View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13462_low_1 (Length: 824)
Name: NF13462_low_1
Description: NF13462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13462_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 675; Significance: 0; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 675; E-Value: 0
Query Start/End: Original strand, 10 - 803
Target Start/End: Original strand, 14178263 - 14179057
Alignment:
| Q |
10 |
agcttcaactttgtgccgagttgatcggcatggatcgccggtgaatgaattgcgaggatatctccctttggctggagggggagaattgttggtcccacca |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178263 |
agcttcaactttgtgccgagttgatcggcatggatcgccggtgaatgaattgcgaggatatctccctttggctggagggggagaattgttggtcccacca |
14178362 |
T |
|
| Q |
110 |
cgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcctttcaaatagtttg |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178363 |
cgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcctttcaaatagtttg |
14178462 |
T |
|
| Q |
210 |
gctatgtatagattgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacattaaggacatgactttg |
309 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178463 |
gctatgtataggttgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacattaaggacatgactttg |
14178562 |
T |
|
| Q |
310 |
gtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagaggggtacttgaaggaatgaaatcaatgaagcagaagtgaaaa |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178563 |
gtgtgaaaggagtgcatagcatttaactcttcatcagccgatttcccctataaataaaggggtacttgaaggaatgaaatcaatgaagcagaagtgaaaa |
14178662 |
T |
|
| Q |
410 |
tacaaagtttc--tgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctct |
507 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178663 |
tacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctct |
14178762 |
T |
|
| Q |
508 |
ataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggag |
607 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14178763 |
ataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggag |
14178858 |
T |
|
| Q |
608 |
agaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtg |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
14178859 |
agaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtg |
14178958 |
T |
|
| Q |
708 |
ttca---nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
803 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178959 |
ttcattttttttattgctaccgctgcgctgcaagatccagtctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
14179057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 589; E-Value: 0
Query Start/End: Original strand, 96 - 803
Target Start/End: Original strand, 14173595 - 14174303
Alignment:
| Q |
96 |
tgttggtcccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcc |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173595 |
tgttggtcccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcc |
14173694 |
T |
|
| Q |
196 |
tttcaaatagtttggctatgtatagattgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacatta |
295 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173695 |
tttcaaatagtttggctatgtataggttgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacatta |
14173794 |
T |
|
| Q |
296 |
aggacatgactttggtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagaggggtacttgaaggaatgaaatcaatga |
395 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173795 |
aggacatgactttggtgtgaaaggagggcatagcatttaactcttcatcagccgatttcccctataaatagaggggtacttgaaggaatgaaatcaatga |
14173894 |
T |
|
| Q |
396 |
agcagaagtgaaaatacaaagtttc--tgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccggg |
493 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173895 |
agcagaagtgaaaatacaaagtttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccggg |
14173994 |
T |
|
| Q |
494 |
tgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnn |
593 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173995 |
tgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctct----tgtgtgt |
14174090 |
T |
|
| Q |
594 |
nnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccac |
693 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14174091 |
gtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccac |
14174190 |
T |
|
| Q |
694 |
gttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcg |
790 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174191 |
gttaaatattggtgttcattttttttatcactaccgctgcgctgcaagatccagtctcttttggattttggaattttaatttacacttgcgttaagctcg |
14174290 |
T |
|
| Q |
791 |
tcgagcccaacaa |
803 |
Q |
| |
|
||||||||||||| |
|
|
| T |
14174291 |
tcgagcccaacaa |
14174303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 96 - 802
Target Start/End: Original strand, 44161245 - 44161949
Alignment:
| Q |
96 |
tgttggtcccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcc |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161245 |
tgttggtcccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcc |
44161344 |
T |
|
| Q |
196 |
tttcaaatagtttggctatgtatagattgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacatta |
295 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161345 |
tttcaaatagtttggctatgtataggttgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacatta |
44161444 |
T |
|
| Q |
296 |
aggacatgactttggtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagaggggtacttgaaggaatgaaatcaatga |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
44161445 |
aggacatgactttggtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagaggggtacttgaaggaatgaaggcatcga |
44161544 |
T |
|
| Q |
396 |
agcagaagtg-aaaatacaaagtttctgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgggt |
494 |
Q |
| |
|
|||||||||| |||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161545 |
agcagaagtgaaaaacacaaagcttctgtgtgtagaggtgtgtgagaggaataatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgggt |
44161644 |
T |
|
| Q |
495 |
gggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnn |
594 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
44161645 |
gggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtcttacgggaaacactatattgtatctct----tgtgtgtg |
44161740 |
T |
|
| Q |
595 |
nnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacg |
694 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
44161741 |
taagagagtggagaga--attgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacg |
44161838 |
T |
|
| Q |
695 |
ttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgt |
791 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161839 |
ttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgt |
44161938 |
T |
|
| Q |
792 |
cgagcccaaca |
802 |
Q |
| |
|
||||||||||| |
|
|
| T |
44161939 |
cgagcccaaca |
44161949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 394 - 803
Target Start/End: Complemental strand, 28611977 - 28611567
Alignment:
| Q |
394 |
gaagcagaagtgaaaatacaaagtttctgtgtgt--agaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccg |
491 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611977 |
gaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccg |
28611878 |
T |
|
| Q |
492 |
ggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnn |
591 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611877 |
ggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctct----tgtgt |
28611782 |
T |
|
| Q |
592 |
nnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttcc |
691 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
28611781 |
gtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggtttttc |
28611682 |
T |
|
| Q |
692 |
acgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagct |
788 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611681 |
acgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaattttaatttacacttgcgttaagct |
28611582 |
T |
|
| Q |
789 |
cgtcgagcccaacaa |
803 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
28611581 |
cgtcgagcccaacaa |
28611567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 394 - 806
Target Start/End: Complemental strand, 28607215 - 28606802
Alignment:
| Q |
394 |
gaagcagaagtgaaaatacaaagtttctgtgtgt--agaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccg |
491 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607215 |
gaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccg |
28607116 |
T |
|
| Q |
492 |
ggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnn |
591 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607115 |
ggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctct----tgtgt |
28607020 |
T |
|
| Q |
592 |
nnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttcc |
691 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
28607019 |
gtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggtttttc |
28606920 |
T |
|
| Q |
692 |
acgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagct |
788 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606919 |
acgttaaatattggtgttaattttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaattttaatttacacttgcgttaagct |
28606820 |
T |
|
| Q |
789 |
cgtcgagcccaacaatat |
806 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
28606819 |
cgtcgagcccaacaatat |
28606802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 393 - 802
Target Start/End: Original strand, 11104427 - 11104829
Alignment:
| Q |
393 |
tgaagcagaagtgaaaatacaaagtttctgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgg |
492 |
Q |
| |
|
|||||||||||| ||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11104427 |
tgaagcagaagtcaaa-tacaaagcttctatgtgtagaagtgtgtgagagaaaaaatagagtgttgagtaaatccagagagtgtaggaaaaatacaccgg |
11104525 |
T |
|
| Q |
493 |
gtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnn |
592 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11104526 |
