View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13467_low_2 (Length: 536)

Name: NF13467_low_2
Description: NF13467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13467_low_2
NF13467_low_2
[»] chr1 (56 HSPs)
chr1 (111-296)||(8092596-8092781)
chr1 (111-296)||(51726777-51726962)
chr1 (115-296)||(14169617-14169798)
chr1 (148-296)||(24517584-24517732)
chr1 (140-296)||(40109359-40109515)
chr1 (113-277)||(36509828-36509992)
chr1 (144-303)||(26801934-26802093)
chr1 (111-296)||(22167777-22167956)
chr1 (111-244)||(21277044-21277177)
chr1 (198-296)||(40110672-40110770)
chr1 (113-273)||(19466140-19466300)
chr1 (111-250)||(9633819-9633958)
chr1 (198-296)||(24516332-24516430)
chr1 (175-296)||(36511328-36511449)
chr1 (169-296)||(14765085-14765212)
chr1 (199-295)||(26803237-26803333)
chr1 (220-299)||(43807430-43807509)
chr1 (111-244)||(13930608-13930741)
chr1 (124-288)||(14764235-14764399)
chr1 (220-296)||(38280848-38280924)
chr1 (164-296)||(40811193-40811325)
chr1 (207-302)||(38283768-38283863)
chr1 (222-296)||(51725341-51725415)
chr1 (112-277)||(2972942-2973107)
chr1 (111-244)||(14071137-14071269)
chr1 (112-193)||(13642491-13642572)
chr1 (175-296)||(19464598-19464719)
chr1 (219-303)||(40812652-40812734)
chr1 (116-245)||(49141434-49141563)
chr1 (220-296)||(30743085-30743161)
chr1 (220-296)||(43808563-43808639)
chr1 (114-181)||(9415737-9415804)
chr1 (111-194)||(44977321-44977404)
chr1 (111-193)||(23082059-23082141)
chr1 (118-192)||(29001062-29001136)
chr1 (235-296)||(21246532-21246593)
chr1 (116-193)||(51299384-51299461)
chr1 (118-193)||(22766760-22766835)
chr1 (111-244)||(26056080-26056213)
chr1 (12-75)||(13930513-13930577)
chr1 (12-75)||(14071042-14071106)
chr1 (113-173)||(34258644-34258704)
chr1 (111-143)||(40811403-40811435)
chr1 (113-173)||(51300192-51300252)
chr1 (114-202)||(52742912-52743000)
chr1 (177-244)||(13641307-13641374)
chr1 (196-277)||(2971715-2971797)
chr1 (111-173)||(16757454-16757516)
chr1 (111-193)||(50678464-50678546)
chr1 (254-299)||(22169295-22169340)
chr1 (207-244)||(26054947-26054984)
chr1 (119-148)||(34653511-34653540)
chr1 (175-244)||(49139851-49139920)
chr1 (111-192)||(51218899-51218980)
chr1 (113-193)||(27689384-27689464)
chr1 (177-277)||(48332732-48332832)
[»] chr4 (65 HSPs)
chr4 (300-519)||(3018832-3019034)
chr4 (111-277)||(50530520-50530686)
chr4 (113-296)||(34438404-34438587)
chr4 (111-229)||(6140293-6140411)
chr4 (111-301)||(17319035-17319225)
chr4 (111-303)||(38418950-38419142)
chr4 (117-296)||(43419314-43419493)
chr4 (117-302)||(44159077-44159262)
chr4 (140-296)||(41349487-41349643)
chr4 (111-244)||(38555209-38555342)
chr4 (220-303)||(43708827-43708910)
chr4 (175-301)||(34439657-34439783)
chr4 (111-236)||(31712439-31712564)
chr4 (208-296)||(38417551-38417639)
chr4 (204-296)||(41348237-41348329)
chr4 (110-193)||(28102177-28102260)
chr4 (111-244)||(11114913-11115046)
chr4 (220-304)||(11482786-11482870)
chr4 (117-245)||(26393066-26393194)
chr4 (117-244)||(3533547-3533674)
chr4 (208-303)||(50531786-50531881)
chr4 (116-193)||(38370383-38370461)
chr4 (235-296)||(26045130-26045191)
chr4 (111-244)||(35787846-35787979)
chr4 (235-296)||(47573701-47573762)
chr4 (130-250)||(30682979-30683099)
chr4 (220-296)||(43709916-43709991)
chr4 (117-244)||(29663692-29663819)
chr4 (127-229)||(86868-86970)
chr4 (113-303)||(17494118-17494308)
chr4 (171-296)||(6138995-6139120)
chr4 (117-193)||(56296294-56296370)
chr4 (221-296)||(43418031-43418106)
chr4 (220-299)||(50498014-50498093)
chr4 (117-244)||(56000337-56000464)
chr4 (113-173)||(2162733-2162793)
chr4 (220-296)||(47572585-47572660)
chr4 (12-62)||(6140198-6140249)
chr4 (111-282)||(39592222-39592393)
chr4 (111-244)||(11094576-11094707)
chr4 (254-296)||(44160486-44160528)
chr4 (171-244)||(5688630-5688703)
chr4 (171-244)||(33377357-33377430)
chr4 (235-296)||(47244047-47244108)
chr4 (111-244)||(47668530-47668663)
chr4 (111-244)||(52660147-52660280)
chr4 (117-173)||(1188967-1189023)
chr4 (170-282)||(11113754-11113866)
chr4 (220-296)||(48413593-48413669)
chr4 (220-296)||(50496993-50497069)
chr4 (171-250)||(5687219-5687298)
chr4 (177-236)||(44304978-44305037)
chr4 (12-62)||(50530730-50530781)
chr4 (222-296)||(5417302-5417376)
chr4 (235-277)||(26059842-26059884)
chr4 (111-193)||(29687911-29687993)
chr4 (111-193)||(44302821-44302903)
chr4 (122-192)||(44655823-44655893)
chr4 (220-282)||(47242964-47243026)
chr4 (196-245)||(3528239-3528288)
chr4 (113-174)||(13533193-13533254)
chr4 (111-183)||(15787063-15787136)
chr4 (171-244)||(37559048-37559121)
chr4 (112-173)||(40144657-40144718)
chr4 (117-173)||(44503615-44503671)
[»] chr2 (38 HSPs)
chr2 (110-296)||(25570802-25570988)
chr2 (112-296)||(14509207-14509391)
chr2 (111-296)||(7983628-7983812)
chr2 (117-296)||(15850598-15850777)
chr2 (111-252)||(7037008-7037149)
chr2 (118-277)||(7490135-7490294)
chr2 (111-250)||(12959638-12959777)
chr2 (119-277)||(4829482-4829640)
chr2 (111-245)||(10367288-10367422)
chr2 (1-75)||(25570697-25570771)
chr2 (111-250)||(37868973-37869112)
chr2 (111-193)||(11575419-11575501)
chr2 (111-277)||(35799529-35799695)
chr2 (111-244)||(12852936-12853069)
chr2 (207-296)||(14510538-14510627)
chr2 (171-296)||(3533619-3533744)
chr2 (112-193)||(8537113-8537194)
chr2 (116-193)||(28109807-28109884)
chr2 (188-296)||(25569767-25569875)
chr2 (220-303)||(15850103-15850186)
chr2 (220-302)||(7982304-7982386)
chr2 (111-244)||(23177724-23177857)
chr2 (111-244)||(23588981-23589114)
chr2 (113-193)||(14714593-14714673)
chr2 (124-277)||(3532211-3532364)
chr2 (187-244)||(6706976-6707033)
chr2 (111-244)||(29424545-29424678)
chr2 (254-301)||(8538701-8538748)
chr2 (220-299)||(33553407-33553486)
chr2 (220-286)||(20630713-20630779)
chr2 (171-229)||(42027258-42027316)
chr2 (171-244)||(2581853-2581926)
chr2 (111-164)||(28562740-28562793)
chr2 (112-189)||(45047447-45047524)
chr2 (111-159)||(3528198-3528246)
chr2 (113-193)||(4512207-4512287)
chr2 (113-193)||(26205114-26205194)
chr2 (175-235)||(40174761-40174821)
[»] chr3 (44 HSPs)
chr3 (111-296)||(12062317-12062502)
chr3 (112-293)||(48867364-48867545)
chr3 (111-296)||(23559817-23560002)
chr3 (111-296)||(43346380-43346565)
chr3 (117-277)||(21127942-21128102)
chr3 (111-277)||(35174315-35174481)
chr3 (175-296)||(48866139-48866260)
chr3 (220-296)||(1031814-1031890)
chr3 (112-244)||(26798840-26798972)
chr3 (111-277)||(8371237-8371403)
chr3 (207-296)||(43345317-43345406)
chr3 (115-244)||(47765488-47765617)
chr3 (221-296)||(12060657-12060731)
chr3 (113-180)||(49333097-49333164)
chr3 (222-296)||(39530793-39530867)
chr3 (207-296)||(23561154-23561243)
chr3 (220-301)||(50150714-50150795)
chr3 (111-244)||(53808368-53808501)
chr3 (116-244)||(19622055-19622183)
chr3 (220-296)||(35173145-35173221)
chr3 (111-244)||(11219480-11219613)
chr3 (111-244)||(17350035-17350168)
chr3 (116-173)||(45421230-45421287)
chr3 (220-296)||(2088840-2088916)
chr3 (220-296)||(7921685-7921761)
chr3 (221-305)||(45730626-45730710)
chr3 (117-173)||(48254828-48254884)
chr3 (220-296)||(53901567-53901643)
chr3 (171-250)||(51825614-51825693)
chr3 (222-296)||(32999795-32999869)
chr3 (113-193)||(7483460-7483540)
chr3 (113-173)||(40364443-40364503)
chr3 (113-164)||(31282470-31282521)
chr3 (12-62)||(35174221-35174272)
chr3 (111-193)||(32979189-32979271)
chr3 (111-193)||(39133118-39133200)
chr3 (220-282)||(39531858-39531920)
chr3 (113-155)||(46495636-46495678)
chr3 (171-244)||(41386180-41386253)
chr3 (235-296)||(46690351-46690412)
chr3 (112-173)||(53420441-53420502)
chr3 (148-244)||(25583164-25583260)
chr3 (176-244)||(29536764-29536832)
chr3 (220-296)||(33000842-33000918)
[»] chr5 (45 HSPs)
chr5 (117-302)||(12862857-12863042)
chr5 (117-302)||(12830877-12831062)
chr5 (111-296)||(32734131-32734314)
chr5 (111-244)||(223276-223409)
chr5 (111-240)||(2167448-2167576)
chr5 (113-296)||(42510112-42510295)
chr5 (111-245)||(40058067-40058201)
chr5 (111-236)||(5383000-5383125)
chr5 (114-250)||(38471333-38471469)
chr5 (111-277)||(7426658-7426824)
chr5 (111-244)||(19525221-19525354)
chr5 (117-244)||(15856584-15856710)
chr5 (220-303)||(11907203-11907286)
chr5 (117-225)||(22819456-22819564)
chr5 (111-244)||(12933801-12933934)
chr5 (208-285)||(15857648-15857725)
chr5 (207-296)||(22819578-22819667)
chr5 (175-282)||(8188197-8188304)
chr5 (111-190)||(12948016-12948095)
chr5 (218-296)||(39134665-39134743)
chr5 (207-296)||(42511695-42511784)
chr5 (220-296)||(24070403-24070479)
chr5 (187-275)||(30253605-30253693)
chr5 (116-193)||(19825975-19826052)
chr5 (175-299)||(224587-224711)
chr5 (12-75)||(32734345-32734409)
chr5 (12-74)||(12933966-12934029)
chr5 (12-74)||(12948127-12948190)
chr5 (222-277)||(24761765-24761820)
chr5 (114-181)||(41906334-41906401)
chr5 (111-153)||(24761620-24761662)
chr5 (171-301)||(32735472-32735602)
chr5 (175-244)||(5384343-5384412)
chr5 (223-284)||(8187176-8187236)
chr5 (231-296)||(29221188-29221252)
chr5 (220-301)||(39135690-39135771)
chr5 (220-296)||(21006138-21006214)
chr5 (127-175)||(22019295-22019343)
chr5 (177-244)||(15613555-15613622)
chr5 (171-245)||(10085838-10085912)
chr5 (220-277)||(8284286-8284343)
chr5 (239-296)||(12861547-12861604)
chr5 (111-244)||(21387687-21387820)
chr5 (235-295)||(11906354-11906414)
chr5 (220-296)||(21011850-21011926)
[»] chr8 (48 HSPs)
chr8 (112-277)||(13366984-13367149)
chr8 (111-301)||(20308598-20308788)
chr8 (111-301)||(21095231-21095421)
chr8 (111-296)||(8095345-8095529)
chr8 (111-277)||(2421226-2421392)
chr8 (170-296)||(22619893-22620019)
chr8 (110-244)||(36070228-36070362)
chr8 (111-296)||(34617128-34617313)
chr8 (111-244)||(44606189-44606322)
chr8 (111-229)||(35943973-35944091)
chr8 (111-244)||(19913542-19913675)
chr8 (198-311)||(22621154-22621267)
chr8 (122-296)||(41522632-41522806)
chr8 (113-280)||(39220693-39220860)
chr8 (117-245)||(24069385-24069513)
chr8 (111-245)||(7486126-7486260)
chr8 (112-185)||(40250154-40250227)
chr8 (111-183)||(37324621-37324693)
chr8 (111-193)||(10052205-10052287)
chr8 (112-225)||(8395064-8395177)
chr8 (119-244)||(16363754-16363878)
chr8 (220-296)||(9189392-9189468)
chr8 (220-296)||(9190484-9190559)
chr8 (112-236)||(39546611-39546735)
chr8 (111-229)||(117113-117231)
chr8 (208-277)||(34616146-34616215)
chr8 (111-244)||(36756114-36756247)
chr8 (220-296)||(4534032-4534108)
chr8 (117-193)||(7770837-7770913)
chr8 (117-193)||(7796747-7796823)
chr8 (117-193)||(7816028-7816104)
chr8 (220-296)||(8096587-8096663)
chr8 (117-193)||(39515300-39515376)
chr8 (113-193)||(44103231-44103311)
chr8 (235-301)||(12818747-12818813)
chr8 (235-296)||(12820155-12820216)
chr8 (144-280)||(31871406-31871545)
chr8 (111-244)||(37472453-37472585)
chr8 (220-296)||(16346097-16346173)
chr8 (113-193)||(21670165-21670245)
chr8 (220-296)||(41521315-41521391)
chr8 (111-194)||(21267232-21267315)
chr8 (111-193)||(21961924-21962006)
chr8 (222-296)||(22914234-22914308)
chr8 (119-193)||(45384341-45384415)
chr8 (235-296)||(23768542-23768603)
chr8 (220-281)||(43579693-43579754)
chr8 (223-296)||(45195849-45195921)
[»] chr7 (37 HSPs)
chr7 (111-296)||(131932-132117)
chr7 (111-250)||(46458646-46458785)
chr7 (111-296)||(4167449-4167634)
chr7 (111-276)||(10256141-10256306)
chr7 (112-244)||(33459477-33459609)
chr7 (115-296)||(27899151-27899332)
chr7 (111-245)||(25154869-25155003)
chr7 (117-296)||(35484249-35484428)
chr7 (122-193)||(26406226-26406297)
chr7 (114-303)||(13286930-13287119)
chr7 (111-244)||(38406068-38406200)
chr7 (220-296)||(40881089-40881165)
chr7 (208-296)||(10257416-10257504)
chr7 (220-296)||(47927377-47927453)
chr7 (112-183)||(14109005-14109076)
chr7 (112-183)||(14418962-14419033)
chr7 (207-296)||(35315251-35315340)
chr7 (220-296)||(4168891-4168967)
chr7 (220-296)||(47537082-47537158)
chr7 (114-181)||(44113542-44113609)
chr7 (220-302)||(37781949-37782031)
chr7 (220-296)||(35483571-35483648)
chr7 (113-185)||(24872099-24872171)
chr7 (220-296)||(47928472-47928548)
chr7 (118-192)||(18668865-18668939)
chr7 (222-283)||(33071682-33071743)
chr7 (111-182)||(8661795-8661866)
chr7 (220-303)||(12631877-12631958)
chr7 (254-301)||(29344157-29344204)
chr7 (113-174)||(9662169-9662230)
chr7 (171-244)||(22060513-22060586)
chr7 (171-276)||(22746313-22746418)
chr7 (187-244)||(25153708-25153765)
chr7 (175-244)||(45721763-45721832)
chr7 (148-244)||(4857251-4857347)
chr7 (113-193)||(24494986-24495066)
chr7 (112-172)||(34598849-34598908)
[»] chr6 (31 HSPs)
chr6 (111-296)||(14328707-14328891)
chr6 (111-296)||(14421717-14421901)
chr6 (188-296)||(13800029-13800137)
chr6 (110-173)||(293572-293635)
chr6 (111-244)||(31738413-31738546)
chr6 (122-193)||(2130884-2130955)
chr6 (111-229)||(27440108-27440226)
chr6 (126-282)||(9927618-9927773)
chr6 (111-231)||(16268604-16268724)
chr6 (220-301)||(1757536-1757617)
chr6 (207-296)||(14326151-14326240)
chr6 (207-296)||(14419161-14419250)
chr6 (112-193)||(22298705-22298786)
chr6 (229-293)||(16269819-16269883)
chr6 (111-244)||(18139420-18139553)
chr6 (187-243)||(16269626-16269682)
chr6 (256-303)||(5693665-5693712)
chr6 (171-282)||(8412309-8412420)
chr6 (111-244)||(33801950-33802083)
chr6 (113-173)||(15728854-15728914)
chr6 (220-296)||(27107179-27107255)
chr6 (220-296)||(27148985-27149061)
chr6 (177-244)||(22299902-22299969)
chr6 (117-191)||(12773173-12773247)
chr6 (223-296)||(1692072-1692145)
chr6 (235-296)||(27108231-27108292)
chr6 (235-296)||(27150028-27150089)
chr6 (220-296)||(11724338-11724414)
chr6 (113-173)||(30231602-30231662)
chr6 (12-75)||(31738578-31738642)
chr6 (208-276)||(31740302-31740370)
[»] scaffold0122 (2 HSPs)
scaffold0122 (112-296)||(15948-16127)
scaffold0122 (223-296)||(17205-17278)
[»] scaffold0003 (1 HSPs)
scaffold0003 (111-229)||(47135-47253)
[»] scaffold0041 (1 HSPs)
scaffold0041 (220-296)||(85118-85194)
[»] scaffold1974 (1 HSPs)
scaffold1974 (111-282)||(561-732)
[»] scaffold1878 (1 HSPs)
scaffold1878 (111-282)||(542-713)
[»] scaffold0290 (1 HSPs)
scaffold0290 (111-282)||(9411-9582)
[»] scaffold0098 (2 HSPs)
scaffold0098 (207-283)||(42375-42451)
scaffold0098 (111-299)||(40911-41091)
[»] scaffold0009 (2 HSPs)
scaffold0009 (220-296)||(205594-205670)
scaffold0009 (236-296)||(204534-204593)
[»] scaffold0166 (2 HSPs)
scaffold0166 (222-277)||(4262-4317)
scaffold0166 (111-153)||(4117-4159)
[»] scaffold0025 (2 HSPs)
scaffold0025 (175-250)||(54635-54710)
scaffold0025 (111-236)||(56633-56758)
[»] scaffold0178 (2 HSPs)
scaffold0178 (113-183)||(1322-1391)
scaffold0178 (175-236)||(2262-2323)
[»] scaffold0015 (1 HSPs)
scaffold0015 (111-193)||(207731-207813)


Alignment Details
Target: chr1 (Bit Score: 162; Significance: 3e-86; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 8092781 - 8092596
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  8092781 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaaggaccaaatcagtaaacggaggaag 8092682  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  8092681 atttatggaaccaaattgatacacttaatagttaagggactacactgagaaaataaaataagttaagggaccgggagatgtattaa 8092596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 51726777 - 51726962
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||  | ||| |||  |||||||    ||||    
T  51726777 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacggtgaggactaaaatagtaaacgacagaag 51726876  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||||||||||| |||||| ||||||||  ||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  51726877 atttatggaaccaaattgagacactttatagttaaatgaccaaactgagaaaataaaataagttaagggaccgggggatgtattaa 51726962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 115 - 296
Target Start/End: Complemental strand, 14169798 - 14169617
Alignment:
Q  115 aataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagattt 214  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| || | |||||||  |||||||     |||||||    
T  14169798 aataaggtctatggtgggccacctataaagttggttcaccttagacatttaaggttaaaaactaacagataagaccaaaatagtaaacgacaaaagattt 14169699  T
Q  215 atggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||| |||||||||| ||| || |||||||| |||| | |||||||||||||||||||||||| ||| |||| |||||||||    
T  14169698 atgggaccaaattgagacattttatagttaaaggaccaaactgagaaaataaaataagttaagggactggggaatgtattaa 14169617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 148 - 296
Target Start/End: Original strand, 24517584 - 24517732
Alignment:
Q  148 gttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatg 247  Q
    |||||||||||| ||||||| ||||| |||||| |||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||| | |||| |    
T  24517584 gttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaacagaggaagatttatgggaccaaattgacacacttaaaaattaagg 24517683  T
Q  248 gactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    || || |||||||||||||||||||||||| ||||| ||||||||||||    
T  24517684 gattaaactgagaaaataaaataagttaagggaccgtgggatgtattaa 24517732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 40109515 - 40109359
Alignment:
Q  140 taaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaat 239  Q
    |||||||  ||||||||||| ||||||| ||||| |||||| |||| ||||| || ||||||| || |||||||||||| |||||||||||||||||||     
T  40109515 taaagttacttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaacggatgaagatttatgggaccaaattgacacacttaaa 40109416  T
Q  240 agttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||| |||  | |||||||||||||||||||||||| || || ||||||||||||    
T  40109415 agttaagggatcaaactgagaaaataaaataagttaagggatcgtgggatgtattaa 40109359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 113 - 277
Target Start/End: Complemental strand, 36509992 - 36509828
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagat 212  Q
    ||||||||||||||||||||  | |||||| ||| || |||| |||| |||| |||||||| ||||||||| |  ||||||  ||||||| |  ||||||    
T  36509992 ttaataaggtctatggtggaatatctataatgttagtccaccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaacggcagaagat 36509893  T
Q  213 ttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    ||||||||||||||||| |||||| |||||||| |||| | ||||||||||||||||||||||||    
T  36509892 ttatggaaccaaattgaaacactttatagttaagggaccaaactgagaaaataaaataagttaag 36509828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 26802093 - 26801934
Alignment:
Q  144 gttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtt 243  Q
    |||||||||||||||| ||||||| ||||| | |||| |||| ||||| || ||||||| |||||||| |||||  || ||||| |||||||||||||||    
T  26802093 gttggttcaccttagacatttaagattaaaaagtaacagaaaggaccatattagtaaacggaggaagacttatgagactaaatttacacacttaatagtt 26801994  T
Q  244 aatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    || |||  | ||||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  26801993 aagggatcaaactgaaaaaataaaataagctaagagaccggaggatgtattaagccaaaa 26801934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 22167956 - 22167777
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||| |||||||||| |||||||      ||||||||||||| |||||| || |  ||||||  | ||||| |  ||||    
T  22167956 atttaataaggtctatggtggaccatctataaagtttgttcacc------atttaaggttaaaaactaacagagagaaccaaaataataaacggcagaag 22167863  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| |||||||||| |||||||||| |||| |||||| ||||||||| |||||||||||||| ||   |||||||||||||    
T  22167862 atttatgggaccaaattgaaacacttaatatttaagggactaaactgagaaattaaaataagttaagggattaggggatgtattaa 22167777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 21277177 - 21277044
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||| | || ||||  ||||||| |  ||||    
T  21277177 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaaaactaatggagaggatcaaaatagtaaacggcagaag 21277078  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| | |||| |||||||    
T  21277077 atttatgggaccaaattgagatactttatagtta 21277044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 198 - 296
Target Start/End: Original strand, 40110672 - 40110770
Alignment:
Q  198 taaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| |||  | |||||||||||||||||||||||| || || ||||||||||||    
T  40110672 taaacagaggaagacttatgggaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaagggatcgagggatgtattaa 40110770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 19466140 - 19466300
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagat 212  Q
    ||||||||||||||||||||| | |||||| ||| || |||| |||| |||| |||||||| ||||||||| |  |||| |  |||||||    ||||||    
T  19466140 ttaataaggtctatggtggactatctataatgttagtccaccatagacatttgaggttaaaaactaacggagagaaccacaatagtaaacgacagaagat 19466239  T
Q  213 ttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagt 273  Q
    |||||| |||||||||| |||||| |||||||| |||| | ||||||||||||||||||||    
T  19466240 ttatgggaccaaattgagacactttatagttaaaggaccaaactgagaaaataaaataagt 19466300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 9633958 - 9633819
