View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1348_high_65 (Length: 272)
Name: NF1348_high_65
Description: NF1348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1348_high_65 |
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Alignment Details
Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 32069778 - 32069653
Alignment:
| Q |
117 |
caacaacaacagaaatactcaatctctgtcgtgnnnnnnn-gccaaaataatatgagaaagtggaaattcagtctctttctatggcttgcatcgttttgt |
215 |
Q |
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||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32069778 |
caacaacaacaaaaatactcaatctctgtcgtgttttttttgccaaaataatatgagaaagtggaaattcagtctctttctatggcttgcatcgttttgt |
32069679 |
T |
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| Q |
216 |
tttttgttacagtgttttggtctgtg |
241 |
Q |
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||||||| ||||||||||||| |||| |
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| T |
32069678 |
tttttgtcacagtgttttggtttgtg |
32069653 |
T |
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