gtggatatcatctctataacttctaggtgttataaaataatagcatttgaataggagtgggtctcacgggaaacactatattgtatctct-----ttgtg |
11104620 |
T |
|
| Q |
593 |
nnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttcca |
692 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||| | |
|
|
| T |
11104621 |
tgtaagagagtggagagaatattgtaatattcttagatatggtggaatatttttcggagtttgtcccgtgg-tttaccctcgatattagaggattttcta |
11104719 |
T |
|
| Q |
693 |
cgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtc |
792 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11104720 |
tgttaaatattggtgttcatttttatcgctacagctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtc |
11104819 |
T |
|
| Q |
793 |
gagcccaaca |
802 |
Q |
| |
|
|||||||||| |
|
|
| T |
11104820 |
gagcccaaca |
11104829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 498 - 804
Target Start/End: Complemental strand, 48827000 - 48826700
Alignment:
| Q |
498 |
tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnna |
597 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
48827000 |
tatcatctctataacttctaggtgctataaaataatagcattcaaataggagtgaatctcacgggaaacactatattgtatctcttgtgtgtgta----a |
48826905 |
T |
|
| Q |
598 |
gagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtta |
697 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| |
|
|
| T |
48826904 |
gagagcgaagagaatattgtaatattctttaatatagtggaatatttttcggag-ttgtcccgtgatttttccctcggtattagaggattttccacgtta |
48826806 |
T |
|
| Q |
698 |
aatattggtgttc-annnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagc |
796 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| | |
|
|
| T |
48826805 |
aatattggtgttctttttctatcgctaccgctgcgctgcaagatccaatctc--ttgaattttgaaattttaatttacaattgcgttaagctcgtcgatc |
48826708 |
T |
|
| Q |
797 |
ccaacaat |
804 |
Q |
| |
|
|||||||| |
|
|
| T |
48826707 |
ccaacaat |
48826700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 28607610 - 28607507
Alignment:
| Q |
10 |
agcttcaactttgtgccgagttgatcggcatggatcgccggtgaatgaattgcgaggatatctccctttggctggagggggagaattgttggtcccacca |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28607610 |
agcttcaactttgtgccgagttgttcggcatggatcgcaggtgaatgaattgcgatgatatctccctttggctggagggggagaattgttggccccacca |
28607511 |
T |
|
| Q |
110 |
cgtg |
113 |
Q |
| |
|
|||| |
|
|
| T |
28607510 |
cgtg |
28607507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 605 - 775
Target Start/End: Complemental strand, 48708256 - 48708086
Alignment:
| Q |
605 |
gagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattg |
704 |
Q |
| |
|
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||| || ||||||| || ||||| || ||||||||||| |
|
|
| T |
48708256 |
gagagaatattgtaatattttttaatataatgaaatattttttggagtttgtcacgtggtttttctcttagtattatagagtttttcatgttaaatattg |
48708157 |
T |
|
| Q |
705 |
gtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttaca |
775 |
Q |
| |
|
|| || | || ||| ||||| || ||||| |||| |||||| ||||||||||||||||||||| |
|
|
| T |
48708156 |
gtatttaattttatcgccaccactgcgttgtaagattcaatttcttttatattttggaattttaatttaca |
48708086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 597 - 690
Target Start/End: Complemental strand, 24726381 - 24726288
Alignment:
| Q |
597 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
690 |
Q |
| |
|
||||| ||||||||||||| | || |||||||||||| ||||||||||||| ||||||||| ||||| |||||||| ||||||| ||||||| |
|
|
| T |
24726381 |
agagaatggagagaatattattatgttctttaatataatggaatatttttcagagtttgtctcgtggcttttcccttgatattagatggttttc |
24726288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 456
Target Start/End: Complemental strand, 24726634 - 24726535
Alignment:
| Q |
357 |
ctataaatagaggggtacttgaaggaatgaaatcaatgaagcagaagtgaaaatacaaagtttctgtgtgtagaagtgtgtgagaggaaaaatagagtgt |
456 |
Q |
| |
|
|||||||| |||||||| ||||||||| |||| || ||| |||||| |||||||||| |||||| ||||||||||| ||| | ||| ||||||||| |
|
|
| T |
24726634 |
ctataaattgaggggtatttgaaggaaggaaagcatctaagaagaagttgaaatacaaagcttctgtctgtagaagtgtatgaatgaaaagatagagtgt |
24726535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 422; Significance: 0; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 96 - 803
Target Start/End: Original strand, 15289895 - 15290595
Alignment:
| Q |
96 |
tgttggtcccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcc |
195 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
15289895 |
tgttggtcccaccatgtgggacatgttccagccaaaaggaaaattgcaacaagcaattgtcaaagtcttctacacattaaatgcatggcttagtttttcc |
15289994 |
T |
|
| Q |
196 |
tttcaaatagtttggctatgtatagattgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacatta |
295 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15289995 |
tttcaaatagtttggctatgtataggttgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacattg |
15290094 |
T |
|
| Q |
296 |
aggacatgactttggtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagaggggtacttgaaggaatgaaatcaatga |
