View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13465_low_5 (Length: 272)
Name: NF13465_low_5
Description: NF13465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13465_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 43815680 - 43815426
Alignment:
| Q |
1 |
tggttactgaaattgtttgtgggaaaaataacggtgtttttccacaaggttcaaatttggtactccataatgtaagatttacactcactcaagccttaaa |
100 |
Q |
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| T |
43815680 |
tggttactgaaattgtttgtgggaaaaataacggtgtttttccacaaggttcaaatttggtactccataatgtaagatttacactcactcaagccttaaa |
43815581 |
T |
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| Q |
101 |
taacggtgttttgtcattaatgaattttgttagcagctaataaaatgttcatgtcatcacttgatcaggtatggaagaattacaaggcaaacaatatcac |
200 |
Q |
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| T |
43815580 |
taacggtgttttgtcgttaatgaattttgttagcagctaataaaatgttcatgtcatcacttgatcaggtatggaagaattacaaggcaaacaatatcac |
43815481 |
T |
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| Q |
201 |
aacatcaattgatcctgctcttcatggaaaatttgaggtagaagaagcatcaaat |
255 |
Q |
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| T |
43815480 |
aacatcaattgatcctgctcttcatggaaaatttgaggtagaagaagcatcaaat |
43815426 |
T |
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