View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13466_low_2 (Length: 583)

Name: NF13466_low_2
Description: NF13466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13466_low_2
NF13466_low_2
[»] chr5 (25 HSPs)
chr5 (292-475)||(7035932-7036114)
chr5 (75-226)||(7035727-7035878)
chr5 (353-444)||(38597563-38597654)
chr5 (353-442)||(11977171-11977260)
chr5 (370-446)||(38007140-38007216)
chr5 (363-445)||(26825204-26825286)
chr5 (363-446)||(13007004-13007087)
chr5 (363-446)||(25979933-25980016)
chr5 (365-446)||(31391987-31392068)
chr5 (366-446)||(6012368-6012448)
chr5 (363-446)||(9113955-9114038)
chr5 (364-446)||(7929975-7930053)
chr5 (363-424)||(15571261-15571322)
chr5 (374-446)||(26878308-26878380)
chr5 (353-444)||(24230018-24230110)
chr5 (363-442)||(4770913-4770992)
chr5 (368-423)||(13421724-13421779)
chr5 (373-446)||(6216679-6216753)
chr5 (364-444)||(11074131-11074212)
chr5 (353-446)||(28541136-28541229)
chr5 (373-446)||(34945207-34945280)
chr5 (20-64)||(7035651-7035697)
chr5 (353-446)||(39567061-39567154)
chr5 (363-403)||(14726741-14726781)
chr5 (377-445)||(35850574-35850642)
[»] chr8 (26 HSPs)
chr8 (354-446)||(31013799-31013891)
chr8 (354-446)||(8412577-8412669)
chr8 (356-446)||(10377468-10377558)
chr8 (364-446)||(27110692-27110774)
chr8 (361-446)||(45446039-45446124)
chr8 (365-446)||(17693841-17693922)
chr8 (353-444)||(40211536-40211627)
chr8 (364-446)||(25191294-25191376)
chr8 (366-442)||(20553477-20553553)
chr8 (364-424)||(37971074-37971134)
chr8 (365-446)||(3673226-3673307)
chr8 (365-446)||(8980977-8981058)
chr8 (377-446)||(23230436-23230504)
chr8 (366-442)||(20559976-20560052)
chr8 (366-442)||(20571538-20571614)
chr8 (368-444)||(27498565-27498641)
chr8 (363-446)||(7677508-7677591)
chr8 (375-445)||(33214860-33214930)
chr8 (372-446)||(41684220-41684294)
chr8 (373-446)||(15344094-15344167)
chr8 (373-446)||(15433159-15433232)
chr8 (373-446)||(15524463-15524536)
chr8 (363-446)||(8443749-8443831)
chr8 (375-442)||(29937905-29937972)
chr8 (368-426)||(44091994-44092055)
chr8 (373-423)||(36948688-36948738)
[»] chr3 (41 HSPs)
chr3 (356-446)||(45568674-45568764)
chr3 (363-446)||(10232846-10232929)
chr3 (363-446)||(9998242-9998325)
chr3 (363-446)||(21431401-21431484)
chr3 (363-446)||(32701274-32701357)
chr3 (355-446)||(40487093-40487184)
chr3 (358-438)||(47895922-47896002)
chr3 (363-446)||(10108014-10108097)
chr3 (363-446)||(35865163-35865246)
chr3 (363-446)||(48650965-48651048)
chr3 (363-445)||(10229250-10229332)
chr3 (363-446)||(40556487-40556570)
chr3 (363-446)||(43016631-43016714)
chr3 (366-446)||(38545614-38545694)
chr3 (363-446)||(47042282-47042365)
chr3 (363-424)||(43488849-43488910)
chr3 (365-445)||(21534039-21534119)
chr3 (363-446)||(6954926-6955009)
chr3 (360-446)||(7449132-7449217)
chr3 (360-446)||(7457274-7457359)
chr3 (356-446)||(20465197-20465286)
chr3 (370-444)||(26276025-26276099)
chr3 (363-444)||(23800141-23800225)
chr3 (380-440)||(37040575-37040635)
chr3 (367-446)||(33579648-33579727)
chr3 (363-446)||(36461661-36461744)
chr3 (354-412)||(36910919-36910977)
chr3 (370-423)||(9797780-9797833)
chr3 (377-441)||(12050883-12050947)
chr3 (353-446)||(54148757-54148847)
chr3 (368-446)||(629136-629214)
chr3 (355-445)||(953638-953728)
chr3 (353-411)||(20988020-20988078)
chr3 (363-444)||(31272038-31272120)
chr3 (365-446)||(46220456-46220538)
chr3 (368-424)||(29249024-29249080)
chr3 (355-427)||(38142339-38142411)
chr3 (363-423)||(52923368-52923428)
chr3 (373-422)||(9688488-9688537)
chr3 (374-446)||(7546397-7546469)
chr3 (363-411)||(12150047-12150095)
[»] chr2 (32 HSPs)
chr2 (356-446)||(7646251-7646341)
chr2 (356-446)||(1421450-1421540)
chr2 (363-446)||(7448034-7448117)
chr2 (353-446)||(36943354-36943447)
chr2 (353-446)||(43397349-43397442)
chr2 (363-446)||(4778539-4778622)
chr2 (363-446)||(12677526-12677609)
chr2 (363-446)||(27097635-27097718)
chr2 (363-444)||(35220117-35220195)
chr2 (363-446)||(11985460-11985543)
chr2 (368-446)||(9169487-9169565)
chr2 (373-446)||(7678108-7678181)
chr2 (363-444)||(31788242-31788323)
chr2 (363-446)||(4098889-4098972)
chr2 (377-444)||(5428100-5428167)
chr2 (365-446)||(31128978-31129059)
chr2 (374-446)||(18763265-18763337)
chr2 (389-446)||(37876828-37876885)
chr2 (364-442)||(36691653-36691732)
chr2 (364-442)||(13119995-13120073)
chr2 (363-445)||(25509298-25509379)
chr2 (368-446)||(32448851-32448929)
chr2 (357-446)||(20145934-20146023)
chr2 (363-424)||(29279823-29279883)
chr2 (379-419)||(8809084-8809124)
chr2 (358-446)||(12648154-12648242)
chr2 (368-423)||(42698928-42698983)
chr2 (404-446)||(36175671-36175713)
chr2 (392-446)||(38444982-38445036)
chr2 (375-423)||(4042230-4042278)
chr2 (365-413)||(4904399-4904447)
chr2 (376-424)||(39311146-39311194)
[»] chr4 (27 HSPs)
chr4 (365-446)||(2520575-2520656)
chr4 (358-446)||(19853741-19853829)
chr4 (353-446)||(56156783-56156876)
chr4 (363-446)||(13633910-13633993)
chr4 (352-446)||(26633900-26633994)
chr4 (363-446)||(4142984-4143067)
chr4 (362-445)||(21686471-21686554)
chr4 (363-446)||(22610980-22611063)
chr4 (363-446)||(53810824-53810907)
chr4 (357-446)||(5119128-5119217)
chr4 (365-446)||(10496140-10496221)
chr4 (367-446)||(9165273-9165352)
chr4 (363-446)||(9178153-9178236)
chr4 (363-446)||(48257679-48257762)
chr4 (363-446)||(35348102-35348185)
chr4 (356-446)||(24099301-24099391)
chr4 (377-446)||(22558695-22558764)
chr4 (368-424)||(26091165-26091221)
chr4 (368-446)||(54021662-54021740)
chr4 (365-446)||(33920850-33920931)
chr4 (363-424)||(51024713-51024774)
chr4 (363-446)||(22300641-22300724)
chr4 (355-446)||(51888446-51888537)
chr4 (357-441)||(9713691-9713775)
chr4 (356-416)||(29961189-29961249)
chr4 (378-446)||(43510010-43510078)
chr4 (103-166)||(2635056-2635119)
[»] chr7 (21 HSPs)
chr7 (366-446)||(42978389-42978469)
chr7 (353-446)||(9450367-9450460)
chr7 (365-446)||(37837688-37837769)
chr7 (365-446)||(48317042-48317123)
chr7 (354-446)||(13797161-13797253)
chr7 (353-442)||(8013699-8013788)
chr7 (377-446)||(12141538-12141607)
chr7 (361-444)||(30757051-30757134)
chr7 (363-446)||(39171822-39171905)
chr7 (363-445)||(39329024-39329106)
chr7 (365-446)||(19404984-19405065)
chr7 (377-446)||(48061214-48061283)
chr7 (363-446)||(4529857-4529940)
chr7 (358-421)||(25287436-25287499)
chr7 (359-446)||(47590088-47590175)
chr7 (366-423)||(45350445-45350502)
chr7 (363-446)||(19296656-19296739)
chr7 (367-422)||(34899858-34899913)
chr7 (363-424)||(40992960-40993021)
chr7 (389-446)||(24770059-24770116)
chr7 (354-402)||(41554397-41554445)
[»] chr6 (20 HSPs)
chr6 (354-446)||(12170263-12170355)
chr6 (363-446)||(33053398-33053481)
chr6 (363-446)||(32328813-32328896)
chr6 (356-446)||(3913804-3913893)
chr6 (365-445)||(9723609-9723690)
chr6 (363-444)||(68232-68313)
chr6 (365-446)||(605983-606064)
chr6 (359-446)||(23128391-23128478)
chr6 (368-425)||(9721761-9721818)
chr6 (365-425)||(9719643-9719703)
chr6 (389-446)||(29320092-29320149)
chr6 (364-442)||(30894416-30894492)
chr6 (368-446)||(32059691-32059769)
chr6 (363-445)||(32191963-32192044)
chr6 (377-442)||(7515436-7515501)
chr6 (365-446)||(30608742-30608823)
chr6 (356-424)||(29255694-29255762)
chr6 (353-446)||(1523175-1523268)
chr6 (381-446)||(24227942-24228007)
chr6 (376-444)||(31852406-31852474)
[»] chr1 (29 HSPs)
chr1 (363-446)||(34878501-34878584)
chr1 (363-446)||(35484608-35484691)
chr1 (356-444)||(26535172-26535260)
chr1 (363-446)||(3228049-3228132)
chr1 (356-446)||(31983952-31984042)
chr1 (365-446)||(1742062-1742143)
chr1 (365-446)||(45415340-45415421)
chr1 (379-446)||(41176977-41177044)
chr1 (364-442)||(10776694-10776772)
chr1 (364-446)||(15435102-15435184)
chr1 (353-438)||(7337901-7337986)
chr1 (377-446)||(29738866-29738935)
chr1 (363-443)||(51916885-51916965)
chr1 (368-446)||(44915429-44915508)
chr1 (354-444)||(21947850-21947939)
chr1 (365-446)||(14872420-14872501)
chr1 (364-441)||(27456320-27456397)
chr1 (354-446)||(12634937-12635029)
chr1 (373-446)||(18939111-18939184)
chr1 (365-446)||(35462268-35462349)
chr1 (383-446)||(7836996-7837059)
chr1 (391-442)||(8212144-8212195)
chr1 (403-446)||(32394818-32394861)
chr1 (363-446)||(32679329-32679412)
chr1 (375-446)||(49626701-49626772)
chr1 (392-446)||(15836001-15836055)
chr1 (377-446)||(4413097-4413166)
chr1 (365-446)||(45789346-45789427)
chr1 (368-444)||(44543057-44543133)
[»] scaffold0127 (1 HSPs)
scaffold0127 (363-446)||(15268-15351)
[»] scaffold0026 (1 HSPs)
scaffold0026 (363-446)||(72094-72177)
[»] scaffold0017 (1 HSPs)
scaffold0017 (363-446)||(32978-33061)
[»] scaffold0088 (1 HSPs)
scaffold0088 (363-446)||(50562-50645)
[»] scaffold0219 (1 HSPs)
scaffold0219 (363-424)||(15090-15151)
[»] scaffold0445 (1 HSPs)
scaffold0445 (363-446)||(1120-1203)
[»] scaffold0554 (1 HSPs)
scaffold0554 (380-446)||(10672-10738)
[»] scaffold0884 (1 HSPs)
scaffold0884 (377-446)||(2202-2271)
[»] scaffold0064 (1 HSPs)
scaffold0064 (356-441)||(19271-19355)
[»] scaffold0087 (1 HSPs)
scaffold0087 (363-446)||(25559-25642)
[»] scaffold0492 (1 HSPs)
scaffold0492 (392-446)||(12721-12775)
[»] scaffold0262 (1 HSPs)
scaffold0262 (373-423)||(2070-2120)
[»] scaffold0009 (1 HSPs)
scaffold0009 (368-446)||(58309-58387)
[»] scaffold0618 (1 HSPs)
scaffold0618 (368-397)||(7854-7883)
[»] scaffold0154 (1 HSPs)
scaffold0154 (378-446)||(25124-25190)
[»] scaffold0634 (1 HSPs)
scaffold0634 (363-411)||(8290-8338)