395 |
Q |
| |
|
| ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| || | |
|
|
| T |
15290095 |
aagacatgactttggtgtgaaagaaatgcatagcatttaactcttcatcaactgatttcctctataaatagaggggtacttgaaggaatgaaagcatcgt |
15290194 |
T |
|
| Q |
396 |
agcagaagtgaaaatac---aaagtttctgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgg |
492 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||||||| |
|
|
| T |
15290195 |
agcagaagtgaaaatacaaaaaagcttctgtgtgtagaagtgtgtgag------aatagagtgttgactaaatccagaaagtgt-ggaaaaatacaccgg |
15290287 |
T |
|
| Q |
493 |
gtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnn |
592 |
Q |
| |
|
|||||||||||||||||||||||||||||| | | ||||||||||| |||||| ||| |||||||| |||||||||||||||||||||| |
|
|
| T |
15290288 |
gtgggtatcatctctataacttctaggtgc--tgaaataatagcattcgaataggagtgggtctcac-ggaaacactatattgtatctct----tgtgtg |
15290380 |
T |
|
| Q |
593 |
nnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttcca |
692 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| || ||| ||||||||||||||||||| | |||| |||||||||||||||||| |
|
|
| T |
15290381 |
tgtaagagagtggagagaatattgtaatattcttaaatatagtggaaaatcttttggagtttgtcccgtggtttatacctcggtattagagggttttcca |
15290480 |
T |
|
| Q |
693 |
cgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc-ttttggattttggaattttaatttacacttgcgttaagct |
788 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
15290481 |
cgttaaatattggtgttcattttttttatcgctaaggctgcgctgcaagatccaatctctttttggattttgaaattttaatttacaattgcgttaagct |
15290580 |
T |
|
| Q |
789 |
cgtcgagcccaacaa |
803 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
15290581 |
cgtcgagcccaacaa |
15290595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 393 - 802
Target Start/End: Complemental strand, 37040836 - 37040426
Alignment:
| Q |
393 |
tgaagcagaagtgaaaatacaaagtttctgtgtgt--agaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
490 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
37040836 |
tgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacatc |
37040737 |
T |
|
| Q |
491 |
gggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnn |
590 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
37040736 |
gggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacggaaaacactatattgtatctct----tgtg |
37040641 |
T |
|
| Q |
591 |
nnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
690 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37040640 |
tgtgtgagagagtggagaaaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
37040541 |
T |
|
| Q |
691 |
cacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagc |
787 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040540 |
cacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtcttttttggattttggaattttaatttacacttgcgttaagc |
37040441 |
T |
|
| Q |
788 |
tcgtcgagcccaaca |
802 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
37040440 |
tcgtcgagcccaaca |
37040426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 96 - 452
Target Start/End: Original strand, 15302602 - 15302960
Alignment:
| Q |
96 |
tgttggtcccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaaatgcatggcttagtttttcc |
195 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
15302602 |
tgttggtcccaccatgtggggcatgttccagccaaaaggaaaatcgcaacaagcaattgtcaaagtcttctacacattaaatgcatggcttagattttcc |
15302701 |
T |
|
| Q |
196 |
tttcaaatagtttggctatgtatagattgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatatagttttcacacatta |
295 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15302702 |
tttcaaatagtttggctatgtataggttgtgcagagaacacacatagcttgcagtggagcagtttgaaagcatgacataaaatatagttttcacacattg |
15302801 |
T |
|
| Q |
296 |
aggacatgactttggtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagaggggtacttgaaggaatgaaatcaatga |
395 |
Q |
| |
|
| ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| || || |
|
|
| T |
15302802 |
aagacatgactttcgtgtgaaaggagtccatagcatttaactcttcatcaactgatttcctctataaatagaggggtacttgaaggaatgaaagcatcga |
15302901 |
T |
|
| Q |
396 |
agcagaagtgaaaatacaaagtttc--tgtgtgtagaagtgtgtgagaggaaaaataga |
452 |
Q |
| |
|
||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
15302902 |
agcagaattgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagagcaaaaataga |
15302960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 393 - 802
Target Start/End: Original strand, 12098960 - 12099361
Alignment:
| Q |
393 |
tgaagcagaagtgaaaatacaaagtttctgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgg |
492 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||| | | | |||||| | | |
|
|
| T |
12098960 |
tgaagtagaagtgaaactacaaagtttttgtgtgtagaagtatgtgaaaggaaaaatagagtgttgagtaaattcagag--tctcg--aaaatagattga |
12099055 |
T |
|
| Q |
493 |
gtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnn |
592 |
Q |
| |
|
||| |||||||||||||||||| |||||| ||||| |||||| |||| |||||| ||| ||||||| ||||||| ||||||| ||||| |
