View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13486_low_11 (Length: 236)
Name: NF13486_low_11
Description: NF13486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13486_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 46846036 - 46846260
Alignment:
| Q |
1 |
caattcaattgaatctttgaagatggccaagagaaatgttgctgctaattctcctcttgagagaactagcttgtcttatctggaccagaggttggccatg |
100 |
Q |
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| T |
46846036 |
caattcaattgaatctttgaagatggccaagagaaatgttgctgctaattctcctcttgagagaaccagcttggcttatctggaccagaggttggccatg |
46846135 |
T |
|
| Q |
101 |
gccaagcgctgttctcatggtaatgcatactttactaacaaatcaatgtataatgtaatctttggtttcctttgttattgtatttatagttttttccatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46846136 |
gccaagcgctgttctcatggtaatgcatactttactaacaaatcaatgtataatgtaatctttggtttcctttgttattgtatttatagttttttccatt |
46846235 |
T |
|
| Q |
201 |
tcttgtgtaaacagagggagtgatg |
225 |
Q |
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||||||| |||||||||| |||||| |
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| T |
46846236 |
tcttgtgcaaacagagggtgtgatg |
46846260 |
T |
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