View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13470_high_1 (Length: 327)

Name: NF13470_high_1
Description: NF13470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13470_high_1
NF13470_high_1
[»] chr2 (33 HSPs)
chr2 (188-308)||(36128733-36128853)
chr2 (1-145)||(18212-18355)
chr2 (1-144)||(20279257-20279397)
chr2 (1-144)||(36735333-36735475)
chr2 (1-144)||(5874174-5874317)
chr2 (1-144)||(11873682-11873826)
chr2 (1-144)||(5871033-5871176)
chr2 (1-144)||(18500226-18500370)
chr2 (1-144)||(38084385-38084533)
chr2 (26-144)||(12370403-12370519)
chr2 (145-199)||(36128656-36128710)
chr2 (69-115)||(29586103-29586149)
chr2 (87-144)||(21064686-21064743)
chr2 (76-144)||(22518960-22519028)
chr2 (105-144)||(12374554-12374593)
chr2 (105-144)||(12388381-12388420)
chr2 (69-144)||(15814317-15814392)
chr2 (5-50)||(19657406-19657451)
chr2 (100-144)||(25036877-25036921)
chr2 (100-144)||(25040984-25041028)
chr2 (78-142)||(44370269-44370333)
chr2 (5-141)||(27343887-27344020)
chr2 (105-144)||(39649666-39649705)
chr2 (105-144)||(44299959-44299998)
chr2 (5-144)||(45489259-45489395)
chr2 (15-60)||(21755768-21755813)
chr2 (1-37)||(14583041-14583077)
chr2 (1-37)||(15944470-15944506)
chr2 (1-37)||(15952985-15953021)
chr2 (1-37)||(35138709-35138745)
chr2 (1-37)||(35147045-35147081)
chr2 (1-37)||(38168270-38168306)
chr2 (1-37)||(41233757-41233793)
[»] chr6 (51 HSPs)
chr6 (1-144)||(12667460-12667603)
chr6 (1-144)||(28702810-28702953)
chr6 (1-144)||(19713680-19713824)
chr6 (1-136)||(14176931-14177067)
chr6 (1-144)||(18960921-18961062)
chr6 (1-144)||(22779065-22779205)
chr6 (1-144)||(17783992-17784136)
chr6 (76-144)||(20452655-20452723)
chr6 (1-144)||(20459379-20459524)
chr6 (1-144)||(19719836-19719980)
chr6 (1-144)||(19898950-19899093)
chr6 (88-147)||(26896464-26896523)
chr6 (76-140)||(10985072-10985136)
chr6 (1-104)||(22764816-22764916)
chr6 (87-144)||(21961607-21961664)
chr6 (1-60)||(26896539-26896598)
chr6 (87-144)||(22631694-22631751)
chr6 (15-60)||(27616520-27616565)
chr6 (1-60)||(25506454-25506514)
chr6 (78-145)||(15666264-15666331)
chr6 (105-144)||(19169106-19169145)
chr6 (105-144)||(24143592-24143631)
chr6 (105-144)||(24150082-24150121)
chr6 (86-144)||(615926-615984)
chr6 (86-144)||(623827-623885)
chr6 (5-144)||(20058767-20058903)
chr6 (7-144)||(20050906-20051040)
chr6 (78-142)||(22059713-22059777)
chr6 (101-144)||(1549203-1549246)
chr6 (105-144)||(8275504-8275543)
chr6 (101-144)||(12391057-12391100)
chr6 (105-144)||(16816883-16816922)
chr6 (105-144)||(16825638-16825677)
chr6 (105-144)||(18965559-18965598)
chr6 (25-60)||(22926088-22926123)
chr6 (5-60)||(25690856-25690911)
chr6 (5-60)||(25697649-25697704)
chr6 (5-60)||(25711836-25711891)
chr6 (106-145)||(27509372-27509411)
chr6 (86-144)||(9131712-9131770)
chr6 (86-144)||(9145536-9145594)
chr6 (26-60)||(14473794-14473828)
chr6 (8-50)||(22599652-22599694)
chr6 (106-144)||(27517310-27517348)
chr6 (5-50)||(1624988-1625033)
chr6 (15-56)||(28269604-28269645)
chr6 (15-56)||(28348354-28348395)
chr6 (5-60)||(1549274-1549330)
chr6 (1-37)||(5004177-5004213)
chr6 (16-60)||(14779892-14779936)
chr6 (105-145)||(30437383-30437423)
[»] chr1 (31 HSPs)
chr1 (1-144)||(20429353-20429495)
chr1 (15-149)||(35070030-35070163)
chr1 (1-144)||(19367475-19367619)
chr1 (1-149)||(22116273-22116421)
chr1 (1-144)||(1961638-1961778)
chr1 (1-144)||(44832479-44832621)
chr1 (1-144)||(18098375-18098517)
chr1 (1-144)||(47108373-47108514)
chr1 (8-133)||(1955829-1955951)
chr1 (15-144)||(13450035-13450161)
chr1 (94-144)||(2336072-2336122)
chr1 (71-145)||(13185782-13185856)
chr1 (87-144)||(39454381-39454438)
chr1 (6-60)||(20521290-20521344)
chr1 (106-144)||(22840176-22840214)
chr1 (105-146)||(5638367-5638408)
chr1 (105-144)||(5624228-5624267)
chr1 (101-144)||(16884518-16884561)
chr1 (105-144)||(20979997-20980036)
chr1 (105-144)||(22570920-22570959)
chr1 (105-144)||(25926805-25926844)
chr1 (94-144)||(20518281-20518331)
chr1 (15-60)||(19763277-19763322)
chr1 (119-152)||(22486296-22486329)
chr1 (217-245)||(3804966-3804994)
chr1 (5-60)||(6205632-6205688)
chr1 (117-145)||(6205827-6205855)
chr1 (1-37)||(31540070-31540106)
chr1 (1-37)||(31548639-31548675)
chr1 (1-37)||(35103977-35104013)
chr1 (5-60)||(44910867-44910923)
[»] chr5 (37 HSPs)
chr5 (1-144)||(15956904-15957047)
chr5 (1-144)||(36448249-36448391)
chr5 (1-147)||(20099573-20099718)
chr5 (1-145)||(40014875-40015017)
chr5 (1-144)||(20092676-20092818)
chr5 (1-144)||(36454627-36454769)
chr5 (1-144)||(37048344-37048484)
chr5 (1-144)||(23378225-23378366)
chr5 (1-144)||(25532868-25533011)
chr5 (2-144)||(25526188-25526330)
chr5 (1-142)||(26186571-26186712)
chr5 (1-144)||(20639785-20639928)
chr5 (1-140)||(25042205-25042342)
chr5 (105-148)||(21688149-21688192)
chr5 (105-144)||(21696072-21696111)
chr5 (105-144)||(26553292-26553331)
chr5 (86-144)||(11939621-11939679)
chr5 (105-146)||(15794005-15794046)
chr5 (107-144)||(29901229-29901266)
chr5 (105-145)||(12395971-12396011)
chr5 (100-144)||(25677884-25677928)
chr5 (105-144)||(12387278-12387317)
chr5 (105-144)||(15779770-15779809)
chr5 (105-144)||(17947984-17948023)
chr5 (105-144)||(17961874-17961913)
chr5 (105-144)||(31511206-31511245)
chr5 (105-144)||(31525330-31525369)
chr5 (106-144)||(7786438-7786476)
chr5 (106-144)||(7794288-7794326)
chr5 (86-144)||(11953545-11953603)
chr5 (86-144)||(18955114-18955172)
chr5 (106-144)||(23577467-23577505)
chr5 (15-60)||(22704567-22704612)
chr5 (100-144)||(24062657-24062701)
chr5 (1-37)||(24956759-24956795)
chr5 (1-37)||(24965222-24965258)
chr5 (105-145)||(25450636-25450676)
[»] chr3 (60 HSPs)
chr3 (1-145)||(13111710-13111853)
chr3 (1-144)||(261364-261507)
chr3 (1-144)||(13105562-13105704)
chr3 (1-144)||(4313518-4313660)
chr3 (1-144)||(14893071-14893211)
chr3 (1-145)||(11180759-11180903)
chr3 (1-144)||(14881240-14881380)
chr3 (1-146)||(68143-68287)
chr3 (15-145)||(21638498-21638627)
chr3 (15-144)||(14887980-14888106)
chr3 (1-144)||(74238-74380)
chr3 (1-143)||(12550412-12550552)
chr3 (1-146)||(23288045-23288189)
chr3 (1-144)||(8612622-8612764)
chr3 (1-144)||(30102376-30102517)
chr3 (1-145)||(48060649-48060796)
chr3 (76-144)||(16031256-16031324)
chr3 (1-144)||(8606162-8606304)
chr3 (1-144)||(3404752-3404894)
chr3 (87-145)||(13086553-13086611)
chr3 (85-147)||(49967351-49967413)
chr3 (5-144)||(13509341-13509479)
chr3 (25-149)||(30068626-30068748)
chr3 (101-146)||(18706265-18706310)
chr3 (78-146)||(15610488-15610556)
chr3 (86-142)||(37470141-37470197)
chr3 (5-60)||(15619777-15619832)
chr3 (5-60)||(15627125-15627180)
chr3 (86-145)||(20603997-20604056)
chr3 (86-144)||(37256102-37256160)
chr3 (86-144)||(37265938-37265996)
chr3 (5-49)||(2211343-2211387)
chr3 (105-149)||(8804198-8804242)
chr3 (1-60)||(9525347-9525407)
chr3 (1-60)||(9555021-9555081)
chr3 (106-146)||(15909140-15909180)
chr3 (5-60)||(18955599-18955655)
chr3 (101-145)||(43097560-43097604)
chr3 (105-149)||(46371167-46371211)
chr3 (105-144)||(5651850-5651889)
chr3 (105-144)||(8812603-8812642)
chr3 (105-144)||(11630009-11630048)
chr3 (5-60)||(14740071-14740126)
chr3 (105-144)||(15529068-15529107)
chr3 (105-144)||(15537758-15537797)
chr3 (25-60)||(19445433-19445468)
chr3 (25-60)||(19447258-19447293)
chr3 (105-144)||(21607452-21607491)
chr3 (109-144)||(33814598-33814633)
chr3 (105-144)||(46385299-46385338)
chr3 (78-144)||(15579438-15579504)
chr3 (106-144)||(15923319-15923357)
chr3 (15-60)||(12701113-12701158)
chr3 (117-145)||(2212206-2212234)
chr3 (117-145)||(15619695-15619723)
chr3 (119-147)||(16417508-16417536)
chr3 (100-144)||(20433759-20433803)
chr3 (100-144)||(20447685-20447729)
chr3 (1-37)||(41006672-41006708)
chr3 (1-37)||(41015452-41015488)
[»] chr4 (26 HSPs)
chr4 (1-146)||(19737932-19738076)
chr4 (1-144)||(50187783-50187926)
chr4 (1-144)||(20548381-20548522)
chr4 (1-144)||(3382366-3382510)
chr4 (1-145)||(3389114-3389259)
chr4 (76-144)||(20555005-20555073)
chr4 (15-144)||(25984369-25984496)
chr4 (86-146)||(22175845-22175905)
chr4 (27-144)||(39534175-39534290)
chr4 (88-144)||(39745430-39745486)
chr4 (71-144)||(4619220-4619293)
chr4 (78-147)||(14924994-14925063)
chr4 (1-144)||(47522505-47522648)
chr4 (5-60)||(10814307-10814362)
chr4 (87-145)||(15580490-15580548)
chr4 (105-144)||(3836829-3836868)
chr4 (101-144)||(55793251-55793294)
chr4 (87-141)||(3439629-3439683)
chr4 (106-144)||(15880072-15880110)
chr4 (1-60)||(39745353-39745413)
chr4 (105-144)||(12427136-12427175)
chr4 (5-52)||(36697260-36697307)
chr4 (105-144)||(41148979-41149018)
chr4 (105-147)||(22703451-22703493)
chr4 (100-144)||(10220457-10220501)
chr4 (5-60)||(16360254-16360310)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-144)||(7980-8120)
[»] chr7 (33 HSPs)
chr7 (1-144)||(22346867-22347008)
chr7 (1-144)||(34139056-34139199)
chr7 (1-144)||(34132744-34132887)
chr7 (1-145)||(6851934-6852079)
chr7 (3-144)||(1858491-1858632)
chr7 (1-145)||(18778987-18779131)
chr7 (1-142)||(43906101-43906240)
chr7 (1-144)||(28415150-28415293)
chr7 (1-144)||(13270808-13270952)
chr7 (201-260)||(1271941-1272000)
chr7 (5-60)||(16265782-16265837)
chr7 (5-60)||(16273450-16273505)
chr7 (105-144)||(42631285-42631324)
chr7 (106-144)||(15683152-15683190)
chr7 (86-144)||(23878702-23878760)
chr7 (105-146)||(6113640-6113681)
chr7 (1-60)||(10440029-10440089)
chr7 (105-144)||(4847170-4847209)
chr7 (105-144)||(9460445-9460484)
chr7 (105-144)||(9474235-9474274)
chr7 (101-144)||(15767129-15767172)
chr7 (86-144)||(8810065-8810123)
chr7 (86-144)||(8817879-8817937)
chr7 (106-144)||(36898425-36898463)
chr7 (25-59)||(46299798-46299832)
chr7 (24-60)||(8913405-8913441)
chr7 (1-37)||(12978571-12978607)
chr7 (201-245)||(15574888-15574932)
chr7 (5-60)||(15767045-15767101)
chr7 (105-145)||(16402672-16402712)
chr7 (1-45)||(20542837-20542881)
chr7 (5-49)||(23443755-23443799)
chr7 (105-145)||(30379104-30379144)
[»] chr8 (27 HSPs)
chr8 (3-144)||(22162912-22163052)
chr8 (3-144)||(22156911-22157043)
chr8 (15-145)||(14891801-14891928)
chr8 (1-144)||(31999763-31999905)
chr8 (1-144)||(32025576-32025719)
chr8 (25-144)||(20733160-20733276)
chr8 (1-144)||(25859197-25859340)
chr8 (1-144)||(15061259-15061401)
chr8 (1-144)||(32006734-32006875)
chr8 (25-144)||(20725198-20725314)
chr8 (25-144)||(20738096-20738212)
chr8 (1-144)||(25852952-25853095)
chr8 (5-60)||(25766164-25766219)
chr8 (5-60)||(25795658-25795713)
chr8 (94-144)||(24487931-24487981)
chr8 (87-144)||(6030848-6030905)
chr8 (86-144)||(12307679-12307737)
chr8 (100-146)||(25642947-25642993)
chr8 (25-60)||(3219470-3219505)
chr8 (105-144)||(15707138-15707177)
chr8 (105-144)||(18433030-18433069)
chr8 (105-144)||(23267953-23267992)
chr8 (100-146)||(23816699-23816745)
chr8 (5-57)||(12844032-12844085)
chr8 (13-50)||(25371914-25371951)
chr8 (81-145)||(12843947-12844011)
chr8 (1-37)||(30938398-30938434)
[»] scaffold1922 (1 HSPs)
scaffold1922 (1-144)||(139-281)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-144)||(23583-23724)
scaffold0027 (86-144)||(397-455)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-144)||(98-242)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-146)||(6244-6388)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-144)||(7718-7864)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-144)||(14099-14240)
scaffold0016 (5-50)||(58598-58643)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-144)||(38519-38664)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-142)||(89796-89937)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-144)||(86618-86762)
[»] scaffold0050 (2 HSPs)
scaffold0050 (1-146)||(27636-27783)
scaffold0050 (7-144)||(41192-41330)
[»] scaffold0253 (2 HSPs)
scaffold0253 (1-145)||(10338-10482)
scaffold0253 (1-145)||(19763-19907)
[»] scaffold0001 (3 HSPs)
scaffold0001 (69-145)||(96781-96857)
scaffold0001 (108-140)||(4775-4807)
scaffold0001 (15-59)||(4840-4884)
[»] scaffold0290 (1 HSPs)
scaffold0290 (69-144)||(22046-22121)
[»] scaffold0028 (1 HSPs)
scaffold0028 (24-145)||(65837-65957)
[»] scaffold0473 (1 HSPs)
scaffold0473 (71-145)||(9155-9229)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-144)||(15644-15786)
[»] scaffold0351 (1 HSPs)
scaffold0351 (71-144)||(7633-7706)
[»] scaffold0630 (1 HSPs)
scaffold0630 (71-135)||(1370-1434)
[»] scaffold0582 (1 HSPs)
scaffold0582 (5-60)||(298-353)
[»] scaffold0441 (1 HSPs)
scaffold0441 (87-144)||(2471-2528)
[»] scaffold0068 (2 HSPs)
scaffold0068 (105-148)||(25718-25761)
scaffold0068 (105-144)||(17799-17838)
[»] scaffold0505 (1 HSPs)
scaffold0505 (87-145)||(11469-11527)
[»] scaffold0094 (2 HSPs)
scaffold0094 (78-144)||(30699-30765)
scaffold0094 (78-144)||(41664-41730)
[»] scaffold0029 (3 HSPs)
scaffold0029 (94-144)||(38088-38138)
scaffold0029 (105-144)||(20212-20251)
scaffold0029 (105-144)||(33953-33992)
[»] scaffold0458 (1 HSPs)
scaffold0458 (87-144)||(9280-9337)
[»] scaffold0378 (3 HSPs)
scaffold0378 (71-144)||(770-843)
scaffold0378 (106-144)||(3336-3374)
scaffold0378 (106-144)||(15816-15854)
[»] scaffold0101 (1 HSPs)
scaffold0101 (71-144)||(16530-16603)
[»] scaffold0032 (1 HSPs)
scaffold0032 (69-144)||(29103-29178)
[»] scaffold0435 (1 HSPs)
scaffold0435 (5-144)||(8302-8438)
[»] scaffold1888 (1 HSPs)
scaffold1888 (87-144)||(1058-1115)
[»] scaffold0023 (1 HSPs)
scaffold0023 (89-145)||(150634-150690)
[»] scaffold1890 (1 HSPs)
scaffold1890 (5-60)||(876-931)
[»] scaffold1719 (1 HSPs)
scaffold1719 (105-144)||(17-56)
[»] scaffold0605 (1 HSPs)
scaffold0605 (101-144)||(9360-9403)
[»] scaffold0431 (1 HSPs)
scaffold0431 (105-144)||(2800-2839)
[»] scaffold0206 (1 HSPs)
scaffold0206 (5-60)||(9021-9076)
[»] scaffold0186 (1 HSPs)
scaffold0186 (25-60)||(15680-15715)
[»] scaffold0182 (1 HSPs)
scaffold0182 (105-144)||(1715-1754)
[»] scaffold0064 (1 HSPs)
scaffold0064 (105-144)||(9209-9248)
[»] scaffold0031 (1 HSPs)
scaffold0031 (5-48)||(18233-18276)
[»] scaffold0503 (2 HSPs)
scaffold0503 (106-144)||(1944-1982)
scaffold0503 (106-144)||(6511-6549)
[»] scaffold0014 (1 HSPs)
scaffold0014 (78-144)||(3766-3832)
[»] scaffold0183 (1 HSPs)
scaffold0183 (112-145)||(20678-20711)
[»] scaffold0104 (1 HSPs)
scaffold0104 (107-144)||(38567-38604)
[»] scaffold0002 (1 HSPs)
scaffold0002 (117-146)||(362893-362922)
[»] scaffold0540 (1 HSPs)
scaffold0540 (8-60)||(2839-2891)
[»] scaffold0362 (1 HSPs)
scaffold0362 (100-144)||(4815-4859)
[»] scaffold0173 (1 HSPs)
scaffold0173 (5-60)||(846-902)
[»] scaffold0011 (2 HSPs)
scaffold0011 (105-149)||(202701-202745)
scaffold0011 (105-149)||(208778-208822)


