 - 18882875
Alignment:
| Q |
14 |
aatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagata |
113 |
Q |
| |
|
|||| |||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18883273 |
aataccaccacaaccggaaatatgacctagatccttggaggcaccgtcgttgttgagcttgatccaaccttcctgaggtcgtttccatcctatgaagata |
18883174 |
T |
|
| Q |
114 |
gtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcggccttt |
213 |
Q |
| |
|
|| ||| |||||||||||||| |||||| |||||||||||| ||||||||||||||| |||||||| | | || || ||||||||||||||| ||||||| |
|
|
| T |
18883173 |
gtctccttcaccttaggccctatatgaaggtgctccaagttttagtcttcaatatctttaacgaatctctagactaatatatttggattatttggccttt |
18883074 |
T |
|
| Q |
214 |
ggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtcccaaccat |
313 |
Q |
| |
|
||||||| | || ||||||||| |||||| ||||||||||||||||| | || ||||||| ||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
18883073 |
ggaaatcaggtttaaagatagttttgttcttccatttccacaaatactagtacatagtcatgaaggtggtctgtcatctagatgtgctcgtcccaaccat |
18882974 |
T |
|
| Q |
314 |
ttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgagttgc |
412 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| |
|
|
| T |
18882973 |
tttcctcttaaggttattgaaaaaccaatccctacagtcaaaggaaaagaagttagttataaaatcagagggaacaatatgaagccatacctgagttgc |
18882875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 4560615 - 4560769
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| |||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560615 |
cgaaaaataccaccacaattgaaaatatgacccatatccttgcaggcaccatcgctgtcgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
4560714 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttc |
163 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4560715 |
agatagtgtccgccaccttaggccctttatgaaagtgctccaagttgtagtcttc |
4560769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 34081069 - 34081200
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagatagtgtccgtcaccttaggccctctat |
138 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||| || ||||| ||||| ||||| | ||| ||| ||| || || ||| |
|
|
| T |
34081069 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttctcgaggccgcttccaacctatatagatgatttccttcaactttggaccaatat |
34081168 |
T |
|
| Q |
139 |
gaaagtgctccaagttgtagtcttcaatatct |
170 |
Q |
| |
|
||| ||||||||||| | |||||||||||| |
|
|
| T |
34081169 |
gaatatgctccaagttacaatcttcaatatct |
34081200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 47597891 - 47598118
Alignment:
| Q |
9 |
cgaagaatatcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgt |
108 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
47597891 |
cgaaaaataccaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagtttgatccaaccttcttgaggtcgtttccatcctatgt |
47597990 |
T |
|
| Q |
109 |
agatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
208 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47597991 |
agataatgtctgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatatttggattattcgg |
47598090 |
T |
|
| Q |
209 |
cctttggaaatccgcttcaaagatagtc |
236 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
47598091 |
cctttggaaatccgcttcaaagatagtc |
47598118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 34390136 - 34390210
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagata |
113 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||| || ||||| ||||| |||||| |
|
|
| T |
34390136 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttctcgaggccgcttccaacctatatagata |
34390210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 409
Target Start/End: Original strand, 36895032 - 36895117
Alignment:
| Q |
324 |
aggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgagt |
409 |
Q |
| |
|
||||||||| | ||||||||||| ||||| || |||||||| ||||||| ||| || | ||||| || | ||||||||||||||| |
|
|
| T |
36895032 |
aggttattgaagaaccaatccctgcaatcgaaagaaaagaaattagttacaaaatcatatggaacgatgtaaagccatacctgagt |
36895117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 412
Target Start/End: Original strand, 40196893 - 40197090