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||||| |||| | |||||| ||||||||| | || |||| | |||||| |  ||||    
T  9633958 atttaataaggtctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggatcaaaactgtaaacggttgaag 9633859  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggac 250  Q
    ||||||  ||||||||||| |||||| |||||||| ||||    
T  9633858 atttatataaccaaattgagacactttatagttaagggac 9633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 24516430 - 24516332
Alignment:
Q  198 taaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||||||| |||||  |||||||||||||||||||||||||| |||  | ||| |||||||||||||||||||| ||||||||||||||||||    
T  24516430 taaacggaggaagacttatgagaccaaattgacacacttaatagttaagggatcaaactcagaaaataaaataagttaagggaccgggggatgtattaa 24516332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 36511328 - 36511449
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagtt 274  Q
    ||||||||| |||||||||  |||||||    |||||||||||| |||||||||| |||||| |||||||| |||| | |||||||||||||||||| ||    
T  36511328 actaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgagaaaataaaataaatt 36511427  T
Q  275 aagagaccgggggatgtattaa 296  Q
    ||| ||| ||||||||||||||    
T  36511428 aagggactgggggatgtattaa 36511449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 14765085 - 14765212
Alignment:
Q  169 ttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaa 268  Q
    ||||||||||||||| | |||| ||  ||||||| |   || |||||||| |||||||||||||||||||||||||| |||| | |||||||||||||||    
T  14765085 ttaaatactaacggagaggaccgaaatagtaaactgcaaaaaatttatgggaccaaattgacacacttaatagttaagggaccaaactgagaaaataaaa 14765184  T
Q  269 taagttaagagaccgggggatgtattaa 296  Q
    ||||||||  |||||| | |||||||||    
T  14765185 taagttaaaggaccggagaatgtattaa 14765212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 26803237 - 26803333
Alignment:
Q  199 aaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtatta 295  Q
    ||||||| || || |||||||| ||||||||||||||||||||||||  ||  | |||||||||||||||||||||||| |||||||| ||||||||    
T  26803237 aaacagatgacgacttatggaatcaaattgacacacttaatagttaagagatcaaactgagaaaataaaataagttaagggaccggggaatgtatta 26803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 43807509 - 43807430
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaacc 299  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||  |||||| ||||||||||||||    
T  43807509 accaaattgaaacatttaatagttaatggactaaactgagaaattaaaataagttaaaggaccggaggatgtattaaacc 43807430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 13930608 - 13930741
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||| |||||| |||||||||| |||||  |||| ||||||||||||| || |||||||| |||||||   ||||||     |||    
T  13930608 atttaataaggtctatggtagaccacatataaagttgtttcacaatagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaacgacataag 13930707  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||| |||||||||| |||||| |||||||    
T  13930708 acttatgggaccaaattgagacactttatagtta 13930741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 124 - 288
Target Start/End: Complemental strand, 14764399 - 14764235
Alignment:
Q  124 tatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaacca 223  Q
    ||||||||||||||| ||||   ||||||||||| | |||||| |||||| |||||| || ||||| ||| ||||||||    ||||| |||||  ||||    
T  14764399 tatggtggaccacctttaaataaggttcaccttaaacatttaatgttaaaaactaacagagatgactaaaacagtaaacgacagaagacttatgagacca 14764300  T
Q  224 aattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccggggga 288  Q
    |||| |||||||||||| |||| |||  | ||| | |||||||||||||||||| |||| |||||    
T  14764299 aattaacacacttaataattaagggatcaaactaaaaaaataaaataagttaagggaccagggga 14764235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 38280924 - 38280848
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||| ||||  |||||| |||||||||||    
T  38280924 accaaattgacacaattaatagttaatggaccaaactgagaaaataaaataacttaaaggaccggaggatgtattaa 38280848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 40811325 - 40811193
Alignment:
Q  164 taaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaa 263  Q
    |||||||||| ||||||||| |||||||||  | ||||| |   |||| |||||| | |||||||| ||| ||||||||||| |||  | ||||||||||    
T  40811325 taaggttaaaaactaacggagatgaccaaaataataaacggcaaaagagttatgggatcaaattgagacatttaatagttaagggatcaaactgagaaaa 40811226  T
Q  264 taaaataagttaagagaccgggggatgtattaa 296  Q
    || ||||||||||| ||||| ||||||||||||    
T  40811225 tagaataagttaagggaccgagggatgtattaa 40811193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 302
Target Start/End: Original strand, 38283768 - 38283863
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaa 302  Q
    |||||| ||| | |||||||||||||||||||||| ||  |||||| ||||| |||||||||||||||||| ||||||||  |||||||| |||||    
T  38283768 gaagatatataggaccaaattgacacacttaatagatagaggactaaactgaaaaaataaaataagttaagggaccggggagtgtattaagccaaa 38283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 51725415 - 51725341
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| |||||| |||||||| |||||| ||||||||| |||||||||||||| ||||||||||| ||||||    
T  51725415 caaattgagacactttatagttaaaggactaaactgagaaattaaaataagttaagggaccgggggatatattaa 51725341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 277
Target Start/End: Original strand, 2972942 - 2973107
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||||||| || ||| || ||||| ||| ||||||||| ||||||||| |||||| |||||| |||||| |||| ||||| |  ||||||| | | ||||    
T  2972942 tttaataaagtttatagtagaccatctacaaagttggtacaccttagacatttaaagttaaaaactaacagaaaggaccacactagtaaacggggtaaga 2973041  T
Q  212 tttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
     |||| | |||||||||| |||||| ||| |||| |||||| | ||| || | |||||||||||||    
T  2973042 cttataggaccaaattgagacactttataattaagggactaaaatgaaaacaaaaaataagttaag 2973107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 14071137 - 14071269
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||| |||||| |||||| ||| |||||  |||| ||||||||||||| || |||||||| |||||||   ||||||    ||||    
T  14071137 atttaataaggtctatggtagaccacatataaa-ttgtttcacaatagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaacgacagaag 14071235  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||| |||||||||| |||||| |||||||    
T  14071236 acttatgggaccaaattgagacactttatagtta 14071269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 13642491 - 13642572
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||| || |||||| |||||||| ||||||| || ||||||||| ||||||||||||| ||||||||||  |||||||    
T  13642491 tttaataaagtttatggtagaccacctgtaaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaa 13642572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 19464719 - 19464598
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagtt 274  Q
    ||||| ||| |||||||||  ||||||| |  |||||||| |||||||||||||| |||||| ||| |||| |||| | ||||| |||||||||||||||    
T  19464719 actaatggagatgaccaaaatagtaaacggcagaagatttgtggaaccaaattgaaacactttataattaagggaccaaactgaaaaaataaaataagtt 19464620  T
Q  275 aagagaccgggggatgtattaa 296  Q
    | |  || || |||||||||||    
T  19464619 acggaactggtggatgtattaa 19464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 303
Target Start/End: Original strand, 40812652 - 40812734
Alignment:
Q  219 aaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    ||||||||||| ||||||||||||||| |||| | |||  ||||||||||||||||||| ||||  |||||||||||| ||||||    
T  40812652 aaccaaattgagacacttaatagttaagggaccaaactaggaaaataaaataagttaagggacc--gggatgtattaagccaaaa 40812734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 49141434 - 49141563
Alignment:
Q  116 ataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagattta 215  Q
    ||||||||||||||||| || || ||||  |||||||||||||| |||| | |||||| ||||||||| ||||| |||   |||||| |  ||| | |||    
T  49141434 ataaggtctatggtggaacaactttaaatatggttcaccttagacatttgatgttaaaaactaacggagatgactaaaatggtaaacggcagaaaaatta 49141533  T
Q  216 tggaaccaaattgacacacttaatagttaa 245  Q
    ||| ||||| |||| |||||||||||||||    
T  49141534 tgggaccaatttgaaacacttaatagttaa 49141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 30743161 - 30743085
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| ||||||||||| |||| ||| ||||||| |||||||||||||  ||||||| ||||||||||    
T  30743161 accaaattgaaacatttaatagttaagggaccacattgagaaattaaaataagttaaaggaccgggagatgtattaa 30743085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 43808563 - 43808639
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||| ||||||||||| |||||||||||||| |||||  |||||||||||    
T  43808563 accaaattgaaacgtttaatagttaagggaccacactgagaaattaaaataagttaagggaccgaaggatgtattaa 43808639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 9415804 - 9415737
Alignment:
Q  114 taataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacg 181  Q
    |||||||||  |||||||||||||||| | | |||||||||||||||||||| ||||||| |||||||    
T  9415804 taataaggtgcatggtggaccacctatgatgctggttcaccttagatatttatggttaaaaactaacg 9415737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 44977404 - 44977321
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaat 194  Q
    |||||||||||| || |||||||||||| ||||  |||||||||||||| |||| | |||||| |||||| || ||||||||||    
T  44977404 atttaataaggtttacggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagatgaccaaat 44977321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 23082059 - 23082141
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||| ||||||| |||||||||||||| ||||  |||||||| ||||||||||   |||||| ||||||||||| |||||||    
T  23082059 atttattaaggtccatggtggaccacctttaaatatggttcactttagatatttggtgttaaaaactaacggaaaggaccaaa 23082141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 29001062 - 29001136
Alignment:
Q  118 aaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaa 192  Q
    ||||||||||||||||||| |||||  ||||| ||| ||||||||||| ||||||| | ||||||||| ||||||    
T  29001062 aaggtctatggtggaccacatataatattggtccactttagatatttatggttaaaaattaacggaaaggaccaa 29001136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 21246532 - 21246593
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| |||| | ||||||||| |||||||||||||| ||||||| ||||||||||    
T  21246532 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaa 21246593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 51299461 - 51299384
Alignment:
Q  116 ataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||||||||||||||| || ||||||  |||||| ||||||| ||||||| ||| ||||||  |||||||    
T  51299461 ataaggtctatggtggaccacctacaatgttggtctaccttaaatatttagggttaaaaactgacggaagggaccaaa 51299384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 22766760 - 22766835
Alignment:
Q  118 aaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||| |||||||||||||| ||||  |||||||| ||||||||||   |||||| ||||||||||| |||||||    
T  22766760 aaggtccatggtggaccacctttaaatatggttcactttagatatttggtgttaaaaactaacggaaaggaccaaa 22766835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 26056080 - 26056213
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||| || |||||||| ||||||| ||||  |||||||| |||||  ||| | ||||||  |||||||| | |||||||  |||||||     |||    
T  26056080 atttaatacggcctatggtgaaccacctttaaatatggttcactttagacttttgatgttaaaatctaacggagaggaccaaaatagtaaacgacaaaag 26056179  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| |||||| |||||||    
T  26056180 atttatgggaccaaattgagacactttatagtta 26056213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 13930513 - 13930577
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactagtccc-tccatgatccaatggttttcatttt 75  Q
    ||||||||||||||||| | |||||| |||| ||| ||| |||||||||||| ||||||||||||    
T  13930513 attaggtgtttgtggttcaatataagctacaatagacccctccatgatccaacggttttcatttt 13930577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 14071042 - 14071106
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactagtccc-tccatgatccaatggttttcatttt 75  Q
    ||||||||||||||||| | |||||| |||| ||| ||| |||||||||||| ||||||||||||    
T  14071042 attaggtgtttgtggttcaatataagctacaatagacccctccatgatccaacggttttcatttt 14071106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 34258644 - 34258704
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||||||||| ||||||||||| | || || |||||| |||||||||||||| ||||||||    
T  34258644 ttaataaggtttatggtggaccgcatacaatgttggtccaccttagatattttaggttaaa 34258704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 40811435 - 40811403
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaa 143  Q
    |||||||||||||||||||||||||||||||||    
T  40811435 atttaataaggtctatggtggaccacctataaa 40811403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 51300192 - 51300252
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||||||||||||||||||||||| | ||| |||||| |||||| || | |||||||||||    
T  51300192 ttaataaggtctatggtggaccacttttaatgttggtccacctttgacacttaaggttaaa 51300252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 52742912 - 52743000
Alignment:
Q  114 taataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaac 202  Q
    |||| |||||||||||| ||||||| ||||  |||||||||||| | |||| | |||||| ||||||||| | ||||| | ||||||||    
T  52742912 taattaggtctatggtgtaccacctttaaacatggttcaccttaaacatttgatgttaaaaactaacggagaggaccataacagtaaac 52743000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 13641374 - 13641307
Alignment:
Q  177 taacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||| |||||||||  ||||||| |  |||||||||||| |||||||||| |||||| |||||||    
T  13641374 taacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 13641307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 2971797 - 2971715
Alignment:
Q  196 agtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaa-aataaaataagttaag 277  Q
    |||||||||||||| | |||||| |||||||||| |||||| |||||||  |||||| | ||| || || |||||||||||||    
T  2971797 agtaaacagaggaaaaattatgggaccaaattgagacactttatagttagaggactaaagtgaaaataaaaaaataagttaag 2971715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 16757454 - 16757516
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    ||||||||||||||||| |||||||| ||||| |||||| || |||||| ||||  |||||||    
T  16757454 atttaataaggtctatgatggaccacttataatgttggtccatcttagacatttgtggttaaa 16757516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 50678546 - 50678464
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||| ||||||||||| ||||||| ||||  ||||||||||||||  ||| | |||||| |||||| || | |||||||    
T  50678546 atttaatacggtctatggtgaaccacctttaaatatggttcaccttagagttttgatgttaaaaactaacagagaggaccaaa 50678464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 22169295 - 22169340
Alignment:
Q  254 actgagaaaataaaataagttaagagaccgggggatgtattaaacc 299  Q
    ||||||||| |||||||||||||| ||| ||| |||||||||||||    
T  22169295 actgagaaattaaaataagttaagggactgggagatgtattaaacc 22169340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 26054984 - 26054947
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  26054984 gaagatttatggaaccaaattgaaacactttatagtta 26054947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 148
Target Start/End: Complemental strand, 34653540 - 34653511
Alignment:
Q  119 aggtctatggtggaccacctataaagttgg 148  Q
    ||||||||||||||||||||||||||||||    
T  34653540 aggtctatggtggaccacctataaagttgg 34653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 49139920 - 49139851
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||| || ||||||  ||||||| | ||||||||||||  |||||||||| |||||| |||||||    
T  49139920 actaacggagattaccaaaatagtaaactgcggaagatttatgagaccaaattgagacactttatagtta 49139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 51218899 - 51218980
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaa 192  Q
    |||||||||||  |||||||||||| || ||||  |||||||| ||||| |||| | |||||| ||||||||| | ||||||    
T  51218899 atttaataaggcatatggtggaccatctttaaatatggttcactttagacatttgatgttaaaaactaacggagaggaccaa 51218980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 27689464 - 27689384
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||||||||| ||| |||||||||| ||||  |||||||| ||||| ||||   |||||| ||||||||| | |||||||    
T  27689464 ttaataaggtccatgatggaccacctttaaatatggttcactttagacatttggtgttaaaaactaacggagaggaccaaa 27689384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 48332832 - 48332732
Alignment:
Q  177 taacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaa 276  Q
    |||| |||| |||||| | ||||||| || ||  |||||| | |||||||||| ||| ||||||||||| |||||  | |||||| | ||||||||||||    
T  48332832 taacagaaaggaccaactaagtaaacggaagagtatttataggaccaaattgaaacatttaatagttaagggactgaagtgagaagaaaaaataagttaa 48332733  T
Q  277 g 277  Q
    |    
T  48332732 g 48332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 1e-64; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 300 - 519
Target Start/End: Complemental strand, 3019034 - 3018832
Alignment:
Q  300 aaaactaaacaaccattttacaagagggtcaaagatgcccctaattgttacaatgacttagtcatgcattgataataattcataatttggacaagtgaag 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||   ||||| ||||||||    
T  3019034 aaaactaaacaaccattttacaagagggtcaaagatgcccctaattgttacaatgacttagtcatgcat-gataataattgat---ttggagaagtgaag 3018939  T
Q  400 atgtaagtccaaatccgttgcataatagcagatattttgttggattaaaatttgtgagattttcttttttaaccatccaatcttttcattttgcgtgtct 499  Q
    ||||||||| ||             |||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  3018938 atgtaagtcaaa-------------tagcagatattttgttggattaaaatttgtgagattttcagttttaatcatccaatcttttcattttgcgtgtct 3018852  T
Q  500 tacaacaattcagattatat 519  Q
    ||||||| ||||||||||||    
T  3018851 tacaacagttcagattatat 3018832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 50530686 - 50530520
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | |||| ||||||||||||  |||||||    ||||    
T  50530686 atttaataaggtctatggtggactacctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacgatagaag 50530587  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    | |||||| ||||  |||| ||||||||||||||| |||| | ||||||||||||||||||||||||    
T  50530586 agttatgggaccattttgagacacttaatagttaaaggaccaaactgagaaaataaaataagttaag 50530520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 34438587 - 34438404
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagat 212  Q
    ||||||||||||||||||||| | |||||| ||| || |||| |||| |||| |||||||| |||||| || |  ||||||  ||||||| |  ||||||    
T  34438587 ttaataaggtctatggtggactatctataatgttagtccaccatagacatttgaggttaaaaactaacagagagaaccaaaatagtaaacggcagaagat 34438488  T
Q  213 ttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||| |||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  34438487 ttatgggaccaaattgagacactttatagttaagggactaaactgagaaaataaaataagttaagagatcgggagatgtattaa 34438404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 6140293 - 6140411
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||    ||||    
T  6140293 atttaataaggtctatggtggactacctataaagttggttcaccttagatatttaaggttaaaaactaacggaaatgaccaaaatagtaaacgacagaag 6140392  T
Q  211 atttatggaaccaaattga 229  Q
    | |||||||||||||||||    
T  6140393 agttatggaaccaaattga 6140411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 111 - 301
Target Start/End: Complemental strand, 17319225 - 17319035
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| || |||| | |||||||||  |||||||||||||||||| ||||||||||||| ||||||||  | |||||||  |||||||    ||||    
T  17319225 atttaataaagtttatgatagaccacctaagaagttggttcaccttagacatttaaggttaaaaactaacggtgaagaccaaaatagtaaacgccagaag 17319126  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    ||||||||||||||||||| |||||| ||||||||  ||  | ||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  17319125 atttatggaaccaaattgaaacactttatagttaagagatcaaactgagaaattaaaataagttaagagaccgggtgatgtattaagccaa 17319035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 111 - 303
Target Start/End: Original strand, 38418950 - 38419142
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||| |||||  ||||||||||||||||||||  ||||||| |||| |  ||||| |||||| ||||||||| ||||| ||| |||||||| |  ||||    
T  38418950 atttagtaaggcatatggtggaccacctataaatatggttcatcttaaacgtttaatgttaaaaactaacggagatgactaaaacagtaaacggcagaag 38419049  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    | |||||  ||||||||||||||||||||| |||| | | || ||||||||||||||||||||||||  |||| ||||| |||||||||||||    
T  38419050 acttatgagaccaaattgacacacttaataattaaggaattaaactgagaaaataaaataagttaagtaaccgtgggatatattaaaccaaaa 38419142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 117 - 296
Target Start/End: Original strand, 43419314 - 43419493
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||| ||||||||||||||||||||| |||||||||||||| | ||||| ||||||| ||||||| ||  |||||||  ||  ||| |  ||||| |||     
T  43419314 taagatctatggtggaccacctataatgttggttcaccttatacatttatggttaaaaactaacgaaatagaccaaaataggtaacggcagaagagttaa 43419413  T
