View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1348_high_89 (Length: 201)
Name: NF1348_high_89
Description: NF1348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1348_high_89 |
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Alignment Details
Target: chr2 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2665118 - 2664994
Alignment:
| Q |
1 |
tcactggtaaccaaacactaatttcaccttcacaaaattttgaacttggtttctttacacctaaaaattccacttacacttatcttggaatatggtataa |
100 |
Q |
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| T |
2665118 |
tcactggtaaccaaacactaatttcaccttcacaaaattttgaacttggtttctttacacctaaaaattccacttacacttatcttggaatatggtataa |
2665019 |
T |
|
| Q |
101 |
gcaaattcacataaagaatattgtt |
125 |
Q |
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||||||||||||||||||||||||| |
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| T |
2665018 |
gcaaattcacataaagaatattgtt |
2664994 |
T |
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