Alignment Details
Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 36128733 - 36128853
Alignment:
Q  188 gtacctctccttagaatgaaactactctgaaagggaccaatcaaatcatcaaagaaagagcggatacagttaacgagaatctcgaagatgacttcaaaaa 287  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  36128733 gtacctctccttagaatgaagctactctgaaagggaccaatcaaatcatcaaagaaagagcggatacggttaacgagaatctcggagatgacttcaaaaa 36128832  T
Q  288 atacattacaaacgttgacgg 308  Q
    |||||||||||||||||||||    
T  36128833 atacattacaaacgttgacgg 36128853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 18212 - 18355
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  18212 agaaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 18310  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  18311 gacatgtctcagtggggccttaggtcaaaaattggggtatgacac 18355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 20279257 - 20279397
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | ||||||||||||||| | |||||||||||||||||| |||||||||        |||||| |||||||||||||||||||||||||    
T  20279257 agaaaagagggcccgactcggaatcaaaattgaggtattttaaaatacctctctgccgaaatttc---actgaaaaatcagagatcgatcagagtcaagt 20279353  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  20279354 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20279397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36735475 - 36735333
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||| |||||||||| |||    
T  36735475 agaaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatggatcagagtcgagt 36735377  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  36735376 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 36735333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5874174 - 5874317
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  |||| |||        |||||| ||||||||||||||||||||| ||    
T  5874174 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgctgaattttttt-actgaaaaatcagagatcgatcagagtcgag 5874272  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  5874273 tgacatgtgtcagtggacccttaggtcaaaaattggggtatgaca 5874317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 11873826 - 11873682
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataa-tcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||  ||| ||||        |||||| || ||||||||||||||||||||||    
T  11873826 agaaaagagggtccgactcggaatgaaaaatgaggtattttaaaatacctccctgtcgaattttttttactgaaaaaatcagagatcgatcagagtcaag 11873727  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||   ||||||||||||||||||||||||||    
T  11873726 tgacatgtgtcagtggggtcttaggtcaaaaattggggtatgaca 11873682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5871033 - 5871176
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  |||| |||        |||||| ||||||||||||||||||||| ||    
T  5871033 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgctgaattttttt-actgaaaaatcagagatcgatcagagtcgag 5871131  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||| ||||||||||||  |||||||||||||||||||||||||||    
T  5871132 tgatatgtgtcagtgggcccttaggtcaaaaattggggtatgaca 5871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18500370 - 18500226
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaa--ttaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaa 98  Q
    ||||| ||||||| |||||| |||||||||  | ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||    
T  18500370 agaaaggagggtccgactcgaaatcaaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagagtcaa 18500272  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||    
T  18500271 gtgacatgtgtcagtggggccttagatcaaaaattggggtatgaca 18500226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 38084385 - 38084533
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaata----cctttctgccgaannnnnnnnactgaataatcagagatcgatcagagt 95  Q
    ||||||||||||| |||||| ||||||||| | |||||||||||||||    |||  ||||||||        |||||| ||||||||||||||||||||    
T  38084385 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatatatacctccctgccgaattttttttactgaaaaatcagagatcgatcagagt 38084484  T
Q  96 caagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    | ||||||||||||||||||  |||||||||||||||||||||||||||    
T  38084485 cgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 38084533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 12370403 - 12370519
Alignment:
Q  26 aaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggt 125  Q
    |||||| |||||||||||||||||||| |||||||        |||||| |||||| ||| |||||||||||| ||||| |||||||||| | ||| |||    
T  12370403 aaaaatgaggtattttaaaatacctttttgccgaatttttt--actgaaaaatcagggattgatcagagtcaaatgacacgtgtcagtgggatcttgggt 12370500  T
Q  126 caaaaattggggtatgaca 144  Q
    |||||||||||||||||||    
T  12370501 caaaaattggggtatgaca 12370519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 36128656 - 36128710
Alignment:
Q  145 catatgatggaccactttccaagtcaagatagcattatcaagggtacctctcctt 199  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  36128656 catatgatggacgactttccaagtcaagatagcattatcaagtgtacctctcctt 36128710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 29586149 - 29586103
Alignment:
Q  69 actgaataatcagagatcgatcagagtcaagtgacatgtgtcagtgg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  29586149 actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgg 29586103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 21064743 - 21064686
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||| ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  21064743 gatcagggtcaaatgacatgcgtcagtgggaccttaggtaaaaaattggggtatgaca 21064686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 22518960 - 22519028
Alignment:
Q  76 aatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| |||| |||||| || ||  |||| |||||||||| ||||||||||||||||||||||||||||    
T  22518960 aatcatagattgatcagggttaaacgacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 22519028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 12374593 - 12374554
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12374593 tgtgtcagtggaaccttaggtcaaaatttggggtatgaca 12374554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 12388420 - 12388381
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12388420 tgtgtcagtggaaccttaggtcaaaatttggggtatgaca 12388381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 15814317 - 15814392
Alignment:
Q  69 actgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| |||||||||||||||||||||||  |||  |||| ||||  | ||||| ||||||||||||||||||||    
T  15814317 actgaaaaatcagagatcgatcagagtcaaacgacgcgtgttagtgatatcttagttcaaaaattggggtatgaca 15814392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 19657406 - 19657451
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacct 50  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||    
T  19657406 aagagggtccgactcggaatcaaatatgaggtattttaaaatacct 19657451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 25036877 - 25036921
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||    
T  25036877 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 25036921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 25040984 - 25041028
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||    
T  25040984 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 25041028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 44370333 - 44370269
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatga 142  Q
    |||||||| |||||| || ||| ||||  ||||||||  ||||||||||||||||||||||||||    
T  44370333 tcagagattgatcagggttaagcgacacatgtcagtgcgaccttaggtcaaaaattggggtatga 44370269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 27343887 - 27344020
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgaca 104  Q
    |||||||||  |||||||| ||||||| ||||||||||||||||| | ||||||||        |||||| |||| ||||| |||||| || ||  ||||    
T  27343887 aagagggtccaactcggaaccaaaaataaggtattttaaaatacc-tcctgccgaa--tttttcactgaaaaatccgagattgatcagggttaaacgaca 27343983  T
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatg 141  Q
     |||||||| | ||||||||| ||||||| |||||||    
T  27343984 cgtgtcagtaggaccttaggtaaaaaatttgggtatg 27344020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 39649705 - 39649666
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  39649705 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 39649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 44299998 - 44299959
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  44299998 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 44299959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 45489259 - 45489395
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgaca 104  Q
    ||||||| | ||||||||||||||| | |||||||| ||||||||| |||||||||        |||||| | |  |||| ||| ||| || || ||||     
T  45489259 aagagggcccgactcggaatcaaaa-tgaggtatttcaaaatacctctctgccgaaattttc--actgaaaagttggagaccgaacagggttaaatgacg 45489355  T
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| |||  ||||||||||||||||||||||||||||    
T  45489356 tgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 45489395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 21755768 - 21755813
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||| || ||||||||||||||||||  ||||||||    
T  21755768 gactcggaatcaaacatgaggtattttaaaatacctccctgccgaa 21755813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14583077 - 14583041
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  14583077 agaaaagagggtccgactcggaatcaaaaatgaggta 14583041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15944470 - 15944506
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  15944470 agaaaagagggtccgactcggaatcaaaaatgaggta 15944506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15952985 - 15953021
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  15952985 agaaaagagggtccgactcggaatcaaaaatgaggta 15953021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35138745 - 35138709
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  35138745 agaaaagagggtccgactcggaatcaaaaatgaggta 35138709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35147081 - 35147045
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  35147081 agaaaagagggtccgactcggaatcaaaaatgaggta 35147045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38168270 - 38168306
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  38168270 agaaaagagggtccgactcggaatcaaaaatgaggta 38168306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41233757 - 41233793
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  41233757 agaaaagagggtccgactcggaatcaaaaatgaggta 41233793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12667460 - 12667603
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  12667460 agaaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagt 12667559  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  12667560 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 12667603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 28702810 - 28702953
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | || |||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  28702810 agaaaagagggcccgaatcggaatcaaaaatgaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagt 28702909  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  28702910 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 28702953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19713824 - 19713680
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaa--ttaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaa 98  Q
    ||||||||||||| |||||| |||||||||  | ||||||||||||||||||  ||||||||        |||||| ||||||||||||||||||||| |    
T  19713824 agaaaagagggtccgactcgaaatcaaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagagtcga 19713726  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  19713725 gtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19713680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14177067 - 14176931
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||  ||||||||        |||||| ||||||||||||||||||||| ||    
T  14177067 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttttactgaaaaatcagagatcgatcagagtcgag 14176968  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggg 136  Q
    ||||||||||||||||  |||||||||||||||||||    
T  14176967 tgacatgtgtcagtggggccttaggtcaaaaattggg 14176931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18960921 - 18961062
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaa-tacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||| |||||  || |||||        ||| || ||||||||||||||||||||||||    
T  18960921 agaaaagagggtccgactcggaataaaaaatgaggtattttaaaagtacctcccttccgaattttt---actaaaaaatcagagatcgatcagagtcaag 18961017  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  18961018 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 18961062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 22779065 - 22779205
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | |||| | |||||||| | |||||||||||||||||| |||||||||        |||||| |||||||||||||||||||||||||    
T  22779065 agaaaagagggcccgacttgaaatcaaaattgaggtattttaaaatacctctctgccgaattttc---actgaaaaatcagagatcgatcagagtcaagt 22779161  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| ||||||||||  | |||||||||||||||||||||||||    
T  22779162 gacacgtgtcagtggggcattaggtcaaaaattggggtatgaca 22779205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17783992 - 17784136
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaa--ttaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaa 98  Q
    |||||||| |||| ||||||||||||||||  | | ||||||||||||||||  ||||||||        |||||| ||||||||||||||||||||| |    
T  17783992 agaaaagaaggtccgactcggaatcaaaaaaatgaagtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagagtcga 17784090  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  17784091 gtgacatgtgtcagtggagccttaggtcaaaaattggtgtatgaca 17784136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 20452655 - 20452723
Alignment:
Q  76 aatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20452655 aatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattggggtatgaca 20452723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 20459379 - 20459524
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnn--actgaataatcagagatcgatcagagtcaa 98  Q
    ||||||||||| | || ||||||| |||||| ||||||||||||||||||  ||||||||          |||||| ||||||||||| |||||||||||    
T  20459379 agaaaagagggcccgattcggaataaaaaatgaggtattttaaaatacctccctgccgaaattttttttcactgaaaaatcagagatcaatcagagtcaa 20459478  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||    
T  20459479 gtgacatgtgtcactggggccttaggtcaaaaattggggtatgaca 20459524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19719980 - 19719836
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaa--ttaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaa 98  Q
    ||||||||||||| |||||| |||||||||  | ||||||||||||||||||  ||||||||        ||| || ||||||||||| ||||||||| |    
T  19719980 agaaaagagggtccgactcgaaatcaaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actaaaaaatcagagatcaatcagagtcga 19719882  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  19719881 gtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19719836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19899093 - 19898950
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    |||||||||||||  ||||| ||||||||| | ||||||||||||||||||  ||||||||        |||||| ||||||||||| ||||||||| ||    
T  19899093 agaaaagagggtccaactcgaaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcaatcagagtcgag 19898995  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| ||||||  |||||||||||||||| ||||||||||    
T  19898994 tgacatgtgccagtggggccttaggtcaaaaatttgggtatgaca 19898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 26896523 - 26896464
Alignment:
Q  88 atcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacacat 147  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  26896523 atcagagttaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacacat 26896464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 10985072 - 10985136
Alignment:
Q  76 aatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtat 140  Q
    |||||||||| ||||||||||||||||||||||| |||||   ||||||||||||||||||||||    
T  10985072 aatcagagatggatcagagtcaagtgacatgtgttagtggggtcttaggtcaaaaattggggtat 10985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22764816 - 22764916
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | |||||| |||||||| | |||||||||||||||||| |||||||||        | |||| |||||||||||||||||||||||||    
T  22764816 agaaaagagggcccgactcgaaatcaaaattgaggtattttaaaatacctctctgccgaa---ttttcattgaaaaatcagagatcgatcagagtcaagt 22764912  T
Q  101 gaca 104  Q
    ||||    
T  22764913 gaca 22764916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 21961664 - 21961607
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  21961664 gatcagtgtcaaatgacatgcgttagtggaaccttaggtcaaaaattggggtatgaca 21961607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26896598 - 26896539
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||||||| |||||||||    
T  26896598 agaaaagagggtccaactcggaatcaaaaatggggtattttaaaatacctctctgccgaa 26896539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 22631751 - 22631694
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||| ||||||| |||||||  ||||||||||||||||||||||||||||    
T  22631751 gatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgaca 22631694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 27616565 - 27616520
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||| || ||||||||||||||||||||||||||||    
T  27616565 gactcggaatcaaatatgaggtattttaaaatacctttctgccgaa 27616520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25506454 - 25506514
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaat-acctttctgccgaa 60  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| | |||| |||||||||    
T  25506454 agaaaagagggcctgactcggaatcaaaaatgaggtattttaaagtaacctctctgccgaa 25506514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 15666264 - 15666331
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||||| |||||| || ||| |||| |||| |||||  ||||||||||||||||||||||||||||    
T  15666264 tcagagattgatcagggttaagcgacacgtgttagtgggcccttaggtcaaaaattggggtatgacac 15666331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 19169145 - 19169106
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  19169145 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 19169106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 24143592 - 24143631