Q  217 ggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    || |||||||||| |||||| |||||||| |||| | |||||||||||||||||||||||| ||||||| ||||||||||    
T  43419414 gggaccaaattgagacactttatagttaagggacgaaactgagaaaataaaataagttaagggaccgggagatgtattaa 43419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 117 - 302
Target Start/End: Complemental strand, 44159262 - 44159077
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||| |||||||||||||||||||||  ||| ||||||||||||||||| | ||||| ||||||||| |||||||||  | ||||| |  ||||| || |    
T  44159262 taagatctatggtggaccacctataatattgtttcaccttagatatttaggattaaaaactaacggagatgaccaaaataataaacggcagaagagttgt 44159163  T
Q  217 ggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaa 302  Q
    ||||||||||||| |||||||||||||||  ||  | ||||| |||||||||||||||||  ||||||| ||| |||||| |||||    
T  44159162 ggaaccaaattgaaacacttaatagttaagagatcaaactgaaaaaataaaataagttaaaggaccgggagatatattaagccaaa 44159077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 140 - 296
Target Start/End: Original strand, 41349487 - 41349643
Alignment:
Q  140 taaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaat 239  Q
    ||||||| |||||||||||| ||||||| ||||| |||||| |||| ||||| || ||||||  ||||||||||||||| | |||||||||||||||||     
T  41349487 taaagttagttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaatggaggaagatttatgggatcaaattgacacacttaaa 41349586  T
Q  240 agttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||| |||  | |||||||||||||||||||||||| |||||  | |||||||||    
T  41349587 agttaagggatcaaactgagaaaataaaataagttaagggaccgttgaatgtattaa 41349643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 38555209 - 38555342
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||||  | ||||||| |||||||    
T  38555209 atttaataaagtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaacggaaatgaccacgttagtaaacggaggaag 38555308  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | || ||  |||||||| | |||||| |||||||    
T  38555309 acttctgtgaccaaattaatacactttatagtta 38555342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 43708910 - 43708827
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  43708910 accaaattgaaacatttaatagttaatggactaaactgagaaattaaaataagttaagagaccgggggatgtattaagccaaaa 43708827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 34439657 - 34439783
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagtt 274  Q
    ||||||||| |||||||||  ||||||| |  |||||||||||| |||||||||| ||| || |||||||| |||| |||||||||||||||||||||||    
T  34439657 actaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagttaagggaccacactgagaaaataaaataagtt 34439756  T
Q  275 aagagaccgggggatgtattaaaccaa 301  Q
    ||| ||| | |||||||||||| ||||    
T  34439757 aagggactgagggatgtattaagccaa 34439783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 31712439 - 31712564
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| || | |||| |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||   |||||| || ||||    
T  31712439 atttaataaggtttacgatggatcacctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggaagaag 31712538  T
Q  211 atttatggaaccaaattgacacactt 236  Q
    | |||||| | |||||||| ||||||    
T  31712539 acttatgggatcaaattgaaacactt 31712564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 38417639 - 38417551
Alignment:
Q  208 aagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||  ||| || |||||||||||    
T  38417639 aagatttatgggaccaaattgacacacttaatagttaagggaccaaactgagaaaataaaataagttaaaggacaggaggatgtattaa 38417551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 41348329 - 41348237
Alignment:
Q  204 gaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| |||||| | |||||||||||||||||||||||| |||  | |||||||||||||||||||||||  |||| |||||||||||||    
T  41348329 gaggaagacttatgggatcaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaaaggaccaggggatgtattaa 41348237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 28102260 - 28102177
Alignment:
Q  110 tatttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||||||||||| || |||||| |||||||||||||| ||||||||||| ||||||||||||| |  ||||||||||||||||    
T  28102260 tatttaataaggtttacggtggatcacctataaagttgattcaccttagacatttaaggttaaaaataaacggaaatgaccaaa 28102177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 11114913 - 11115046
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| ||||||||| ||||||||| |||||||||||| |||||| ||||||||||||| ||||||||| | | |||||   ||||||    ||||    
T  11114913 atttaataaagtctatggtagaccacctacaaagttggttcagcttagacatttaaggttaaaaactaacggagaggtccaaaatggtaaacgacagaag 11115012  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||| |||||||||| | |||| |||||||    
T  11115013 agttatgggaccaaattgagatactttatagtta 11115046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 11482870 - 11482786
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaac 304  Q
    |||||||||| ||| ||||||||||| |||| | ||||||||| |||||||||||||| ||||||| |||||||||| |||||||    
T  11482870 accaaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaagccaaaac 11482786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 117 - 245
Target Start/End: Original strand, 26393066 - 26393194
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||  |||||| ||  |||||| || |||||   ||||||    ||||| ||||    
T  26393066 taaggtctatggtggaccacctataatgttggttcaccttagacatttagtgttaaaaacagacggaagtgtccaaaatggtaaacgacagaagagttat 26393165  T
Q  217 ggaaccaaattgacacacttaatagttaa 245  Q
    || |||||||||| |||||| ||||||||    
T  26393166 gggaccaaattgagacactttatagttaa 26393194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 244
Target Start/End: Original strand, 3533547 - 3533674
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||||||||||||||| ||||||| ||||||  |||||||| |||||  |||||| ||| ||||||| |||||||   ||||||||  ||||| ||||    
T  3533547 taaggtctatggtggaccgcctataatgttggtcgaccttagacatttagtgttaaaaactgacggaaaggaccaaaatggtaaacagtagaagagttat 3533646  T
Q  217 ggaaccaaattgacacacttaatagtta 244  Q
     | |||||||||| |||||| |||||||    
T  3533647 cggaccaaattgagacactttatagtta 3533674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 50531786 - 50531881
Alignment:
Q  208 aagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    |||| |||||| |||||||||| ||||||||||||||| |||  | | |||||||||||||||||||||| ||| | |||||||||||| ||||||    
T  50531786 aagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaagggacagtgggatgtattaagccaaaa 50531881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 38370461 - 38370383
Alignment:
Q  116 ataaggtctatggtggaccacctataaagttggttcaccttagata-tttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||| |||||||||||||||||| ||||||||||||||||||  | |||||||||||| ||||||||| |||||||||    
T  38370461 ataagatctatggtggaccacctacaaagttggttcaccttagtcattttaaggttaaaaactaacggagatgaccaaa 38370383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 26045191 - 26045130
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  26045191 ttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaa 26045130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 35787979 - 35787846
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| |||||||||||||||||| ||||  || || |||||||| |||| | |||||| ||||||||| | ||||||| | ||||||    ||||    
T  35787979 atttaataaagtctatggtggaccacctttaaacatgatttaccttagacatttgatgttaaaaactaacggagaggaccaaaacggtaaacgacagaag 35787880  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| ||| || |||||||    
T  35787879 atttatgggaccaaattgaaacattttatagtta 35787846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 47573701 - 47573762
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  47573701 ttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaa 47573762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 30682979 - 30683099
Alignment:
Q  130 ggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattga 229  Q
    ||||||||||||||||| ||||| |||| |||||||  |||||| ||||||||| | |||||||  | | ||| |  |||||||||||| ||||||||||    
T  30682979 ggaccacctataaagttagttcatcttaaatatttattgttaaaaactaacggagaagaccaaaagaattaacggccgaagatttatgggaccaaattga 30683078  T
Q  230 cacacttaatagttaatggac 250  Q
     |||||| |||||||| ||||    
T  30683079 gacactttatagttaagggac 30683099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 43709916 - 43709991
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  43709916 accaaattgaaacgtttaatagttaagggactacactgagaaattaaaataagttaagggacc-ggggatgtattaa 43709991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 29663819 - 29663692
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||    |||||||| || ||||   |||||| |  ||||| ||||    
T  29663819 taaggtttatggtggaccacctataatgttggttcaccttagacatttaatgttaaaattaaacggaaaagatcaaaatggtaaacggcagaagagttat 29663720  T
Q  217 ggaaccaaattgacacacttaatagtta 244  Q
    || |||||||||| ||| || |||||||    
T  29663719 gggaccaaattgagacaatttatagtta 29663692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 86970 - 86868
Alignment:
Q  127 ggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaat 226  Q
    |||||||||||| ||||  |||||||||||||| |||| | |||||| ||||||||| | ||||||| |||||||| |  ||| |||||||| |||||||    
T  86970 ggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaagaccaaaacagtaaacggcagaatatttatgggaccaaat 86871  T
Q  227 tga 229  Q
    |||    
T  86870 tga 86868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 303
Target Start/End: Complemental strand, 17494308 - 17494118
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagat 212  Q
    ||||||||||||||||||||| || | ||| |||| ||||| ||||| ||||||||||||| | ||||||| || |||||   ||||||| |   ||||     
T  17494308 ttaataaggtctatggtggactacttttaacgttgtttcacgttagacatttaaggttaaaaagtaacggagataaccaatatagtaaacggcataagac 17494209  T
Q  213 ttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
     || |  |||||||| | ||||||||||||||| |||| | | ||||||| |||||||| ||||  || | || ||| |||||||||||||    
T  17494208 ataagagaccaaattaaaacacttaatagttaagggaccaaaatgagaaattaaaataaattaatggatcaggagatatattaaaccaaaa 17494118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 6139120 - 6138995
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaata 270  Q
    |||||||||| || |||||||||  | ||||||    |||| |||||  |||||||||| ||| |||||| |||| |||| | |||||||||||||||||    
T  6139120 aaatactaacagagatgaccaaaataataaacaacataagagttatgagaccaaattgagacatttaataattaagggaccaaactgagaaaataaaata 6139021  T
Q  271 agttaagagaccgggggatgtattaa 296  Q
    ||||||| || ||| |||||||||||    
T  6139020 agttaagggatcggaggatgtattaa 6138995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 56296370 - 56296294
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||||||||||| |||||||||| | |||||| ||||||||| ||||| ||||||| || ||||||||| ||||||    
T  56296370 taaggtctatggtagaccacctatgatgttggtccaccttagacatttagggttaaaaacaaacggaaattaccaaa 56296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 43418106 - 43418031
Alignment:
Q  221 ccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||| |||||| |||||||| |||| | |||||||||||||||||| ||||  ||| ||||||||||||||    
T  43418106 ccaaattgaaacactttatagttaagggaccaaactgagaaaataaaataatttaaaggactgggggatgtattaa 43418031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 50498014 - 50498093
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaacc 299  Q
    |||||||||| ||  |||||| |||| |||| ||||||||||| |||||||||| ||| |||||| ||||||||||||||    
T  50498014 accaaattgaaacgtttaataattaagggaccacactgagaaattaaaataagtgaagggaccggaggatgtattaaacc 50498093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 56000464 - 56000337
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    ||||||||| |||||||||||||||| |||||| ||||||||| |||||  |||||| ||| | ||||| |||||||   |||||| |  ||||| ||||    
T  56000464 taaggtctacggtggaccacctataatgttggtccaccttagacatttagtgttaaaaactgatggaaaagaccaaaatggtaaacggcagaagagttat 56000365  T
Q  217 ggaaccaaattgacacacttaatagtta 244  Q
     | || ||||||| |||||| |||||||    
T  56000364 aggactaaattgagacactttatagtta 56000337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 2162793 - 2162733
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    ||||||||||||||||||||||||||| || ||||||  |||||| ||||||| |||||||    
T  2162793 ttaataaggtctatggtggaccacctaaaatgttggtcaaccttacatatttagggttaaa 2162733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 47572660 - 47572585
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| ||||||||||| ||||||  |||||||| |||||||||||||| || | |||||||||||||    
T  47572660 accaaattgaaacatttaatagttaagggactaagctgagaaattaaaataagttaagggatc-ggggatgtattaa 47572585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 6140198 - 6140249
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactag-tccctccatgatccaa 62  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  6140198 attaggtgtttgtggtttattataagctacaatagatccctccatgatccaa 6140249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 39592222 - 39592393
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| |||| |||||||||| ||||  ||| |||||||||| |||| | |||||| | ||||||| |  |||||| ||||||||    ||||    
T  39592222 atttaataaggtatatgatggaccacctttaaacatggctcaccttagacatttgatgttaaaaattaacggagagaaccaaaacagtaaacgacagaag 39592321  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagacc 282  Q
    |  ||  | ||||| |||| |||||| |||||||  |||||| | ||| || ||||||||||||||| ||||    
T  39592322 acataatggaccaatttgagacactttatagttaggggactaaagtgaaaacataaaataagttaagggacc 39592393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 11094707 - 11094576
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||||||| ||||| | ||||  ||||  |||||||| |||| | |||||| ||||||| | | ||||||| |||||||| |  |||     
T  11094707 atttaataaggtctatggtgaaccacatttaaacatggt--accttagacatttgatgttaaaaactaacgaagaggaccaaaacagtaaacggcagaaa 11094610  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||| | |||||||| | |||||| |||||||    
T  11094609 atttataggaccaaattaagacactttatagtta 11094576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 44160486 - 44160528
Alignment:
Q  254 actgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  44160486 actgagaaaataaaataagttaagggaccggaggatgtattaa 44160528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 5688630 - 5688703
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||||||| |||||||||  |||||||     |||||||||||||||||||||| |||||| |||||||    
T  5688630 aaatactaacggagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacactttatagtta 5688703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 33377357 - 33377430
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||||||| | |||||||  ||||||| |  |||||||||||| |||||||||| |||||| |||||||    
T  33377357 aaatactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 33377430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 47244047 - 47244108
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| |||| ||||||||||| |||||||| ||||| || || ||||||||||||    
T  47244047 ttaatagttaagggaccacactgagaaattaaaataaattaagggatcgagggatgtattaa 47244108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 47668530 - 47668663
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||| |||||||||||||||||| || |||   ||||| ||||||||||||| | |||||| |||||| || | ||||||| || ||||| |  || |    
T  47668530 atttaaaaaggtctatggtggaccatctttaaccatggtttaccttagatatttgatgttaaaaactaacagagaggaccaaaacaataaacggcagatg 47668629  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    || || || ||||| |||| |||||| |||||||    
T  47668630 atataagggaccaatttgagacactttatagtta 47668663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 52660147 - 52660280
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| || ||||||||| || | ||||| ||| ||||||| ||| ||||||||||||| || ||| ||||||| ||||   |||||| |  ||||    
T  52660147 atttaataaagtttatggtggatcatcaataaaattgattcacctaagacatttaaggttaaaaacaaacagaaatgatcaaaatggtaaacggcagaag 52660246  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| ||| |||| | | |||| |||||||    
T  52660247 atttatgggaccgaattaagatactttatagtta 52660280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 1189023 - 1188967
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    ||||||||| ||||||||||||| || ||||||||||| |||| ||||| |||||||    
T  1189023 taaggtctacggtggaccacctacaatgttggttcaccatagacatttagggttaaa 1188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 11113866 - 11113754
Alignment:
Q  170 taaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaat 269  Q
    |||| |||||||||||||||||||   |||||| |  ||||| |||||  |||||||||| |||||| |||||||| |||||| | ||| ||   |||||    
T  11113866 taaaaactaacggaaatgaccaaaatggtaaacggcagaagagttatgagaccaaattgagacactttatagttaagggactaaaatgaaaaccgaaaat 11113767  T
Q  270 aagttaagagacc 282  Q
    |||||||| ||||    
T  11113766 aagttaagtgacc 11113754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 48413593 - 48413669
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| | || |||||| |||| |||||||||||||| || || ||||||||||||    
T  48413593 accaaattgaaacgtttaatagttaaggaaccacactgggaaattaaaataagttaagggatcgagggatgtattaa 48413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 50497069 - 50496993
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| | ||| ||||||||||| | |||| ||||||||| ||||||||||| || ||| || |||||||||||    
T  50497069 accaaattaaaacatttaatagttaaggaactaaactgagaaattaaaataagttgagggactggaggatgtattaa 50496993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 5687298 - 5687219
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggac 250  Q
    ||||| ||||||| |||||||||  ||||||| |   ||||||||||| |||||||||| |||||| |||||||| ||||    
T  5687298 aaataataacggagatgaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttatagttaagggac 5687219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 44304978 - 44305037
Alignment:
Q  177 taacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacactt 236  Q
    ||||||| |||||||||  ||||||||| ||||||||||| | |||||||||| ||||||    
T  44304978 taacggagatgaccaaaatagtaaacagcggaagatttataggaccaaattgagacactt 44305037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 50530781 - 50530730
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactag-tccctccatgatccaa 62  Q
    |||||||||||||||||||||||||  |||| ||| ||||||||||||||||    
T  50530781 attaggtgtttgtggtttattataaactacaatagatccctccatgatccaa 50530730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 5417376 - 5417302
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| ||| ||||||||||| |||| | ||||| ||| |||||||||||||| ||||  | ||||||||||    
T  5417376 caaattgaaacatttaatagttaagggaccaaactgaaaaattaaaataagttaagggaccaagagatgtattaa 5417302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 277
Target Start/End: Original strand, 26059842 - 26059884
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    |||||||||||||||||| ||||||||| |||||||| |||||    
T  26059842 ttaatagttaatggactaaactgagaaattaaaataaattaag 26059884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 29687911 - 29687993
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||| || |||||||||||| ||||  |||||| || |||| |||| | |||||| ||||| ||| |||||||||    
T  29687911 atttaataaggtttacggtggaccacctttaaatatggttcgccgtagacatttgatgttaaaaactaaaggagatgaccaaa 29687993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 44302903 - 44302821
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||| ||||||||||| ||||||| ||||  | |||||||||||   ||||| |||||| ||||||||| | |||||||    
T  44302903 atttaatacggtctatggtgaaccacctttaaatatagttcaccttagtcttttaatgttaaaaactaacggagaggaccaaa 44302821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 44655893 - 44655823
Alignment:
Q  122 tctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaa 192  Q
    ||||||||||||||| |||||  ||||| ||| ||||||||||| ||||||| | ||| ||||| ||||||    
T  44655893 tctatggtggaccacatataatattggtccactttagatatttatggttaaaaattaatggaaaggaccaa 44655823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 47243026 - 47242964
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagacc 282  Q
    |||||||| | ||| ||||||||||| ||| || ||||||||| |||||||||||||| ||||    
T  47243026 accaaattaaaacatttaatagttaagggattaaactgagaaattaaaataagttaagggacc 47242964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 3528288 - 3528239
Alignment:
Q  196 agtaaacagaggaagatttatggaaccaaattgacacacttaatagttaa 245  Q
    |||||||||||||| | |||||| |||||||||| |||||| ||||||||    
T  3528288 agtaaacagaggaaaacttatgggaccaaattgagacactttatagttaa 3528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 13533193 - 13533254
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaat 174  Q
    ||||||||||||||||||||| | |||||| |||||| |||| |||| |||| | |||||||    
T  13533193 ttaataaggtctatggtggactatctataatgttggtccaccatagacatttgaagttaaat 13533254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 15787136 - 15787063