Alignment Details
Target: chr5 (Bit Score: 146; Significance: 1e-76; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 292 - 475
Target Start/End: Original strand, 7035932 - 7036114
Alignment:
Q  292 catacatttgtttaaaagtcagttgaataataaatttgagcgttaagtaaatcaattctataatagtcggtcctagttttctagtgagagaaactcaaac 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  7035932 catacatttgtttaaaagtcagttgaataataaatttgagcgttaagtaaatcaattctataatagccggccctagttttctagtgagagaaactcaaac 7036031  T
Q  392 ttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtcannnnnnngacctaaaatcactcatctaca 475  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  7036032 ttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtca-ttttttgacctaaaatcactcatctaca 7036114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 7035727 - 7035878
Alignment:
Q  75 aatcaattctatctgaga-caaccaaacatcaaaaccaattttaagcttccaaattcaattatgggccctctaaaagtgaaaccaaacatacatgagttt 173  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7035727 aatcaattctatttgagaacaaccaaacatcacaaccaattttaagctttcaaattcaattatgggtcctctaaaagtgaaaccaaacatacatgagttt 7035826  T
Q  174 gnnnnnnnnaaatcatatacattattttttaggataatggcttgtttgcgttg 226  Q
    |        || |||||||||||||||||||||||||||||||||||||||||    
T  7035827 g-tttttttaagtcatatacattattttttaggataatggcttgtttgcgttg 7035878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 353 - 444
Target Start/End: Original strand, 38597563 - 38597654
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||    
T  38597563 aatagccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggt 38597654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 11977260 - 11977171
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||  |||||||||||||    
T  11977260 aatagtcggccctagttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttag 11977171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 370 - 446
Target Start/End: Original strand, 38007140 - 38007216
Alignment:
Q  370 ttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  38007140 ttctagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 38007216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 26825204 - 26825286
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    ||||||||||||||| ||||||||| || |||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  26825204 cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtc 26825286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 13007004 - 13007087
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| | |||||||||||||||    
T  13007004 cctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtca 13007087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 25979933 - 25980016
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||| |||  ||||||||| ||||||    
T  25979933 cctagttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtca 25980016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 31392068 - 31391987
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||| ||| || ||||||||| |||||||||||||||| || |||||| ||| |||||||||||||||||    
T  31392068 tagttttctagtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtca 31391987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 366 - 446
Target Start/End: Complemental strand, 6012448 - 6012368
Alignment:
Q  366 agttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||    
T  6012448 agttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtca 6012368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 9114038 - 9113955
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||  ||||||||| ||||||||| ||||||||||||||| ||| |||||| ||| |||||| ||||||||||    
T  9114038 cctagttttctagtaggagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtca 9113955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 7929975 - 7930053
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||    |||||||||| |||||| ||||||||||    
T  7929975 ctagttttctagtgagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtca 7930053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 15571261 - 15571322
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||    
T  15571261 cctagttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatc 15571322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 446
Target Start/End: Complemental strand, 26878380 - 26878308
Alignment:
Q  374 agtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||| ||| | |||||||||| ||||    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca 26878308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 353 - 444
Target Start/End: Complemental strand, 24230110 - 24230018
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgt-aaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||| | ||||||||||| | |||| |||||| ||| | || ||||||||||    
T  24230110 aatagccggccctagttttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggt 24230018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 4770913 - 4770992
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    ||||||||||||  ||||||||||| ||||||||| |||||||||||||| |||| || ||| ||| |||||| ||||||    
T  4770913 cctagttttctaccgagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag 4770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 423
Target Start/End: Original strand, 13421724 - 13421779
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    |||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||    
T  13421724 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat 13421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 6216679 - 6216753
Alignment:
Q  373 tagtgagagaaactcaaa-cttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||| |||||| |||  ||||||||||||||||    
T  6216679 tagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtca 6216753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 444
Target Start/End: Complemental strand, 11074212 - 11074131
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtg-gggtggttttaggt 444  Q
    |||||| ||||  ||||||||||| ||||| ||| |||||||||||||||| || |||||| ||| | ||||||||||||||    
T  11074212 ctagttctctatggagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggt 11074131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 353 - 446
Target Start/End: Complemental strand, 28541229 - 28541136
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| | |||| |||| |||||||||||||||   ||||||| |||  |||||| ||| |||| ||||| |||||||||| ||||||||||    
T  28541229 aatagtctgccctatttttttagtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtca 28541136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 34945207 - 34945280
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||| ||||||||| || |||||| ||||||||||||||||||| |||||| | |  || |||||||||||||    
T  34945207 tagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtca 34945280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 7035651 - 7035697
Alignment:
Q  20 atttgtatgtaaa--tcatgtctaaaagcaaaagttacaaattttaa 64  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||    
T  7035651 atttgtatgtaaaaatcatgtctaaaagtaaaagttacaaattttaa 7035697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 39567061 - 39567154
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| |||| |||| ||||||||||||| |   ||||||| |||  |||||| ||| |||| ||||| ||| |||||| ||||||||||    
T  39567061 aatagtcggccctaattttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtca 39567154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 14726781 - 14726741
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaac 403  Q
    ||||||||||||||||||||||||  ||||||||| |||||    
T  14726781 cctagttttctagtgagagaaactttaacttctctctaaac 14726741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 445
Target Start/End: Original strand, 35850574 - 35850642
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    |||||||| || || |||||| |||||||| |||||| ||| || ||| ||| ||||||||||||||||    
T  35850574 gagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtc 35850642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 354 - 446
Target Start/End: Complemental strand, 31013891 - 31013799
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  31013891 atagtcggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 31013799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 354 - 446
Target Start/End: Complemental strand, 8412669 - 8412577
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||| ||  |||||||||||||||||    
T  8412669 atagtcggtcctagttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtca 8412577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 356 - 446
Target Start/End: Original strand, 10377468 - 10377558
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10377468 agtcggccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 10377558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 27110774 - 27110692
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| | |  ||||||||||||||||    
T  27110774 ctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtca 27110692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 446
Target Start/End: Complemental strand, 45446124 - 45446039
Alignment:
Q  361 gtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| |||  |||| |||||| ||||    
T  45446124 gtcctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtca 45446039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 17693922 - 17693841
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||  ||| ||||| |||||||||||    
T  17693922 tagttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtca 17693841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 444
Target Start/End: Complemental strand, 40211627 - 40211536
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||||||| | ||||||||||||||||||||||| || |||||| |||| |||||||||||||| || ||| ||| ||||||| |||||||    
T  40211627 aatagtcggccttagttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggt 40211536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 25191376 - 25191294
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||  |||||| ||| | |||| ||||||||||    
T  25191376 ctagttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtca 25191294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 20553553 - 20553477
Alignment:
Q  366 agttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    |||||||||| ||||||||| | ||||||||| |||||||| ||||| |||| |||||| ||| |||||||||||||    
T  20553553 agttttctagggagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttag 20553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 364 - 424
Target Start/End: Original strand, 37971074 - 37971134
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    ||||||||||| |||||||||||| ||||||||| |||| ||||||||| |||||||||||    
T  37971074 ctagttttctaatgagagaaactccaacttctctctaaattttctttcttcttcattcatc 37971134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 3673226 - 3673307
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| |||| |||| |||||||  ||||||||| |||||||||||||||||| ||||||| | | ||| |||||||||||||    
T  3673226 tagtattctggtgaaagaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtca 3673307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 8980977 - 8981058
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||||||||| ||||||||| |||  |||| ||||| |||| || || ||| |||||||||||||||||    
T  8980977 tagttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtca 8981058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 23230436 - 23230504
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||| |||  |||| |||||||||||    
T  23230436 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtca 23230504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 20560052 - 20559976
Alignment:
Q  366 agttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    |||||||||| ||||||||| | ||||||||| |||||||| ||||| |||| |||||| | | |||||||||||||    
T  20560052 agttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttag 20559976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 20571614 - 20571538
Alignment:
Q  366 agttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    |||||||||| ||||||||| | ||||||||| |||||||| ||||| |||| |||||| | | |||||||||||||    