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24143592 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 24143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 24150082 - 24150121
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24150082 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 24150121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 615926 - 615984
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  615926 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 615984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 623827 - 623885
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  623827 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 623885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 20058767 - 20058903
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgaca 104  Q
    |||||||||||| ||| || ||||| | |||||||||||||||||| |||||||||        | |||| |||||  ||| |||||| || ||  ||||    
T  20058767 aagagggtctgattcgaaaccaaaa-tgaggtattttaaaatacctctctgccgaatctttc--attgaaaaatcaaggattgatcagggttaaacgaca 20058863  T
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
     | |||||||| ||||||||||||||||||||||||||||    
T  20058864 cgggtcagtgggaccttaggtcaaaaattggggtatgaca 20058903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 20050906 - 20051040
Alignment:
Q  7 gagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatg 106  Q
    |||||||||| ||| |||| ||||| |||||||||||||||||| |||||||||        | |||| |||||  ||| |||||| || ||  |||| |    
T  20050906 gagggtctgattcg-aatccaaaatgaggtattttaaaatacctctctgccgaa--tctttcattgaaaaatcaaggattgatcagggttaaacgacacg 20051002  T
Q  107 tgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
     |||||||| | ||||||||||||||||||||||||||    
T  20051003 ggtcagtgggaacttaggtcaaaaattggggtatgaca 20051040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 22059777 - 22059713
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatga 142  Q
    |||||||| |||||| || ||| ||||  ||||||||  ||||||||||||||||||||||||||    
T  22059777 tcagagattgatcagggttaagcgacacatgtcagtgcgaccttaggtcaaaaattggggtatga 22059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 1549246 - 1549203
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  1549246 gacacgtgttagtgggaccttaggtcaaaaattggggtatgaca 1549203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 8275543 - 8275504
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  8275543 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 8275504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 12391100 - 12391057
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||    
T  12391100 gacatgtgttagtggtatcttaggtcaaaaattggggtatgaca 12391057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 16816883 - 16816922
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  16816883 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 16816922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 16825638 - 16825677
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  16825638 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 16825677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 18965559 - 18965598
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  18965559 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 18965598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 22926088 - 22926123
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22926088 caaaaatgaggtattttaaaatacctttctgccgaa 22926123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 25690911 - 25690856
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| |||||||||| |||||| ||||||||||||||| ||  ||||||||    
T  25690911 aagagggtccgactcggaataaaaaatgaggtattttaaaataactccctgccgaa 25690856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 25697704 - 25697649
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| |||||||||| |||||| ||||||||||||||| ||  ||||||||    
T  25697704 aagagggtccgactcggaataaaaaatgaggtattttaaaataactccctgccgaa 25697649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 25711891 - 25711836
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| | ||||||||||||||||| || |||||||||||||||  ||||||||    
T  25711891 aagagggcccgactcggaatcaaaaatgagatattttaaaatacctccctgccgaa 25711836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 27509411 - 27509372
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  27509411 gtgtcagtgggaccttaggtcaaaatttggggtatgacac 27509372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 9131712 - 9131770
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||| ||| | ||| |||||||| |||||||||||||    
T  9131712 cgatcagggtcaagtgacacgtgtcaatgggatcttgggtcaaaatttggggtatgaca 9131770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 9145536 - 9145594
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||| ||| | ||| |||||||| |||||||||||||    
T  9145536 cgatcagggtcaagtgacacgtgtcaatgggatcttgggtcaaaatttggggtatgaca 9145594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 14473828 - 14473794
Alignment:
Q  26 aaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||| ||||||||||||||||||||||||||||    
T  14473828 aaaaatgaggtattttaaaatacctttctgccgaa 14473794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 22599652 - 22599694
Alignment:
Q  8 agggtctgactcggaatcaaaaattaggtattttaaaatacct 50  Q
    |||| |||||||||||||||| || ||||||||||||||||||    
T  22599652 agggcctgactcggaatcaaatatgaggtattttaaaatacct 22599694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 27517348 - 27517310
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  27517348 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 27517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 1625033 - 1624988
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacct 50  Q
    ||||||| | |||||||||||||| || ||||||||||||||||||    
T  1625033 aagagggcccgactcggaatcaaatatgaggtattttaaaatacct 1624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 28269604 - 28269645
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgc 56  Q
    |||||||||||||| || |||||||||||||||||| |||||    
T  28269604 gactcggaatcaaatatgaggtattttaaaatacctatctgc 28269645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 28348354 - 28348395
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgc 56  Q
    |||||||||||||| || |||||||||||||||||| |||||    
T  28348354 gactcggaatcaaatatgaggtattttaaaatacctatctgc 28348395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 1549330 - 1549274
Alignment:
Q  5 aagagggtctgactcggaatc-aaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| | ||||||||||| |||||| ||||||||||||||||||  ||||||||    
T  1549330 aagagggcccgactcggaatccaaaaatgaggtattttaaaatacctccctgccgaa 1549274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5004213 - 5004177
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  5004213 agaaaagagggtccgactcggaatcaaaaatgaggta 5004177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 14779892 - 14779936
Alignment:
Q  16 actcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||| || ||||||| |||||||||||||||||| |||||||||    
T  14779892 actcgaaaccaaaaatgaggtattttaaaatacctctctgccgaa 14779936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 30437383 - 30437423
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||| |||| |||||||||||||| ||||||||||||||    
T  30437383 tgtgtcggtgggaccttaggtcaaaatttggggtatgacac 30437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 20429495 - 20429353
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||         ||||||||||||||||||||||||||||||||    
T  20429495 agaaaagagggtctgactcggaatcaaaaatgaggtattttaaaatacctccctgccga-ttttttttactgaataatcagagatcgatcagagtcaagt 20429397  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  20429396 gacaagtgtcagtgggaccttaggtcaaaaattggggtatgaca 20429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 35070163 - 35070030
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtg 114  Q
    |||||||||| |||||| |||||||||||||||||| | |||||||        |||||| |||||||||||||||||||||||||||||||||||||||    
T  35070163 gactcggaataaaaaatgaggtattttaaaatacctctttgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtg 35070065  T
Q  115 gaaccttaggtcaaaaattggggtatgacacatat 149  Q
    |  ||||||||||||||||||||||||||||||||    
T  35070064 gggccttaggtcaaaaattggggtatgacacatat 35070030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19367619 - 19367475
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnn-actgaataatcagagatcgatcagagtcaag 99  Q
    |||||||| |||| |||||||||| |||||| ||||||||||||||||||  || |||||         |||||| ||||||||||||||||||||||||    
T  19367619 agaaaagaaggtccgactcggaataaaaaatgaggtattttaaaatacctcccttccgaatttttttttactgaaaaatcagagatcgatcagagtcaag 19367520  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  19367519 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19367475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 22116273 - 22116421
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | |||||||| |||||||||  ||||||||        |||||| ||||||||||||||||||||  ||    
T  22116273 agaaaagagggtccgactcggaatcaaaaaatgaggtatttaaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagagttgag 22116371  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacacatat 149  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  22116372 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacacatat 22116421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1961778 - 1961638
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||| | |||| ||        |||||| |||||||||||||||||||||||||    
T  1961778 agaaaagagggtccgactcggaataaaaaatgaggtattttaaaatacctctttgccaaattttc---actgaaaaatcagagatcgatcagagtcaagt 1961682  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |  ||||||||||||  |||||||||||||||||||||||||||    
T  1961681 gttatgtgtcagtggggccttaggtcaaaaattggggtatgaca 1961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 44832479 - 44832621
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||   |||||||        |||||| |||||||||||||||||||||||||    
T  44832479 agaaaagagggtccgactcggaataaaaaatgaggtattttaaaatacctccttgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 44832577  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||| | |||||||| |||||||||| |||||||    
T  44832578 gacatgtgtcagtgaagccttaggttaaaaattgggatatgaca 44832621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18098517 - 18098375
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||   || ||||        |||||| |||||||||||||||||||||||||    
T  18098517 agaaaagagggtccgactcggaataaaaaatgaggtattttaaaatacctccatgtcgaatttttcc-actgaaaaatcagagatcgatcagagtcaagt 18098419  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| |||||  |||||||| ||||||||||||||||||    
T  18098418 gacatgtgttagtggggccttaggttaaaaattggggtatgaca 18098375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 47108514 - 47108373
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | |||||||||| |||||| ||||||||||||||||||| |||| |||        |||||| |||||||||||||||||||||||||    
T  47108514 agaaaagagggcccgactcggaataaaaaatgaggtattttaaaataccttcctgcggaatttttt--actgaaaaatcagagatcgatcagagtcaagt 47108417  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| ||||| ||||||||| ||||||| || |||||||    
T  47108416 gacatgtgtaagtgggaccttaggttaaaaattaggatatgaca 47108373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 1955951 - 1955829
Alignment:
Q  8 agggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgt 107  Q
    |||||| ||||||||||||||||| |||||||||||||||||| | | || ||        |||||| ||||||||||||||||||||||||||| | ||    
T  1955951 agggtccgactcggaatcaaaaatgaggtattttaaaatacctctttaccaaattttc---actgaaaaatcagagatcgatcagagtcaagtgatacgt 1955855  T
Q  108 gtcagtggaaccttaggtcaaaaatt 133  Q
    ||||||||  ||||||||||||||||    
T  1955854 gtcagtggggccttaggtcaaaaatt 1955829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 13450161 - 13450035
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtg 114  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||        ||| || ||||||||||||||| ||||||| ||||  | |||||||    
T  13450161 gactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttc---actaaaaaatcagagatcgatccgagtcaaatgacgcgcgtcagtg 13450065  T
Q  115 gaaccttaggtcaaaaattggggtatgaca 144  Q
    | |||||||||||||| || ||||||||||    
T  13450064 ggaccttaggtcaaaatttagggtatgaca 13450035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 2336072 - 2336122
Alignment:
Q  94 gtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  2336072 gtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 2336122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 13185856 - 13185782
Alignment:
Q  71 tgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||| |||||||||| |||||| || ||  |||||||||| |||||||||||||||||||||||| |||||||||    
T  13185856 tgaaaaatcagagattgatcagggttaaacgacatgtgtcggtggaaccttaggtcaaaaattggagtatgacac 13185782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 39454438 - 39454381
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||| ||||||| |||||||  ||||||||||||||||||||||||||||    
T  39454438 gatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgaca 39454381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 20521290 - 20521344
Alignment:
Q  6 agagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||| |||||||||| | |||||| |||||||||||||||||||| |||||||    
T  20521290 agagggcctgactcggatttaaaaatgaggtattttaaaatacctttatgccgaa 20521344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 22840176 - 22840214
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  22840176 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 22840214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 5638367 - 5638408
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  5638367 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaca 5638408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 5624228 - 5624267
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  5624228 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 5624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 16884561 - 16884518
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| ||||||||||  |||||||||||||||||||||||||||    
T  16884561 gacacgtgtcagtggggccttaggtcaaaaattggggtatgaca 16884518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 20979997 - 20980036
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  20979997 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 20980036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 22570920 - 22570959
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  22570920 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 22570959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 25926805 - 25926844
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  25926805 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 25926844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 20518331 - 20518281
Alignment:
Q  94 gtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| ||||||| || ||||| | ||||||||||||||||||||||||||    
T  20518331 gtcaaatgacatgcgttagtgggatcttaggtcaaaaattggggtatgaca 20518281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 19763277 - 19763322
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| | ||||| |||||||||||||||||| |||||||||    
T  19763277 gactcggaaccgaaaatgaggtattttaaaatacctatctgccgaa 19763322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 22486296 - 22486329
Alignment:
Q  119 cttaggtcaaaaattggggtatgacacatatgat 152  Q
    ||||||||||||||||||||||||||||| ||||    
T  22486296 cttaggtcaaaaattggggtatgacacatgtgat 22486329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Original strand, 3804966 - 3804994
Alignment:
Q  217 aaagggaccaatcaaatcatcaaagaaag 245  Q
    |||||||||||||||||||||||||||||    
T  3804966 aaagggaccaatcaaatcatcaaagaaag 3804994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 6205632 - 6205688
Alignment:
Q  5 aagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaa 60  Q
    ||||||| | ||||||||| |||||| | |||||||||||||||||| |||||||||    
T  6205632 aagagggcccgactcggaaccaaaaaatgaggtattttaaaatacctctctgccgaa 6205688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 6205827 - 6205855
Alignment:
Q  117 accttaggtcaaaaattggggtatgacac 145  Q
    |||||||||||||||||||||||||||||    
T  6205827 accttaggtcaaaaattggggtatgacac 6205855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31540106 - 31540070
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  31540106 agaaaagagggtccgactcggaatcaaaaatgaggta 31540070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31548675 - 31548639
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  31548675 agaaaagagggtccgactcggaatcaaaaatgaggta 31548639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35103977 - 35104013
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  35103977 agaaaagagggtccgactcggaatcaaaaatgaggta 35104013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 44910867 - 44910923
Alignment:
Q  5 aagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaa 60  Q
    ||||| ||| ||||||||| |||||| | |||||||||||||||||| |||||||||    
T  44910867 aagagtgtccgactcggaaccaaaaaatgaggtattttaaaatacctctctgccgaa 44910923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15956904 - 15957047
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||| ||| | |||||||||||||||||  |||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  15956904 agaaaagcgggcccgactcggaatcaaaaatggggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagatcgatcagagtcaagt 15957003  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15957004 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 15957047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36448391 - 36448249
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  36448391 agaaaagagggtccgactcggaatcaaaaataaggtattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 36448293  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  36448292 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 36448249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20099573 - 20099718
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| || |||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  20099573 agaaaagagggtccgactcggaatcaaaaatgagttattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 20099671  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacacat 147  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||    
T  20099672 gacatgtgttagtggggccttaggtcaaaaattggggtatgacacat 20099718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 40015017 - 40014875
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||||||  |||||| |        |||||| |||||||||||||||||||||||||    