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagtt-ggttcaccttagatatttaaggttaaatactaacgga 183  Q
    ||||||||| ||  ||||| ||||||||| |||||| ||| ||||||||| ||||||||||||| | |||||||    
T  15787136 atttaataaagttcatggtagaccacctacaaagtttggtgcaccttagacatttaaggttaaaaattaacgga 15787063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 37559121 - 37559048
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||||||| |||||||||  ||||||| | | ||| ||||||| |||||||||| ||| || |||||||    
T  37559121 aaatactaacggagatgaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagtta 37559048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 40144718 - 40144657
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||||||| ||| || || ||| | ||||||||||||||||||||| | |||||||||||||    
T  40144718 tttaataaagtccatagtagactatctataaagttggttcaccttaaacatttaaggttaaa 40144657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 44503615 - 44503671
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    ||||||||| ||||||||| ||| || ||||||||||| |||| ||||| |||||||    
T  44503615 taaggtctacggtggaccatctacaatgttggttcaccatagacatttagggttaaa 44503671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 6e-63; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 110 - 296
Target Start/End: Original strand, 25570802 - 25570988
Alignment:
Q  110 tatttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||| |||  ||||||  ||||||    
T  25570802 tatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaagtttaaaaactaacggaaaggactaaaatagtaaatggaggaa 25570901  T
Q  210 gatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    || |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  25570902 gacttatggaatcaaattgaaacacttaatagttaagggactacactgagaaaataaaataagttaagggaccgaaggatgtattaa 25570988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 112 - 296
Target Start/End: Complemental strand, 14509391 - 14509207
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||||||| | |||||||  |||||||    |||||    
T  14509391 tttaataaggtctatggtggaccacctataaagttggtttaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgacagaaga 14509292  T
Q  212 tttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||| ||| |||| | |||||| |||||||| |||| | | |||||||||||||||||||||| || ||| |||||||||||    
T  14509291 tttatgggaccgaattaaaacactttatagttaagggaccaaagtgagaaaataaaataagttaagggatcggaggatgtattaa 14509207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 7983628 - 7983812
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| ||||||||||||||||| ||||  |||||||||||||| |||| | |||||| | | ||| ||| ||| ||| |||||||| |  ||||    
T  7983628 atttaataagatctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaattgacgaaaaggactaaaacagtaaacggtagaag 7983727  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||| | |||||||||||||||||||||||||| | | || |||||||||||||||||||||||| || | |||||||||||||    
T  7983728 acttataggaccaaattgacacacttaatagttaaggaattaaactgagaaaataaaataagttaagggatc-ggggatgtattaa 7983812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 117 - 296
Target Start/End: Original strand, 15850598 - 15850777
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||| |   |||||||  ||  |||||  ||||| ||||    
T  15850598 taagatctatggtggaccacctataatgttggttcaccttagacatttagggttaaaaactaacgaagtggaccaaaataggtaacagcagaagagttat 15850697  T
Q  217 ggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |  |||||||||| ||| || |||||||| |||  | ||| |||||||||||||||||||| ||||||||||||||||||    
T  15850698 gagaccaaattgaaacattttatagttaaaggagcaaactaagaaaataaaataagttaagggaccgggggatgtattaa 15850777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 7037149 - 7037008
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||   |||||| |  ||||    
T  7037149 atttaataaggtttacggtggatcacctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggcagaag 7037050  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggacta 252  Q
    | |||||| |||||||||| |||||| |||||||| ||||||    
T  7037049 acttatgggaccaaattgaaacactttatagttaagggacta 7037008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 118 - 277
Target Start/End: Original strand, 7490135 - 7490294
Alignment:
Q  118 aaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatg 217  Q
    ||||| ||||||||  ||| ||||||||| |||||||||||| ||||||||||||| ||||||||| | |||||||  ||||||||    ||||||||||    
T  7490135 aaggtttatggtgggtcacttataaagtttgttcaccttagacatttaaggttaaaaactaacggataagaccaaaatagtaaacaataaaagatttatg 7490234  T
Q  218 gaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    | |||||||||| ||| || ||| |||| |||| | ||||||||||||||||||||||||    
T  7490235 ggaccaaattgagacattttataattaaaggaccaaactgagaaaataaaataagttaag 7490294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 12959638 - 12959777
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||| | || ||||   |||||| |  ||||    
T  12959638 atttaataaggtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaagacaaacggagaggatcaaaaaggtaaacggcagaag 12959737  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggac 250  Q
    |||||| | || ||||||| |||||| || ||||| ||||    
T  12959738 atttatcggactaaattgagacactttattgttaagggac 12959777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 119 - 277
Target Start/End: Complemental strand, 4829640 - 4829482
Alignment:
Q  119 aggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatgg 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || | |||||||  |||||||     ||||||||||     
T  4829640 aggtctatggtggaccacctataaagttggtttaccttagatatttaaggttaaacactaacagagaggaccaaaatagtaaacgacataagatttatga 4829541  T
Q  219 aaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
     | |||||||| ||| || |||||||| |||||| | ||| ||   |||||||||||||    
T  4829540 gatcaaattgagacattttatagttaagggactaaagtgaaaacgaaaaataagttaag 4829482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 10367422 - 10367288
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||| | ||| |||   |||||| |  ||||    
T  10367422 atttaataaggtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagacgactaaaaaggtaaacggcagaag 10367323  T
Q  211 atttatggaaccaaattgacacacttaatagttaa 245  Q
    | |||||  || ||||||| |||||| ||||||||    
T  10367322 acttatgagactaaattgagacactttatagttaa 10367288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25570697 - 25570771
Alignment:
Q  1 gaagatggaggattaggtgtttgtggtttattataagatacactagtccctccatgatccaatggttttcatttt 75  Q
    |||||||||||||||||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||    
T  25570697 gaagatggaggattaggtgtttgtggtttattataagacacagcagtccctccgtgatccaatggttttcatttt 25570771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 37868973 - 37869112
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| || |||||| | |||||||   ||||||    ||||    
T  37868973 atttaataaggtctattgtggaccacctataaagttggctcaccttagacatttaaggttaaaaacaaacggagaagaccaaaaaggtaaacgacagaag 37869072  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggac 250  Q
    | |||||  || ||||||| |||||| |||||||| ||||    
T  37869073 acttatgagactaaattgagacactttatagttaagggac 37869112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 11575419 - 11575501
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||| || |||||||| |||||||    
T  11575419 atttaataaggtttatggtggatcacctataaagttgattcaccttagacatttaaggttaaaaacaaacggaaaggaccaaa 11575501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 35799695 - 35799529
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| ||||||||| |||||| |||||||||| ||||||||||| |||||||||||||  |||||||| | |||||||   |||||| || |||     
T  35799695 atttaataaagtctatggtagaccacttataaagttgattcaccttagacatttaaggttaaaagctaacggagaggaccaaagaggtaaacggaagaaa 35799596  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    | |||||  |||||||||| |||||| |||||||  |||||| | ||| ||   |||||||||||||    
T  35799595 agttatgagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaag 35799529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 12853069 - 12852936
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||| ||||||||||| ||||||| ||||  ||||||||||||||| ||| | ||||||  |||||||| |||||||||  |||||||    ||||    
T  12853069 atttaatacggtctatggtgaaccacctttaaatatggttcaccttagatttttgatgttaaaatctaacggagatgaccaaaatagtaaacgatagaag 12852970  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| |||||| |||||||    
T  12852969 atttatgggaccaaattgagacactttatagtta 12852936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 14510538 - 14510627
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||| | |||||||||| ||||||||||||||| |||||| ||| |||||||||||||||||||  |||||||| |||||||||    
T  14510538 gaagagttataggaccaaattgagacacttaatagttaagggactaaactaagaaaataaaataagttaaaggaccggggtatgtattaa 14510627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 296
Target Start/End: Original strand, 3533619 - 3533744
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaata 270  Q
    |||||||||||||||||| | ||  |||||||     ||||||||||  |||||||||||||||||||||||||| |||| | ||| | |||||||||||    
T  3533619 aaatactaacggaaatgatcgaaatagtaaacgacaaaagatttatgagaccaaattgacacacttaatagttaagggaccaaactaaaaaaataaaata 3533718  T
Q  271 agttaagagaccgggggatgtattaa 296  Q
    ||||||  |||||| | |||||||||    
T  3533719 agttaaaggaccggagaatgtattaa 3533744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 8537194 - 8537113
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||| |||||||||| ||||| || ||||||||| || |||||| ||||||||||||| ||||||||| |||||||||    
T  8537194 tttaataaagtctatggtgaaccacttaaaaagttggtacatcttagacatttaaggttaaaaactaacggagatgaccaaa 8537113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 28109807 - 28109884
Alignment:
Q  116 ataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||| | ||||||| | |||||||    
T  28109807 ataagatccatggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacggagaggaccaaa 28109884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 25569875 - 25569767
Alignment:
Q  188 accaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccggggg 287  Q
    |||||| || ||||| |||||||| |||||  ||||||||||||||  |||||||||| |||| | ||| | |||||||||||||||||  |||| ||||    
T  25569875 accaaaacaataaacggaggaagacttatgtgaccaaattgacacaagtaatagttaagggaccaaactaaaaaaataaaataagttaaaggacctgggg 25569776  T
Q  288 atgtattaa 296  Q
    |||||||||    
T  25569775 atgtattaa 25569767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 15850186 - 15850103
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    |||||||||| |||||| ||||||||  ||| | ||||| |||||||||||||||||| |||||||||||| ||||| ||||||    
T  15850186 accaaattgagacactttatagttaagagaccaaactgaaaaaataaaataagttaagggaccgggggatgcattaagccaaaa 15850103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 7982386 - 7982304
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaa 302  Q
    ||||||||||||||||| |||||||| |||  | |||||||||||||||||||||||  || |||| |||||||||| |||||    
T  7982386 accaaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaaaggatcgggagatgtattaagccaaa 7982304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 23177857 - 23177724
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| |||| |||| |||| || ||||  ||||||| ||||||| ||| | |||||| ||||||||| | |||||||   |||||| |  ||||    
T  23177857 atttaataagatctacggtgaaccatctttaaatatggttcatcttagattttttatgttaaaaactaacggagaggaccaaaatggtaaacggcagaag 23177758  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| |||||| |||||||    
T  23177757 atttatgggaccaaattgagacactttatagtta 23177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 23589114 - 23588981
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| |||| |||| |||| || ||||  ||||||| ||||||| ||| | |||||| ||||||||| | |||||||   |||||| |  ||||    
T  23589114 atttaataagatctacggtgaaccatctttaaatatggttcatcttagattttttatgttaaaaactaacggagaggaccaaaatggtaaacggcagaag 23589015  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| |||||| |||||||    
T  23589014 atttatgggaccaaattgagacactttatagtta 23588981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 14714673 - 14714593
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||  ||||||||||||||| ||||  |||||||||||||| |||| | |||||| ||||||||| | |||||||    
T  14714673 ttaataaggcgtatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaa 14714593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 277
Target Start/End: Complemental strand, 3532364 - 3532211
Alignment:
Q  124 tatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaacca 223  Q
    ||||||||||||||| ||||  |||||||||||| | |||||| |||||| |  ||| || ||||| |||  ||||||      |||| |||||  ||||    
T  3532364 tatggtggaccacctttaaatatggttcaccttaaacatttaatgttaaaaatcaacagagatgactaaaatagtaaatgacaaaagacttatgtgacca 3532265  T
Q  224 aattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    ||||||||||||||||| |||| |||  | ||||| |||||||||||| |||||    
T  3532264 aattgacacacttaataattaagggatcaaactgaaaaaataaaataaattaag 3532211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 6707033 - 6706976
Alignment:
Q  187 gaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||  ||||||| || ||||||||||||||||||||||| |||||| |||||||    
T  6707033 gaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagtta 6706976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 29424545 - 29424678
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||| |||||||||| ||||  ||||||| |||||| |||| | ||||   |||||| || | ||||||| || ||||| |  |||     
T  29424545 atttaataaggtctatgatggaccacctttaaacatggttcatcttagacatttgatgttagtaactaacagagaggaccaaaacaataaacggcagaat 29424644  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    ||| | || |||||||||| |||||| |||||||    
T  29424645 attcaagggaccaaattgaaacactttatagtta 29424678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 8538701 - 8538748
Alignment:
Q  254 actgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    |||||||||||||||||||||||| ||||||  |||||||||| ||||    
T  8538701 actgagaaaataaaataagttaagggaccggttgatgtattaagccaa 8538748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 33553407 - 33553486
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaacc 299  Q
    |||||||||| ||  |||||||||||  ||| | ||||| ||| |||||||||||||| || ||| ||||||||||||||    
T  33553407 accaaattgaaacgtttaatagttaagagaccaaactgaaaaattaaaataagttaagggatcggaggatgtattaaacc 33553486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 20630713 - 20630779
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggg 286  Q
    |||||||||| ||  ||||||||||| ||| || ||||||||| ||||||||||| || ||||||||    
T  20630713 accaaattgaaacgtttaatagttaagggattaaactgagaaattaaaataagtttagggaccgggg 20630779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 42027316 - 42027258
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattga 229  Q
    ||||||||||||||| |||||||  |||||||||  ||| |||||||| ||||||||||    
T  42027316 aaatactaacggaaaggaccaaagtagtaaacagcagaaaatttatgggaccaaattga 42027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 2581926 - 2581853
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||||||| | ||||||   ||||||| | | ||||||||||| |||||||||| |||||| |||||||    
T  2581926 aaatactaacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagtta 2581853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 28562740 - 28562793
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatattt 164  Q
    ||||||||||||||||||||||| | |||||| |||||| |||| || ||||||    
T  28562740 atttaataaggtctatggtggactatctataatgttggtccaccatatatattt 28562793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 45047524 - 45047447
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgac 189  Q
    |||| ||||||  |||||||||||||| ||||  |||||||||||||| |||| |  ||||| | |||||||||||||    
T  45047524 tttactaaggtacatggtggaccacctttaaatatggttcaccttagacatttgatattaaaaattaacggaaatgac 45047447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 3528198 - 3528246
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttaga 159  Q
    |||||||| ||||||||||| ||||||| ||||  ||||||||||||||    
T  3528198 atttaatacggtctatggtgaaccacctttaaatatggttcaccttaga 3528246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 4512287 - 4512207
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||  ||||||||||||| | | ||  ||||||||||||||||||| | |||||| ||||| ||| | |||||||    
T  4512287 ttaataaggcatatggtggaccactttttaatatggttcaccttagatatttgatgttaaaaactaatggagaggaccaaa 4512207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 26205194 - 26205114
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||  ||||||||||||| | |||   |||||||||||||| |||| | |||||| ||||||||| | |||||||    
T  26205194 ttaataaggcatatggtggaccacttttaagtatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaa 26205114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 40174761 - 40174821
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacact 235  Q
    ||||||||| |||||||||  ||||||||   |||||||||||| |||||||||| |||||    
T  40174761 actaacggagatgaccaaaatagtaaacaacagaagatttatgggaccaaattgaaacact 40174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 8e-53; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 12062317 - 12062502
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||  |||||||||   |||    
T  12062317 atttaataaggtatatggtggatcacctataaagttggttcaccttagacatttaaggttaaaaactaatggaaatgaccaaaatagtaaacagcaaaag 12062416  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | | |||| |||||||||| ||||||||||||||| |||| | ||||| |||||||||||||||||| |||||| |||||||||||    
T  12062417 agtaatgggaccaaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaagggaccggaggatgtattaa 12062502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 112 - 293
Target Start/End: Original strand, 48867364 - 48867545
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| || |||||||  || ||||    
T  48867364 tttaataaagtctatggtagaccacctacaaagttggttcaccttagacatttaaggttaaaaactaacagaaaggaccacattagtaaacgtagaaaga 48867463  T
Q  212 tttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtat 293  Q
     | |||| |||||||||||||||||||||||||| |||| | | |||||||||||||||||||||| |||||| ||||||||    
T  48867464 ctaatgggaccaaattgacacacttaatagttaagggaccaaattgagaaaataaaataagttaagggaccggaggatgtat 48867545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 23560002 - 23559817
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||||||| | |||||||  |||||||    ||||    
T  23560002 atttaataagatctatggtggaccacctataaagttggttcatcttagacaattaaggttaaaaactaacggagaggaccaaaatagtaaacgacagaag 23559903  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||||| | |||||||| |||||||||| |||| |||| | |||||||||||||||||||||||| |||||||| |||||||||    
T  23559902 aattatgggatcaaattgagacacttaataattaagggaccaaactgagaaaataaaataagttaagggaccggggaatgtattaa 23559817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 43346380 - 43346565
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||| ||  ||| |||||||||||    |||||    ||||    
T  43346380 atttagtaaggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacagacgaaaatgaccaaaatgataaacgacagaag 43346479  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||||  |||||||||||||||||||||||||| |||  | ||||||||||||||||||||||||  | |||||||||||||||    
T  43346480 agttatgagaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaaggtatcgggggatgtattaa 43346565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 117 - 277
Target Start/End: Complemental strand, 21128102 - 21127942
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||| ||  |||||||||||||||   |||||| |  ||||| ||||    
T  21128102 taaggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacagacggaaatgaccaaaatggtaaacggcagaagagttat 21128003  T
Q  217 ggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    || ||||||||||||||||||||||||||  ||  | ||||| ||||||||||||||||||    
T  21128002 gggaccaaattgacacacttaatagttaagagatcaaactgaaaaaataaaataagttaag 21127942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 35174315 - 35174481
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||  |||||||||||| | |||| ||||||||||||  |||||||    ||||    
T  35174315 atttaataaggtctctcgtggactacctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacgatagaag 35174414  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    | |||||| ||||  |||| ||||||||||||||| |||| | | ||| ||||||||||||||||||    
T  35174415 agttatgggaccattttgaaacacttaatagttaagggaccaaaatgaaaaaataaaataagttaag 35174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 48866260 - 48866139
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagtt 274  Q
    ||||||||| | ||||| || ||||||| || ||||| |||| | |||||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  48866260 actaacggagaggaccatattagtaaacggaagaagacttataggaccaaattgacacacttaatagttcagggactaaactgagaaaataaaataagtt 48866161  T