T  20571614 agttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttag 20571538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 444
Target Start/End: Complemental strand, 27498641 - 27498565
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||| |||||||||||||  ||||| ||| ||| |||||||||||||||||||||| | | |||| ||||||||||    
T  27498641 ttttcaagtgagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt 27498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 7677591 - 7677508
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| | |||||| |||||| || |||||| |||| ||||||||| |||| |||||  ||| |||||||||||||||||    
T  7677591 cctagttttattgtgagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtca 7677508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 445
Target Start/End: Complemental strand, 33214930 - 33214860
Alignment:
Q  375 gtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    |||||| |||||  || |||||| ||||||||||||||||||| |||||| |||  |||||||||||||||    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtc 33214860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 446
Target Start/End: Original strand, 41684220 - 41684294
Alignment:
Q  372 ctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||| |||||| || ||  ||||||||||||||||||||| ||||    ||||||||||||||    
T  41684220 ctagtgagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtca 41684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 15344094 - 15344167
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| |||  |||  ||||| |||| ||||| ||| |||||||||||||||||    
T  15344094 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtca 15344167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 15433159 - 15433232
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| |||  |||  ||||| |||| ||||| ||| |||||||||||||||||    
T  15433159 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtca 15433232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 15524463 - 15524536
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| |||  |||  ||||| |||| ||||| ||| |||||||||||||||||    
T  15524463 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtca 15524536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 8443831 - 8443749
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||| ||||||| || ||||| || || |||| | |||| |||||||||| |||||||||||| | |||||||||||||||||    
T  8443831 cctagctttctagcgaaagaaattccaatttctttttaaattttctttctctttcattcatcaa-gaggggtggttttaggtca 8443749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 29937905 - 29937972
Alignment:
Q  375 gtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    ||||||||||||| || |||||| |||||||||||||| |||| |||||  |||  ||||||||||||    
T  29937905 gtgagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttag 29937972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 44092055 - 44091994
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaac---tttctttctccttcattcatcaa 426  Q
    |||||||||||||||||||||||||||||| | |||   ||| ||| |||||||||||||||    
T  44092055 ttttctagtgagagaaactcaaacttctctttgaacttttttttttttccttcattcatcaa 44091994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 36948738 - 36948688
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    |||||||| |||||  ||||||||| |||||||||||||||||| ||||||    
T  36948738 tagtgagacaaacttcaacttctctttaaactttctttctcctttattcat 36948688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 356 - 446
Target Start/End: Complemental strand, 45568764 - 45568674
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  45568764 agtcggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 45568674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 10232846 - 10232929
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  10232846 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtca 10232929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 9998242 - 9998325
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  9998242 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 9998325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 21431401 - 21431484
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  21431401 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 21431484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 32701274 - 32701357
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  32701274 cctagttttctagtggaagaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtca 32701357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 355 - 446
Target Start/End: Original strand, 40487093 - 40487184
Alignment:
Q  355 tagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||| ||||||||||    
T  40487093 tagtcggccctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtca 40487184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 47895922 - 47896002
Alignment:
Q  358 tcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggtt 438  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  47895922 tcggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggtt 47896002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 10108014 - 10108097
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||  |||||| ||| |||||||||||||||||    
T  10108014 cctagttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca 10108097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 35865246 - 35865163
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||| || ||| |||||||||||||||||    
T  35865246 cctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtca 35865163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 48651048 - 48650965
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||||||||| || |||||| ||| |||||||||||||||||    
T  48651048 cctagttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtca 48650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 10229250 - 10229332
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    ||||||||||||||| ||||||||| || |||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  10229250 cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtc 10229332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 40556487 - 40556570
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||| | ||||||||||||||| ||| |||||| ||| |||||||||||||||||    
T  40556487 cctagttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtca 40556570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 43016631 - 43016714
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||| |||||| |||  ||||||||||||||||    
T  43016631 cctagttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtca 43016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 366 - 446
Target Start/End: Original strand, 38545614 - 38545694
Alignment:
Q  366 agttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||  ||| | |||||||||||||||    
T  38545614 agttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtca 38545694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 47042365 - 47042282
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||||||||| |||||||| ||||||||| |||||||| ||| |||||| |||||| ||| |||||||||||||||||    
T  47042365 cctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtca 47042282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 424
Target Start/End: Complemental strand, 43488910 - 43488849
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    ||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  43488910 cctagttttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc 43488849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 21534119 - 21534039
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    ||||||| ||||||||||||||| || |||||| ||||||||||||||||||| || ||| |||  |||||||||||||||    
T  21534119 tagttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc 21534039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 6955009 - 6954926
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||||||||||||| ||||   ||| |||||| ||||||||||    
T  6955009 cctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtca 6954926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 446
Target Start/End: Complemental strand, 7449217 - 7449132
Alignment:
Q  360 ggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| |||||||||||| |||||||||  ||||||| |||||| ||| ||||| |||| ||| |||||||||||||    
T  7449217 ggtcctagttttctaatgagagaaactccaacttctct-caaactttttttctctttcgttcattaaggagggctggttttaggtca 7449132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 446
Target Start/End: Complemental strand, 7457359 - 7457274
Alignment:
Q  360 ggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| |||||||||||| |||||||||  ||||||| |||||| ||| ||||| |||| ||| |||||||||||||    
T  7457359 ggtcctagttttctaatgagagaaactccaacttctct-caaactttttttctctttcgttcattaaggagggctggttttaggtca 7457274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 446
Target Start/End: Complemental strand, 20465286 - 20465197
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||||||||| ||||||||||||  ||||||  | |||| ||||||||||||||||||||||||  |||||||||||| ||||    
T  20465286 agtcggccctagttttcttgtgagagaaacttcaacttccttttaaa-tttctttctccttcattcatcaagtaggggtggttttatgtca 20465197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 26276099 - 26276025
Alignment:
Q  370 ttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||| ||||||  ||| | |||||||||||||    
T  26276099 ttctggtgagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggt 26276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 363 - 444
Target Start/End: Complemental strand, 23800225 - 23800141
Alignment:
Q  363 cctagttttctagtgagagaaac-tcaaacttctctgtaaactttctttctccttcattcatc-aag-gtggggtggttttaggt 444  Q
    ||||||||||||||||||||||| ||||| |||||| |||| ||| ||||||||||||||||| ||| | |||||||||||||||    
T  23800225 cctagttttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggt 23800141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 37040575 - 37040635
Alignment:
Q  380 agaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggtttt 440  Q
    |||||||||||||||| | ||||||||||||||| ||| |||||||||| |||||||||||    
T  37040575 agaaactcaaacttctttctaaactttctttctctttcgttcatcaaggaggggtggtttt 37040635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 446
Target Start/End: Original strand, 33579648 - 33579727
Alignment:
Q  367 gttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||  ||||||||| |||||||||||| |||||| |||||| | |  ||||||||||| ||||    
T  33579648 gttttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtca 33579727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 36461744 - 36461661
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||  |  |||||| ||||||||||||||||||| |||||| |||  | ||||||||||||||    
T  36461744 cctagttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtca 36461661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 36910977 - 36910919
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttct 412  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  36910977 atagccggccctagttttctagtgagagaaactccaacttctctataaactttttttct 36910919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 9797833 - 9797780
Alignment:
Q  370 ttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||| |||||    
T  9797833 ttctagtgagagaaactccaacttctctctaaactttatttctccttcgttcat 9797780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 441
Target Start/End: Complemental strand, 12050947 - 12050883
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggtttta 441  Q
    ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||  | |||||||||    
T  12050947 gagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggtttta 12050883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 54148757 - 54148847
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| || ||||||||||||||||||||  |   || |||||| ||||||||||||||||||| |  ||| ||| |||||||||||||||||    
T  54148757 aatagttggccctagttttctagtgagagattc---aatttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtca 54148847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 629214 - 629136
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||||||||||||| ||||||||| |||  |||| ||| | |||| ||||| ||| |||||||||||||||||    
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtca 629136  T