T  40015017 agaaaagagggcccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgcatttttc--actgaaaaatcagagatcgatcagagtcaagt 40014920  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  40014919 gacatgtgtcagtgggaccttaagtcaaaaattggggtatgacac 40014875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 20092676 - 20092818
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||| ||| |||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  20092676 agaaaagagggtccgactcgaaataaaaaatgaggtattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 20092774  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  20092775 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20092818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36454769 - 36454627
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  36454769 agaaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 36454671  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| |||   |||||||||||||||||||||||||||    
T  36454670 gacatgtgtccgtgaggccttaggtcaaaaattggggtatgaca 36454627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 37048484 - 37048344
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | |||||||||| |||||| |||||||||||||||||| |||||||||        |||||| |||||||||||||||||||||||||    
T  37048484 agaaaagagggcccgactcggaataaaaaatgaggtattttaaaatacctctctgccgaattttc---actgaaaaatcagagatcgatcagagtcaagt 37048388  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||||||||| | ||||||||||||||| ||||||||||    
T  37048387 gacacgtgtcagtgggatcttaggtcaaaaatttgggtatgaca 37048344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 23378225 - 23378366
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||| | ||||||||||||||||||||||||    
T  23378225 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttt---actggaaaatcagagatcgatcagagtcaag 23378321  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||    
T  23378322 tgacatgtgtcagtggggccttaggtcaaaaattgaggtatgaca 23378366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25533011 - 25532868
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||||| ||||||||||||||||||||| ||    
T  25533011 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagagtcgag 25532913  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||    
T  25532912 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 25532868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 25526330 - 25526188
Alignment:
Q  2 gaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||| || |||    
T  25526330 gaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagattcgagt 25526232  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  25526231 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 25526188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26186571 - 26186712
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||  ||||||||        |||||| ||||||||||||||||||||| ||    
T  26186571 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagagtcgag 26186669  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatga 142  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  26186670 tgacatgtgtcagtggggccttaggtcaaaaattggggtatga 26186712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 20639785 - 20639928
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| ||||||||||||||||   ||||||||||||||||||  || |||||        |||||| ||||||||||||||||||||| ||    
T  20639785 agaaaagagggtccgactcggaatcaaaaaaagaggtattttaaaatacctccctcccgaattttttt-actgaaaaatcagagatcgatcagagtcgag 20639883  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  20639884 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20639928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 25042205 - 25042342
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | || ||||||| |||||| ||||||||||| ||||||| || |||||        |||||| ||||||||||||| |||||||||||    
T  25042205 agaaaagagggaccgattcggaataaaaaatgaggtattttaatataccttcctaccgaatttttc--actgaaaaatcagagatcgaacagagtcaagt 25042302  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtat 140  Q
    |||| || |||||||| |||||||||||||||| ||||||    
T  25042303 gacacgtatcagtggagccttaggtcaaaaatttgggtat 25042342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 21688192 - 21688149
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacacata 148  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  21688192 tgtgtcagtgggaccttaggtcaaaaattggggtatgacacata 21688149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 21696111 - 21696072
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  21696111 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 21696072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 26553292 - 26553331
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  26553292 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 26553331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 11939621 - 11939679
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  11939621 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 11939679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 15794005 - 15794046
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  15794005 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaca 15794046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 29901266 - 29901229
Alignment:
Q  107 tgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  29901266 tgtcagtgggaccttaggtcaaaaattggggtatgaca 29901229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 12395971 - 12396011
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  12395971 tgtgtcagtgggaccttaggtcaaaatttggggtatgacac 12396011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 25677884 - 25677928
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||    
T  25677884 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 25677928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 12387278 - 12387317
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  12387278 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 12387317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 15779770 - 15779809
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  15779770 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 15779809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 17948023 - 17947984
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  17948023 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 17947984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 17961913 - 17961874
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  17961913 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 17961874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 31511245 - 31511206
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  31511245 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 31511206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 31525369 - 31525330
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  31525369 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 31525330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 7786476 - 7786438
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  7786476 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 7786438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 7794326 - 7794288
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  7794326 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 7794288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 11953545 - 11953603
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| | |||||| |||||||||||||    
T  11953545 cgatcagggtcaagtgacacgtgtcagtgggaacttggatcaaaatttggggtatgaca 11953603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 18955172 - 18955114
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| |||| |||||| |||||||||  | ||| ||||||||||||||||||||||    
T  18955172 cgatcagggtcaggtgacacgtgtcagtgagatcttgggtcaaaaattggggtatgaca 18955114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 23577467 - 23577505
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  23577467 gtgtcaatgggaccttaggtcaaaaattggggtatgaca 23577505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 22704612 - 22704567
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  22704612 gactcggaaccaaaaatgaggtattttaaaatacctctctgtcgaa 22704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 24062657 - 24062701
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  24062657 tgacacgtgtcagtgctatcttaggtcaaaaattggggtatgaca 24062701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24956759 - 24956795
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  24956759 agaaaagagggtccgactcggaatcaaaaatgaggta 24956795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24965222 - 24965258
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  24965222 agaaaagagggtccgactcggaatcaaaaatgaggta 24965258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 25450636 - 25450676
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||| ||||| |||||||| ||||||||||||||    
T  25450636 tgtgtcagtgggacctttggtcaaaatttggggtatgacac 25450676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 13111710 - 13111853
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  13111710 agaaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 13111808  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  13111809 gacatgtgtcagtggggccttaggtcaaaaattggggtatgacac 13111853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 261507 - 261364
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||  ||||| ||        |||||| ||||| |||||||||||||||||||    
T  261507 agaaaagagggtctgactcggaattaaaaatgaggtattttaaaatacctccctgccaaatttttttcactgaaaaatcaaagatcgatcagagtcaagt 261408  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  261407 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 261364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13105562 - 13105704
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  13105562 agaaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 13105660  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||| ||||||||||    
T  13105661 gacatgtgtcagtggggccttaggtcaaaaattagggtatgaca 13105704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4313518 - 4313660
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||  ||| ||||        |||||| ||| |||||||||||||||||||||    
T  4313518 agaaaagagggtctgactcgaaatcaaaaatgaggtattttaaaatacctccctgtcgaattttttc-actgaaaaattagagatcgatcagagtcaagt 4313616  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  4313617 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 4313660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 14893071 - 14893211
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||||||   |||||||        |||||| |||||||||||||||||||||||||    
T  14893071 agaaaagaggggccgactcggaatcaaaaatgaggtattttaaaatacctccatgccgaattttt---actgaaaaatcagagatcgatcagagtcaagt 14893167  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  14893168 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 14893211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 11180903 - 11180759
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||| ||||        |||||| ||||||||||||||||||||| ||    
T  11180903 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaataccttcctgtcgaattttttt-actgaaaaatcagagatcgatcagagtcgag 11180805  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||    
T  11180804 tgacatgtgtcagtggggccttaggttaaaaattggggtatgacac 11180759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 14881240 - 14881380
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||||||   |||||||        | |||| |||||||||||||||||||||||||    
T  14881240 agaaaagagggcccgactcggaatcaaaaatgaggtattttaaaatacctccatgccgaatattt---attgaaaaatcagagatcgatcagagtcaagt 14881336  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| ||||  |||||||||||||||||||||||||||    
T  14881337 gacatgtgtcggtggggccttaggtcaaaaattggggtatgaca 14881380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 68287 - 68143
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||||||  |||| |||        |||||||||||| ||||||||||||||||||    
T  68287 agaaaagagggtctgactcggaatcaaaaaatgaagtattttaaaatacctccctgctgaatttttt--actgaataatcaaagatcgatcagagtcaag 68190  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    ||||||||| ||||||  | |||||||||||||||||||||||||||    
T  68189 tgacatgtgccagtggggcgttaggtcaaaaattggggtatgacaca 68143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 21638498 - 21638627
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtg 114  Q
    |||||||||| |||||| | ||||||||||||| || |||||||||        |||||| |||||||||||||||||||||||||||||||||||||||    
T  21638498 gactcggaataaaaaatgaagtattttaaaataactctctgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtg 21638596  T
Q  115 gaaccttaggtcaaaaattggggtatgacac 145  Q
    |  ||||||||||||||||||||||||||||    
T  21638597 gggccttaggtcaaaaattggggtatgacac 21638627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 14887980 - 14888106
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtg 114  Q
    ||||||||  ||||||| || ||||||||||||||| ||||| |||        |||||| |||||||||||||||||||||||||||||||||||||||    
T  14887980 gactcggagccaaaaatgagatattttaaaatacctctctgctgaattttt---actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtg 14888076  T
Q  115 gaaccttaggtcaaaaattggggtatgaca 144  Q
    || |||||||||||||||||||||||||||    
T  14888077 gagccttaggtcaaaaattggggtatgaca 14888106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 74380 - 74238
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||||||  |||| |||        |||||||||||| ||||||||||||||||||    
T  74380 agaaaagagggtctgactcggaatcaaaaaatgaagtattttaaaatacctccctgctgaatttttt--actgaataatcaaagatcgatcagagtcaag 74283  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| ||||||  | |||||||||||||||||||||||||    
T  74282 tgacatgtgccagtggggcgttaggtcaaaaattggggtatgaca 74238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 12550552 - 12550412
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||| |||| |||||| ||||||||||||||||||  ||||||||        |||||| ||||||||||||||| ||||| |||    
T  12550552 agaaaagagggtccgactctgaataaaaaatgaggtattttaaaatacctccctgccgaatttttt--actgaaaaatcagagatcgatcggagtcgagt 12550455  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgac 143  Q
    ||||||||||| |||  ||||||||||||||||||||||||||    
T  12550454 gacatgtgtcactggggccttaggtcaaaaattggggtatgac 12550412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 23288045 - 23288189
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||  ||| |||||| ||||| | ||||||||||||||||||  ||||||||        |||||| ||||||||||||||||||||||||    
T  23288045 agaaaagagggttcgacccggaataaaaaaatgaggtattttaaaatacctccctgccgaatttttc--actgaaaaatcagagatcgatcagagtcaag 23288142  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||    
T  23288143 tgacatgtgtaagtggggccttaggtcaaaaattggggtatgacaca 23288189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8612764 - 8612622
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||| ||        |||||| ||||||||||||||||||||| ||    
T  8612764 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccaaatctttt--actgaaaaatcagagatcgatcagagtcgag 8612667  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||| |||||||   ||||||||||||||||||||||||||    
T  8612666 tgacatgtctcagtgggctcttaggtcaaaaattggggtatgaca 8612622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30102376 - 30102517
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||| ||||| | |||||||||||||||||| |||||||||        |||| | ||||||||||||||||||||||||    
T  30102376 agaaaagagggtccgactcggaataaaaaaatgaggtattttaaaatacctctctgccgaattttt---actggaaaatcagagatcgatcagagtcaag 30102472  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||| |||||||  ||||| ||||||||||||| |||||||    
T  30102473 tgacatgtatcagtggggccttaagtcaaaaattgggatatgaca 30102517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 48060649 - 48060796
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnn---actgaataatcagagatcgatcagagtca 97  Q
    ||||||||||| | |||||||||| |||||| ||||||||||||||| ||  ||||||||           |||||| |||||| |||||||||||||||    
T  48060649 agaaaagagggcccgactcggaataaaaaatgaggtattttaaaatatctccctgccgaaatttttttttcactgaaaaatcagtgatcgatcagagtca 48060748  T
Q  98 agtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||    
T  48060749 agtgacatgtgtcagtgaggccttaggtcaaaaattggggtatgacac 48060796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 16031256 - 16031324
Alignment:
Q  76 aatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  16031256 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 16031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8606304 - 8606162
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||| ||        |||||| |||||||||||||| |||||| ||    
T  8606304 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccaaatttttt--actgaaaaatcagagatcgattagagtcgag 8606207  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||| |||||||   ||||||||||||||||||||||||||    
T  8606206 tgacatgtttcagtgggctcttaggtcaaaaattggggtatgaca 8606162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 3404894 - 3404752
Alignment:
Q  1 agaaaagagggtctgactcggaatc-aaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| ||||||||||| |||||| |||||||| |||||||||  || |||||        |||||| |||||||||||||| |||||| |     
T  3404894 agaaaagagggtccgactcggaatcgaaaaatgaggtatttaaaaatacctacctcccgaatatttt--actgaaaaatcagagatcgattagagtcgaa 3404797  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||    
T  3404796 tgacatgtgtcagtggggccttaggtaaaaaattggggtatgaca 3404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 13086611 - 13086553
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||||    
T  13086611 gatcagggtcaaatgacatgtgttagtgggaccttaggtcaaaaattggggtatgacac 13086553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 49967413 - 49967351
Alignment:
Q  85 tcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacacat 147  Q
    |||||||| ||||||||||| ||||||||||  |||||||||||||||| |||||||||||||    
T  49967413 tcgatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattagggtatgacacat 49967351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 13509341 - 13509479
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactg--aataatcagagatcgatcagagtcaagtga 102  Q
    ||||||| | || |||||||||||||| |||||||||||||||| | |||||||||        ||||  || || |||||||||||||||||||| |||    
T  13509341 aagagggcccgattcggaatcaaaaatgaggtattttaaaatacttctctgccgaactttt---actggaaaaaaacagagatcgatcagagtcaaatga 13509437  T