Q  275 aagagaccgggggatgtattaa 296  Q
    ||||||  |||| |||||||||    
T  48866160 aagagattggggtatgtattaa 48866139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 1031890 - 1031814
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  1031890 accaaattgaaacatttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaa 1031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 26798840 - 26798972
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||||||| || |||||||||||||||| ||||||||||| | |||   ||||||||||||| ||||||||| | |||||||   |||||| ||||||||    
T  26798840 tttaataaagtgtatggtggaccacctacaaagttggttcgctttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaacggaggaaga 26798939  T
Q  212 tttatggaaccaaattgacacacttaatagtta 244  Q
     |||||| |||||||||| ||| || |||||||    
T  26798940 attatgggaccaaattgagacattttatagtta 26798972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 8371403 - 8371237
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||| ||||||| |||||||||||||| |||    ||||| | |||||||||| | |||||| ||||||||| | |||||||  ||||||| |  ||||    
T  8371403 atttactaaggtccatggtggaccacctctaagtacggttcgctttagatatttgatgttaaaaactaacggagaggaccaaaatagtaaactgcagaag 8371304  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    ||||||||||||||||||| ||| || |||||||  |||| | | ||| || | |||||||||||||    
T  8371303 atttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataagttaag 8371237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 43345406 - 43345317
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||||| |||||||||| ||| || |||||||| ||||   |||||||||||||||||||||||| || | |||||||||||||    
T  43345406 gaagatttatgggaccaaattgaaacattttatagttaagggacctaactgagaaaataaaataagttaagggatctggggatgtattaa 43345317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 47765617 - 47765488
Alignment:
Q  115 aataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagattt 214  Q
    ||||||||||||||||||||| || |||   |||||||||| |||||||| | |||||| ||||||||| ||||||||| || ||||||  ||||||| |    
T  47765617 aataaggtctatggtggaccatctttaacaatggttcacctaagatatttgatgttaaaaactaacggagatgaccaaaacaataaacaacggaagatat 47765518  T
Q  215 atggaaccaaattgacacacttaatagtta 244  Q
    | || | ||| |||| |||||| |||||||    
T  47765517 aagggatcaatttgagacactttatagtta 47765488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 12060731 - 12060657
Alignment:
Q  221 ccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||| || | |||||||||||||    
T  12060731 ccaaattgagacacttaatagttaagagactaaactgagaaaataaaataagttaaggga-ctggggatgtattaa 12060657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 49333164 - 49333097
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaac 180  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||  |||||||| ||| ||||||    
T  49333164 ttaataaggtctatggtggaccacccataaagttgattcaccttagacgtttaaggtgaaaaactaac 49333097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 39530867 - 39530793
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| ||  ||||||||||| |||  ||||||||||| |||||||||||||| ||||||||||||||||||    
T  39530867 caaattgaaacgtttaatagttaagggatcacactgagaaattaaaataagttaagggaccgggggatgtattaa 39530793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 23561154 - 23561243
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||| | |||||||| | |||||||||| |||| |||  | |||||||||||||||||||||||| || |||||||||||||||    
T  23561154 gaagaattataggaccaaattaagacacttaataattaagggatcaaactgagaaaataaaataagttaagggatcgggggatgtattaa 23561243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 50150795 - 50150714
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    |||||||||| ||| |||||||||||  ||| | ||||||||| |||||||||||||| |||| ||||||||||||| ||||    
T  50150795 accaaattgaaacatttaatagttaagtgaccaaactgagaaattaaaataagttaagggacccggggatgtattaagccaa 50150714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 53808501 - 53808368
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| ||||||||||||||| || |  || ||||||||||| |||| | |||||| ||||| ||| |||||||||  |||||||     |||    
T  53808501 atttaataaggtttatggtggaccacctttagatatgattcaccttagaaatttgatgttaaaaactaatggagatgaccaaaatagtaaacgacataag 53808402  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||| ||||| |||||| |||||||    
T  53808401 atttatgggaccagattgagacactttatagtta 53808368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 19622183 - 19622055
Alignment:
Q  116 ataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagattta 215  Q
    |||||||||| |||||||||||| ||||  | |||||||||| | |||| | ||| || ||||||||| | ||||||| ||||||| ||  |||||||||    
T  19622183 ataaggtctacggtggaccacctttaaacatagttcaccttaaacatttgatgttgaaaactaacggagaggaccaaaccagtaaatagcagaagattta 19622084  T
Q  216 tggaaccaaattgacacacttaatagtta 244  Q
    ||  || ||||||| |||||| |||||||    
T  19622083 tgagactaaattgagacactttatagtta 19622055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 35173221 - 35173145
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| | ||||||||||||| |||  | | |||||||||||||||||||||| ||| ||||||||||||||    
T  35173221 accaaattgaaatacttaatagttaagggatgaaattgagaaaataaaataagttaagggactgggggatgtattaa 35173145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 11219613 - 11219480
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||| | ||||||||| ||||||| ||||  ||||||||||||||  ||| | ||||||  |||||||| |||||||||  ||||||| |  ||||    
T  11219613 atttaatacgatctatggtgaaccacctttaaatatggttcaccttagaattttgatgttaaaatctaacggagatgaccaaaatagtaaacggcagaag 11219514  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | | |||  |||||||||| |||||| |||||||    
T  11219513 actcatgagaccaaattgagacactttatagtta 11219480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 17350035 - 17350168
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||| |||||  ||||||||||||||| ||||  |||||||||||||| |||| | |||||| ||||||||| | |||||||  ||  |||||  ||||    
T  17350035 atttagtaaggcatatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaagaggtaacaggagaag 17350134  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |  || || |||||||||| |||||| |||||||    
T  17350135 acataagggaccaaattgagacactttatagtta 17350168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 45421287 - 45421230
Alignment:
Q  116 ataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||| ||||| |||||||    
T  45421287 ataaggtctatggtggaccacctctaatgttggttcatcttagacatttatggttaaa 45421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 2088916 - 2088840
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| |||||| |||| ||||   ||||||||| |||||||| ||||| ||||||||||||||||||    
T  2088916 accaaattgaaacatttaataattaagggacctaactgagaaattaaaataaattaagggaccgggggatgtattaa 2088840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 7921685 - 7921761
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||| |||||||||||||||  ||  | |||||||||| ||||||||||||| |||||| |||||||||||    
T  7921685 accaatttgagacacttaatagttaagtgatcaaactgagaaaacaaaataagttaagggaccggaggatgtattaa 7921761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 45730710 - 45730626
Alignment:
Q  221 ccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaact 305  Q
    ||||||||| ||  ||||||||||| |||| | ||||||||| |||||||||||||| |||| || |||||||||| || |||||    
T  45730710 ccaaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccaggagatgtattaagcctaaact 45730626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 48254828 - 48254884
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||||| ||||||||||||||||||| |||||| ||||||||| |||||| ||||||    
T  48254828 taaggtttatggtggaccacctataatgttggtccaccttagacatttaatgttaaa 48254884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 53901643 - 53901567
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| | ||| ||||||||||| |||||| ||||||||| |||||||| ||||| || ||||| |||||||||    
T  53901643 accaaattaaaacatttaatagttaagggactaaactgagaaattaaaataaattaagggatcggggtatgtattaa 53901567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 51825614 - 51825693
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggac 250  Q
    ||||||||||||| |||||||||  |||||||    |||||||||||| |||||||||| |||||| |||||||| ||||    
T  51825614 aaatactaacggatatgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagttaagggac 51825693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 32999869 - 32999795
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||| | ||| ||||||||||| |||| | ||||||||| |||||||||||||| |  |||||||||||||||    
T  32999869 caaattaaaacatttaatagttaagggaccaaactgagaaattaaaataagttaaggggtcgggggatgtattaa 32999795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 7483460 - 7483540
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||  |||||||| |||| | | ||  ||||||||||||||||||| | |||||| ||||||||| |||||||||    
T  7483460 ttaataaggcatatggtgggccactttttaatatggttcaccttagatatttgatgttaaaaactaacggagatgaccaaa 7483540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 40364503 - 40364443
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||||| |||||||||||||| | |||||| ||||||||||| |||| |||| ||||||||    
T  40364503 ttaatagggtctatggtggactatctataatgttggttcaccatagacattttaggttaaa 40364443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 31282470 - 31282521
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatattt 164  Q
    ||||||||||||| ||||||||||||| || |||||| ||||| ||||||||    
T  31282470 ttaataaggtctacggtggaccacctacaaggttggtccacctaagatattt 31282521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 35174221 - 35174272
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactag-tccctccatgatccaa 62  Q
    |||||||||||||||||||||||||  |||| ||| ||||||||||||||||    
T  35174221 attaggtgtttgtggtttattataaactacaatagatccctccatgatccaa 35174272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 32979271 - 32979189
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||| ||||||||||| ||||||| ||||  | |||||||||||   ||||| |||||| ||||||||| | |||||||    
T  32979271 atttaatacggtctatggtgaaccacctttaaatatagttcaccttagtcttttaatgttaaaaactaacggagaggaccaaa 32979189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 39133200 - 39133118
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||| |||||  ||||||||||||||| ||||  |||||||||||||| |||| | |||||| |||||| || | |||||||    
T  39133200 atttagtaaggcatatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagaggaccaaa 39133118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 39531858 - 39531920
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagacc 282  Q
    |||||||||| ||| || |||||||| ||| || ||||||||| |||||||||||||| ||||    
T  39531858 accaaattgaaacatttcatagttaagggattaaactgagaaattaaaataagttaagggacc 39531920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 46495678 - 46495636
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcacct 155  Q
    ||||||||||||||| ||||||||||| || ||||||||||||    
T  46495678 ttaataaggtctatgatggaccacctacaatgttggttcacct 46495636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 41386253 - 41386180
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||| ||||||| | |||||||  |||||||   | |||||||||||||||||||||| |||||| |||||||    
T  41386253 aaatagtaacggagaggaccaaaatagtaaacgtcgtaagatttatggaaccaaattgagacactttatagtta 41386180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 46690351 - 46690412
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| ||| ||  ||| |||| |||||||||||||| |||||| |||||||||||    
T  46690351 ttaatagttaagggattaagctgggaaattaaaataagttaagggaccggaggatgtattaa 46690412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 53420502 - 53420441
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    ||||||||||||||||||||| ||| | |||||||||| |||| |||| ||||  |||||||    
T  53420502 tttaataaggtctatggtggatcacttttaaagttggtccaccatagacatttgtggttaaa 53420441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 25583260 - 25583164
Alignment:
Q  148 gttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    |||| ||||||| ||||||||||||| | |||| || | |||||||  ||||||| |  ||||| |||||| |||||||||| ||  ||||||||||    
T  25583260 gttcgccttagacatttaaggttaaaaattaacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagtta 25583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 29536832 - 29536764
Alignment:
Q  176 ctaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| | |||||||  |||||||  | |||||||||||| |||||||||| |||||| |||||||    
T  29536832 ctaacggagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattgagacactttatagtta 29536764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 33000842 - 33000918
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||  | ||||||||| |||||||||||| | |||||||  |||||||||    
T  33000842 accaaattgaaacgtttaatagttaagggatcaaactgagaaattaaaataagttaggggaccgggaaatgtattaa 33000918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 5e-48; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 117 - 302
Target Start/End: Original strand, 12862857 - 12863042
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| | ||||||| | |||||||  |||||||||  ||||| ||||    
T  12862857 taaggtctatggtggaccacctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaacagcagaagagttat 12862956  T
Q  217 ggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaa 302  Q
     | |||||||||| ||||||||||||||| |||  | |||||||||||||||||||||||||||||| | |||||||||| |||||    
T  12862957 aggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagagaccgagagatgtattaagccaaa 12863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 117 - 302
Target Start/End: Original strand, 12830877 - 12831062
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| | ||||||| | |||||||  |||||||||  ||||| ||||    
T  12830877 taaggtctatggtggaccacctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaacagcagaagagttat 12830976  T
Q  217 ggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaa 302  Q
     | |||||||||| ||||||||||||||| |||  | |||||||||||||||||||||||| ||||| | |||||||||| |||||    
T  12830977 aggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggaccgagagatgtattaagccaaa 12831062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 32734314 - 32734131
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||| | |||| ||| | |||||||||||||||||||| ||||| |||||||||||||||||||  |||||||    ||||    
T  32734314 atttaataaggtctatggtggactatctattaaggttgttcaccttagatatttaagattaaaaactaacggaaatgaccaaaatagtaaacgacagaag 32734215  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||||| |||||||| | |||| |||||||||| |||| | ||||| |||||||||||||||||  |||| |||||||||||||    
T  32734214 agttatgggaccaaattaagacac-taatagttaagggaccaaactgaaaaaataaaataagttaaaggacc-ggggatgtattaa 32734131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 223409 - 223276
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||| ||||| ||||| ||||| || ||||||| |||||||    
T  223409 atttaataaagtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaatggaaaggaccacattagtaaacggaggaag 223310  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||| |||||||| | |||||| |||||||    
T  223309 acttatgggaccaaattaatacactttatagtta 223276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 2167448 - 2167576
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| || | |||||||  | ||||| |  ||||    
T  2167448 atttaataaggtctatggtggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacagaga-gaccaaaataataaacggcagaag 2167546  T
Q  211 atttatggaaccaaattgacacacttaata 240  Q
    |||||||| |||||||||| ||||||||||    
T  2167547 atttatgggaccaaattgaaacacttaata 2167576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 42510295 - 42510112
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagat 212  Q
    ||||||||||||||||||||| | | |||| ||| || |||| |||| |||| |||||||| ||||||||| |  ||||||  ||||||| |  ||||||    
T  42510295 ttaataaggtctatggtggactatcaataatgttagtgcaccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaacggcagaagat 42510196  T
Q  213 ttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||| |||||||||| |||||| |||||||| |||| | ||||| |||||||||||| ||||| || | |||||||||||||    
T  42510195 ttatgggaccaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggatcaggggatgtattaa 42510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 40058201 - 40058067
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||| ||||||||| |||||||||   |||||| |  ||||    
T  40058201 atttaataaggtctatggtggactacttataaagttggttcaccttagacatttaagattaaaaactaacggagatgaccaaaatggtaaacggcagaag 40058102  T
Q  211 atttatggaaccaaattgacacacttaatagttaa 245  Q
    | |||||  ||||| |||| |||||||||||||||    
T  40058101 agttatgagaccaatttgaaacacttaatagttaa 40058067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 5383125 - 5383000
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| | || ||||  |||||||     |||    
T  5383125 atttaataaggtctatggtggaccacctataaagttgattcaccttagacatttaaggttaaaaactaacggagaggatcaaaatagtaaacgaccaaag 5383026  T
Q  211 atttatggaaccaaattgacacactt 236  Q
    |||||||| |||||||||| ||||||    
T  5383025 atttatgggaccaaattgagacactt 5383000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 38471469 - 38471333
Alignment:
Q  114 taataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatt 213  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||| | |||| || |  ||||||  ||||||| || |||||||    
T  38471469 taataaagtctatggtagaccacctataaagttggttcaccttaaacatttaaggttaaaaattaacagagagaaccaaaatagtaaacggaagaagatt 38471370  T
Q  214 tatggaaccaaattgacacacttaatagttaatggac 250  Q
    |||||||||||||||| ||| || | |||||| ||||    
T  38471369 tatggaaccaaattgaaacaatttaaagttaagggac 38471333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 7426824 - 7426658
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||||||||||||||| ||||  || ||||||||||| |||| | |||||| | | ||||||| ||  ||| |||||||  |  | ||    
T  7426824 atttaataaggtctatggtggaccacctttaaatatgattcaccttagacatttgatgttaaaaattgacggaaaggaataaaacagtaaatggcagtag 7426725  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    | ||||||||||| |||||||||||||||| |||| ||| || ||| |||||||||||||| |||||    
T  7426724 acttatggaaccatattgacacacttaataattaagggattaaactaagaaaataaaataaattaag 7426658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 19525221 - 19525354
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| || |||||| | |||||||   |||||| |  ||||    
T  19525221 atttaataaggtctatggtggaccacatataaagttggttcaccatagaaatttaaggttaaaaacaaacggagaggaccaaaatggtaaacggcagaag 19525320  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||  ||||||| || |||||| |||||||    
T  19525321 acttatgtgaccaaatggagacactttatagtta 19525354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 15856710 - 15856584
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||| || |||| |||||||||||   |||||| |  ||||| ||||    
T  15856710 taaggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacaaacgaaaatgaccaaaatggtaaacggcagaagagttat 15856611  T
Q  217 ggaaccaaattgacacacttaatagtta 244  Q
    || | |||||||| ||||||||||||||    
T  15856610 gg-atcaaattgatacacttaatagtta 15856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 11907203 - 11907286
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    |||||||||| ||| ||||||||||| |||| | ||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  11907203 accaaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggggatgtattaagccaaaa 11907286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 22819456 - 22819564
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||| ||||| ||||||||||||| | ||||||||||||||||||| || ||||||| ||||||||| |||||||||  ||||||| |  ||||| ||||    
T  22819456 taagatctatagtggaccacctatcatgttggttcaccttagatatatagggttaaaaactaacggagatgaccaaaatagtaaacggcagaagagttat 22819555  T
Q  217 ggaaccaaa 225  Q
    || ||||||    
T  22819556 gggaccaaa 22819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 12933934 - 12933801
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| ||||||||| |||||||||||||| |||| | |||||||||||||||||| |  |||||||| |||| ||   |||||| |  ||||    
T  12933934 atttaataaggtttatggtggatcacctataaagttgattcatcatagatatttaaggttaaaaataaacggaaaggaccgaaatggtaaacggcagaag 12933835  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||  | |||||||| |||||| |||||||    
T  12933834 acttatgagatcaaattgagacactttatagtta 12933801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 15857648 - 15857725
Alignment:
Q  208 aagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccggg 285  Q
    ||||||||||| | |||||||| |||||| |||||||| |||| | |||||||||||||||||||||||| |||||||    
T  15857648 aagatttatgggaacaaattgaaacactttatagttaagggaccaaactgagaaaataaaataagttaagggaccggg 15857725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 22819578 - 22819667
