View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1348_low_35 (Length: 430)

Name: NF1348_low_35
Description: NF1348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1348_low_35
NF1348_low_35
[»] chr4 (40 HSPs)
chr4 (112-326)||(6083004-6083220)
chr4 (326-430)||(11798141-11798246)
chr4 (326-419)||(13635698-13635791)
chr4 (326-419)||(49492485-49492578)
chr4 (326-429)||(11785974-11786078)
chr4 (326-429)||(51921227-51921331)
chr4 (324-419)||(1621873-1621968)
chr4 (326-430)||(36011843-36011948)
chr4 (325-429)||(49426019-49426124)
chr4 (326-415)||(55765481-55765570)
chr4 (326-429)||(15051098-15051202)
chr4 (326-427)||(30597699-30597801)
chr4 (326-429)||(46672439-46672543)
chr4 (326-429)||(53441320-53441424)
chr4 (326-414)||(27865715-27865803)
chr4 (326-419)||(35291521-35291614)
chr4 (326-402)||(10472497-10472573)
chr4 (326-405)||(26578176-26578255)
chr4 (323-394)||(25574126-25574197)
chr4 (328-405)||(38244946-38245023)
chr4 (30-90)||(6082747-6082807)
chr4 (329-392)||(1729615-1729678)
chr4 (329-387)||(30357810-30357868)
chr4 (330-400)||(38010145-38010215)
chr4 (330-394)||(16298925-16298989)
chr4 (328-388)||(24686574-24686634)
chr4 (329-383)||(20861583-20861637)
chr4 (326-394)||(50643743-50643810)
chr4 (326-392)||(26447412-26447477)
chr4 (326-392)||(27764240-27764305)
chr4 (330-392)||(36621701-36621762)
chr4 (326-392)||(45255975-45256040)
chr4 (329-394)||(22181243-22181307)
chr4 (333-372)||(805109-805148)
chr4 (353-392)||(4168384-4168423)
chr4 (328-394)||(29826604-29826669)
chr4 (356-392)||(637883-637919)
chr4 (326-392)||(50563729-50563794)
chr4 (345-394)||(6386539-6386590)
chr4 (356-392)||(38485674-38485710)
[»] chr6 (22 HSPs)
chr6 (324-430)||(31216660-31216767)
chr6 (326-429)||(1449542-1449646)
chr6 (330-429)||(6900807-6900907)
chr6 (326-429)||(7089082-7089186)
chr6 (326-419)||(1536869-1536962)
chr6 (325-429)||(15493173-15493278)
chr6 (327-407)||(34870071-34870151)
chr6 (329-387)||(30908655-30908713)
chr6 (326-392)||(35119239-35119300)
chr6 (326-389)||(33346374-33346436)
chr6 (328-392)||(18611190-18611254)
chr6 (331-383)||(27079939-27079991)
chr6 (329-384)||(7764444-7764499)
chr6 (326-375)||(32556344-32556393)
chr6 (329-385)||(12394387-12394442)
chr6 (357-392)||(24737691-24737726)
chr6 (353-392)||(29157252-29157291)
chr6 (325-392)||(34399640-34399706)
chr6 (340-394)||(4338618-4338672)
chr6 (326-392)||(15034975-15035040)
chr6 (340-394)||(16968021-16968075)
chr6 (324-392)||(22042300-22042367)
[»] chr1 (39 HSPs)
chr1 (319-429)||(50351796-50351907)
chr1 (326-429)||(49936899-49937003)
chr1 (325-429)||(24635925-24636030)
chr1 (325-430)||(48762292-48762398)
chr1 (326-429)||(20434684-20434788)
chr1 (326-429)||(25888990-25889094)
chr1 (326-429)||(43452542-43452646)
chr1 (325-429)||(18618834-18618939)
chr1 (326-429)||(19897722-19897826)
chr1 (326-429)||(6314115-6314220)
chr1 (326-429)||(16975954-16976059)
chr1 (325-403)||(11421593-11421671)
chr1 (326-419)||(28375464-28375557)
chr1 (326-405)||(4097895-4097974)
chr1 (326-405)||(34369660-34369739)
chr1 (329-405)||(23175509-23175585)
chr1 (330-394)||(33097409-33097473)
chr1 (329-387)||(21256777-21256835)
chr1 (326-392)||(37639341-37639407)
chr1 (330-391)||(51801734-51801795)
chr1 (330-394)||(31529663-31529727)
chr1 (330-394)||(44260522-44260586)
chr1 (330-394)||(44688608-44688672)
chr1 (325-392)||(18056783-18056849)
chr1 (326-392)||(35198181-35198247)
chr1 (333-372)||(41033946-41033985)
chr1 (329-387)||(31083365-31083423)
chr1 (323-376)||(13590464-13590517)
chr1 (325-389)||(22348038-22348101)
chr1 (326-394)||(28323330-28323398)
chr1 (324-383)||(13673889-13673948)
chr1 (333-372)||(37228364-37228403)
chr1 (329-387)||(20507286-20507344)
