View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13475_low_8 (Length: 326)
Name: NF13475_low_8
Description: NF13475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13475_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 312
Target Start/End: Original strand, 45378369 - 45378665
Alignment:
| Q |
13 |
agaagcagagacgatttgatttaagatgaagataactgagaaaacggttaaacgagtaaagtttgttgaggttcaaactacctaggtatttggcgtatgc |
112 |
Q |
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| T |
45378369 |
agaagcagagacgatttgatttaagatgaagataactgagaaaacggttaaacgagtaaagtttgttcaggttcaaactacataggtatttggcgtatgc |
45378468 |
T |
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| Q |
113 |
aagtggaattctttctaaacaataggaatggtccctctctcatatacaattaataataaataatgtttgtgatgaaatgaatcgagggacacgtggaaag |
212 |
Q |
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| T |
45378469 |
aagtgcaattctttctaaacaataggaatggtccctctctcatatacaat---taataaataatgtttctgatgaaatgaatcgagggacacgtggaaag |
45378565 |
T |
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| Q |
213 |
agaagagttggtattggattctgccttggacgtgtcacatttagtttagcaccgtccagataataaataatatgtcatcttatttagtttgtttcatgat |
312 |
Q |
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| T |
45378566 |
agaagagttggtattggattctgccttggacgtgtcatatttagtttagcaccgtccagatgataaataatatgtcatcttatttagtttgtttcatgat |
45378665 |
T |
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