View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13466_high_6 (Length: 201)
Name: NF13466_high_6
Description: NF13466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13466_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 6897446 - 6897282
Alignment:
| Q |
17 |
aatatgtaacacaactaaaaattaccatagccatcatgatttttctttaaaatttaaaacaaaaaagagtttgtgcatgtgagtttaaaaatttgcaata |
116 |
Q |
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| T |
6897446 |
aatatgtgacacaactaaaaattaccatagccaacatgatttttctttaaaatttaaaacaaaaaagagtttgtgcatgtgagtttaaaaatttgcaata |
6897347 |
T |
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| Q |
117 |
caaaactgtatacaacatcctcattgtacaccagcctaannnnnnnaaacttcaaccatcataat |
181 |
Q |
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| T |
6897346 |
caaaactgtatacaacatcctcattgtacaccagcctaatttttttaaacttcaaacatcataat |
6897282 |
T |
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