View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13484_low_11 (Length: 293)
Name: NF13484_low_11
Description: NF13484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13484_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 34870808 - 34870582
Alignment:
| Q |
1 |
tcatcacgagaataaccccaatctaaaaattaatgagcatagaatcctgacacacgtggttgtgtagaatcattactattttcttaaattattatcagtg |
100 |
Q |
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| T |
34870808 |
tcatcacgagaataaccccaatccaaaaattaatgagcataaaatcctgacacacgtggttgtgtagaatcactactattttctcaaattattatcagtg |
34870709 |
T |
|
| Q |
101 |
tttgtgtgtcgacatcaatgttgtatccaatgtgagggatgcatagcacatgacatgatccctttacatgacttcctcttatacttgcatgtcgattttg |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
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| T |
34870708 |
tttgtgtgtcgacatcaatgtcgtatccaatgtgagggatgcatagcacatgacatgatccctttacatgacttcctcttatacttgcatgtggagtttg |
34870609 |
T |
|
| Q |
201 |
gtgaagaaattggtgaaatttgatgga |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
34870608 |
gtgaagaaattggtgaaatttgatgga |
34870582 |
T |
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