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Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 445
Target Start/End: Complemental strand, 953728 - 953638
Alignment:
Q  355 tagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    |||||||  |||||||| ||||||||||||||| |  |||||| |||  ||||||||||||||||||||  ||| |  |||||||||||||    
T  953728 tagtcggctctagttttatagtgagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtc 953638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 411
Target Start/End: Complemental strand, 20988078 - 20988020
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttc 411  Q
    ||||| ||| ||||||||| ||||||||||||||| ||||||||| ||||||| |||||    
T  20988078 aatagccggccctagttttttagtgagagaaactccaacttctctctaaacttcctttc 20988020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 444
Target Start/End: Complemental strand, 31272120 - 31272038
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggg-gtggttttaggt 444  Q
    |||| |||||||||||||||||||| ||||||||| |||  ||||||| |||||| |||||| ||| ||| ||| ||||||||    
T  31272120 cctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggt 31272038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 46220456 - 46220538
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaagg-tggggtggttttaggtca 446  Q
    |||||||||||||| |||||||  ||||||||| ||||||||||||||| || ||| ||  |||  |||||||||||||||||    
T  46220456 tagttttctagtgatagaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtca 46220538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 29249024 - 29249080
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    |||| ||||||||||||||| ||||||||| |||  ||||||||||||||| |||||    
T  29249024 ttttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatc 29249080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 38142339 - 38142411
Alignment:
Q  355 tagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaag 427  Q
    ||||||||| ||||||| ||||||||||||||| |  |||| | |||  |||||||||| |||||||||||||    
T  38142339 tagtcggtcttagttttttagtgagagaaactccacattctttttaagttttctttctctttcattcatcaag 38142411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 52923428 - 52923368
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    |||| |||| |||||  |||||||| ||||||||| ||||||||||||||||||| |||||    
T  52923428 cctatttttttagtggaagaaactccaacttctctctaaactttctttctccttcgttcat 52923368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 422
Target Start/End: Complemental strand, 9688537 - 9688488
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattca 422  Q
    ||||||||||||||  ||||||||| |||| ||||||||| |||||||||    
T  9688537 tagtgagagaaacttcaacttctctctaaattttctttcttcttcattca 9688488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 446
Target Start/End: Original strand, 7546397 - 7546469
Alignment:
Q  374 agtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| |||| ||||||| |||  ||||||||||  ||| ||||| ||| |||||| ||||||||||    
T  7546397 agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtca 7546469  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 12150095 - 12150047
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttc 411  Q
    ||||||||| |||||||||| |||  ||||||||| |||||||||||||    
T  12150095 cctagttttttagtgagagacacttcaacttctctataaactttctttc 12150047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 356 - 446
Target Start/End: Original strand, 7646251 - 7646341
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  7646251 agtcggccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 7646341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 446
Target Start/End: Original strand, 1421450 - 1421540
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||| || ||||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  1421450 agtcgatcttagttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 1421540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 7448034 - 7448117
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||| |||||| |||||| ||| |||||||||||||||||    
T  7448034 cctagttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtca 7448117  T