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||||| |||||||||| ||||||||||||||| |||  | | |||||||||||||||||||||| | ||||| ||||||||||    
T  22819578 gaagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaaggggccgggagatgtattaa 22819667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 8188197 - 8188304
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagtt 274  Q
    ||||||||| | |||||  | ||||||  |||||||| |||| | |||||||||||||||||||||||||| |||  | ||||| |||||||||||||||    
T  8188197 actaacggagaggaccacgttagtaaatggaggaagacttataggaccaaattgacacacttaatagttaaaggatcaaactgaaaaaataaaataagtt 8188296  T
Q  275 aagagacc 282  Q
    ||| ||||    
T  8188297 aagggacc 8188304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 12948095 - 12948016
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgacc 190  Q
    |||||||||||| ||||||||| |||||||||||||| |||| | |||||||||||||||||| |  |||||||| ||||    
T  12948095 atttaataaggtttatggtggatcacctataaagttgattcatcatagatatttaaggttaaaaataaacggaaaggacc 12948016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 39134743 - 39134665
Alignment:
Q  218 gaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||||| ||  ||||||||||| |||| | ||||||||  |||||||||||||| ||||||||||||||||||    
T  39134743 gaaccaaattgaaacgtttaatagttaagggaccaaactgagaatttaaaataagttaagggaccgggggatgtattaa 39134665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 42511695 - 42511784
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||||||| |||||||| |||||| |||||||| |||| | ||||| |||||||||||| ||||| |||  ||| |||||||||    
T  42511695 gaagatttatggaagcaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggactagggaatgtattaa 42511784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 24070479 - 24070403
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||  ||||||||||| |||||||| ||||| ||||||||||||||||||    
T  24070479 accaaattgaaacgtttaatagttaagggatcacactgagaaattaaaataaattaagggaccgggggatgtattaa 24070403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 30253693 - 30253605
Alignment:
Q  187 gaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagtta 275  Q
    |||||| | ||||||  |||||||| |||||  |||||||||||||||||||||||| | |||| ||||||| ||||||||| ||||||    
T  30253693 gaccaactaagtaaatggaggaagacttatgagaccaaattgacacacttaatagttgagggaccacactgaaaaaataaaacaagtta 30253605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 19826052 - 19825975
Alignment:
Q  116 ataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||||||||||||||| ||| ||||| ||||||  |||||| ||||||| ||||||| |||||||||  ||||||||    
T  19826052 ataaggtctatggtggatcacatataatgttggtctaccttatatatttatggttaaaaactaacggatttgaccaaa 19825975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 224587 - 224711
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagtt 274  Q
    ||||||||| ||||| | || ||||| | |||||||| |||||  |||||||||| |||||| |||||||  |||| | | ||| || ||||||||||||    
T  224587 actaacggagatgactacattagtaatcggaggaagacttatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacataaaataagtt 224686  T
Q  275 aagagaccgggggatgtattaaacc 299  Q
    ||| |||| |  |||||||||||||    
T  224687 aagggaccagatgatgtattaaacc 224711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 32734409 - 32734345
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactag-tccctccatgatccaatggttttcatttt 75  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||| | ||||||    
T  32734409 attaggtgtttgtggtttattataagctacaatagatccctccatgatccaacggtctccatttt 32734345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 12934029 - 12933966
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactag-tccctccatgatccaatggttttcattt 74  Q
    ||||||| |||||||||||||||||| |||| ||| |||||||||||||||| ||| |||||||    
T  12934029 attaggtctttgtggtttattataagttacaatagatccctccatgatccaacggtcttcattt 12933966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 12948190 - 12948127
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactag-tccctccatgatccaatggttttcattt 74  Q
    ||||||| |||||||||||||||||| |||| ||| |||||||||||||||| ||| |||||||    
T  12948190 attaggtctttgtggtttattataagttacaatagatccctccatgatccaacggtcttcattt 12948127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 24761765 - 24761820
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    |||||||| |||||||||| |||| |||||| ||| ||||||||||||||||||||    
T  24761765 caaattgagacacttaataattaagggactaaactaagaaaataaaataagttaag 24761820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 41906334 - 41906401
Alignment:
Q  114 taataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacg 181  Q
    |||||||||  |||||||| ||||||| | | |||||||||||||||||||| ||||||| |||||||    
T  41906334 taataaggtgcatggtggatcacctatgatgctggttcaccttagatatttatggttaaaaactaacg 41906401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 24761662 - 24761620
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcac 153  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  24761662 atttaatacggtttatggtggaccacctataaagttggttcac 24761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 301
Target Start/End: Original strand, 32735472 - 32735602
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaata 270  Q
    |||||||||| || |||||||||  | ||||| |  ||||| |||||| |||||||| | ||| |||||| |||| |||  | | |||||||||||||||    
T  32735472 aaatactaacagagatgaccaaaataataaacggcagaagagttatgggaccaaattaaaacatttaataattaagggatcaaattgagaaaataaaata 32735571  T
Q  271 agttaagagaccgggggatgtattaaaccaa 301  Q
     |||||| || ||| ||||||||||| ||||    
T  32735572 tgttaagggatcggaggatgtattaagccaa 32735602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 5384343 - 5384412
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||| | |||||||  ||||||| || |||||||||||| |||||||||| |||||| |||||||    
T  5384343 actaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaaattgagacactttatagtta 5384412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 8187236 - 8187176
Alignment:
Q  223 aaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgg 284  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||||||| ||||| ||||||    
T  8187236 aaattgacacatttaatagttaa-ggattaaactgagaaaataaaataaattaagggaccgg 8187176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 29221252 - 29221188
Alignment:
Q  231 acacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||||||| | || | ||||||||| ||||||||||||| |||| ||||||||||||||    
T  29221252 acacttaatagttaa-gaaccaaactgagaaattaaaataagttaaaagactgggggatgtattaa 29221188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 39135690 - 39135771
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    |||||||||| ||| ||||||||||| |||  | ||||||||| |||||||||||||  |||||| |||| |||||| ||||    
T  39135690 accaaattgaaacatttaatagttaagggagcaaactgagaaattaaaataagttaaaggaccggaggatctattaagccaa 39135771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 21006214 - 21006138
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||||||| |||| |||||| |||||| | |||||| | ||||||||||||| |||| | | |||||||||    
T  21006214 accaaattgacacatttaaaagttaagggactaaagtgagaagaaaaaataagttaagggacctgcgtatgtattaa 21006138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 22019343 - 22019295
Alignment:
Q  127 ggtggaccacctataaagttggttcaccttagatatttaaggttaaata 175  Q
    ||||||| |||||||| |||||||||||||||| |||| ||||||||||    
T  22019343 ggtggacaacctataatgttggttcaccttagaaatttgaggttaaata 22019295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 15613622 - 15613555
Alignment:
Q  177 taacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||| | |||||||  ||||||| || |||||||||||| |||||||||| |||||| |||||||    
T  15613622 taacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacactttatagtta 15613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 10085838 - 10085912
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaa 245  Q
    ||||||||||||| | |||||||  |||||| ||  |||||||||||| |||||||||| |||||| | ||||||    
T  10085838 aaatactaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacactttaaagttaa 10085912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 8284286 - 8284343
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    |||||||| | ||| |||||||||||  ||||| ||||||||| ||||||||||||||    
T  8284286 accaaattaaaacatttaatagttaagagactaaactgagaaattaaaataagttaag 8284343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 12861604 - 12861547
Alignment:
Q  239 tagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||| |||| | |||||||||||||||||||||||| |||  | |||||||||||    
T  12861604 tagttaagggaccaaactgagaaaataaaataagttaagggacgagaggatgtattaa 12861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 21387820 - 21387687
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||| || |||||||| ||||||| ||||  || |||||||||||  ||| | |||||| |||||| || | |||||||  ||  ||| |  ||||    
T  21387820 atttaatacggcctatggtgaaccacctttaaatatgtttcaccttagagttttgatgttaaaaactaacagacaggaccaaaagaggtaacggcagaag 21387721  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| ||| || |||||||    
T  21387720 atttatgggaccaaattgagacattttatagtta 21387687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 11906414 - 11906354
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtatta 295  Q
    ||||||||||| |||| | ||||||||| ||| ||||||||||  |||||| |||||||||    
T  11906414 ttaatagttaagggaccaaactgagaaattaacataagttaaggaaccgggagatgtatta 11906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 21011850 - 21011926
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| ||||||||||| |||||  | |||||| | ||||||||||||| |||| | | |||||||||    
T  21011850 accaaattgaaacatttaatagttaagggactgaagtgagaagaaaaaataagttaagggacctgcgtatgtattaa 21011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 112 - 277
Target Start/End: Original strand, 13366984 - 13367149
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||  ||||||| |  |||||    
T  13366984 tttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacggagaggaccaaaatagtaaacggcagaaga 13367083  T
Q  212 tttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    ||||||| |||||||| | |||||| |||||||| |||| | | ||| ||||||||||||||||||    
T  13367084 tttatgggaccaaattaaaacactttatagttaagggaccaaagtgaaaaaataaaataagttaag 13367149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 111 - 301
Target Start/End: Complemental strand, 20308788 - 20308598
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||  |||||||    ||||    
T  20308788 atttaataaggtctatggcggactatctataaagttggttcaccttagacatttaaggttaaaaattaatggaaatgaccaaaatagtaaacgacagaag 20308689  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    | |||||  |||||||||| |||||||||||||||   |||| ||||||||||||||||||||||||||| |  |||||||||||| ||||    
T  20308688 agttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaagagatcaagggatgtattaagccaa 20308598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 111 - 301
Target Start/End: Complemental strand, 21095421 - 21095231
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||  |||||||    ||||    
T  21095421 atttaataaggtctatggcggactatctataaagttggttcaccttagacatttaaggttaaaaattaatggaaatgaccaaaatagtaaacgacagaag 21095322  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    | |||||  |||||||||| |||||||||||||||   |||| ||||||||||||||||||||||||||| |  |||||||||||| ||||    
T  21095321 agttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaagagatcaagggatgtattaagccaa 21095231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 8095529 - 8095345
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||  |||||||     |||    
T  8095529 atttaataaggtatatggtgcatcacctataaagttggttcaccttagacatttaagattaaaaactaacggaaaggaccaaaatagtaaacgacaaaag 8095430  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | | |||| |||||||||| ||||||||||||||| |||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  8095429 agtaatgggaccaaattgagacacttaatagttaagggaccaaactgagaaaataaaataagttaagggacc-ggggatgtattaa 8095345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 2421226 - 2421392
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||  | | |||||||  | ||||| |  ||||    
T  2421226 atttaataaggtctatgatggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacaaagaggaccaaaataataaacggcagaag 2421325  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    |||| ||| |||||||||| |||||||||| |||| |||||| ||||| ||| ||||||||||||||    
T  2421326 atttctgggaccaaattgaaacacttaatatttaagggactaaactgataaattaaaataagttaag 2421392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 22620019 - 22619893
Alignment:
Q  170 taaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaat 269  Q
    |||| |||||| |||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||  | ||||||||||||||||    
T  22620019 taaaaactaacagaaaagaccacattagtaaacagaggaagatttatgggaccaaattgacacacttaaaagttaagggatcaaactgagaaaataaaat 22619920  T
Q  270 aagttaagagaccgggggatgtattaa 296  Q
    |||||||| ||||| ||||||||||||    
T  22619919 aagttaagggaccgtgggatgtattaa 22619893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 110 - 244
Target Start/End: Complemental strand, 36070362 - 36070228
Alignment:
Q  110 tatttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||  | |||||||  ||||||| |  |||    
T  36070362 tatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaagactaacggggaggaccaaaatagtaaacggcagaa 36070263  T
Q  210 gatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||| | |||||||| |||||| |||||||    
T  36070262 gatttatgggatcaaattgagacactttatagtta 36070228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 34617128 - 34617313
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||| ||||||||| |||||||||||| ||| |||||| ||||||| | ||||| ||||||| ||| |||||||||||||||    ||||| || ||||    
T  34617128 atttagtaaggtctacggtggaccacctgtaatgttggtccaccttatacatttagggttaaaaactgacggaaatgaccaaaatgataaacggaagaag 34617227  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |  ||||| || |||||||||||||||||||||||||||  | |||| ||||| |||| |||||||| |||||||| |||||||||    
T  34617228 agctatgggactaaattgacacacttaatagttaatggatcaaactgggaaaaaaaaaaaagttaagggaccggggaatgtattaa 34617313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 44606322 - 44606189
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| | || ||||  | |||||||| ||||    
T  44606322 atttaacaaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaatggagaggatcaaaataataaacagaagaag 44606223  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| |||||||||| |||||  |||||||    
T  44606222 atttatgggaccaaattgaaacactatatagtta 44606189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 35944091 - 35943973
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||||  ||||||| |   |||    
T  35944091 atttaataagatctatggtggatcacctataaagttggttcaccttagacatttaaagttaaaaactaacggagatgaccaaaatagtaaactgcataag 35943992  T
Q  211 atttatggaaccaaattga 229  Q
    |||||||| ||||||||||    
T  35943991 atttatgggaccaaattga 35943973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 19913675 - 19913542
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||    ||||| |  ||||    
T  19913675 atttaataaagtctatggtggaccatctataaagttggttcaccttagaaatttaaggttaaaaactaacggagaggaccaaaatgataaaccgcagaag 19913576  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||| |||||||||| |||||| |||||||    
T  19913575 acttatgggaccaaattgaaacactttatagtta 19913542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 198 - 311
Target Start/End: Original strand, 22621154 - 22621267
Alignment:
Q  198 taaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaa 297  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||| |||  | |||||||||||||||||||||||| ||||| ||||||||||||     
T  22621154 taaacagaggaagacttatgggaccaaattgccacacttaatagttaagggatcaaactgagaaaataaaataagttaagggaccgagggatgtattaag 22621253  T
Q  298 ccaaaactaaacaa 311  Q
    ||||| | ||||||    
T  22621254 ccaaatcaaaacaa 22621267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 122 - 296
Target Start/End: Original strand, 41522632 - 41522806
Alignment:
Q  122 tctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaac 221  Q
    |||||| |||||||| | ||||  ||||||| |||| |||||| | |||||| | | ||||||| ||| ||| |||||||| |  ||||| |||| | ||    
T  41522632 tctatgctggaccacttttaaacatggttcatcttaaatatttgatgttaaaaattgacggaaaggactaaaacagtaaacggcagaagacttataggac 41522731  T
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||||||||||||||||  || || |||||||||||||||||||||||| || || ||||||||||||    
T  41522732 caaattgacacacttaatagttaaatgattaaactgagaaaataaaataagttaagggatcgagggatgtattaa 41522806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 280
Target Start/End: Complemental strand, 39220860 - 39220693
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagat 212  Q
    ||||||||||||||||| ||| || | |||  ||| ||||||||||| ||||||||||||| |||||| || || || |||  ||||||| |  |||||     
T  39220860 ttaataaggtctatggtagactacttttaatattgtttcaccttagacatttaaggttaaaaactaacagagataacgaaaatagtaaacggcagaagac 39220761  T
Q  213 ttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagaga 280  Q
    ||| |||| |||||||| |||||||||||||||| ||| | | ||||||| |||||||||||||||||    
T  39220760 ttaaggaatcaaattgaaacacttaatagttaatagaccaaaatgagaaattaaaataagttaagaga 39220693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 117 - 245
Target Start/End: Original strand, 24069385 - 24069513
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||||  |||||| ||  ||||||| |||||||   |||||| |  ||||| ||||    
T  24069385 taaggtctatggtggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacggaaaggaccaaaatggtaaacggcagaagagttat 24069484  T
Q  217 ggaaccaaattgacacacttaatagttaa 245  Q
    || |||||||||| |||||| ||||||||    
T  24069485 gggaccaaattgagacactttatagttaa 24069513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 7486260 - 7486126
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||| || | ||||  |||||||| ||||| |||| | |||||| ||||||||| | |||||||  |||||||||   |||    
T  7486260 atttaataaggtctatggtggacaacatttaaacatggttcactttagacatttgatgttaaaaactaacggagaggaccaaaatagtaaacagcaaaag 7486161  T
Q  211 atttatggaaccaaattgacacacttaatagttaa 245  Q
    |||||||| ||||||||||  ||||| ||||||||    
T  7486160 atttatgggaccaaattgaagcactttatagttaa 7486126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 40250227 - 40250154
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaa 185  Q
    ||||||||||| ||||||||||||| ||||| |||| |||| |||||||||||| ||||||| |||||||||||    
T  40250227 tttaataaggtatatggtggaccacatataatgttgattcatcttagatatttagggttaaaaactaacggaaa 40250154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 37324621 - 37324693
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacgga 183  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||| |||||| || ||| | |||||||    
T  37324621 atttaataagatttatggtggaccacctataaagttggttcaccttagacatttaaagtgaaaaattaacgga 37324693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 10052287 - 10052205
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||| ||||||||||||||| ||||  ||||||| |||||| |||||| |||||| ||||| ||| |||||||||    
T  10052287 atttaataaggtttatggtggaccacctttaaatatggttcatcttagacatttaatgttaaaaactaaaggagatgaccaaa 10052205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 8395177 - 8395064
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||||||| || |||||||||||||||| ||||||||||||  |||   ||||||||||||| ||||||||| | |||||||   |||||| || |||||    
T  8395177 tttaataaagtgtatggtggaccacctacaaagttggttcattttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaacggaagaaga 8395078  T
Q  212 tttatggaaccaaa 225  Q
     |||||| ||||||    
T  8395077 attatgggaccaaa 8395064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 16363754 - 16363878
Alignment:
Q  119 aggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatgg 218  Q
    ||||||| |||||||||  | |||||||||||||||||||| |||||| |||||  ||||||||| | |||||||  |||||||||  || |||||||||    
T  16363754 aggtctacggtggaccag-tgtaaagttggttcaccttagacatttaaagttaataactaacggagaggaccaaaatagtaaacagcagacgatttatgg 16363852  T
Q  219 aaccaaattgacacacttaatagtta 244  Q
     | |||||||| | |||| |||||||    
T  16363853 gatcaaattgagatactttatagtta 16363878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 9189468 - 9189392
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||| ||||||||||| |||||||| ||||| |||||| |||||||||||    
T  9189468 accaaattgaaacgtttaatagttaagggaccacactgagaaattaaaataaattaagggaccggaggatgtattaa 9189392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 9190484 - 9190559
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| ||||||||||| |||||| ||||||||| |||||||||||||| || | |||||||||||||    
T  9190484 accaaattgaaacatttaatagttaagggactaaactgagaaattaaaataagttaag-gaaccggggatgtattaa 9190559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 39546611 - 39546735