|
|
| T |
12099056 |
gtgagtatcatctctataacttttaggtgttataaaataatatcatttgaataggagtgagtctcactagaaacacaatattgtgtctcttgtgcgtgta |
12099155 |
T |
|
| Q |
593 |
nnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttcca |
692 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| || ||||||||||||| || |
|
|
| T |
12099156 |
----agagagtggagagaatattgtaatattctttaatatagttgaaattttttcggagtttgtcccttggtttttccttcgtcattagagggtttttca |
12099251 |
T |
|
| Q |
693 |
cgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtc |
792 |
Q |
| |
|
||| |||||||| | |||| |||| || || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
12099252 |
cgtaaaatattgcttttcatttttatcgctatcggtgagctgcaagatcatatctcttttggattttggaattttaatttacactcgcgttaaactcgtc |
12099351 |
T |
|
| Q |
793 |
gagcccaaca |
802 |
Q |
| |
|
|||||||||| |
|
|
| T |
12099352 |
gagcccaaca |
12099361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 393 - 654
Target Start/End: Original strand, 12081973 - 12082227
Alignment:
| Q |
393 |
tgaagcagaagtgaaaatacaaagtttctgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgg |
492 |
Q |
| |
|
||||||| ||||||| ||||||||||| | ||||||||||||||||| ||||| |||||||||| ||||||||||| | | |||||||||| | ||| |
|
|
| T |
12081973 |
tgaagcataagtgaagatacaaagttttt-tgtgtagaagtgtgtgatcagaaaattagagtgttgggtaaatccagaaaaag-gggaaaaatatatcgg |
12082070 |
T |
|
| Q |
493 |
gtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnn |
592 |
Q |
| |
|
|| ||||| |||||||||||||||||| ||||||| |||||| |||| |||||| || |||||| ||||||||||||||||||||| |
|
|
| T |
12082071 |
gtaggtattatctctataacttctaggcgctataaaataataacatttgaataggagcgagtctcattagaaacactatattgtatctct----tttccg |
12082166 |
T |
|
| Q |
593 |
nnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagttt |
654 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12082167 |
tgtaagagagtggagaaaatattgtaatattc-ttaatatagtggaatattttttggagttt |
12082227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 720 - 802
Target Start/End: Original strand, 12084669 - 12084751
Alignment:
| Q |
720 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
802 |
Q |
| |
|
||||||| |||||| ||||||||||| ||| |||||||||| ||||||||||||| || | ||||||||||| |||||||||| |
|
|
| T |
12084669 |
gctaccgttgcgctacaagatccaatgtctattggattttgaaattttaatttaccctcgtgttaagctcgttgagcccaaca |
12084751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 597 - 709
Target Start/End: Complemental strand, 2757418 - 2757307
Alignment:
| Q |
597 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtt |
696 |
Q |
| |
|
||||||||||||||||| || |||||| || |||||||||||||| ||||| | |||||| | |||||||||| | || |||| |||| ||| || || |
|
|
| T |
2757418 |
agagagtggagagaatagtgcaatatttttaaatatagtggaata-ttttcaaaatttgtctcatggtttttccttaagcattaaaggggttttcatatt |
2757320 |
T |
|
| Q |
697 |
aaatattggtgtt |
709 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2757319 |
aaatattggtgtt |
2757307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 37041128 - 37041079
Alignment:
| Q |
103 |
cccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaatt |
153 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
37041128 |
cccaccacgtggggtatgttccagcc-aaaggaaaaatgcatgaagcaatt |
37041079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 742 - 779
Target Start/End: Complemental strand, 2757273 - 2757236
Alignment:
| Q |
742 |
caatctcttttggattttggaattttaatttacacttg |
779 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
2757273 |
caatttcttttgaattttggaattttaatttacacttg |
2757236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 398; Significance: 0; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 172 - 802
Target Start/End: Complemental strand, 29107505 - 29106878
Alignment:
| Q |
172 |
ttaaatgcatggcttagtttttcctttcaaatagtttggctatgtatagattgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgac |
271 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||| |||||| |
|
|
| T |
29107505 |
ttaaatgcatggcttagtttttcctttcaaatagtttggctatgtataggttgttcagagaacacacatagcttgtggtgaagcagtttgaaaacatgac |
29107406 |
T |
|
| Q |
272 |
ataaaatatag-ttttcacacattaaggacatgactttggtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagaggg |
370 |
Q |
| |
|
||||||||||| |||||||||||| ||||||| ||||||| || |||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||| |
|
|
| T |
29107405 |
ataaaatatagtttttcacacattgaggacataactttggcgtaaaaggagtgcatagcatttaactcatcatcaactgatttcctctataaataaaggg |
29107306 |
T |
|
| Q |
371 |
gtacttgaaggaatgaaatcaatgaagcagaagtgaaaatacaaag--tttctgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatcca |
468 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| |||||||||| | ||||| |||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
29107305 |
gtacttgaaggaatgaaagcatcgaagcagaagtggaaatacaaagcttctctgtatgtagaagtgtgtgagagaaaaaat--agtgttgagtaaatcca |
29107208 |
T |
|
| Q |
469 |