Alignment:
| Q |
215 |
gaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctagatgtgcttgtcccaaccatt |
314 |
Q |
| |
|
|||||| |||||||| ||||| || |||||||| |||||||| ||||||||| | ||||| || || |||| ||| || | ||| | |||||||| | |
|
|
| T |
40196893 |
gaaatcagcttcaaaaatagttttattcctccacttccacaagtaccaacacatcgtcatgaaagttgtcttccaacttaaagtgttcgtcccaacgtct |
40196992 |
T |
|
| Q |
315 |
tttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgagttgc |
412 |
Q |
| |
|
|| | || ||||||||| | ||||||||||| |||||||| |||||||| ||||||||||| || |||| || || | |||||||||| ||||||| |
|
|
| T |
40196993 |
ttcttgttgaggttattgaagaaccaatccctgcaatcaaaagaaaagaaattagttataaaatcagaagaaaggatgtaaagccatacccgagttgc |
40197090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 412
Target Start/End: Original strand, 26381659 - 26381975
Alignment:
| Q |
96 |
ttccatcctatgtagatagtgtccgtcaccttaggccctctatgaaagtgctccaagttgtagtcttcaatatctctaacgaatgtttggattagtatat |
195 |
Q |
| |
|
|||||||||||||||||||| ||| ||| |||| | || ||||||| || || ||||| |||| ||||||||| | ||||| | || | || || |
|
|
| T |
26381659 |
ttccatcctatgtagatagtttccttcaacttatgaccactatgaagatgttctaagttacagtcctcaatatctttgacgaaacgcttaatcattaaat |
26381758 |
T |
|
| Q |
196 |
ttggattattcggcctttggaaatccgcttcaaagatagtcttgttcctccatttccacaaataccaacacgtagtcataaaggtggtctgccatctaga |
295 |
Q |
| |
|
|||| || || ||||| || |||| |||||||||||||| ||||| || || ||||| | || ||| || || | ||| |||||||| ||||| | || |
|
|
| T |
26381759 |
ttgggttgtttggcctctgaaaattagcttcaaagatagttttgttgcttcacttccatagatgccagcaagttgccatgaaggtggtatgccaattgga |
26381858 |
T |
|
| Q |
296 |
tgtgcttgtcccaaccatttttctcttaaggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatga |
395 |
Q |
| |
|
|||| || |||||| |||||| || ||||||||| ||| |||||||| |||||||| ||||| || ||| ||||||| || ||||||||||||||| |
|
|
| T |
26381859 |
gctgctcgttccaaccccttttctattgaggttattgaaaattcaatccctgcaatcaaaagaaaataaattatttataaaatcagaaggaacaatatga |
26381958 |
T |
|
| Q |
396 |
agccatacctgagttgc |
412 |
Q |
| |
|
| |||||| || ||||| |
|
|
| T |
26381959 |
aaccatacttgggttgc |
26381975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 409
Target Start/End: Original strand, 7305697 - 7305782
Alignment:
| Q |
324 |
aggttattggaaaaccaatccctacaatcaaaggaaaagaagttagttataaagtcggaaggaacaatatgaagccatacctgagt |
409 |
Q |
| |
|
||||||||| | ||||||||||| ||||| || |||||||| ||||||||||| || | ||||| || | ||||||||||||||| |
|
|
| T |
7305697 |
aggttattgaagaaccaatccctgcaatcgaaagaaaagaaattagttataaaatcatatggaacgatgtaaagccatacctgagt |
7305782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 7305413 - 7305465
Alignment:
| Q |
39 |
cccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgagg |
91 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| ||||| |
|
|
| T |
7305413 |
cccatatccttgcaagcaccatcactattaagcttgatccaaccttcttgagg |
7305465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 40196717 - 40196849
Alignment:
| Q |
38 |
acccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctatgtagatagtgtccgtcaccttaggccctcta |
137 |
Q |
| |
|
|||||||| |||||| ||||| | |||||||||||||||||||||| |||| || ||||| ||||| ||||| |||| ||| ||| || || || |
|
|
| T |
40196717 |
acccatattcttgcaagcaccaccattgttgagcttgatccaaccttctcgaggccgcttccaacctatatagatgatgtctttcaactttggaccaata |
40196816 |
T |
|
| Q |
138 |
tgaaagtgctccaagttgtagtcttcaatatct |
170 |
Q |
| |
|
|||| ||||||||||| | |||||||||||| |
|
|
| T |
40196817 |
tgaagatgctccaagttacattcttcaatatct |
40196849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 355794 - 355705
Alignment:
| Q |
17 |
atcaccacaaccggaaatatgacccatatccttgcaggcaccgtcgctgttgagcttgatccaaccttcctgaggtcgtttccatcctat |
106 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||||| ||||| || |||||||||||||| ||||||| || ||| | || |||||||| |
|
|
| T |
355794 |
atcaccacaatccaaaatatgacccctatccttgcatgcaccatcattgttgagcttgatcgaaccttcttgtggttgctttcatcctat |
355705 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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