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Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 353 - 446
Target Start/End: Complemental strand, 36943447 - 36943354
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| || ||||||||||||||||||||||||| || || ||| ||||||||||||||||||| || ||| ||| |||||||||||||||||    
T  36943447 aatagttggccctagttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtca 36943354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 353 - 446
Target Start/End: Complemental strand, 43397442 - 43397349
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||| |||||||||||| | |||| |||||| ||  |||||||||||||||||    
T  43397442 aatagccggccctagttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtca 43397349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 4778539 - 4778622
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||| ||||||||| ||||||| | ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  4778539 cctagttttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 4778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 12677609 - 12677526
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||| ||| ||||| |||| ||||||    
T  12677609 cctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtca 12677526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 27097718 - 27097635
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||| ||||||||||    
T  27097718 cctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtca 27097635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 35220117 - 35220195
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||   | |||||||||||||||    
T  35220117 cctagttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatc---gaggggtggttttaggt 35220195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 11985543 - 11985460
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||| || ||| | |||||||||| ||||    
T  11985543 cctagttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtca 11985460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 9169565 - 9169487
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||| ||| || ||| ||| |||||||||||||||||    
T  9169565 ttttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtca 9169487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 373 - 446
Target Start/End: Complemental strand, 7678181 - 7678108
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| || ||| | | |||||||||||||||||    
T  7678181 tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtca 7678108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 31788242 - 31788323
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||| ||| | || ||||||||||    
T  31788242 cctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggt 31788323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 4098889 - 4098972
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||| |||  |||||| |||||||||    
T  4098889 cctagttttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtca 4098972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 377 - 444
Target Start/End: Complemental strand, 5428167 - 5428100
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||||||||| ||||||||| |||| |||||||||||||| |||||| ||| |||||||||||||||    
T  5428167 gagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggt 5428100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 31129059 - 31128978
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| |||||||| |||||  ||||||||| ||||||||||||||||||| || ||| ||| |||||| ||||||||||    
T  31129059 tagttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtca 31128978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 374 - 446
Target Start/End: Original strand, 18763265 - 18763337
Alignment:
Q  374 agtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||| ||| | |||||||||| ||||    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtca 18763337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 446
Target Start/End: Complemental strand, 37876885 - 37876828
Alignment:
Q  389 aacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| |||||||||||||| |||| |||||| ||| |||||||||||||||||    
T  37876885 aacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtca 37876828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 36691653 - 36691732
Alignment:
Q  364 ctagttttctagtgagagaaactcaaac-ttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    |||||||||||||||||||||||| ||| |||| | ||||| ||||||||||||| || ||  ||| |||||||||||||    
T  36691653 ctagttttctagtgagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag 36691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 13119995 - 13120073
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    |||||||||||||||||||||||    ||||||| |||||| ||||||| ||||||||||| | |  ||||||||||||    
T  13119995 ctagttttctagtgagagaaactttgccttctctataaactctctttcttcttcattcatcgaagaagggtggttttag 13120073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 25509379 - 25509298
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    |||| ||||||||||||| |||||||||||| ||| | |||||||||||| |||| |||||| |||   ||||||||||||||    
T  25509379 cctaattttctagtgagaaaaactcaaacttttctct-aactttctttcttcttcgttcatcgaggaatggtggttttaggtc 25509298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 32448929 - 32448851
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||||||||||||| ||||||||| |||| |||  || || |||| ||||| ||| |||||||||||||||||    
T  32448929 ttttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtca 32448851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 357 - 446
Target Start/End: Complemental strand, 20146023 - 20145934
Alignment:
Q  357 gtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||||||||  |  |||||| |||  | ||||||| ||||| ||||||||| ||||  |||||||||||    
T  20146023 gtcggtcctagttttttagtgagagaaacttcacattctctttaagttatctttcttcttcactcatcaaggaggggcagttttaggtca 20145934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 424
Target Start/End: Complemental strand, 29279883 - 29279823
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    |||| |||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||||    
T  29279883 cctaattttcttgtgagagaaactccaacttctctctaacctttctttct-cttcattcatc 29279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 8809084 - 8809124
Alignment:
Q  379 gagaaactcaaacttctctgtaaactttctttctccttcat 419  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  8809084 gagaaactctaacttctctctaaactttctttctccttcat 8809124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 446
Target Start/End: Complemental strand, 12648242 - 12648154
Alignment:
Q  358 tcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| |||||||||  |||||||||||||| ||||||||| |||  |||||||||| || | || |  ||| |||||||||||||||||    
T  12648242 tcggccctagtttttaagtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtca 12648154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 423
Target Start/End: Complemental strand, 42698983 - 42698928
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    |||| ||||||||||||||  ||||||| | |||||||||||||||||| ||||||    
T  42698983 ttttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcat 42698928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 446
Target Start/End: Complemental strand, 36175713 - 36175671
Alignment:
Q  404 tttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||  | |||||||||||||||    
T  36175713 tttctttctccttcattcatcaagaagaggtggttttaggtca 36175671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 38444982 - 38445036
Alignment:
Q  392 ttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||||||||||||||||| |||||| | | | |||||||||||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca 38445036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 4042278 - 4042230
Alignment:
Q  375 gtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    ||||||||||||| ||||||||| |||||||| |||||| ||| |||||    
T  4042278 gtgagagaaactccaacttctctctaaactttttttctcattccttcat 4042230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 4904447 - 4904399
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctc 413  Q
    ||||||| |||| |||||||||  ||||||||| |||||||||||||||    
T  4904447 tagttttttagtaagagaaacttcaacttctctctaaactttctttctc 4904399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 39311194 - 39311146
Alignment:
Q  376 tgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    |||||||||||| |||||| || ||| |||||||||| |||||||||||    
T  39311194 tgagagaaactcgaacttcgctctaagctttctttcttcttcattcatc 39311146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 2520575 - 2520656
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  2520575 tagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 2520656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 358 - 446
Target Start/End: Complemental strand, 19853829 - 19853741
Alignment:
Q  358 tcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  19853829 tcggccctagttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtca 19853741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 353 - 446
Target Start/End: Complemental strand, 56156876 - 56156783
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||||  ||| ||||||||||  ||||||||||||||||    
T  56156876 aatagtcggtcctagttttttattgagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtca 56156783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 13633910 - 13633993
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||| ||| | |||||||||||||||    
T  13633910 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca 13633993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 446
Target Start/End: Complemental strand, 26633994 - 26633900
Alignment:
Q  352 taatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||| |||||  ||| |||||||| ||||||||    
T  26633994 taatagccggtcctagttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtca 26633900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 4143067 - 4142984
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||  |||||| ||| |||||||||||||||||    
T  4143067 cctagttttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtca 4142984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 21686554 - 21686471
Alignment:
Q  362 tcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||||||  |||||| ||| |||||||||| |||||    
T  21686554 tcctagttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtc 21686471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 22610980 - 22611063
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| ||| || ||| |||||||||||||||||    
T  22610980 cctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca 22611063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 53810824 - 53810907
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| | ||||||| ||||||||||| ||||||| |||||| ||| |||||||||||||||||    
T  53810824 cctagttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtca 53810907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 446
Target Start/End: Original strand, 5119128 - 5119217
Alignment:
Q  357 gtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||| |||||||||||||||||| ||| |  ||||||| | |||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  5119128 gtcggccctagttttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtca 5119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 10496140 - 10496221
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||| ||||||| |||||| ||| || ||||||||||||||    
T  10496140 tagttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtca 10496221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 367 - 446
Target Start/End: Complemental strand, 9165352 - 9165273
Alignment:
Q  367 gttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||| ||| ||||||||| ||| | |||||||||||||||    
T  9165352 gttttcttgtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtca 9165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 9178153 - 9178236
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| ||||||||||||  |  |||||| |||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  9178153 cctagttttctggtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtca 9178236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 48257762 - 48257679
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||| ||| | |||| ||| |||||||||||| ||||    
T  48257762 cctagttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtca 48257679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 35348102 - 35348185
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||| |||||||| ||||||||| |||||||| ||||||||||  |||||  || |||||| ||||||||||    
