View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13486_high_4 (Length: 279)

Name: NF13486_high_4
Description: NF13486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13486_high_4
NF13486_high_4
[»] chr5 (4 HSPs)
chr5 (27-279)||(34101709-34101961)
chr5 (140-219)||(26382359-26382438)
chr5 (153-219)||(1102131-1102196)
chr5 (85-121)||(22811078-22811114)
[»] chr6 (1 HSPs)
chr6 (41-219)||(3524921-3525099)
[»] chr1 (6 HSPs)
chr1 (84-220)||(5268215-5268350)
chr1 (153-219)||(441653-441718)
chr1 (86-147)||(5407876-5407937)
chr1 (82-179)||(18325060-18325157)
chr1 (85-121)||(4347036-4347072)
chr1 (85-121)||(29988399-29988435)
[»] chr4 (3 HSPs)
chr4 (216-279)||(13873092-13873157)
chr4 (82-146)||(33843780-33843844)
chr4 (85-121)||(36150627-36150663)
[»] chr2 (7 HSPs)
chr2 (85-219)||(4908787-4908920)
chr2 (86-146)||(15220817-15220877)
chr2 (83-177)||(4119380-4119474)
chr2 (85-121)||(10918650-10918686)
chr2 (85-121)||(12110921-12110957)
chr2 (85-121)||(23359955-23359991)
chr2 (82-146)||(44439323-44439387)
[»] chr3 (6 HSPs)
chr3 (82-147)||(35253419-35253484)
chr3 (41-118)||(24916581-24916658)
chr3 (85-121)||(7012678-7012714)
chr3 (85-121)||(30301216-30301252)
chr3 (83-135)||(41591306-41591358)
chr3 (85-121)||(42644300-42644336)
[»] chr7 (5 HSPs)
chr7 (85-121)||(15311230-15311266)
chr7 (82-148)||(12306790-12306856)
chr7 (82-135)||(33853436-33853489)
chr7 (84-145)||(45557435-45557496)
chr7 (86-146)||(40561714-40561774)
[»] scaffold0172 (1 HSPs)
scaffold0172 (85-121)||(15284-15320)
[»] chr8 (1 HSPs)
chr8 (85-121)||(19649232-19649268)


Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 27 - 279
Target Start/End: Complemental strand, 34101961 - 34101709
Alignment:
Q  27 gttttgcagtgaataaaattaatttttaatgaattaattatgtgaaactgtttcgggctaaaagtgagttgaatctatagtgatttatgtttggaaacga 126  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  34101961 gttttgcagtgacacaaattaatttttaatgaattaattatgtgaaactgtttcaggctaaaagtgagttgaatctatagtgatttatgtttggaaacgt 34101862  T
Q  127 tcatgtaaatgtgagttgaatagtacattcaaggctaaaaatcaattatagaagccaaaatttacaaattctagttttaagttaaaatcaatttagtgag 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34101861 tcatgcaaatgtgagttgaatagtacattcaaggctaaaaatcaattatagaagccaaaatttacaaattctagttttaagttagaatcaatttagtgag 34101762  T
Q  227 attgtggtgtttgactataaattattccatcccttctgtggctcccttgttct 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34101761 attgtggtgtttgactataaattattccatcccttctgtggctcccttgttct 34101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 26382438 - 26382359
Alignment:
Q  140 agttgaatagtacattcaaggctaaaaatcaattatagaagccaaaatttacaaattctagttttaagttaaaatcaatt 219  Q
    ||||||| |||| |||||||| |||||||||||  ||| |  |||||||| |||||||||| || |||||||||||||||    
T  26382438 agttgaacagtaaattcaaggataaaaatcaatggtaggatgcaaaattttcaaattctagcttgaagttaaaatcaatt 26382359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 1102196 - 1102131
Alignment:
Q  153 attcaaggctaaaaatcaattatagaagccaaaatttacaaattctagttttaagttaaaatcaatt 219  Q
    ||||||||||| ||| |||||||||||| |||||  ||||||| |||| || |||||||||||||||    
T  1102196 attcaaggctataaa-caattatagaagtcaaaagctacaaatcctagcttcaagttaaaatcaatt 1102131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 22811114 - 22811078
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  22811114 taaaagtgagttgaatgtaaagtgatttatgtttgga 22811078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 3525099 - 3524921
Alignment:
Q  41 aaaattaatttttaatgaattaattatgtgaaactgtttcgggctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtga 140  Q
    |||||||||||| |||||||| ||||||| ||| || ||  |||||||||||||||||||  | | || ||||| |||| | ||  | ||||||| || |    
T  3525099 aaaattaattttgaatgaattgattatgtaaaattgattgtggctaaaagtgagttgaatgcaaactggtttatatttgaatacatttatgtaaaagtca 3525000  T
Q  141 gttgaatagtacattcaaggctaaaaatcaattatagaagccaaaatttacaaattctagttttaagttaaaatcaatt 219  Q
    ||||||   || ||| ||||||||||||| ||| ||||||||||||  |||||||||||| || |||||| ||| ||||    
T  3524999 gttgaacgataaattgaaggctaaaaatcgattctagaagccaaaaactacaaattctagcttaaagttagaattaatt 3524921  T

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Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 5268350 - 5268215
Alignment:
