View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13481_high_7 (Length: 238)
Name: NF13481_high_7
Description: NF13481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13481_high_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 3229589 - 3229825
Alignment:
| Q |
1 |
aatatgaaagtacactacatacaaaaaggtatgaaatttggtttattgactaaaatatgcttcctatggggctaaggtaatattttctacattttcttcc |
100 |
Q |
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| T |
3229589 |
aatatgaaagtacactacatacaaaaaggtatgaaatttggtt-attgactaaaatatgcttcctatggggctaaggtaatattttctacattttcttcc |
3229687 |
T |
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| Q |
101 |
atttattattgtatggaaatggtctttagctttgttgttaagttagacaacagtcgtccatgtttaaaatatattaagacaacagttcattacaaaataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3229688 |
atttattattgtatggaaatggtctttagctttgttgttaagttagacaacagtcgtccatgtttaaaatatattaagacaacagttcattacaaaataa |
3229787 |
T |
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| Q |
201 |
aagttagacaacaaatacttttactaagttaaaacatt |
238 |
Q |
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||||||||||||||||||||||| |||||||||||||| |
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| T |
3229788 |
aagttagacaacaaatacttttattaagttaaaacatt |
3229825 |
T |
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