Q  103 catgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |  | |||||||| |||||||||||||| || ||||||||||    
T  13509438 cgcgcgtcagtgggaccttaggtcaaaatttagggtatgaca 13509479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 30068626 - 30068748
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataa-tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttag 123  Q
    ||||||| |||||||||||||||||| |||||||||        |||||| || ||| ||||||||||||||||||||||  |  ||||||| |||||||    
T  30068626 caaaaatgaggtattttaaaatacctctctgccgaattttc---actgaaaaaatcaaagatcgatcagagtcaagtgacgcgcatcagtgggaccttag 30068722  T
Q  124 gtcaaaaattggggtatgacacatat 149  Q
    ||||||| || |||||||||| ||||    
T  30068723 gtcaaaatttagggtatgacatatat 30068748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 18706310 - 18706265
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||    
T  18706310 gacacgtgtcagtgggaccttaggtcaaaaattggggtatgacaca 18706265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 15610488 - 15610556
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||||||| ||| || || ||| |||| | |||||||| ||||||||||||||||||||||||||||||    
T  15610488 tcagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaattggggtatgacaca 15610556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 37470197 - 37470141
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatga 142  Q
    ||||||| ||||||||||| |||| |||||  |||||||||||||||||||||||||    
T  37470197 cgatcagggtcaagtgacacgtgttagtggggccttaggtcaaaaattggggtatga 37470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 15619832 - 15619777
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| |||||| || ||||||| |||||||||||||||||| |||||||||    
T  15619832 aagagggtcagactcgtaaccaaaaatgaggtattttaaaatacctctctgccgaa 15619777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 15627180 - 15627125
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| |||||| || ||||||| |||||||||||||||||| |||||||||    
T  15627180 aagagggtcagactcgtaaccaaaaatgaggtattttaaaatacctctctgccgaa 15627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 20603997 - 20604056
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| ||||||||||||||    
T  20603997 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgacac 20604056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 37256102 - 37256160
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  37256102 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 37256160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 37265938 - 37265996
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  37265938 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 37265996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 2211387 - 2211343
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacc 49  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||    
T  2211387 aagagggcctgactcggaataaaaaatgaggtattttaaaatacc 2211343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 8804242 - 8804198
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacacatat 149  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||    
T  8804242 tgtgtcagtgggaccttaggtcaaaatttggggtatgacatatat 8804198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9525347 - 9525407
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaat-acctttctgccgaa 60  Q
    ||||||||||| | |||||||||| |||||| |||||||||||| | ||||||||||||||    
T  9525347 agaaaagagggcccgactcggaataaaaaatgaggtattttaaagtaacctttctgccgaa 9525407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9555021 - 9555081
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaat-acctttctgccgaa 60  Q
    ||||||||||| | |||||||||| |||||| |||||||||||| | ||||||||||||||    
T  9555021 agaaaagagggcccgactcggaataaaaaatgaggtattttaaagtaacctttctgccgaa 9555081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 15909180 - 15909140
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  15909180 gtgtcaatggatccttaggtcaaaaattggggtatgacaca 15909140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 18955599 - 18955655
Alignment:
Q  5 aagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||||| |||||||||    
T  18955599 aagagggtctgacttggaataaaaaaatgaggtattttaaaatacctctctgccgaa 18955655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 43097604 - 43097560
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||    
T  43097604 gacacgtgtcagtgggaccttaagtcaaaaattggggtatgacac 43097560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 46371211 - 46371167
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacacatat 149  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||    
T  46371211 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaaatat 46371167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 5651850 - 5651889
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  5651850 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 5651889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 8812642 - 8812603
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  8812642 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 8812603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 11630009 - 11630048
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  11630009 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 11630048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 14740071 - 14740126
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| | |||||||||||||| || ||||||||||||||||||  ||||||||    
T  14740071 aagagggcccgactcggaatcaaatatgaggtattttaaaatacctccctgccgaa 14740126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 15529068 - 15529107
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  15529068 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 15529107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 15537758 - 15537797
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  15537758 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 15537797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 19445468 - 19445433
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19445468 caaaaatgaggtattttaaaatacctttctgccgaa 19445433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 19447293 - 19447258
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19447293 caaaaatgaggtattttaaaatacctttctgccgaa 19447258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 21607491 - 21607452
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  21607491 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 21607452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 33814598 - 33814633
Alignment:
Q  109 tcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33814598 tcagtgggaccttaggtcaaaaattggggtatgaca 33814633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 46385338 - 46385299
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  46385338 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 46385299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 15579438 - 15579504
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||| ||| || || ||| |||| | |||||||| ||||||||||||||| ||||||||||||    
T  15579438 tcagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaactggggtatgaca 15579504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 15923357 - 15923319
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  15923357 gtgtcaatggatccttaggtcaaaaattggggtatgaca 15923319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 12701158 - 12701113
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||| || ||||||||||||||||||  ||||||||    
T  12701158 gactcggaatcaaatatgaggtattttaaaatacctccctgccgaa 12701113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 2212206 - 2212234
Alignment:
Q  117 accttaggtcaaaaattggggtatgacac 145  Q
    |||||||||||||||||||||||||||||    
T  2212206 accttaggtcaaaaattggggtatgacac 2212234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 15619723 - 15619695
Alignment:
Q  117 accttaggtcaaaaattggggtatgacac 145  Q
    |||||||||||||||||||||||||||||    
T  15619723 accttaggtcaaaaattggggtatgacac 15619695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 16417508 - 16417536
Alignment:
Q  119 cttaggtcaaaaattggggtatgacacat 147  Q
    |||||||||||||||||||||||||||||    
T  16417508 cttaggtcaaaaattggggtatgacacat 16417536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 20433803 - 20433759
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  20433803 tgacacgtgtcagtgctatcttaggtcaaaaattggggtatgaca 20433759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 20447729 - 20447685
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  20447729 tgacacgtgtcagtgctatcttaggtcaaaaattggggtatgaca 20447685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41006708 - 41006672
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  41006708 agaaaagagggtccgactcggaatcaaaaatgaggta 41006672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41015488 - 41015452
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  41015488 agaaaagagggtccgactcggaatcaaaaatgaggta 41015452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19737932 - 19738076
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||        ||| || | |||||||||||||||||||||||    
T  19737932 agaaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttc-actaaaaattcagagatcgatcagagtcaagt 19738030  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||||||||||||||  |||||||||||||||||||||||||||||    
T  19738031 gacatgtgtcagtggggccttaggtcaaaaattggggtatgacaca 19738076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 50187926 - 50187783
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    |||||||||| | ||||||||||| |||||| ||||||||||||||||||  ||||||||        |||||| |||||||||| ||||||||||||||    
T  50187926 agaaaagaggttttgactcggaataaaaaatgaggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagattgatcagagtcaagt 50187827  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  50187826 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 50187783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 20548522 - 20548381
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||  ||| ||||        |||||| |||||||||||||||||||||||||    
T  20548522 agaaaagagggtccgactcggaataaaaaatgaggtattttaaaatacctccctgtcgaatttttc--actgaaaaatcagagatcgatcagagtcaagt 20548425  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  20548424 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20548381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 3382366 - 3382510
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||  ||||||||        |||||| ||||||||||||| ||||||| ||    
T  3382366 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttttactgaaaaatcagagatcgagcagagtcgag 3382465  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  3382466 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 3382510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 3389114 - 3389259
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||   |||||||        |||||| ||||| |||||||||||  || ||    
T  3389114 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatacctccatgccgaattttttttactgaaaaatcaaagatcgatcagtatcgag 3389213  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  3389214 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacac 3389259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 20555073 - 20555005
Alignment:
Q  76 aatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  20555073 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20555005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 25984496 - 25984369
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtg 114  Q
    |||||||||||||| || |||||||||||||||||| | || ||||        |||||| ||||||||||| ||||| |||||  |||| |||||||||    
T  25984496 gactcggaatcaaacatgaggtattttaaaatacctctttgtcgaatttttc--actgaaaaatcagagatcaatcagcgtcaaacgacacgtgtcagtg 25984399  T
Q  115 gaaccttaggtcaaaaattggggtatgaca 144  Q
    | ||||||||| ||||||||||||||||||    
T  25984398 ggaccttaggttaaaaattggggtatgaca 25984369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 22175845 - 22175905
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    ||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  22175845 cgatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgacaca 22175905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 39534290 - 39534175
Alignment:
Q  27 aaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtc 126  Q
    ||||| ||||||||||||||||||  ||||||||        |||||| |||||| ||| |||||||||||| ||||| |||||||||| | ||| ||||    
T  39534290 aaaatgaggtattttaaaatacctccctgccgaatttttt--actgaaaaatcagggattgatcagagtcaaatgacacgtgtcagtgggatcttgggtc 39534193  T
Q  127 aaaaattggggtatgaca 144  Q
    ||||||||||||||||||    
T  39534192 aaaaattggggtatgaca 39534175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 39745430 - 39745486
Alignment:
Q  88 atcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  39745430 atcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 39745486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 4619293 - 4619220
Alignment:
Q  71 tgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||||||||| |||||| || || |||||||||||||||| |  |||||||||||||||||||||||||    
T  4619293 tgaaaaatcagagattgatcagggttaaatgacatgtgtcagtggtattttaggtcaaaaattggggtatgaca 4619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 14925063 - 14924994
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacacat 147  Q
    |||||||| |||||| || ||| |||| |||||||||| ||||||||| |||||||||||||||||||||    
T  14925063 tcagagattgatcagggttaagcgacacgtgtcagtgggaccttaggtaaaaaattggggtatgacacat 14924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 47522505 - 47522648
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcaga--gtcaa 98  Q
    |||||| |||| | |||||| ||| |||||| ||||||||||||||||||| ||||||||        |||||| ||||||||||| ||||||  || ||    
T  47522505 agaaaacagggcccgactcgaaataaaaaatgaggtattttaaaataccttcctgccgaa--tttttcactgaaaaatcagagatcaatcagagtgttaa 47522602  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||  ||| ||||| |||||||||||||||||| | |||||||    
T  47522603 gtgacaaatgttagtgggaccttaggtcaaaaattgagatatgaca 47522648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 10814362 - 10814307
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||    
T  10814362 aagagggtctgactcggaataaaaaatgaggtattttaaaatacctccctgccgaa 10814307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 15580490 - 15580548
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||| ||||| ||||||| |||||||| | |||||||||||||||||||||||||||    
T  15580490 gatcagggtcaaatgacatgcgtcagtgggatcttaggtcaaaaattggggtatgacac 15580548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 3836829 - 3836868
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  3836829 tgtgtcagtggaaccttaggtcaaaatttggggtatgaca 3836868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 55793251 - 55793294
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  55793251 gacaagtgtcagtgggaccttaggtcaaaaattggggtatgaca 55793294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 3439683 - 3439629
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatg 141  Q
    |||||| ||||| ||||||| |||||||| |||||||||||||||||||| ||||    
T  3439683 gatcagtgtcaaatgacatgcgtcagtgggaccttaggtcaaaaattgggatatg 3439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 15880072 - 15880110
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  15880072 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 15880110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39745353 - 39745413
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaa 60  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||  ||||||||    
T  39745353 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatacctccctgccgaa 39745413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 12427175 - 12427136
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  12427175 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 12427136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 36697260 - 36697307
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaataccttt 52  Q
    ||||||||| ||| |||||||||| || ||||||||||||||||||||    
T  36697260 aagagggtccgacccggaatcaaatatgaggtattttaaaataccttt 36697307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 41149018 - 41148979
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  41149018 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 41148979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 22703493 - 22703451
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacacat 147  Q
    |||||| |||| |||||||||||||| ||||||||||||||||    
T  22703493 tgtgtcggtgggaccttaggtcaaaatttggggtatgacacat 22703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 10220457 - 10220501
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| |||||||||   |||||||||||||||||||||||||||    
T  10220457 tgacacgtgtcagtgctgccttaggtcaaaaattggggtatgaca 10220501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 16360310 - 16360254
Alignment:
Q  5 aagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||| ||||  ||||| | ||||||||||||||||||| ||||||||    
T  16360310 aagagggtctgacttggaacaaaaaaatgaggtattttaaaataccttcctgccgaa 16360254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8120 - 7980
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | |||||||||||||| || ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  8120 agaaaagagggcccgactcggaatcaaagatgaggtattttaaaatacctccctgccgaattttt---actgaaaaatcagagatcgatcagagtcaagt 8024  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  8023 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 7980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22347008 - 22346867
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  22347008 agaaaagagggtttgactcggaataaaaaatgaggtattttaaaatacctccctgccgaatttttt--actgaaaaatcagagatcgatcagagtcaagt 22346911  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  ||||||| |||||||||||||||||||    
T  22346910 gacatgtgtcagtggggccttaggacaaaaattggggtatgaca 22346867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34139056 - 34139199
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  || |||||        |||||| ||||||||||||||||||||||||    
T  34139056 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctcccttccgaattttttt-actgaaaaatcagagatcgatcagagtcaag 34139154  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  34139155 tgacatgtgtcagtggagccttagatcaaaaattggggtatgaca 34139199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34132744 - 34132887
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  || | |||        |||||| ||||||||||||||||||||||||    