gagagtgtgggaaaaatacaccgggt-gggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaaca |
567 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107207 |
gagagtgtgggaaaaatacattgggtggggtatcatctttataacttctaggtgctaaaaaataatagcattagaatagaagtaggtctcacgggaaaca |
29107108 |
T |
|
| Q |
568 |
ctatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
667 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107107 |
ctat-ttgtatctct----tgtgtgtgtaagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
29107013 |
T |
|
| Q |
668 |
tccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaatttt |
767 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29107012 |
tccctcggtattagagggttttccacgttaaatattggtgttcatttttaacgctaccgctgcgctgcaagatccaatcttttttggattttggaatttt |
29106913 |
T |
|
| Q |
768 |
aatttacacttgcgttaagctcgtcgagcccaaca |
802 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
29106912 |
aatttacacttgcattaagctcctcgatcccaaca |
29106878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 280 - 803
Target Start/End: Complemental strand, 42911513 - 42910992
Alignment:
| Q |
280 |
tagttttcacacattaaggacatgactttggtgtgaaaggagtgcatagcatttaactcttcatcagctgatttcccctataaatagag-gggtacttga |
378 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||| |
|
|
| T |
42911513 |
tagttttcacacattaaggacatgactttggtgtgaaaggagtgcatagcatttaactctt-ataagctgatttcctctataaatagagagggtacttga |
42911415 |
T |
|
| Q |
379 |
aggaatgaaatcaatgaagcagaagtgaaaat-acaaagtttctgtgtgt--agaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtg |
475 |
Q |
| |
|
|||||||||| || |||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
42911414 |
aggaatgaaagcatcgaagcagaagtgaaaaacacaaagcttctgtgtgtgtagaagtgtgtgagagaaaaaatagagtgttgagtaaatccagagagtg |
42911315 |
T |
|
| Q |
476 |
tgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattg |
575 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
42911314 |
tggaaaaaatacactgggtgggtatcatctctataacttcttggtgctataaaataatagcattagaatagaagtaggtctcaagggaaacactatattg |
42911215 |
T |
|
| Q |
576 |
tatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcag |
675 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
42911214 |
tatcttt----tgtgtgtgtgagagagtggagagaatattgtaatattcttaaatatagtggaata-ttttcggagtttgtcccgtggtttttccctcgg |
42911120 |
T |
|
| Q |
676 |
tattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttaca |
775 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||| ||||||||||| || |
|
|
| T |
42911119 |
tattagagggttttccatgttaaatattggtgttcatttttatcgttgccgctgcgctgcaagatctaatctcttttggattttaaaattttaatttcca |
42911020 |
T |
|
| Q |
776 |
cttgcgttaagctcgtcgagcccaacaa |
803 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
42911019 |
cttgcgttaagctcgtcgagcccaacaa |
42910992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 96 - 281
Target Start/End: Complemental strand, 42911978 - 42911787
Alignment:
| Q |
96 |
tgttggtcccaccacgtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaattcttctacacattaa------atgcatggcttagt |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
42911978 |
tgttggtcccaccacgtggggtatgttccagctaaaaggaaaattgcaacaaacaattgtcaaagtcttctacacattaaccgtaaatgcatggcttagt |
42911879 |
T |
|
| Q |
190 |
ttttcctttcaaatagtttggctatgtatagattgtgcagagaacacacatagcttgcggtggagcagtttgaaagcatgacataaaatata |
281 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
42911878 |
ttttcttttcaaatagtttggctatgtataggatgtgcagagaacacacatagcttgcgatggagcagtttgaaagcatgacataaaatata |
42911787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 620 - 710
Target Start/End: Complemental strand, 38997320 - 38997230
Alignment:
| Q |
620 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttc |
710 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| ||||||| || ||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
38997320 |
tattctttaatataatggattattttttggagtttgtcccgtagtttttcgttcgatattagagggttttcgacgtaaaatattgctgttc |
38997230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 722 - 803
Target Start/End: Complemental strand, 38994779 - 38994698
Alignment:
| Q |
722 |
taccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
803 |
Q |
| |
|
||||||||| |||||||||||||| | ||||| |||||||||||||||||||||| || ||||| ||||| |||||||||| |
|
|
| T |
38994779 |
taccgctgcactgcaagatccaattttgtttgggttttggaattttaatttacactagcattaagatcgtcaagcccaacaa |
38994698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 33811268 - 33811298
Alignment:
| Q |
72 |
tccctttggctggagggggagaattgttggt |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
33811268 |
tccctttggctggagggggagaattgttggt |
33811298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 33816186 - 33816216
Alignment:
| Q |
72 |
tccctttggctggagggggagaattgttggt |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
33816186 |
tccctttggctggagggggagaattgttggt |