Q  84 ctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaatagtacattcaaggctaaaaatcaattatagaagcca 183  Q
    ||||||||||||||||| || |||||||| |||||| | |   ||||||||| |||||||||| | |  |||||||||||| || ||||| ||||||||     
T  5268350 ctaaaagtgagttgaatgtaaagtgatttttgtttgaatatattcatgtaaaagtgagttgaaaaatgaattcaaggctaagaaccaattgtagaagccc 5268251  T
Q  184 aaatttacaaattctagttttaagttaaaatcaattt 220  Q
    |||  |||||||||||| ||  ||||| |||||||||    
T  5268250 aaa-gtacaaattctagcttcgagttagaatcaattt 5268215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 441653 - 441718
Alignment:
Q  153 attcaaggctaaaaatcaattatagaagccaaaatttacaaattctagttttaagttaaaatcaatt 219  Q
    ||||||| ||||||||||||| ||||||||||||  || ||||||||| ||||||||| ||||||||    
T  441653 attcaagtctaaaaatcaattgtagaagccaaaa-ctataaattctagctttaagttagaatcaatt 441718  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 5407937 - 5407876
Alignment:
Q  86 aaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaat 147  Q
    |||||||| |||||| |  ||||||||||||||||||| | ||||||||| |||| ||||||    
T  5407937 aaaagtgaattgaatgtgaagtgatttatgtttggaaaggttcatgtaaaagtgatttgaat 5407876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 18325060 - 18325157
Alignment:
Q  82 ggctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaatagtacattcaaggctaaaaatcaattatagaa 179  Q
    |||||||||| | |||||| || |||||||||||| |||| ||  ||||||||| ||| |||||||| || ||   ||| |||||||||||| |||||    
T  18325060 ggctaaaagtcacttgaatataaagtgatttatgtatggatacattcatgtaaaagtgggttgaataataaatctgaggataaaaatcaattgtagaa 18325157  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 4347072 - 4347036
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  4347072 taaaagtgagttgaatgtaaagtgatttatgtttgga 4347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 29988435 - 29988399
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  29988435 taaaagtgagttgaatgtatagtgatttgtgtttgga 29988399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 13873157 - 13873092
Alignment:
Q  216 aatttagtgagattgtggtgttt-gact-ataaattattccatcccttctgtggctcccttgttct 279  Q
    |||||| |||||||||||||||| |||| |||||||| |||||||||| |||||||||||||||||    
T  13873157 aatttaatgagattgtggtgttttgacttataaattactccatcccttatgtggctcccttgttct 13873092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 33843844 - 33843780
Alignment:
Q  82 ggctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaa 146  Q
    |||||||||||||||| || || ||||||||||||||||| |   ||||||||  ||||||||||    
T  33843844 ggctaaaagtgagttggatgtaaagtgatttatgtttggatatattcatgtaatagtgagttgaa 33843780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 36150663 - 36150627
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  36150663 taaaagtgagttgaatgtaaagtgatttatgtttgga 36150627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 4908920 - 4908787
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaatagtacattcaaggctaaaaatcaattatagaagccaa 184  Q
    ||||||||||||  || || ||||||||||||||||| ||  |||||| || |||  ||||| | || | | |||||| |||||||||| |||||||| |    
T  4908920 taaaagtgagtttcatgtaaagtgatttatgtttggatacattcatgttaaagtggattgaacaataaagttaaggctgaaaatcaattgtagaagcc-a 4908822  T
Q  185 aatttacaaattctagttttaagttaaaatcaatt 219  Q
    ||| |||||||| ||| ||||||||| ||| ||||    
T  4908821 aatctacaaattttagctttaagttagaataaatt 4908787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 15220817 - 15220877
Alignment:
Q  86 aaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaa 146  Q
    ||||||||||||||| || ||||||||||||||||| ||  |||||| || ||||||||||    
T  15220817 aaaagtgagttgaatgtaaagtgatttatgtttggatacattcatgttaaagtgagttgaa 15220877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 4119380 - 4119474
Alignment:
Q  83 gctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaatagtacattcaaggctaaaaatcaattatag 177  Q
    |||||||||||||  ||| || ||||||||||||||| | ||  ||||||||  |||| ||||  | |||||||| |||||||| ||||||||||    
T  4119380 gctaaaagtgagtctaatgtaaagtgatttatgtttgaatacattcatgtaagcgtgaattgatcaatacattcatggctaaaagtcaattatag 4119474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 10918686 - 10918650
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  10918686 taaaagtgagttgaatgtaaagtgatttatgtttgga 10918650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 12110957 - 12110921