chr1 (325-387)||(41033261-41033322)
chr1 (326-383)||(20372205-20372262)
chr1 (353-389)||(16115877-16115913)
chr1 (329-383)||(5077457-5077511)
chr1 (328-394)||(51420347-51420412)
chr1 (326-394)||(23921896-23921963)
[»] scaffold0045 (1 HSPs)
scaffold0045 (325-429)||(33683-33788)
[»] chr7 (28 HSPs)
chr7 (326-429)||(16933206-16933310)
chr7 (326-429)||(16938589-16938693)
chr7 (326-429)||(30884184-30884288)
chr7 (326-429)||(46358520-46358624)
chr7 (326-415)||(20000651-20000740)
chr7 (326-419)||(31660069-31660162)
chr7 (325-429)||(47340145-47340251)
chr7 (326-419)||(763697-763790)
chr7 (324-419)||(41911085-41911177)
chr7 (341-429)||(35736963-35737052)
chr7 (326-392)||(5757386-5757452)
chr7 (329-387)||(24359874-24359932)
chr7 (325-394)||(44141249-44141318)
chr7 (329-394)||(11732645-11732710)
chr7 (325-394)||(39007647-39007716)
chr7 (330-394)||(34875493-34875557)
chr7 (326-394)||(15974934-15975001)
chr7 (326-392)||(30428873-30428938)
chr7 (326-392)||(46024027-46024092)
chr7 (326-383)||(6797394-6797451)
chr7 (326-394)||(25778837-25778904)
chr7 (325-392)||(27335629-27335695)
chr7 (328-389)||(46346719-46346780)
chr7 (326-376)||(48305237-48305285)
chr7 (326-389)||(48690895-48690957)
chr7 (326-392)||(10555949-10556014)
chr7 (326-376)||(45402886-45402936)
chr7 (325-392)||(46573500-46573564)
[»] chr3 (39 HSPs)
chr3 (326-429)||(9106267-9106371)
chr3 (325-429)||(30947873-30947978)
chr3 (325-426)||(54379162-54379263)
chr3 (325-429)||(2941888-2941993)
chr3 (326-429)||(3475369-3475473)
chr3 (323-430)||(6097645-6097753)
chr3 (326-429)||(26662500-26662604)
chr3 (326-429)||(46237720-46237824)
chr3 (327-429)||(33413975-33414078)
chr3 (325-419)||(19284670-19284764)
chr3 (325-429)||(9595942-9596047)
chr3 (325-429)||(47335031-47335136)
chr3 (326-419)||(10986352-10986445)
chr3 (330-429)||(26960630-26960730)
chr3 (329-387)||(41192355-41192413)
chr3 (329-387)||(51846785-51846843)
chr3 (325-394)||(47728387-47728456)
chr3 (326-395)||(51681999-51682068)
chr3 (326-394)||(19385313-19385380)
chr3 (326-394)||(51362436-51362503)
chr3 (329-387)||(34563352-34563410)
chr3 (330-394)||(53594972-53595036)
chr3 (325-392)||(7045300-7045366)
chr3 (326-385)||(23755285-23755344)
chr3 (328-383)||(32232993-32233048)
chr3 (326-392)||(28299952-28300018)
chr3 (330-394)||(37319458-37319522)
chr3 (328-392)||(50754008-50754071)
chr3 (326-389)||(23699327-23699390)
chr3 (326-389)||(23717782-23717845)
chr3 (326-389)||(23736238-23736301)
chr3 (353-392)||(52987650-52987689)
chr3 (326-392)||(8718101-8718166)
chr3 (326-392)||(9069988-9070053)
chr3 (326-372)||(9180111-9180157)
chr3 (330-389)||(16277417-16277475)
chr3 (326-392)||(39099189-39099262)
chr3 (330-394)||(39195106-39195170)
chr3 (331-383)||(41568836-41568888)
[»] chr8 (36 HSPs)
chr8 (325-429)||(19784270-19784375)
chr8 (326-429)||(41099182-41099286)
chr8 (325-430)||(15227029-15227135)
chr8 (326-419)||(30413914-30414007)
chr8 (326-429)||(10237354-10237458)
chr8 (326-429)||(34633283-34633387)
chr8 (326-429)||(43690640-43690744)
chr8 (326-429)||(1149985-1150089)
chr8 (326-429)||(41451105-41451209)
chr8 (325-429)||(7857679-7857784)
chr8 (329-387)||(9852273-9852331)
chr8 (329-387)||(34648133-34648191)
chr8 (326-389)||(15260854-15260917)
chr8 (330-389)||(40247288-40247347)
chr8 (325-383)||(2522866-2522924)
chr8 (333-387)||(23396484-23396538)
chr8 (326-392)||(32987445-32987510)
chr8 (329-387)||(35302591-35302649)
chr8 (326-394)||(42433701-42433768)
chr8 (326-392)||(12355422-12355488)
chr8 (326-392)||(39021975-39022040)
chr8 (329-375)||(40023279-40023325)
chr8 (352-392)||(8550529-8550569)
chr8 (330-394)||(13526669-13526733)
chr8 (330-394)||(13616204-13616268)
chr8 (326-392)||(1208709-1208774)
