View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13484_high_8 (Length: 306)
Name: NF13484_high_8
Description: NF13484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13484_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 17 - 298
Target Start/End: Original strand, 34932717 - 34932998
Alignment:
| Q |
17 |
aagtaatattaaagaactagaatacgcacaaagaaactaaaatagtgaaactagaattaaaagaaagcatttgctacaggccccagaaaagcttgcctcg |
116 |
Q |
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| T |
34932717 |
aagtaatattaaagaactagaatacgcacaaagaatctaaaattgtgaaactagaatcaaaagaaagcatttgctacaggccccagaaaagcttgcctcg |
34932816 |
T |
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| Q |
117 |
gctttaaacacaggaatgttgtcgaacatgtgcgcaggagttattccgtgtgcgtatctcgatgggcatcccgctgagtatctcatctttgcgctataga |
216 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
34932817 |
gctttaaacacaggaaggttgtcgaacatgtgcgcaggagttattccgtgtgtgtatctcgatgggcatcccgctgagtatctcatctttgcactataga |
34932916 |
T |
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| Q |
217 |
tgttgaagatttgggagagagtcggcttcgcagataatatgaaagaacagaattgttagatggtaattagatgatgatgatg |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
34932917 |
tgttgaagatttgggagagagtcggcttcgcagataatatgaaagaacaaaattgttagatggtaattagatgatgatgatg |
34932998 |
T |
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