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  12110957 taaaagtgagttgaatataaagtgatttatgtttgga 12110921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 23359955 - 23359991
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  23359955 taaaagtgagttgaatgtaaagtgatttatgtttgga 23359991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 44439387 - 44439323
Alignment:
Q  82 ggctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaa 146  Q
    ||||| ||||||||| ||| || ||||||||||||||||| | | | ||||||| ||||||||||    
T  44439387 ggctataagtgagttaaatgtaaagtgatttatgtttggatatgtttatgtaaaagtgagttgaa 44439323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 35253419 - 35253484
Alignment:
Q  82 ggctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaat 147  Q
    |||||||| |||||| ||  || |||||||||| ||||||||| |||||||||| |||||||||||    
T  35253419 ggctaaaattgagtttaaggtaaagtgatttatatttggaaacaatcatgtaaaagtgagttgaat 35253484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 24916658 - 24916581
Alignment:
Q  41 aaaattaatttttaatgaattaattatgtgaaactgtttcgggctaaaagtgagttgaatctatagtgatttatgttt 118  Q
    |||||||||||| || || || ||| ||| ||| || ||| ||||||||||||||||||| || | ||||||||||||    
T  24916658 aaaattaattttgaacgagttgattttgtaaaattgattcaggctaaaagtgagttgaatgtaaaatgatttatgttt 24916581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 7012714 - 7012678
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  7012714 taaaagtgagttgaatgtaaagtgatttatgtttgga 7012678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 30301216 - 30301252
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| |||||||| |||||||||||    
T  30301216 taaaagtgagttgaatgtatagtgaattatgtttgga 30301252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 41591306 - 41591358
Alignment:
Q  83 gctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaa 135  Q
    ||||||| |||||||||| || ||||||||||||||||| ||  |||||||||    
T  41591306 gctaaaaatgagttgaatttaaagtgatttatgtttggatacattcatgtaaa 41591358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 42644336 - 42644300
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  42644336 taaaagtgagttgaatgtaaagtgatttatgtttgga 42644300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 15311230 - 15311266
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| ||||||||||||||||||||    
T  15311230 taaaagtgagttgaatgtatagtgatttatgtttgga 15311266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 12306856 - 12306790
Alignment:
Q  82 ggctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaata 148  Q
    ||||||||||||||||||  || ||||||||||||||||  |   ||||||||| ||||||||||||    
T  12306856 ggctaaaagtgagttgaagataaagtgatttatgtttggctagattcatgtaaaagtgagttgaata 12306790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 33853436 - 33853489
Alignment:
Q  82 ggctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaa 135  Q
    |||||| ||||||||||| ||| ||||||||||||||||| ||  |||||||||    
T  33853436 ggctaagagtgagttgaagctaaagtgatttatgtttggatacattcatgtaaa 33853489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 45557496 - 45557435
Alignment:
Q  84 ctaaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttga 145  Q
    ||||||||||||||||  || |||||||| |||||||| ||  ||||||||| |||||||||    
T  45557496 ctaaaagtgagttgaaggtaaagtgatttgtgtttggatacattcatgtaaaagtgagttga 45557435  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 40561714 - 40561774
Alignment:
Q  86 aaaagtgagttgaatctatagtgatttatgtttggaaacgatcatgtaaatgtgagttgaa 146  Q
    |||| |||||||||  || ||||||||||||||||| ||  ||||||||| ||||||||||    
T  40561714 aaaattgagttgaaagtaaagtgatttatgtttggatacattcatgtaaaagtgagttgaa 40561774  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 15284 - 15320
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  15284 taaaagtgagttgaatataaagtgatttatgtttgga 15320  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 19649268 - 19649232
Alignment:
Q  85 taaaagtgagttgaatctatagtgatttatgtttgga 121  Q
    |||||||||||||||| || |||||||||||||||||    
T  19649268 taaaagtgagttgaatgtaaagtgatttatgtttgga 19649232  T

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