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||| ||||||| |||||||||||||| ||||  ||||||| |||| | |||| | |||||| ||||||||| ||||||||| | |||||| |   || |    
T  39546611 tttactaaggtccatggtggaccacctttaaacatggttcatcttaaacatttgatgttaaaaactaacggagatgaccaaaacggtaaacggcataata 39546710  T
Q  212 tttatggaaccaaattgacacactt 236  Q
    ||||||| |||||||||| ||||||    
T  39546711 tttatgggaccaaattgagacactt 39546735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 117231 - 117113
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||| |||||||||||||||||||||| ||||  ||  |||||||||| |||| | |||||| ||||||||| | ||||||| || |||||    ||||    
T  117231 atttagtaaggtctatggtggaccacctttaaacatgactcaccttagacatttgatgttaaaaactaacggagaggaccaaaacaataaacgacagaag 117132  T
Q  211 atttatggaaccaaattga 229  Q
    |||||||| | ||||||||    
T  117131 atttatgggatcaaattga 117113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 34616215 - 34616146
Alignment:
Q  208 aagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    ||||||||||| |||||||||| |||||| ||||||||  ||  | ||||||||||||||||||||||||    
T  34616215 aagatttatgggaccaaattgagacactttatagttaagagatcaaactgagaaaataaaataagttaag 34616146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 36756247 - 36756114
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||  ||||||| ||||||| ||||  || ||||||||||| |||| | |||||| ||||||||| |||||||||  |||||||     |||    
T  36756247 atttaataaggcttatggtgaaccacctttaaatatgattcaccttagaaatttgatgttaaaaactaacggagatgaccaaaatagtaaacgacataag 36756148  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||  |||| ||||| |||||| |||||||    
T  36756147 atttatgtgaccagattgaaacactttatagtta 36756114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 4534108 - 4534032
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| |||||| |||| |||| | ||||||||| |||||||||||||| ||| | ||||||||||||    
T  4534108 accaaattgaaacatttaatatttaaaggaccaaactgagaaattaaaataagttaagggactgagggatgtattaa 4534032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 7770837 - 7770913
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| |||||  |||||| ||  ||| |||||||||||    
T  7770837 taaggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaaaatgaccaaa 7770913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 7796747 - 7796823
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| |||||  |||||| ||  ||| |||||||||||    
T  7796747 taaggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaaaatgaccaaa 7796823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 7816028 - 7816104
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| |||||  |||||| ||  ||| |||||||||||    
T  7816028 taaggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaaaatgaccaaa 7816104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 8096587 - 8096663
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| | || ||||||||||||  ||||| ||||| |||||||||||||||||| |||  |||||||||||||    
T  8096587 accaaattaagacgcttaatagttaagagactaaactgaaaaaataaaataagttaagggactaggggatgtattaa 8096663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 39515376 - 39515300
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||||||||| |||||||||||||| |||||| ||||||||| |||||  |||||| |   |||||||||||||||    
T  39515376 taaggtctatgatggaccacctataatgttggtccaccttagacatttagtgttaaaaatagacggaaatgaccaaa 39515300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 44103231 - 44103311
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||  ||||||||||||||| ||||  |||||||||||||| |||| | |||||| ||||||||| | |||||||    
T  44103231 ttaataaggcatatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaa 44103311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 12818813 - 12818747
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    ||||||||||| |||| | ||||||||| |||||||||||||| |||||| |||| |||||| ||||    
T  12818813 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccggtggatatattaagccaa 12818747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 12820155 - 12820216
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| ||||   ||||||||| ||||||||||| || ||||||||||||||||||    
T  12820155 ttaatagttaagggaccgaactgagaaattaaaataagtttagggaccgggggatgtattaa 12820216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 280
Target Start/End: Complemental strand, 31871545 - 31871406
Alignment:
Q  144 gttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacact---taata 240  Q
    |||||| |||||||||  |||||||||||| |||||| |||| |||||||  | |||||    ||||||| |||| |||||||| | | |||   |||||    
T  31871545 gttggtccaccttagacgtttaaggttaaaaactaacagaaaggaccaaaataataaacgacagaagattcatgggaccaaattaaaatacttagtaata 31871446  T
Q  241 gttaatggactacactgagaaaataaaataagttaagaga 280  Q
     |||| |||||| | ||||||| |||||||||||||||||    
T  31871445 tttaagggactaaattgagaaattaaaataagttaagaga 31871406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 37472585 - 37472453
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||| |||||||| |||||||||| |||||   ||| ||||||||||||| |  || ||||| |||||||   ||||||     |||    
T  37472585 atttaataaggtctatg-tggaccacatataaagttgtttcacaacagacatttaaggttaaaaataaatggaaaggaccaaaatggtaaacgacaaaag 37472487  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||| |||||||||| |||||| |||||||    
T  37472486 acttatgggaccaaattgagacactttatagtta 37472453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 16346173 - 16346097
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||| | ||||||||| |||||||||||||| ||| | | ||||||||||    
T  16346173 accaaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggactgagagatgtattaa 16346097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 21670245 - 21670165
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||  ||||||||||||| | | ||  ||||||||||||||||||| | |||||| ||||||||| | |||||||    
T  21670245 ttaataaggcatatggtggaccactttttaatatggttcaccttagatatttgatgttaaaaactaacggagaagaccaaa 21670165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 41521391 - 41521315
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| |||||||| |||||||| |||  | ||||| |||||||||||||||||| || | || ||||||||||    
T  41521391 accaaattaacacactttatagttaagggatcaaactgaaaaaataaaataagttaagggatcaggagatgtattaa 41521315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 21267315 - 21267232
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaat 194  Q
    ||||||| |||| |||||||||||||||  ||   |||| |||||||||||||| | |||||| ||||||||| | ||||||||    
T  21267315 atttaattaggtatatggtggaccaccttgaatcatggtccaccttagatatttgatgttaaaaactaacggagaggaccaaat 21267232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 21962006 - 21961924
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||| |||||  ||||||||||||||| ||||  |||||||||| ||| |||| | |||||| ||||||||| | |||||||    
T  21962006 atttagtaaggcatatggtggaccacctttaaacatggttcacctaagacatttgatgttaaaaactaacggagaggaccaaa 21961924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 22914234 - 22914308
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| ||  |||||||||||||||  | ||||| ||| |||||||||||||| |||||||  |||||||||    
T  22914234 caaattgaaacgtttaatagttaatggatcaaactgaaaaattaaaataagttaagggaccgggaaatgtattaa 22914308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 45384415 - 45384341
Alignment:
Q  119 aggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||||||||| ||||||||  || |||| | ||||||||||||||| |||||||   ||||||| |||||||||    
T  45384415 aggtctatggtagaccacctgcaatgttgttacaccttagatatttatggttaaaatgtaacggatatgaccaaa 45384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 23768542 - 23768603
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||| || |||| | ||||| ||| |||||||||||||| |||||| |||||||||||    
T  23768542 ttaatagtgaagggaccaaactgaaaaactaaaataagttaagggaccggaggatgtattaa 23768603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 43579754 - 43579693
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagac 281  Q
    |||||||||| ||| ||||||||||| |||||  | |||||| | |||||||||||||||||    
T  43579754 accaaattgaaacatttaatagttaagggactgaagtgagaagaaaaaataagttaagagac 43579693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 45195849 - 45195921
Alignment:
Q  223 aaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||| |||||| ||| |||| |||| | ||||||||| |||||||||||||| || | |||||||||||||    
T  45195849 aaattgagacactttatatttaagggaccaaactgagaaattaaaataagttaaggga-ctggggatgtattaa 45195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 131932 - 132117
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| || |||||| | |||| || ||||||||||||||||||| ||||||||||||| ||||||||| |||| || || ||||||| |||||||    
T  131932 atttaataaagtttatggtagtccacttacaaagttggttcaccttagacatttaaggttaaaaactaacggagatgatcacattagtaaacggaggaag 132031  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||||| ||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||| ||||   |||||||||||    
T  132032 acttatgggaccaaatcgacacacttaatagttaagggaccaaactgagaaaataaaataagttaagggacctaaggatgtattaa 132117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 46458646 - 46458785
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || |||||| | |||||||   |||||| || ||||    
T  46458646 atttaataaggtctatggtggactacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagaggaccaaaatggtaaacggaagaag 46458745  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggac 250  Q
    |||||||| |||||||||| |||||| |||||||| ||||    
T  46458746 atttatgggaccaaattgagacactttatagttaagggac 46458785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 4167634 - 4167449
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| ||||||||||||||||| ||||  |||||||||||||| |||| | |||||| | | || |||||||| ||| ||||||||    ||||    
T  4167634 atttaataagatctatggtggaccacctttaaacatggttcaccttagaaatttgatgttaaaaattgacagaaatgactaaaacagtaaacgacagaag 4167535  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||| | | |||||||||||||||||||||||| ||| || |||||||||||||||||||||||| || ||| |||||||||||    
T  4167534 acttataggatcaaattgacacacttaatagttaagggattaaactgagaaaataaaataagttaagggatcggaggatgtattaa 4167449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 111 - 276
Target Start/End: Complemental strand, 10256306 - 10256141
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||   ||||||||||||  | |||||    ||||    
T  10256306 atttaataaggtctatggtggactacctataaagttggttcaccttagacttttaaggttaaaaattactagaaatgaccaaaatactaaacgatagaag 10256207  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaa 276  Q
    | |||||  ||||  |||| ||||||||||||||| |||| | |||||||||||||||||||||||    
T  10256206 agttatgagaccattttgagacacttaatagttaagggaccaaactgagaaaataaaataagttaa 10256141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 33459477 - 33459609
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||||||| ||| ||||| ||||||||| ||||||||||||||||||| | ||||||||||| |||||| |||| ||||| || ||||||| ||||||||    
T  33459477 tttaataaagtccatggtagaccacctacaaagttggttcaccttagacagttaaggttaaaaactaacagaaaagaccacattagtaaacggaggaaga 33459576  T
Q  212 tttatggaaccaaattgacacacttaatagtta 244  Q
     |||||| |||||||||| |||||| |||||||    
T  33459577 cttatgggaccaaattgagacactttatagtta 33459609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 115 - 296
Target Start/End: Original strand, 27899151 - 27899332
Alignment:
Q  115 aataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagattt 214  Q
    |||||| ||||||||||  |  ||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||  |||||||     |||||||    
T  27899151 aataagatctatggtgggtcgtctataaagttggttcaccttagatatttaaggttaaaaactaacggataagaccaaaatagtaaacgacaaaagattt 27899250  T
Q  215 atggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||| | |||||||| | | || |||||||| |||| | ||| |||||||||||||||||||| ||| | || |||||||||    
T  27899251 atgggatcaaattgagatattttatagttaaaggaccaaactaagaaaataaaataagttaagggactgaggaatgtattaa 27899332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 25154869 - 25155003
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||| |||||||||    |||||||| ||||    
T  25154869 atttaataagttttatggtggaccacttataaagttggttcaccttagacatttaaggttaaaaacaaacggagatgaccaaaatgataaacagaagaag 25154968  T
Q  211 atttatggaaccaaattgacacacttaatagttaa 245  Q
    |||||||  |  ||||||| |||||| ||||||||    
T  25154969 atttatgagattaaattgagacactttatagttaa 25155003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 296
Target Start/End: Original strand, 35484249 - 35484428
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttat 216  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||| |   |||||||  ||  ||  |  ||||| ||||    
T  35484249 taagatctatggtggaccacctataatgttggttcaccttagacatttagggttaaaaactaacgaagtggaccaaaataggtaatggcagaagagttat 35484348  T
Q  217 ggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    || || ||||||| | |||| |||||||| |||| | |||||| ||||||||||||||||| |||| || ||||||||||    
T  35484349 gggactaaattgaaatactttatagttaaaggaccaaactgaggaaataaaataagttaagggacctggagatgtattaa 35484428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 26406297 - 26406226
Alignment:
Q  122 tctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| | ||||||| |||||||||    
T  26406297 tctatggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacggagatgaccaaa 26406226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 303
Target Start/End: Original strand, 13286930 - 13287119
Alignment:
Q  114 taataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatt 213  Q
    |||||| ||||||||||||  || | ||| |||| |||| |||||| ||||||||||||| ||||||| | | |||||||  |||||||||   ||||      
T  13286930 taataatgtctatggtggaatacttttaatgttgtttcatcttagacatttaaggttaaaaactaacgaagaggaccaaaatagtaaacagcataagaca 13287029  T
Q  214 tatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    || || |||||||||| ||||||||||||||| |||  | |  |||||| ||||||||  |||| || ||||||||||||||| ||||||    
T  13287030 taagggaccaaattgaaacacttaatagttaagggatcaaatagagaaattaaaataaactaagggatcgggggatgtattaagccaaaa 13287119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 38406200 - 38406068
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||| ||||| |||| ||||  |||||||||||||| |||| | |||||| | ||||||||| ||||||| ||||||||    ||||    
T  38406200 atttaataaggtctatg-tggactacctttaaatatggttcaccttagacatttgatgttaaaaattaacggaaaggaccaaaacagtaaacgtcagaag 38406102  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||||||||  |||| |||||| |||||||    
T  38406101 atttatggaaccagtttgagacactttatagtta 38406068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 40881165 - 40881089
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  40881165 accaaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaa 40881089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 10257416 - 10257504
Alignment:
Q  208 aagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||| |||||| |||||||||| ||||||||||||||| |||  | | |||||||||||||||||||||| ||| | ||||||||||||    
T  10257416 aagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaagggacagtgggatgtattaa 10257504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 47927453 - 47927377
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||| || ||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||| | |||||||||    
T  47927453 accaaatcgaaacatttaatagttaagggactaaactgagaaattaaaataagttaagagaccggagcatgtattaa 47927377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 14109005 - 14109076
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacgga 183  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||| |||| | |||||| |||||||||    
T  14109005 tttaataaggtctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacgga 14109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 14418962 - 14419033
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacgga 183  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||| |||| | |||||| |||||||||    
T  14418962 tttaataaggtctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacgga 14419033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 35315251 - 35315340
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||||| |||||||||||| |||||||| |||| |||  | |||||||||||||||||||||||| |||||  | |||||||||    
T  35315251 gaagacttatgggaccaaattgacatacttaataattaagggatcaaactgagaaaataaaataagttaagggaccgacgaatgtattaa 35315340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 4168891 - 4168967
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||||||||| |||||||| |||  | |||||||||||||||||||||||| || | || ||||||||||    
T  4168891 accaaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaagggatcaggagatgtattaa 4168967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 47537082 - 47537158
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| ||||||||||| |||| | ||||||||  |||||||||||||| ||||||||||| ||||||    
T  47537082 accaaattgaaacatttaatagttaagggaccaaactgagaagttaaaataagttaagggaccgggggatatattaa 47537158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 44113609 - 44113542
Alignment:
Q  114 taataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacg 181  Q
    |||||||||  |||||||||||||||| | | |||||||||||||||||||| ||||||| |||||||    
T  44113609 taataaggtgcatggtggaccacctatgatgctggttcaccttagatatttatggttaaaaactaacg 44113542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 37782031 - 37781949
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaa 302  Q
    |||||||||| ||| ||||||||||| | || | ||||||||| |||||||| ||||| ||||| |||||||||||| |||||    
T  37782031 accaaattgaaacatttaatagttaaagaaccaaactgagaaattaaaataatttaagggaccgagggatgtattaagccaaa 37781949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 35483648 - 35483571
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaa-taaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| |||||| |||||||| |||| | ||||| |||| ||||||||||||||| ||||| |||||||||||    
T  35483648 accaaattgaaacactttatagttaagggaccaaactgaaaaaaataaaataagttaagaaaccggaggatgtattaa 35483571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 24872171 - 24872099
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaa 185  Q
    ||||| |||| ||||||||| || ||||||||||| |||||| |||| ||||||||||||| || ||||||||    
T  24872171 ttaatgaggtttatggtggatcatctataaagttgattcaccatagacatttaaggttaaaaacaaacggaaa 24872099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 47928472 - 47928548
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||| |||||||||||  ||||| ||| ||||| |||||||||||||| ||| | ||||||||||||    
T  47928472 accaaattgaaacatttaatagttaagagactaaactaagaaattaaaataagttaagggacggagggatgtattaa 47928548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 18668939 - 18668865
Alignment:
Q  118 aaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaa 192  Q
    ||||||||||||||||||| |||||  |||||  || ||||||||||| ||||||| | ||||||||| ||||||    
T  18668939 aaggtctatggtggaccacatataatattggtctactttagatatttatggttaaaaattaacggaaaggaccaa 18668865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 33071682 - 33071743
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccg 283  Q
    |||||||| ||| ||||||||||| | |||| ||||||||| |||||||||||||| |||||    
T  33071682 caaattgaaacatttaatagttaaggaactaaactgagaaattaaaataagttaagggaccg 33071743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 8661866 - 8661795
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacgg 182  Q
    ||||| |||||| |||||||||||||||| ||  ||| ||||||||||| ||||| ||||||| ||| ||||    
T  8661866 atttattaaggtatatggtggaccacctacaattttgattcaccttagacatttagggttaaaaactgacgg 8661795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 12631877 - 12631958
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    |||||||||| |||||| |||||||| ||||   ||||| |||||||||||||||||| |||| || |||||||||| ||||||    
T  12631877 accaaattgagacactttatagttaa-ggacccaactga-aaaataaaataagttaagggacctggagatgtattaagccaaaa 12631958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Complemental strand, 29344204 - 29344157
Alignment:
Q  254 actgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    ||||||||| |||||||||||||| ||||||| |||||||||| ||||    
T  29344204 actgagaaattaaaataagttaagggaccgggagatgtattaagccaa 29344157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 9662169 - 9662230
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaat 174  Q
    ||||||||||||||||||||| | |||||| |||||| |||| |||| |||| | |||||||    
T  9662169 ttaataaggtctatggtggactatctataatgttggtccaccatagacatttgaagttaaat 9662230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 22060586 - 22060513
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||||||| |||||||||  ||||||| |   |||| || |||||||||||||| |||||| |||||||    
T  22060586 aaatactaacggagatgaccaaaatagtaaacggcataagacttgtggaaccaaattgagacactttatagtta 22060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 22746313 - 22746418