chr8 (326-388)||(7058114-7058175)
chr8 (326-372)||(18022053-18022099)
chr8 (326-388)||(40012186-40012247)
chr8 (355-392)||(4836701-4836738)
chr8 (355-392)||(4842146-4842183)
chr8 (353-392)||(7614094-7614133)
chr8 (330-376)||(10443586-10443632)
chr8 (326-392)||(15181790-15181856)
chr8 (330-394)||(28698578-28698643)
chr8 (350-386)||(30651973-30652009)
[»] chr5 (21 HSPs)
chr5 (325-429)||(15416663-15416768)
chr5 (326-429)||(3883997-3884101)
chr5 (326-430)||(26637798-26637903)
chr5 (326-429)||(13552983-13553087)
chr5 (330-429)||(14940318-14940418)
chr5 (325-429)||(37456679-37456784)
chr5 (326-429)||(14394468-14394572)
chr5 (326-407)||(30783435-30783516)
chr5 (326-394)||(16552637-16552705)
chr5 (326-394)||(33868155-33868223)
chr5 (328-392)||(16668794-16668858)
chr5 (331-391)||(4674965-4675025)
chr5 (328-392)||(13362772-13362835)
chr5 (328-392)||(25017217-25017280)
chr5 (326-392)||(28070153-28070218)
chr5 (326-392)||(34329127-34329192)
chr5 (328-392)||(18465556-18465620)
chr5 (326-392)||(23335707-23335772)
chr5 (353-392)||(42512225-42512264)
chr5 (326-383)||(39056461-39056518)
chr5 (331-383)||(7183142-7183194)
[»] chr2 (29 HSPs)
chr2 (325-429)||(15016528-15016633)
chr2 (328-430)||(34464713-34464816)
chr2 (325-419)||(39355034-39355128)
chr2 (325-429)||(8149830-8149935)
chr2 (325-429)||(8154454-8154559)
chr2 (326-419)||(9143585-9143678)
chr2 (326-429)||(7487216-7487320)
chr2 (326-419)||(1292152-1292245)
chr2 (326-387)||(18762867-18762928)
chr2 (325-405)||(2263572-2263652)
chr2 (328-394)||(5098718-5098784)
chr2 (325-392)||(18298111-18298177)
chr2 (326-394)||(25995286-25995354)
chr2 (326-394)||(36636935-36637003)
chr2 (342-394)||(39548058-39548110)
chr2 (325-392)||(25192891-25192957)
chr2 (326-392)||(20709774-20709839)
chr2 (329-387)||(41346045-41346103)
chr2 (330-394)||(13081858-13081922)
chr2 (333-372)||(21155441-21155480)
chr2 (333-372)||(27974291-27974330)
chr2 (333-372)||(28060820-28060859)
chr2 (326-372)||(3925578-3925624)
chr2 (326-392)||(4281788-4281854)
chr2 (327-392)||(14551319-14551382)
chr2 (331-383)||(24024633-24024685)
chr2 (331-386)||(40853685-40853740)
chr2 (340-394)||(16142073-16142127)
chr2 (324-392)||(44352679-44352746)
[»] scaffold0581 (1 HSPs)
scaffold0581 (325-429)||(8383-8488)
[»] scaffold0571 (1 HSPs)
scaffold0571 (325-407)||(661-743)
[»] scaffold0074 (1 HSPs)
scaffold0074 (325-419)||(24273-24367)
[»] scaffold0238 (1 HSPs)
scaffold0238 (326-394)||(25230-25297)
[»] scaffold0460 (1 HSPs)
scaffold0460 (323-383)||(1601-1661)
[»] scaffold0097 (1 HSPs)
scaffold0097 (326-392)||(13613-13678)
[»] scaffold0006 (2 HSPs)
scaffold0006 (325-383)||(209325-209383)
scaffold0006 (324-383)||(171503-171562)
[»] scaffold0544 (1 HSPs)
scaffold0544 (327-392)||(10675-10739)
[»] scaffold0002 (1 HSPs)
scaffold0002 (325-376)||(450201-450252)
[»] scaffold0558 (2 HSPs)
scaffold0558 (327-388)||(2448-2508)
scaffold0558 (327-388)||(5860-5920)
[»] scaffold0069 (1 HSPs)
scaffold0069 (326-383)||(51359-51416)
[»] scaffold0189 (1 HSPs)
scaffold0189 (326-394)||(11188-11255)
[»] scaffold0012 (1 HSPs)
scaffold0012 (323-383)||(119199-119259)
[»] scaffold0050 (1 HSPs)
scaffold0050 (326-392)||(18980-19045)
[»] scaffold0019 (1 HSPs)
scaffold0019 (326-387)||(164058-164118)
[»] scaffold0337 (1 HSPs)
scaffold0337 (356-392)||(7046-7082)


Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 112 - 326
Target Start/End: Original strand, 6083004 - 6083220
Alignment:
Q  112 tgaatcgaaaaatttgacaaaagatttatggattttagttatgtttgctaaaatgaagtttagacaaaagtgtaaaccgggatgttttggaaaagttttc 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6083004 tgaatcgaaaaatttgacaaaagatttatggattttagttatgtttgctaaaatgaagtttagacaaaagcgtaaaccgggatgttttggaaaagttttc 6083103  T