33816216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 302; Significance: 1e-169; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 393 - 803
Target Start/End: Original strand, 12930631 - 12931041
Alignment:
| Q |
393 |
tgaagcagaagtgaaaatacaaagtttctgtg--tgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
490 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930631 |
tgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
12930730 |
T |
|
| Q |
491 |
gggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnn |
590 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930731 |
gggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaacactatattgtatctct----tgtg |
12930826 |
T |
|
| Q |
591 |
nnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
690 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12930827 |
tgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
12930926 |
T |
|
| Q |
691 |
cacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagct |
788 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930927 |
cacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaattttaatttacacttgcgttaagct |
12931026 |
T |
|
| Q |
789 |
cgtcgagcccaacaa |
803 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12931027 |
cgtcgagcccaacaa |
12931041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 393 - 802
Target Start/End: Original strand, 12935377 - 12935786
Alignment:
| Q |
393 |
tgaagcagaagtgaaaatacaaagtttctgtg--tgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
490 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935377 |
tgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
12935476 |
T |
|
| Q |
491 |
gggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnn |
590 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935477 |
gggtgggtatcatctctataacttctaggtgctataaaataatagcattagagtaaaagtaggtctcacgggaaacactatattgtatctct----tgtg |
12935572 |
T |
|
| Q |
591 |
nnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
690 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12935573 |
tgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
12935672 |
T |
|
| Q |
691 |
cacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagct |
788 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
12935673 |
cacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtttcttttgaattttggaattttaatttacacttgcgttaagct |
12935772 |
T |
|
| Q |
789 |
cgtcgagcccaaca |
802 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
12935773 |
cgtcgagcccaaca |
12935786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 12934993 - 12935141
Alignment:
| Q |
10 |
agcttcaactttgtgccgagttgatcggcatggatcgccggtgaatgaattgcgaggatatctccctttggctggagggggagaattgttggtcccacca |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
12934993 |
agcttcaactttgtgccgagttgatcggcatggatcgcaagtgaatgaattgcgagaatatctccctttggctggagggggagaattgttggccccacca |
12935092 |
T |
|
| Q |
110 |
c--gtggggtatgttccagccaaaaggaaaattgcaacaagcaattgtcaaa |
159 |
Q |
| |
|
| ||||| |||| |||||||||| || |||||| ||||||||||| |||| |
|
|
| T |
12935093 |
cgtgtgggttatg-tccagccaaa--gacaattgctacaagcaattgccaaa |
12935141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 667
Target Start/End: Complemental strand, 26505055 - 26504985
Alignment:
| Q |
597 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
667 |
Q |
| |
|
||||||| || |||||||||||||||| |||| |||||| |||||||||| ||||||||| | |||||||| |
|
|
| T |
26505055 |
agagagttgaaagaatattgtaatattttttattatagttgaatattttttggagtttgtactgtggtttt |
26504985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 711
Target Start/End: Original strand, 15588948 - 15589060
Alignment:
| Q |
599 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaa |
698 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| ||| |||| ||||||||| ||||||||| | || |||||| |||| || ||||||||||| || ||| |
|
|
| T |
15588948 |
agagtggagaaaatgttgtaatattgtttgataaagtgaaatattttttagagtttgtcacttgatttttctctcattaatagagggtttttcaaaataa |
15589047 |
T |
|
| Q |
699 |
atattggtgttca |
711 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15589048 |
atattgatgttca |
15589060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 749 - 794
Target Start/End: Complemental strand, 26504895 - 26504850
Alignment:
| Q |
749 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcga |
794 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | |||| |||||||| |
|
|
| T |
26504895 |
ttttggattttgaaattttaatttacacttccattaaactcgtcga |
26504850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 393 - 802
Target Start/End: Original strand, 34907094 - 34907503
Alignment:
| Q |
393 |
tgaagcagaagtgaaaatacaaagtttctgtg--tgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
490 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907094 |
tgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
34907193 |
T |
|
| Q |
491 |
gggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnn |
590 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907194 |
gggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaacactatattgtatctct----tgtg |
34907289 |
T |
|
| Q |
591 |
nnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
690 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34907290 |
tgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
34907389 |
T |
|
| Q |
691 |
cacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagct |
788 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907390 |
cacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaattttaatttacacttgcgttaagct |
34907489 |
T |
|
| Q |
789 |
cgtcgagcccaaca |
802 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
34907490 |
cgtcgagcccaaca |
34907503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 394 - 806
Target Start/End: Original strand, 8539139 - 8539552
Alignment:
| Q |
394 |
gaagcagaagtgaaaatacaaagtttctgtg--tgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccg |
491 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| || |
|
|
| T |
8539139 |
gaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatatagtgttcagtaaattcagagagtgtgggaaaaatacatcg |
8539238 |
T |
|
| Q |
492 |
ggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacact---atattgtatctctnnnnnn |
588 |
Q |
| |
|
| ||||||||||||||||||||| |||||||| ||| ||||||||| | |||||| ||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
8539239 |
gatgggtatcatctctataacttttaggtgctgtaaaataatagcaatcgaataggagtgggtctcac-ggaaacactataatattgtatctct----tg |
8539333 |
T |
|
| Q |
589 |
nnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttt |
688 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
8539334 |
tgtgtgtaagagagtggagataatattgtaatattcttaaatatagtggaatatctttcggagtttgtcccgtgatttttccctcggtattagagggttt |
8539433 |
T |
|
| Q |
689 |
tccacgttaaatattggtgttca-nnnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagc |
787 |
Q |
| |
|
|||||||||||||||| |||||| | ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
8539434 |
tccacgttaaatattgatgttcattttttattgttaccgctgcgctgcaagatccaatctcttttagaatttggaattttaatttacacttgcgttaagc |
8539533 |
T |
|
| Q |
788 |
tcgtcgagcccaacaatat |
806 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8539534 |
tcgtcgagcccaacaatat |
8539552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 126; Significance: 2e-64; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 395 - 581
Target Start/End: Original strand, 51302118 - 51302306
Alignment:
| Q |
395 |
aagcagaagtgaaaatacaaagtttctgtg--tgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgg |
492 |
Q |
| |
|
||||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51302118 |
aagcataagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgtgaggaaaaatagagtattgagtaaatccagagagtgtggataaaatacaccgg |
51302217 |
T |
|
| Q |
493 |
gtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctc |
581 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | ||| ||||| |||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
51302218 |
gtgggaatcatctctataacttctaggtgctataaaacaattgcattcgaataggagtgggtctcacgggaaacactatattgtatctc |
51302306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 720 - 803
Target Start/End: Original strand, 51302937 - 51303020
Alignment:
| Q |
720 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
803 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
51302937 |
gctaccgctgcgctgcaagatccaatctgttttggattttgaaattttaatttacacttgcattaagctcgtcgatcccaacaa |
51303020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 711
Target Start/End: Original strand, 51302308 - 51302344
Alignment:
| Q |
675 |
gtattagagggttttccacgttaaatattggtgttca |
711 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302308 |
gtattagagggttttccacgttaaatattggtgttca |
51302344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 620 - 802
Target Start/End: Complemental strand, 2100379 - 2100199
Alignment:
| Q |
620 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnn |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
2100379 |
tattctttaatatagtggaatatttttcggagtttgcccc---gtttttcgctcattattaaagggttttccaccttaaatattgatgttcaattttatc |
2100283 |
T |
|
| Q |
720 |
gctaccgctgcgctgcaaga-tccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
802 |
Q |
| |
|
|| || || ||||||| | || |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2100282 |
attatcgttgtgctgcaaaattcaaatctcttatgaattttggaattttaatttacacttgtgttaagctcgtcgagcccaaca |
2100199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 627
Target Start/End: Complemental strand, 2100753 - 2100723
Alignment:
| Q |
597 |
agagagtggagagaatattgtaatattcttt |
627 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2100753 |
agagagtggagagaatattgtaatattcttt |
2100723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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