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaata 270  Q
    ||||||||||||| | || ||||  ||||||| |   ||||||||||| |||||||||| |||||| |||||||  |||||| | ||| || | ||||||    
T  22746313 aaatactaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaata 22746412  T
Q  271 agttaa 276  Q
    ||||||    
T  22746413 agttaa 22746418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 25153765 - 25153708
Alignment:
Q  187 gaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||| | |||||| || |||||||||||| |||||||||| |||||| |||||||    
T  25153765 gaccaaaacggtaaacggaagaagatttatgggaccaaattgagacactttatagtta 25153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 45721763 - 45721832
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||||| | || || || ||||||| |||||| | ||||||||||||||||| |||||| |||||||    
T  45721763 actaacggagaggatcacattagtaaacggaggaaaacttatggaaccaaattgagacactttatagtta 45721832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 4857347 - 4857251
Alignment:
Q  148 gttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||||||| |||| | |||||| ||||||||| | ||| ||| |||||||| |  |||||||| ||| ||||||| || ||| || |||||||    
T  4857347 gttcaccttagacatttgatgttaaaaactaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagacattttatagtta 4857251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 24494986 - 24495066
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||||  ||||||||||||| | ||||  |||||||| ||||| |||| | |||||| ||||||||| | |||||||    
T  24494986 ttaataaggcatatggtggaccacttttaaatatggttcactttagacatttgatgttaaaaactaacggagaggaccaaa 24495066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 34598908 - 34598849
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaa 172  Q
    ||||||||||| |||||||||||||||| ||  ||||| ||||||||| |||||| |||||    
T  34598908 tttaataaggtttatggtggaccaccta-aatcttggtccaccttagacatttaaagttaa 34598849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 7e-41; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 14328707 - 14328891
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| | |||||||  |||||||     |||    
T  14328707 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacgacaaaag 14328806  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||||  |||||||| | ||||||||||||||| |||  | |||||||||||||||||||||||| || | |||||||||||||    
T  14328807 aattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggga-ctggggatgtattaa 14328891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 14421717 - 14421901
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| | |||||||  |||||||     |||    
T  14421717 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacgacaaaag 14421816  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    | |||||  |||||||| | ||||||||||||||| |||  | |||||||||||||||||||||||| || | |||||||||||||    
T  14421817 aattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggga-ctggggatgtattaa 14421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 13800137 - 13800029
Alignment:
Q  188 accaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccggggg 287  Q
    |||||| ||||| || ||| ||||||||||| |||||||||||||| ||||||||||| |||| | |||||||||||||||||||||||| ||||  |||    
T  13800137 accaaaacagtatacggagaaagatttatgggaccaaattgacacaattaatagttaagggaccaaactgagaaaataaaataagttaagggacctaggg 13800038  T
Q  288 atgtattaa 296  Q
    |||||||||    
T  13800037 atgtattaa 13800029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 293572 - 293635
Alignment:
Q  110 tatttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  293572 tatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaa 293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 31738546 - 31738413
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||  |||||||||||||  ||||||||||||||||| ||||| ||||||||||||| ||||||||| | |||||||   |||||| |  ||||    
T  31738546 atttaataaaatctatggtggaccgtctataaagttggttcacattagacatttaaggttaaaaactaacggagaggaccaaaatggtaaaccgcagaag 31738447  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    | |||||| |||||||||| |||||| |||||||    
T  31738446 acttatgggaccaaattgaaacactttatagtta 31738413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 2130955 - 2130884
Alignment:
Q  122 tctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| | |||||||    
T  2130955 tctatggtgaaccacctataaaggtggttcaccttagatatttaaggttaaatactaagggagaggaccaaa 2130884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 27440108 - 27440226
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| || |||||| ||||||||| ||||||  ||||||||||| |||||| |||||| | ||||||| | |||||||  ||||||| || ||||    
T  27440108 atttaataaagtttatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacggagaggaccaaaatagtaaacggaagaag 27440207  T
Q  211 atttatggaaccaaattga 229  Q
    |||||||| ||||||||||    
T  27440208 atttatgggaccaaattga 27440226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 126 - 282
Target Start/End: Complemental strand, 9927773 - 9927618
Alignment:
Q  126 tggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaa 225  Q
    |||| ||||||||| |||||||||||| |||||| ||||||||||||| | ||||||| |||||||||  |||||||    |||| ||||||| ||||||    
T  9927773 tggtagaccacctacaaagttggttcatcttagacatttaaggttaaaaattaacggagatgaccaaaatagtaaacgattgaag-tttatgggaccaaa 9927675  T
Q  226 ttgacacacttaatagttaatggactacactgagaaaataaaataagttaagagacc 282  Q
    |||| |||||| |||||||  |||| | ||| | || | ||||||||||||| ||||    
T  9927674 ttgagacactttatagttaggggaccaaactaaaaacaaaaaataagttaagggacc 9927618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 16268724 - 16268604
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| ||||||||| |||||| || ||||||||||||| ||||| ||||||||||||  ||||||  | | ||||| || |||||||| ||||||    
T  16268724 atttaataaagtctatggtagaccacatacaaagttggttcacgttagacatttaaggttaataactaactaagaggaccacattagtaaacataggaag 16268625  T
Q  211 atttatggaaccaaattgaca 231  Q
    | |||||| | ||||||||||    
T  16268624 acttatgggaacaaattgaca 16268604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 1757536 - 1757617
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaaccaa 301  Q
    |||||||||| ||  ||||||||||| |||| | ||||||||| |||||||||||||| |||||| ||||||||||| ||||    
T  1757536 accaaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccggaggatgtattaagccaa 1757617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 14326240 - 14326151
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||||| |||||||||| || || |||| |||| |||  | |||||||||||||||||||||||| || |||||||||||||||    
T  14326240 gaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaagggatcgggggatgtattaa 14326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 14419250 - 14419161
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||| |||||| |||||||||| || || |||| |||| |||  | |||||||||||||||||||||||| || |||||||||||||||    
T  14419250 gaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaagggatcgggggatgtattaa 14419161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 22298786 - 22298705
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    |||||||| || |||||| |||||||| ||||||| || ||||||||| ||||||||||||| ||||||||||  |||||||    
T  22298786 tttaataaagtttatggtagaccacctgtaaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaa 22298705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 16269819 - 16269883
Alignment:
Q  229 acacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtat 293  Q
    |||||||||||||||||  ||  | ||||||||||||||||||||||||||||||| ||||||||    
T  16269819 acacacttaatagttaagagatcaaactgagaaaataaaataagttaagagaccggaggatgtat 16269883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 18139420 - 18139553
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| |||||||||||| || || ||||  |||||||||||||| |||| | |||||| ||||| ||| | ||||||| || ||||| |  ||||    
T  18139420 atttaataatgtctatggtggatcatctttaaacatggttcaccttagacatttgatgttaaaaactaatggagaggaccaaaacaataaacggcagaag 18139519  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    || || || ||||| |||| |||||| |||||||    
T  18139520 atataagggaccaatttgagacactttatagtta 18139553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 16269626 - 16269682
Alignment:
Q  187 gaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtt 243  Q
    ||||| || |||||||||||||||| |||||  ||||||||||||||||||||||||    
T  16269626 gaccacattagtaaacagaggaagacttatgagaccaaattgacacacttaatagtt 16269682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 5693665 - 5693712
Alignment:
Q  256 tgagaaaataaaataagttaagagaccgggggatgtattaaaccaaaa 303  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||    
T  5693665 tgagaaaataaaataagttaagggatcgggggatgtattaagccaaaa 5693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 8412309 - 8412420
Alignment:
Q  171 aaatactaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaata 270  Q
    ||||||||||||| | |||||||  ||||||| |   ||||||||||| |||||||||| |||||| |||||||  |||||| | ||| || | ||||||    
T  8412309 aaatactaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaata 8412408  T
Q  271 agttaagagacc 282  Q
    ||||||| ||||    
T  8412409 agttaagggacc 8412420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 33801950 - 33802083
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||| |||||||||||||||  ||   ||||  ||||||||||||| | |||||| ||||||||| | ||||||  | ||||||    ||||    
T  33801950 atttaataaggtatatggtggaccaccttgaatcatggtctaccttagatatttgatgttaaaaactaacggagaggaccaatacggtaaactacagaag 33802049  T
Q  211 atttatggaaccaaattgacacacttaatagtta 244  Q
    |||||||| | |||||| | |||||| |||||||    
T  33802050 atttatgggatcaaattaagacactttatagtta 33802083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 15728914 - 15728854
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||||| |||||||||||||| | |||||| |||||| |||| ||||||||| ||||||||    
T  15728914 ttaatagggtctatggtggactatctataatgttggtccaccatagatatttgaggttaaa 15728854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 27107255 - 27107179
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| | | |||||||||||| ||  | ||||||||| |||||||||||||| || ||||| |||||||||    
T  27107255 accaaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaagggatcggggaatgtattaa 27107179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 27149061 - 27148985
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| | | |||||||||||| ||  | ||||||||| |||||||||||||| || ||||| |||||||||    
T  27149061 accaaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaagggatcggggaatgtattaa 27148985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 22299902 - 22299969
Alignment:
Q  177 taacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagtta 244  Q
    ||||||| |||||||||  ||||||| |  |||||||||||| |||||||||| |||||| |||||||    
T  22299902 taacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 22299969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 12773247 - 12773173
Alignment:
Q  117 taaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgacca 191  Q
    |||||||||||||||||   ||| || |||| | ||||||||| ||||||||||||| ||| ||||||| |||||    
T  12773247 taaggtctatggtggacagtctacaatgttgatccaccttagacatttaaggttaaaaactgacggaaaggacca 12773173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 1692145 - 1692072
Alignment:
Q  223 aaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||| ||| |||||||||||  ||| | ||||| ||| |||||||| ||||| ||| ||||||||||||||    
T  1692145 aaattgaaacatttaatagttaagagaccaaactgaaaaattaaaataaattaagggactgggggatgtattaa 1692072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 27108231 - 27108292
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| |||| | ||||||||| |||||||||||||| ||||| | ||| ||||||    
T  27108231 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgagagatctattaa 27108292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 27150028 - 27150089
Alignment:
Q  235 ttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||||||| |||| | ||||||||| |||||||||||||| ||||| | ||| ||||||    
T  27150028 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgagagatctattaa 27150089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 11724338 - 11724414
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  |||||||||||  ||| |||| || ||| |||||||||||||| || || ||||||||||||    
T  11724338 accaaattgaaacgtttaatagttaagtgaccacaccgaaaaattaaaataagttaagggatcgagggatgtattaa 11724414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 30231662 - 30231602
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaa 173  Q
    |||| ||||||||||||||||||| ||  | |||||||||||||||| |||| | ||||||    
T  30231662 ttaacaaggtctatggtggaccacttaccatgttggttcaccttagacatttgatgttaaa 30231602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 31738642 - 31738578
Alignment:
Q  12 attaggtgtttgtggtttattataagatacactag-tccctccatgatccaatggttttcatttt 75  Q
    ||||||||||||||||| |||||||| |||| ||| || ||||||||||||| ||| | ||||||    
T  31738642 attaggtgtttgtggttcattataagctacaatagatctctccatgatccaacggtctccatttt 31738578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 31740302 - 31740370
Alignment:
Q  208 aagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaa 276  Q
    ||||||||||| |||||||||| |||||| |||||||| |||| | | ||| || | ||||||||||||    
T  31740302 aagatttatgggaccaaattgagacactttatagttaagggaccaaattgaaaacaaaaaataagttaa 31740370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 112 - 296
Target Start/End: Complemental strand, 16127 - 15948
Alignment:
Q  112 tttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaaga 211  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||| | ||| |||  ||||||| |   |||     
T  16127 tttaataaggtctatggtggaccatctataaagttggttcatcttagacatttaaggttaaaaactaacggagaggactaaaatagtaaacggcataagg 16028  T
Q  212 tttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||      ||||| | |||| |||| ||| |||| | | ||| |||||||||||||||||| |||||| |||||||||||    
T  16027 tttatgg-----gattgaaatactttatagctaagggaccaaagtgaaaaaataaaataagttaagggaccggaggatgtattaa 15948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 17205 - 17278
Alignment:
Q  223 aaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    ||||||| ||||||||||||||| |||| | ||||| |||||||||||||||||  |||||||| |||||||||    
T  17205 aaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaaaggaccggggtatgtattaa 17278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 47253 - 47135
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||||||| || |||||| ||||||||| ||||||  ||||||||||| |||||| |||||| | ||||||| | |||||||  ||||||| || ||||    
T  47253 atttaataaagtttatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacggagaggaccaaaatagtaaacggaagaag 47154  T
Q  211 atttatggaaccaaattga 229  Q
    |||||||| ||||||||||    
T  47153 atttatgggaccaaattga 47135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 85118 - 85194
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  ||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  85118 accaaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaa 85194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 561 - 732
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||| ||| | |||||| ||||||||| |||||||||   |||||| |  ||||    
T  561 atttaataagatctacggtgaaccatctttaaatatggttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaag 660  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagacc 282  Q
    |||||||| || ||||||| |||||| |||||||  |||| | | ||| || | ||||||||||||| ||||    
T  661 atttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggacc 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 282
Target Start/End: Complemental strand, 713 - 542
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||| ||| | |||||| ||||||||| |||||||||   |||||| |  ||||    
T  713 atttaataagatctacggtgaaccatctttaaatatggttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaag 614  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagacc 282  Q
    |||||||| || ||||||| |||||| |||||||  |||| | | ||| || | ||||||||||||| ||||    
T  613 atttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggacc 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 9411 - 9582
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||| ||| | |||||| ||||||||| |||||||||   |||||| |  ||||    
T  9411 atttaataagatctacggtgaaccatctttaaatatggttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaag 9510  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagacc 282  Q
    |||||||| || ||||||| |||||| |||||||  |||| | | ||| || | ||||||||||||| ||||    
T  9511 atttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggacc 9582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 42375 - 42451
Alignment:
Q  207 gaagatttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccg 283  Q
    |||||||||||| | |||||||| |||| |||||||||| |||  | |||||||||||||||||||||||| |||||    
T  42375 gaagatttatgggatcaaattgatacacgtaatagttaagggatcaaactgagaaaataaaataagttaagggaccg 42451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 41091 - 40911
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    ||||| |||||  ||||||||||||||| ||||  |||||||||||||| |||| | |||||| |||||| || |  || ||| ||||||||    ||||    
T  41091 atttagtaaggcatatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagagaactaaaacagtaaacgacagaag 40992  T
Q  211 atttatggaaccaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaaacc 299  Q
    | |||||  ||||||        |||||||||||| |||  | ||||| ||||||||| | |||||| |||| ||||||||||||||||    
T  40991 acttatgagaccaaa--------cttaatagttaagggatcaaactgaaaaaataaaaaaggttaagggaccaggggatgtattaaacc 40911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 205594 - 205670
Alignment:
Q  220 accaaattgacacacttaatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| ||  |||||| |||| |||| | ||||||||| |||||||||||||| ||||||| ||||||||||    
T  205594 accaaattgaaacgtttaataattaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaa 205670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 204593 - 204534
Alignment:
Q  236 taatagttaatggactacactgagaaaataaaataagttaagagaccgggggatgtattaa 296  Q
    |||||||||| |||| | ||||||||| |||||||||||||| |||||| | |||||||||    
T  204593 taatagttaagggacca-actgagaaattaaaataagttaagggaccggtgtatgtattaa 204534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 4262 - 4317
Alignment:
Q  222 caaattgacacacttaatagttaatggactacactgagaaaataaaataagttaag 277  Q
    |||||||| |||||||||| |||| |||||| ||| ||||||||||||||||||||    
T  4262 caaattgagacacttaataattaagggactaaactaagaaaataaaataagttaag 4317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 4159 - 4117
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcac 153  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  4159 atttaatacggtttatggtggaccacctataaagttggttcac 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 54710 - 54635
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacacttaatagttaatggac 250  Q
    ||||||||| | ||||| ||  |||||||||||||||||||||| |||||||||| |||||| ||| |||| ||||    
T  54710 actaacggagaggaccacattggtaaacagaggaagatttatgggaccaaattgagacactttataattaaaggac 54635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 56633 - 56758
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaatcagtaaacagaggaag 210  Q
    |||||||||||||| |||||||||| || ||||  | |||  |||||||||||| | |||||| |||||  || | || | || |||||||| |  ||||    
T  56633 atttaataaggtctttggtggaccatctttaaacatagtttcccttagatatttgatgttaaaaactaatagagaggatctaaacagtaaacggcagaag 56732  T
Q  211 atttatggaaccaaattgacacactt 236  Q
    |||||| | |||||||||| ||||||    
T  56733 atttataggaccaaattgagacactt 56758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 1391 - 1322
Alignment:
Q  113 ttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacgga 183  Q
    ||||||| ||||||||| || | | |||||||||||||||||||| | ||||||||||||| | |||||||    
T  1391 ttaataaagtctatggtagatc-cttataaagttggttcaccttaaacatttaaggttaaaaaataacgga 1322  T

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Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 2262 - 2323
Alignment:
Q  175 actaacggaaatgaccaaatcagtaaacagaggaagatttatggaaccaaattgacacactt 236  Q
    ||||||||||| |||||||  |||||||||  ||||| |||||| |||||||||| ||||||    
T  2262 actaacggaaaggaccaaaatagtaaacagtagaagagttatgggaccaaattgaaacactt 2323  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 207731 - 207813
Alignment:
Q  111 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaatgaccaaa 193  Q
    ||||| |||||  ||||||||||||||| ||||  |||||||||| ||| |||| | |||||| ||||||||| | |||||||    
T  207731 atttagtaaggcatatggtggaccacctttaaacatggttcacctaagacatttgatgttaaaaactaacggagaggaccaaa 207813  T

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