T  35348102 cctagttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtca 35348185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 446
Target Start/End: Complemental strand, 24099391 - 24099301
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| |||||||||||||||| |||||||  || |||||| |||||||||||||| || | |||||| ||| | |||||||||||||||    
T  24099391 agtcggccctagttttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtca 24099301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 22558764 - 22558695
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| || |||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||    
T  22558764 gagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtca 22558695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 26091221 - 26091165
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    |||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  26091221 ttttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatc 26091165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 54021662 - 54021740
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||||||||||||  || |||||| |||||||||||||| ||||||||||| |||  | ||||||||||||||    
T  54021662 ttttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtca 54021740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 33920850 - 33920931
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||||||||  ||||| ||  |||||||||||||| ||||||||||| ||   ||||||||||||||||    
T  33920850 tagttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtca 33920931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 424
Target Start/End: Complemental strand, 51024774 - 51024713
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    |||| ||||| |||||||||||||| ||||||||| || |||||||||||||||| ||||||    
T  51024774 cctaattttccagtgagagaaactccaacttctctctatactttctttctccttcgttcatc 51024713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 22300641 - 22300724
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||| ||||||||||| ||||||||| |||| ||| |||||| |||| || || ||| || ||||||||||||||    
T  22300641 cctagttttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtca 22300724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 446
Target Start/End: Complemental strand, 51888537 - 51888446
Alignment:
Q  355 tagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||| || |||||||||||  ||||| ||| ||   |||||||||| |||| ||||| ||| |||||||||||||||||    
T  51888537 tagtcggccctagttttttattgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtca 51888446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 441
Target Start/End: Original strand, 9713691 - 9713775
Alignment:
Q  357 gtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggtttta 441  Q
    ||||| ||||||||| ||||||||||||||| | ||||||| |||  | |||||||| |||| ||||| ||| |||||| |||||    
T  9713691 gtcggccctagttttttagtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgatttta 9713775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 29961249 - 29961189
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctcctt 416  Q
    ||||||| |||  |||||| |||||||||||| ||||||||| |||||||||||| |||||    
T  29961249 agtcggttctaactttctaatgagagaaactccaacttctctctaaactttctttttcctt 29961189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 43510010 - 43510078
Alignment:
Q  378 agagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||  ||||||||| ||||||||| ||||||||| |||||| | |  ||||||||||||||||    
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtca 43510078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 2635119 - 2635056
Alignment:
Q  103 tcaaaaccaattttaagcttccaaattcaattatgggccctctaaaagtgaaaccaaacataca 166  Q
    |||||| ||||||||  |||| | | |||||| ||| |||||||||||||||||||||||||||    
T  2635119 tcaaaatcaattttacacttctagaatcaattttggtccctctaaaagtgaaaccaaacataca 2635056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 7e-26; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 366 - 446
Target Start/End: Original strand, 42978389 - 42978469
Alignment:
Q  366 agttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  42978389 agttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 42978469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 353 - 446
Target Start/End: Complemental strand, 9450460 - 9450367
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| |||| |||||||||||||||||||| ||||||| | ||||||||||||||||||| |||||| ||| ||| |||||||||||||    
T  9450460 aatagtcggccctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtca 9450367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 37837769 - 37837688
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||| |||||||||||| ||||||||| |||||||| |||||||||| |||||  ||| |||||||||||||||||    
T  37837769 tagttttctaatgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtca 37837688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 48317123 - 48317042
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||| ||||| |||||||| ||||||||| |||| || ||||||||||| |||||||||| |||||||||||||||||    
T  48317123 tagttttcgagtgaaagaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtca 48317042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 354 - 446
Target Start/End: Complemental strand, 13797253 - 13797161
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||||||||||||||||||||||||||  ||||||||| |||| |||||||||| ||| |||||| |||  || |||||||||||||    
T  13797253 atagccggtcctagttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtca 13797161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 8013788 - 8013699
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    ||||||| | ||||||||| ||||||||||||||  ||||||||| |||||||||||||| |||  |||||| ||| |||||||||||||    
T  8013788 aatagtcagccctagttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttag 8013699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 12141607 - 12141538
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||| | | |||||||||||||||||    
T  12141607 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtca 12141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 361 - 444
Target Start/End: Complemental strand, 30757134 - 30757051
Alignment:
Q  361 gtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||||||||| ||||| ||||||||  ||||||||| |||| |||||||||| ||| |||||| ||| |||||||||||||||    
T  30757134 gtcctagttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggt 30757051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 39171905 - 39171822
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||||||| |||||| ||| | ||| |||||||||||||| |||| |||||| ||| ||||||||| |||||||    
T  39171905 cctagttttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtca 39171822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 39329106 - 39329024
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    |||| |||||||||||||||||||||||||| | | ||||||||||||||||||  |||||| ||| || |||| ||||||||    
T  39329106 cctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtc 39329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 19405065 - 19404984
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||||||||| ||||||||| ||||  |||||||||||| ||||||  ||  |||||||||||||||||    
T  19405065 tagttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtca 19404984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 48061214 - 48061283
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| ||||||||| |||||||||||| |||||| |||||| ||| | |||||||||||||||    
T  48061214 gagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtca 48061283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 4529857 - 4529940
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||  | ||||||| |||   |||||||||||||||||||||| | | |||| ||||||||||    
T  4529857 cctagttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtca 4529940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 421
Target Start/End: Complemental strand, 25287499 - 25287436
Alignment:
Q  358 tcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattc 421  Q
    ||||||||| |||| ||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  25287499 tcggtcctaattttttagtgagagaaactataacttctctataaattttctttctccttcattc 25287436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 446
Target Start/End: Original strand, 47590088 - 47590175
Alignment:
Q  359 cggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| |||||| |||||||||||| || ||||||||| |||| |||||||||| ||| |||||  ||| |||||| ||||||||||    
T  47590088 cggtccaagttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtca 47590175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 45350502 - 45350445
Alignment:
Q  366 agttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    |||||||||||||||||||||  ||||||||| |||||||| |||||||||| |||||    
T  45350502 agttttctagtgagagaaacttcaacttctctctaaactttttttctccttcgttcat 45350445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 19296656 - 19296739
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||| ||||||||| |||||| || |||  ||| ||| |||||| |||||| ||| |||||||||||||||||    
T  19296656 cctagttttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtca 19296739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 422
Target Start/End: Complemental strand, 34899913 - 34899858
Alignment:
Q  367 gttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattca 422  Q
    ||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| ||||    
T  34899913 gttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttca 34899858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 40992960 - 40993021
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||  |||| |||| ||||||    
T  40992960 cctagttttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatc 40993021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 446
Target Start/End: Original strand, 24770059 - 24770116
Alignment:
Q  389 aacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||||||||||||| ||| |||||| ||  |||||| ||||||||||    
T  24770059 aacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtca 24770116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 41554445 - 41554397
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaa 402  Q
    |||||||| ||||||||| ||||||||||||||| ||||| ||| ||||    
T  41554445 atagtcggccctagttttttagtgagagaaactctaacttttctttaaa 41554397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 7e-26; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 354 - 446
Target Start/End: Original strand, 12170263 - 12170355
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||| || |||||||||||||||| |||||| ||| |||||||||||||||||    
T  12170263 atagccggccctagttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtca 12170355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 33053481 - 33053398
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  33053481 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 33053398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 32328896 - 32328813
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||||||| |||||| ||| |||||||||||| ||||    
T  32328896 cctagttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtca 32328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 446
Target Start/End: Complemental strand, 3913893 - 3913804
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||| |||  ||||||||||||||||    
T  3913893 agtcggccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgagg-agggtggttttaggtca 3913804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 9723690 - 9723609
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatca-aggtggggtggttttaggtc 445  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||||||| ||| ||||||| ||| ||||||||||||||||    
T  9723690 tagttttctagtgaaagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtc 9723609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 444
Target Start/End: Complemental strand, 68313 - 68232
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||||||| ||||  ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| ||| |||||||||||    
T  68313 cctagttttttagtaggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggt 68232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 605983 - 606064
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||| |||||| ||| |||||| ||||| ||||    
T  605983 tagttttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtca 606064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 446
Target Start/End: Original strand, 23128391 - 23128478
Alignment:
Q  359 cggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||  ||| ||| | |||||||||||    
T  23128391 cggttctagtattctagtgggagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtca 23128478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 9721818 - 9721761
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatca 425  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  9721818 ttttctagtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca 9721761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 9719703 - 9719643
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatca 425  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  9719703 tagttttcttgtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca 9719643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 446
Target Start/End: Complemental strand, 29320149 - 29320092
Alignment:
Q  389 aacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||||||||||||||||| |||||| |||  ||||||||||||||||    
T  29320149 aacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtca 29320092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 30894416 - 30894492
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    ||||||||||| |||||||||||  ||||||||| |||||||| |||||||||| || ||| ||| |||||||||||||    
T  30894416 ctagttttcta-tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttag 30894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 32059691 - 32059769
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||| || || |||||| ||||| ||||||||| |||||||||| |||   |||||||||| ||||    
T  32059691 ttttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtca 32059769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 32192044 - 32191963
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtc 445  Q
    ||||||||| ||| ||||||||||| || || | | |||  |||||||||| |||||||||||||| ||||||||||||||||    
T  32192044 cctagttttttagagagagaaactctaattt-tgtctaagttttctttctctttcattcatcaaggaggggtggttttaggtc 32191963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 442
Target Start/End: Complemental strand, 7515501 - 7515436
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    ||||||| ||| ||||||||| ||||||| ||||||| ||| |||||| ||| |||||||||||||    
T  7515501 gagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttag 7515436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 30608823 - 30608742
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| |||||||||||||||||| ||| | | |||| ||| |||||||||||| ||| ||||  || |||||||||||||    
T  30608823 tagtttgctagtgagagaaactcaaccttttgtttaaattttttttctccttcatccattaaggatggatggttttaggtca 30608742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 424
Target Start/End: Complemental strand, 29255762 - 29255694
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    |||||| ||||  |||||||||||||||| || |||||||||  ||||| |||||||||||| ||||||    
T  29255762 agtcggccctaactttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatc 29255694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 1523175 - 1523268
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| |||| |||| ||||||||||||||| |  |||||| |||  ||| |||||| ||||  ||| |||| |||||| ||||||||||    
T  1523175 aatagtcggccctaattttatagtgagagaaactctacattctctctaagttttatttctctttcacacatgaaggaggggtgattttaggtca 1523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 24228007 - 24227942
Alignment:
Q  381 gaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||| |||  || |||| ||||| ||||||||||||||| || ||||||||||||||    
T  24228007 gaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtca 24227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 31852474 - 31852406
Alignment:
Q  376 tgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    ||||| |||||  ||||||||| ||| || |||||||| || | ||||||||| |||||||||||||||    
T  31852474 tgagataaactttaacttctctttaagctctctttctcatttactcatcaaggaggggtggttttaggt 31852406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 34878584 - 34878501
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||| ||| |||||||||||||||||    
T  34878584 cctagttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtca 34878501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 35484691 - 35484608
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  35484691 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtca 35484608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 356 - 444
Target Start/End: Original strand, 26535172 - 26535260
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    |||||| | ||||||||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||  | ||||||||||||    
T  26535172 agtcggccttagttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttaggt 26535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 3228049 - 3228132
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||||||| ||| |||||| ||||||||  |||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  3228049 cctagttttctagttagaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtca 3228132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 356 - 446
Target Start/End: Original strand, 31983952 - 31984042
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||| |||||||||||||| |||  |||||||||| | |||||||||||||||    
T  31983952 agtcggccctagatttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtca 31984042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 1742062 - 1742143
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||||||||| | ||||||| ||||||| ||| ||||||||||   |||||||||||||||    
T  1742062 tagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtca 1742143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 45415340 - 45415421
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||| |||| || ||| ||| |||||||||||||||||    
T  45415340 tagttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtca 45415421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 41176977 - 41177044
Alignment:
Q  379 gagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 41177044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 442
Target Start/End: Complemental strand, 10776772 - 10776694
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    |||||||| ||| ||||||||||| || |||||| |||||||||||||||||||||||||| |||  ||||||||||||    
T  10776772 ctagttttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttag 10776694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 15435184 - 15435102
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||| || |||||||||||| |||||||||  |||| |||||||| ||||||||||||||| |||| ||||||||||||    
T  15435184 ctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtca 15435102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 353 - 438
Target Start/End: Complemental strand, 7337986 - 7337901
Alignment:
Q  353 aatagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggtt 438  Q
    ||||| ||| |||||||||||||||| |||||||  ||||||||| ||||||||||||||||||| |||||| ||| ||| |||||    
T  7337986 aatagccggccctagttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggtt 7337901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 29738935 - 29738866
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| ||| ||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  29738935 gagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 29738866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 51916965 - 51916885
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttagg 443  Q
    ||||||||| ||||||||||||||  || || ||| ||||||||||||||||||| |||||  ||| ||||||||||||||    
T  51916965 cctagttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttagg 51916885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 44915429 - 44915508
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtgggg-tggttttaggtca 446  Q
    ||||||||||||| ||| |  ||||||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||||    
T  44915429 ttttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtca 44915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 21947939 - 21947850
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    |||||||| | ||||||||||||||||||||||  || || ||| |||||||||||||| |||| |||||| |||  ||||||||||||||    
T  21947939 atagtcggccttagttttctagtgagagaaacttcaatttttctctaaactttctttct-cttcgttcatcgaggatgggtggttttaggt 21947850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 14872420 - 14872501
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||||||||| ||||||| | | |||||||||||| ||||||||||| ||  || |||||||| |||||    
T  14872420 tagttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtca 14872501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 441
Target Start/End: Original strand, 27456320 - 27456397
Alignment:
Q  364 ctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggtttta 441  Q
    |||||||| |||||||| |||||  ||||||| | ||||||||||||||||||||||| || ||| ||| ||||||||    
T  27456320 ctagttttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggtttta 27456397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 446
Target Start/End: Original strand, 12634937 - 12635029
Alignment:
Q  354 atagtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||   ||| |||||| |||| || || |||  | ||||||||||||||    
T  12634937 atagtcggccctagttttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtca 12635029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 18939111 - 18939184
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||  | ||||||| |||  ||||||||||||||||| ||| ||| | |||||||||||||||    
T  18939111 tagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtca 18939184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 35462349 - 35462268
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||| ||||||||| ||||| ||| ||||||||||||||||||| || ||  ||   ||||||||||||||||    
T  35462349 tagttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtca 35462268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 7837059 - 7836996
Alignment:
Q  383 aactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||| ||||||||| ||||| ||||||||| ||| |||||| |||  ||||||||||||||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtca 7836996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 8212195 - 8212144
Alignment:
Q  391 cttctctgtaaactttctttctccttcattcatcaaggtggggtggttttag 442  Q
    ||||||| |||| ||| ||||||||||||||||||||| |||||| ||||||    
T  8212195 cttctctttaaaatttttttctccttcattcatcaaggaggggtgcttttag 8212144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 446
Target Start/End: Original strand, 32394818 - 32394861
Alignment:
Q  403 ctttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggtggttttaggtca 32394861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 32679412 - 32679329
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| |||||||||||| || ||||| ||| |||  |||||||||| |||| || || ||| |||||||||||| ||||    
T  32679412 cctagttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtca 32679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 446
Target Start/End: Original strand, 49626701 - 49626772
Alignment:
Q  375 gtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||| ||||||||| |||   ||| ||||| |||| ||||| ||| |||||||||||||||||    
T  49626701 gtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtca 49626772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 15836001 - 15836055
Alignment:
Q  392 ttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| | ||||||||||||| || ||||||||||| | |||||||||||||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtca 15836055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 4413097 - 4413166
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| ||||| ||| |||||||||||||| |||| || ||| ||| || || |||||||||||    
T  4413097 gagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtca 4413166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 45789346 - 45789427
Alignment:
Q  365 tagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||| ||||||||||||||| |  |||||| |||| ||| ||||| ||||||||||| |||   | |||||||||||||    
T  45789346 tagttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtca 45789427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 44543057 - 44543133
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggt 444  Q
    |||| ||||||||||||||| ||||||||| |||  |||| ||||| |||| ||||| |||  ||||| ||||||||    
T  44543057 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggt 44543133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 15268 - 15351
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||| || ||| |||||||||||||||||    
T  15268 cctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtca 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 72177 - 72094
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  72177 cctagttttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 72094  T