T  34132744 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctcccttctgaattttttt-actgaaaaatcagagatcgatcagagtcaag 34132842  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  34132843 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 34132887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6851934 - 6852079
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||||| ||| ||||||||||||||||| ||    
T  6851934 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttttactgaaaaattagagatcgatcagagtcgag 6852033  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
     | ||||||||||||| ||||||||| |||||||||||||||||||    
T  6852034 cggcatgtgtcagtgggaccttaggttaaaaattggggtatgacac 6852079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 1858491 - 1858632
Alignment:
Q  3 aaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtg 101  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||||| |||||||||| ||||| |||| ||||    
T  1858491 aaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagattgatcatagtcgagtg 1858589  T
Q  102 acatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  1858590 acatgtgtcagtggggccttaggtcaaaaattggggtatgaca 1858632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 18778987 - 18779131
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | |||||||| |||||||||  ||||| ||        |||||| |||||||||||||| |||||| ||    
T  18778987 agaaaagagggtccgactcggaatcaaaaaatgaggtatttaaaaatacctccctgcc-aaatttttttactgaaaaatcagagatcgattagagtcgag 18779085  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  18779086 tgacatgtgtcagcggggccttaggtcaaaaattggggtatgacac 18779131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 43906240 - 43906101
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtatttt-aaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||| | ||||||||||||||||| ||||||||| |||||||||   |||||||        |||||| |||||||||||||||||  |||||    
T  43906240 agaaaagagggcccgactcggaatcaaaaatgaggtatttttaaaatacctccttgccgaattttt---actgaaaaatcagagatcgatcaggatcaag 43906144  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatga 142  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  43906143 tgacatgtgtcagtggggccttaggtcaaaaattggggtatga 43906101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28415293 - 28415150
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||| ||||| | ||||||||||||||||||  ||||| ||        |||||| ||||||||||||||||||||| ||    
T  28415293 agaaaagagggtccgactcggaattaaaaaatgaggtattttaaaatacctccctgcc-aaatttttttactgaaaaatcagagatcgatcagagtcgag 28415195  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||| ||  |||||||| ||||||||||||||||||    
T  28415194 tgacatgtgtcagcggggccttaggtaaaaaattggggtatgaca 28415150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13270808 - 13270952
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaa--ttaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaa 98  Q
    ||||||||||||| |||||| |||||||||  | ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||| || |    
T  13270808 agaaaagagggtccgactcgaaatcaaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagactcga 13270906  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||    
T  13270907 gtgacatgtgtcagtggggccttaggtcaaaaattggaatatgaca 13270952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 1272000 - 1271941
Alignment:
Q  201 gaatgaaactactctgaaagggaccaatcaaatcatcaaagaaagagcggatacagttaa 260  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||||| |||||||| |||||    
T  1272000 gaatgaagctactttgaaaaggaccaatcaaatcatcaaggaaagggcggatacggttaa 1271941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 16265782 - 16265837
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| |||||||||||||||  || |||||||||||||||||| |||||||||    
T  16265782 aagagggcctgactcggaatcaactatgaggtattttaaaatacctctctgccgaa 16265837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 16273450 - 16273505
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| |||||||||||||||  || |||||||||||||||||| |||||||||    
T  16273450 aagagggcctgactcggaatcaactatgaggtattttaaaatacctctctgccgaa 16273505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 42631285 - 42631324
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  42631285 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 42631324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 15683190 - 15683152
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  15683190 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 15683152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 23878702 - 23878760
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  23878702 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 23878760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 6113681 - 6113640
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  6113681 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaca 6113640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10440089 - 10440029
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaat-acctttctgccgaa 60  Q
    |||||||||||||||||||||||| |||||| ||||| |||||| | |||| |||||||||    
T  10440089 agaaaagagggtctgactcggaataaaaaatgaggtactttaaagtaacctctctgccgaa 10440029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 4847209 - 4847170
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  4847209 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 4847170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 9460484 - 9460445
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  9460484 tgtgtcagtggagccttaggtcaaaatttggggtatgaca 9460445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 9474274 - 9474235
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  9474274 tgtgtcagtggagccttaggtcaaaatttggggtatgaca 9474235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 15767129 - 15767172
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  15767129 gacacgtgttagtgggaccttaggtcaaaaattggggtatgaca 15767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 8810123 - 8810065
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| |||||||||||  ||||||||| | ||| |||||||| |||||||||||||    
T  8810123 cgatcagggtcaagtgacacatgtcagtgggatcttgggtcaaaatttggggtatgaca 8810065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 8817937 - 8817879
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| |||||||||||  ||||||||| | ||| |||||||| |||||||||||||    
T  8817937 cgatcagggtcaagtgacacatgtcagtgggatcttgggtcaaaatttggggtatgaca 8817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 36898463 - 36898425
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  36898463 gtgtcagtgggaccttaagtcaaaaattggggtatgaca 36898425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 46299798 - 46299832
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccga 59  Q
    |||||||||||||||||||||||||| ||||||||    
T  46299798 caaaaattaggtattttaaaatacctctctgccga 46299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 8913405 - 8913441
Alignment:
Q  24 tcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||| |||||||||||||||||| |||||||||    
T  8913405 tcaaaaatgaggtattttaaaatacctctctgccgaa 8913441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12978607 - 12978571
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  12978607 agaaaagagggtccgactcggaatcaaaaatgaggta 12978571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 15574932 - 15574888
Alignment:
Q  201 gaatgaaactactctgaaagggaccaatcaaatcatcaaagaaag 245  Q
    ||||||| ||||| |||||||||||||||||||||| || |||||    
T  15574932 gaatgaagctactttgaaagggaccaatcaaatcataaaggaaag 15574888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 15767045 - 15767101
Alignment:
Q  5 aagagggtctgactcggaatc-aaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| | ||||||||||| |||||| ||||||||||||||||||  ||||||||    
T  15767045 aagagggcccgactcggaatccaaaaatgaggtattttaaaatacctccctgccgaa 15767101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 16402672 - 16402712
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||| ||||| |||||||||||||| ||||||||||||||    
T  16402672 tgtgttagtgggaccttaggtcaaaatttggggtatgacac 16402712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20542837 - 20542881
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaa 45  Q
    ||||||||||||| |||||||||| |||||| | |||||||||||    
T  20542837 agaaaagagggtccgactcggaataaaaaatgaagtattttaaaa 20542881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 23443799 - 23443755
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacc 49  Q
    ||||||||| |||| ||||||||| || |||||||||||||||||    
T  23443799 aagagggtccgacttggaatcaaatatgaggtattttaaaatacc 23443755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 30379104 - 30379144
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||| | |||||||||||| ||||||||||||||    
T  30379104 tgtgtcagtgggatcttaggtcaaaatttggggtatgacac 30379144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 22162912 - 22163052
Alignment:
Q  3 aaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtga 102  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||||   |||||||        |||||| |||||||||||||||||||||||||||    
T  22162912 aaaaaagggtccgactcggaatcaaaaatgaggtattttaaaatacctccatgccgaattttttc-actgaaaaatcagagatcgatcagagtcaagtga 22163010  T
Q  103 catgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  22163011 catgtgtcagtgggcccttaggtcaaaaattggggtatgaca 22163052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 22156911 - 22157043
Alignment:
Q  3 aaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtga 102  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||   |||||||          |||| |||||||||||||||||||||||||||    
T  22156911 aaaagagggtccgactcggaatcaaaaatgaggtattttaaaatacctccatgccgaat---------tgaaaaatcagagatcgatcagagtcaagtga 22157001  T
Q  103 catgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| |||||  |||||||||||||||||||||||||||    
T  22157002 catgtgttagtgggcccttaggtcaaaaattggggtatgaca 22157043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 14891801 - 14891928
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtg 114  Q
    ||||||||  ||||||| ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||||||||||||||||    
T  14891801 gactcggagccaaaaatgaggtattttaaaatacctccctgccgaattttt---actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtg 14891897  T
Q  115 gaaccttaggtcaaaaattggggtatgacac 145  Q
    |  ||||||||||||||||||||||||||||    
T  14891898 gggccttaggtcaaaaattggggtatgacac 14891928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 31999905 - 31999763
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||||| ||         |||||| ||||||||||||||||||||| |||    
T  31999905 agaaaagagggtccgactcggaataaaaaatgaggtattttaaaatacctctctgcaga-ttttttttactgaaaaatcagagatcgatcagagtcgagt 31999807  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
     ||||||||||  || | ||||||||||||||||||||||||||    
T  31999806 tacatgtgtcaacgggatcttaggtcaaaaattggggtatgaca 31999763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 32025576 - 32025719
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||  ||||||||        |||||| |||||||||||||||||| || ||    
T  32025576 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagaatcgag 32025674  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||   ||||||||||||||||||||||||||    
T  32025675 tgacatgtgtcagtggggtcttaggtcaaaaattggggtatgaca 32025719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 20733276 - 20733160
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttagg 124  Q
    ||||||| |||||||||||||||||| |||||||||        |||||| ||||||||||||||||||||||||||||| |||||| |||  |||||||    
T  20733276 caaaaatgaggtattttaaaatacctctctgccgaattttc---actgaaaaatcagagatcgatcagagtcaagtgacacgtgtcaatggggccttagg 20733180  T
Q  125 tcaaaaattggggtatgaca 144  Q
    ||||||||||||||||||||    
T  20733179 tcaaaaattggggtatgaca 20733160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 25859197 - 25859340
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaa-tacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaa 98  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||| |||||  ||||||||        | |||| ||||||||||||||||||||| |    
T  25859197 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaaatacctacctgccgaatttttt--aatgaaaaatcagagatcgatcagagtcga 25859294  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||    
T  25859295 gtgacatgtgacagtggggccttaggtcaaaaattggggtatgaca 25859340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15061259 - 15061401
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataa-tcagagatcgatcagagtcaag 99  Q
    ||||||||||| | |||||||||| |||||| ||||||||||||||||||  ||||||||        | |||| || |||||||||||||||||| |||    
T  15061259 agaaaagagggcccgactcggaataaaaaatgaggtattttaaaatacctccctgccgaatttttc--attgaaaaaatcagagatcgatcagagttaag 15061356  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||    
T  15061357 tgacacgtgtcagtggggccttaggtcaaaaattggggtatgaca 15061401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 32006875 - 32006734
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||| | |||||||||| |||||| |||||||||||||||||  |||||||||        |||||| ||||| ||||||||||||||| |||    
T  32006875 agaaaagagggcccgactcggaataaaaaatgaggtattttaaaataccactctgccgaattttttt-actgaaaaatcacagatcgatcagagtcgagt 32006777  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    || ||||||||| ||   ||||||||||||||||||||||||||    
T  32006776 gatatgtgtcagcgg-gtcttaggtcaaaaattggggtatgaca 32006734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 20725314 - 20725198
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttagg 124  Q
    ||||||| |||||||||||||||||| ||||| |||        |||||| ||||||||||||||||||||||||||||| |||| ||| |  |||||||    
T  20725314 caaaaatgaggtattttaaaatacctctctgctgaattttc---actgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttagg 20725218  T
Q  125 tcaaaaattggggtatgaca 144  Q
    | ||||||| ||||||||||    
T  20725217 taaaaaatttgggtatgaca 20725198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 20738212 - 20738096
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttagg 124  Q
    ||||||| |||||||||||||||||| ||||| |||        |||||| ||||||||||||||||||||||||||||| |||| ||| |  |||||||    
T  20738212 caaaaatgaggtattttaaaatacctctctgctgaattttc---actgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttagg 20738116  T
Q  125 tcaaaaattggggtatgaca 144  Q
    | ||||||| ||||||||||    
T  20738115 taaaaaatttgggtatgaca 20738096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 25852952 - 25853095
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataa-tcagagatcgatcagagtcaa 98  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||  ||||||||        |||||| || | ||||||||||||||||| |    
T  25852952 agaaaagagggtccgactcgaaatcaaaaaatgaggtattttaaaatacctccctgccgaatttttt--actgaaaaaattagagatcgatcagagtcga 25853049  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||  || ||||  |||||||| |||||||||    
T  25853050 gtgacatgtgtcagtggggccgtaggcaaaaaattgaggtatgaca 25853095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 25766219 - 25766164
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||    
T  25766219 aagagggtctgactcggaataaaaaatgaggtattttaaaatacctccctgccgaa 25766164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 25795713 - 25795658
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| | |||||||    
T  25795713 aagagggtctgactcggaataaaaaatgaggtattttaaaatacctctatgccgaa 25795658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 24487931 - 24487981
Alignment:
Q  94 gtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||||||    
T  24487931 gtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtatgaca 24487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 6030905 - 6030848
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||| ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  6030905 gatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtaagaca 6030848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 12307679 - 12307737
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  12307679 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 12307737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 25642993 - 25642947
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||    
T  25642993 tgacatgtgtcagtgctatcttaggtcaaaaattggggtatgacaca 25642947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 3219505 - 3219470
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||||||||||||||||||||||| |||||||||    
T  3219505 caaaaattaggtattttaaaatacctctctgccgaa 3219470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 15707177 - 15707138
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  15707177 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 15707138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 18433069 - 18433030
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  18433069 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 18433030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 23267953 - 23267992
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  23267953 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 23267992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 23816699 - 23816745
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||| |||||| |||  ||||||||||||||||||||||||||||||    
T  23816699 tgacgtgtgtcggtgtgaccttaggtcaaaaattggggtatgacaca 23816745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 12844085 - 12844032
Alignment:
Q  5 aagagggtctgactcggaatcaaaa-attaggtattttaaaatacctttctgcc 57  Q
    ||||||| | ||||||||| ||||| || |||||||||||||||||||||||||    
T  12844085 aagagggcccgactcggaaccaaaatatgaggtattttaaaatacctttctgcc 12844032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 25371951 - 25371914
Alignment:
Q  13 ctgactcggaatcaaaaattaggtattttaaaatacct 50  Q
    |||||||||||||||| || ||||||||||||||||||    
T  25371951 ctgactcggaatcaaatatgaggtattttaaaatacct 25371914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 12844011 - 12843947
Alignment:
Q  81 gagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||| ||| ||| || ||||| |||||||||    |||||||||||||||||||||||||||    
T  12844011 gagatcggtcaaagttaaatgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacac 12843947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30938434 - 30938398
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggta 37  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  30938434 agaaaagagggtccgactcggaatcaaaaatgaggta 30938398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1922 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1922
Description:

Target: scaffold1922; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 139 - 281
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||||||  | ||||||        |||||| |||||||||||||||||||||||||    
T  139 agaaaagagggtccgactcgtaatcaaaaataaggtattttaaaatacctcccagccgaattttttc-actgaaaaatcagagatcgatcagagtcaagt 237  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  | |||||||||||||||||||||||||    
T  238 gacatgtgtcagtggggcattaggtcaaaaattggggtatgaca 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 23724 - 23583
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||  ||| ||||        | |||| |||||||||||||||||||||||||    
T  23724 agaaaagagggtccgactcggaataaaaaatgaggtattttaaaatacctccctgtcgaatttttc--attgaaaaatcagagatcgatcagagtcaagt 23627  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  23626 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 23583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 397 - 455
Alignment:
Q  86 cgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||| ||||||||||| |||||||||| | ||| |||||||| |||||||||||||    
T  397 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 98 - 242
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||||| ||||||||||||||||||||| ||    
T  98 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttatactgaaaaatcagagatcgatcagagtcgag 197  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||| |||||||||   |||||||||||||||||||||||||||    
T  198 tgacaagtgtcagtgaggccttaggtcaaaaattggggtatgaca 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 6244 - 6388
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    |||||||||||| |||| |||||| |||||| || |||||||||||||||  ||||||||        |||||| |||||||||||||||||||||||||    
T  6244 agaaaagagggtttgacacggaataaaaaatgagatattttaaaatacctccctgccgaattttttt-actgaaaaatcagagatcgatcagagtcaagt 6342  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||    
T  6343 gacatgtgtcagtggggccttaggacaaaaattggggtatgacaca 6388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 7718 - 7864
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnn--actgaataatcagagatcgatcagagtca 97  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||          |||||| ||||||||||||||||||||||    
T  7718 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctcgctgccgaaaaaaaatttcactgaaaaatcagagatcgatcagagtca 7817  T
Q  98 agtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||    
T  7818 agtgacatgtgttagtggggccttaggtcaaaaattggggtatgaca 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 14240 - 14099
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||| | ||||||||||||||||||||||||    
T  14240 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttt---actggaaaatcagagatcgatcagagtcaag 14144  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||    
T  14143 tgacatgtgtcagtggggccttaggtcaaaaattgaggtatgaca 14099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 58598 - 58643
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacct 50  Q
    ||||||||  |||||||||||||| || ||||||||||||||||||    
T  58598 aagagggttcgactcggaatcaaatatgaggtattttaaaatacct 58643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 38519 - 38664
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnn-actgaataatcagagatcgatcagagtcaa 98  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||| ||  ||||||||         |||||| ||||||||||||||||||||| |    
T  38519 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatatctccctgccgaatttttttttactgaaaaatcagagatcgatcagagtcga 38618  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  38619 gtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 38664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 89796 - 89937
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||        |||||| |||||||||||||| |||||||||    
T  89796 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgccgaattttttc-actgaaaaatcagagatcgataagagtcaag 89894  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatga 142  Q
    |||||| |||||||||  |||||||||||||||||||||||||    
T  89895 tgacatatgtcagtggggccttaggtcaaaaattggggtatga 89937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 86618 - 86762
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||| ||||| | ||||||||||||||||||  ||||||||        ||| || ||||||||||||||||||||| ||    
T  86618 agaaaagagggtccgactcggaattaaaaaatgaggtattttaaaatacctccctgccgaattttttttactaaaaaatcagagatcgatcagagtcgag 86717  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||    
T  86718 tgacatgtgtcagtggggccttaggtcaaaaattagggtatgaca 86762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27636 - 27783
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnn-actgaataatcagagatcgatcagagtcaa 98  Q
    ||||||||||||| |||||||||||||||| | ||| ||||||||||| ||  ||||||||         |||||| ||||||||||||||||||||| |    
T  27636 agaaaagagggtccgactcggaatcaaaaaatgaggaattttaaaataactccctgccgaatttttttttactgaaaaatcagagatcgatcagagtcga 27735  T
Q  99 gtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaca 146  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  27736 gtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaca 27783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 41192 - 41330
Alignment:
Q  7 gagggtctgactcggaatcaaa---aattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgac 103  Q
    ||||||| ||||||||| ||||   ||| |||||||||||||||||| |||| ||||        |||||| |||||||||| |||||| || ||  |||    
T  41192 gagggtccgactcggaaccaaagaaaatgaggtattttaaaatacctctctgtcgaatttttc--actgaaaaatcagagattgatcagggttaaacgac 41289  T
Q  104 atgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
      |||||||||| | ||||||||||||||||||||||||||    
T  41290 gcgtgtcagtgggatcttaggtcaaaaattggggtatgaca 41330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 10482 - 10338
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||  ||        |||||| ||||||||||||||||||||| ||    
T  10482 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgct-aaatttttttactgaaaaatcagagatcgatcagagtcgag 10384  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  10383 tgacatgtgtcagcggggccttaggtcaaaaattggggtatgacac 10338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 19907 - 19763
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaatt-aggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaag 99  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||  ||        |||||| ||||||||||||||||||||| ||    
T  19907 agaaaagagggtccgactcggaatcaaaaaatgaggtattttaaaatacctccctgct-aaatttttttactgaaaaatcagagatcgatcagagtcgag 19809  T
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  19808 tgacatgtgtcagcggggccttaggtcaaaaattggggtatgacac 19763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 96857 - 96781
Alignment:
Q  69 actgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  96857 actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacac 96781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 4807 - 4775
Alignment:
Q  108 gtcagtggaaccttaggtcaaaaattggggtat 140  Q
    |||| ||||||||||||||||||||||||||||    
T  4807 gtcaatggaaccttaggtcaaaaattggggtat 4775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 4884 - 4840
Alignment:
Q  15 gactcggaatcaaaaattaggtattttaaaatacctttctgccga 59  Q
    |||||||| |||||||| |||||||||||||| |||| |||||||    
T  4884 gactcggattcaaaaatgaggtattttaaaatgccttcctgccga 4840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 22121 - 22046
Alignment:
Q  69 actgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  22121 actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 22046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 65957 - 65837
Alignment:
Q  24 tcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttag 123  Q
    |||||||| ||||||||||||||||||  ||||||||        | |||| |||||||||||||||||||||||||||||||||| |||||  ||||||    
T  65957 tcaaaaatgaggtattttaaaatacctccctgccgaattttttcaa-tgaaaaatcagagatcgatcagagtcaagtgacatgtgtgagtggggccttag 65859  T
Q  124 gtcaaaaattggggtatgacac 145  Q
    ||||||||||||||||||||||    
T  65858 gtcaaaaattggggtatgacac 65837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 9155 - 9229
Alignment:
Q  71 tgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  9155 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaattggggtatgacac 9229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 15786 - 15644
Alignment:
Q  1 agaaaagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagt 100  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||     | ||||        |||||| ||||| |||||||||||||||||||    
T  15786 agaaaagagggtttgactcggaataaaaaatgaggtattttaaaataccccctcgtcgaattttttt-actgaaaaatcatagatcgatcagagtcaagt 15688  T
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||||||||  ||||||  |||||||||||||||||||    
T  15687 gacatgtgtcagtggggccttagaacaaaaattggggtatgaca 15644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 7633 - 7706
Alignment:
Q  71 tgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||    
T  7633 tgaaaaatcagagatcgatcagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattagggtatgaca 7706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 1370 - 1434
Alignment:
Q  71 tgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattgg 135  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  1370 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattgg 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 298 - 353
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  298 aagagggtccgactcggaatcaaatatgaggtattttaaaatacctttctgccgaa 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 2528 - 2471
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||||    
T  2528 gatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtatgaca 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 25718 - 25761
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacacata 148  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  25718 tgtgtcagtgggaccttaggtcaaaaattggggtatgacacata 25761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 17799 - 17838
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  17799 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 17838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 11527 - 11469
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||||| ||||| |||||||||| |||||  ||||||||||||||||||||||||||||    
T  11527 gatcagggtcaaatgacatgtgttagtgggtccttaggtcaaaaattggggtatgacac 11469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 30699 - 30765
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||| ||| || || ||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  30699 tcagagattgattagggttaagcgacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 30765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 41664 - 41730
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||| ||| || || ||| |||| |||| ||||| ||||||||||||||||||||||||||||    
T  41664 tcagagattgattagggttaagcgacacgtgttagtgggaccttaggtcaaaaattggggtatgaca 41730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 38088 - 38138
Alignment:
Q  94 gtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  38088 gtcaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgaca 38138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 20251 - 20212
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  20251 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 20212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 33992 - 33953
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  33992 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 33953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 9280 - 9337
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||| ||||||| |||||||  ||||||||||||||||||||||||||||    
T  9280 gatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgaca 9337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 843 - 770
Alignment:
Q  71 tgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||||||||| |||||| || ||  |||  |||||||||| ||||||||||||||||||||||||||||    
T  843 tgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaattggggtatgaca 770  T