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Target: scaffold0017 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 33061 - 32978
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| || ||| ||| || ||||||||||||||    
T  33061 cctagttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtca 32978  T

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Target: scaffold0088 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 50562 - 50645
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||| |||||  ||| |||||| ||||||||||    
T  50562 cctagttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtca 50645  T

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Target: scaffold0219 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 424
Target Start/End: Complemental strand, 15151 - 15090
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatc 424  Q
    ||||| ||||||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  15151 cctagatttctagtgagagaaactccaatttctctctaaactttctttctccttcattcatc 15090  T

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Target: scaffold0445 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 1120 - 1203
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||| ||||||| ||||||  ||||||||| |||| |||||||||||||| |||||| ||| | |||||||||||||||    
T  1120 cctagttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtca 1203  T

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Target: scaffold0554 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 380 - 446
Target Start/End: Original strand, 10672 - 10738
Alignment:
Q  380 agaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||| ||||||||| ||||||| ||| |||||||||||||| ||| | |||||||||||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtca 10738  T

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Target: scaffold0884 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 2271 - 2202
Alignment:
Q  377 gagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||| ||||||||| |||||||| |||||||||| |||||| ||| || ||||||||| ||||    
T  2271 gagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtca 2202  T

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Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 441
Target Start/End: Complemental strand, 19355 - 19271
Alignment:
Q  356 agtcggtcctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggtttta 441  Q
    |||||| |||| |||| ||||||||||||||| ||||||||| | || |||||||||| |||| ||||| ||| ||||||||||||    
T  19355 agtcggacctaattttttagtgagagaaactccaacttctctct-aattttctttctctttcactcatcgaggaggggtggtttta 19271  T

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Target: scaffold0087 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 25642 - 25559
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    ||||||||||||||||||||||||  ||||| ||| ||||     |||||||||| |||||| ||| |||||||||||| ||||    
T  25642 cctagttttctagtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggtggttttatgtca 25559  T

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Target: scaffold0492 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 12721 - 12775
Alignment:
Q  392 ttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||| | ||||||||||||| || ||||||||||| | |||||||||||||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtca 12775  T

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Target: scaffold0262 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 2120 - 2070
Alignment:
Q  373 tagtgagagaaactcaaacttctctgtaaactttctttctccttcattcat 423  Q
    ||||||||||||||| ||||||| |  ||||||||||||| ||||||||||    
T  2120 tagtgagagaaactccaacttctttcaaaactttctttcttcttcattcat 2070  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 58387 - 58309
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||| ||||||||||||||| ||||||||| |||  |||| || || |||| || || ||| |||||||||||||||||    
T  58387 ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtca 58309  T

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Target: scaffold0618 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 397
Target Start/End: Original strand, 7854 - 7883
Alignment:
Q  368 ttttctagtgagagaaactcaaacttctct 397  Q
    ||||||||||||||||||||||||||||||    
T  7854 ttttctagtgagagaaactcaaacttctct 7883  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 25124 - 25190
Alignment:
Q  378 agagaaactcaaacttctctgtaaactttctttctccttcattcatcaaggtggggtggttttaggtca 446  Q
    |||||||||  ||||| ||| ||||||||||||||| ||||||||||  || |||||||||||| ||||    
T  25124 agagaaacttcaacttttctctaaactttctttctctttcattcatc--ggaggggtggttttaagtca 25190  T

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Target: scaffold0634 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 8290 - 8338
Alignment:
Q  363 cctagttttctagtgagagaaactcaaacttctctgtaaactttctttc 411  Q
    ||||||||| |||||||||| |||  ||||||||| |||||||||||||    
T  8290 cctagttttttagtgagagacacttcaacttctctataaactttctttc 8338  T

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