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Target: scaffold0378; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 3374 - 3336
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  3374 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 3336  T

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Target: scaffold0378; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 15854 - 15816
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  15854 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 15816  T

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Target: scaffold0101 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 16530 - 16603
Alignment:
Q  71 tgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||||||||| |||||| || ||  |||  |||||||||| ||||||||||||||||||||||||||||    
T  16530 tgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaattggggtatgaca 16603  T

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Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 29103 - 29178
Alignment:
Q  69 actgaataatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| |||||||||| |||||| || ||  |||  |||||||||| ||||||||||||||||||| ||||||||    
T  29103 actgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaattggagtatgaca 29178  T

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Target: scaffold0435 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 8302 - 8438
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaannnnnnnnactgaataatcagagatcgatcagagtcaagtgaca 104  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||| |||        |||||| | |  |||| ||| ||| || || |||||    
T  8302 aagagggtccgactcggaattaaaa-ttaggtatttcaaaatacctctctgctgaaattttc--actgaaaagttggagaccgaacagggttaaatgaca 8398  T
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| |||  ||||||||||||||||||||||||||||    
T  8399 tgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 8438  T

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Target: scaffold1888 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1888
Description:

Target: scaffold1888; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 1058 - 1115
Alignment:
Q  87 gatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||| ||||||||||| ||||| |||| | ||| ||||||||||||||||||||||    
T  1058 gatcagggtcaagtgacacgtgtcggtgggatcttgggtcaaaaattggggtatgaca 1115  T

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Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 150634 - 150690
Alignment:
Q  89 tcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacac 145  Q
    ||||||| || |||||||||||||||    |||||||||||||||||||||||||||    
T  150634 tcagagttaaatgacatgtgtcagtgttgtcttaggtcaaaaattggggtatgacac 150690  T

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Target: scaffold1890 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1890
Description:

Target: scaffold1890; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 876 - 931
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||||| |||||||||  |||||| |||||| ||||||||||| |||||||||    
T  876 aagagggtccgactcggaacaaaaaatgaggtatattaaaatacctctctgccgaa 931  T

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Target: scaffold1719 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1719
Description:

Target: scaffold1719; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 17 - 56
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  17 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 56  T

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Target: scaffold0605 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 9360 - 9403
Alignment:
Q  101 gacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
T  9360 gacaagtgtcagtgggaacttaggtcaaaaattggggtatgaca 9403  T

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Target: scaffold0431 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 2800 - 2839
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  2800 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 2839  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 9021 - 9076
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| | |||||||||||||| || ||||||||||||||||||  ||||||||    
T  9021 aagagggcccgactcggaatcaaatatgaggtattttaaaatacctccctgccgaa 9076  T

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Target: scaffold0186 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 15680 - 15715
Alignment:
Q  25 caaaaattaggtattttaaaatacctttctgccgaa 60  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15680 caaaaatgaggtattttaaaatacctttctgccgaa 15715  T

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Target: scaffold0182 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 1754 - 1715
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  1754 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 1715  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 9209 - 9248
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  9209 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 9248  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 18233 - 18276
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaatac 48  Q
    ||||||||| |||||||||||||| || ||||||||||||||||    
T  18233 aagagggtccgactcggaatcaaacatgaggtattttaaaatac 18276  T

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Target: scaffold0503 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 1944 - 1982
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  1944 gtgtcagtgagaccttaggtcaaaaattggggtatgaca 1982  T

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Target: scaffold0503; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 6511 - 6549
Alignment:
Q  106 gtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  6511 gtgtcagtgagaccttaggtcaaaaattggggtatgaca 6549  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 3832 - 3766
Alignment:
Q  78 tcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    |||||||| |||||| || ||| ||||  ||| |||||  |||||||||||||||||||||||||||    
T  3832 tcagagattgatcagggttaagcgacacatgttagtgggcccttaggtcaaaaattggggtatgaca 3766  T

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Target: scaffold0183 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 20711 - 20678
Alignment:
Q  112 gtggaaccttaggtcaaaaattggggtatgacac 145  Q
    |||| |||||||||||||||||||||||||||||    
T  20711 gtgggaccttaggtcaaaaattggggtatgacac 20678  T

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Target: scaffold0104 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 38567 - 38604
Alignment:
Q  107 tgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  38567 tgtcagtgggaccttaggtcaaaaattcgggtatgaca 38604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 362893 - 362922
Alignment:
Q  117 accttaggtcaaaaattggggtatgacaca 146  Q
    ||||||||||||||||||||||||||||||    
T  362893 accttaggtcaaaaattggggtatgacaca 362922  T

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Target: scaffold0540 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 2839 - 2891
Alignment:
Q  8 agggtctgactcggaatcaaaaattaggtattttaaaatacctttctgccgaa 60  Q
    |||||| |||||||| |||| ||| ||||||||||||||||| | ||||||||    
T  2839 agggtccgactcggattcaataatgaggtattttaaaataccctcctgccgaa 2891  T

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Target: scaffold0362 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 4815 - 4859
Alignment:
Q  100 tgacatgtgtcagtggaaccttaggtcaaaaattggggtatgaca 144  Q
    ||||||||||| |||  |||||||||||||||||| |||||||||    
T  4815 tgacatgtgtcggtgtgaccttaggtcaaaaattgtggtatgaca 4859  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 846 - 902
Alignment:
Q  5 aagagggtctgactcggaatcaaaaattaggtattttaaaat-acctttctgccgaa 60  Q
    ||||||| | ||||||||||||||||| |||||||| ||| | ||||||||||||||    
T  846 aagagggcccgactcggaatcaaaaatgaggtatttcaaagtaacctttctgccgaa 902  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 202701 - 202745
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacacatat 149  Q
    ||||||||||| ||||| |||||||| ||||||||||||| ||||    
T  202701 tgtgtcagtgggacctttggtcaaaatttggggtatgacagatat 202745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 208778 - 208822
Alignment:
Q  105 tgtgtcagtggaaccttaggtcaaaaattggggtatgacacatat 149  Q
    ||||||||||| ||||| |||||||| ||||||||||||| ||||    
T  208778 tgtgtcagtgggacctttggtcaaaatttggggtatgacagatat 208822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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