Q  212 cataatgtattgaccttggggtaaatatattgaattttaggaaggtgaataaact---ttttattaacattctagaaaactcagtttcacattttctggt 308  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  6083104 cataatgtatt-accttggggtaaaaatattgaattttaggaaggtgaataaactcagttttattaacattctagaaaactcagtttcacattttctggt 6083202  T
Q  309 ttacaattttagctaccg 326  Q
    ||||||||||||||||||    
T  6083203 ttacaattttagctaccg 6083220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 326 - 430
Target Start/End: Original strand, 11798141 - 11798246
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11798141 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11798240  T
Q  425 acttta 430  Q
    ||||||    
T  11798241 acttta 11798246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 13635791 - 13635698
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13635791 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttt 13635698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 49492578 - 49492485
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49492578 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttt 49492485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 11785974 - 11786078
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11785974 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11786073  T
Q  425 acttt 429  Q
    |||||    
T  11786074 acttt 11786078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 51921331 - 51921227
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  51921331 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 51921232  T
Q  425 acttt 429  Q
    |||||    
T  51921231 acttt 51921227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 1621873 - 1621968
Alignment:
Q  324 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1621873 ccggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttt 1621968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 430
Target Start/End: Original strand, 36011843 - 36011948
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaat-ggtttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  36011843 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 36011942  T
Q  425 acttta 430  Q
    ||||||    
T  36011943 acttta 36011948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 49426124 - 49426019
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  49426124 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggct 49426025  T
Q  424 cacttt 429  Q
    ||||||    
T  49426024 cacttt 49426019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 55765481 - 55765570
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55765481 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatg 55765570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 15051202 - 15051098
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  15051202 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 15051103  T
Q  425 acttt 429  Q
    |||||    
T  15051102 acttt 15051098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 326 - 427
Target Start/End: Original strand, 30597699 - 30597801
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  30597699 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 30597798  T
Q  425 act 427  Q
    |||    
T  30597799 act 30597801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 46672439 - 46672543
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaat-ggtttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||    
T  46672439 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttattttattttgaacaaaaatagttttggctc 46672538  T
Q  425 acttt 429  Q
    |||||    
T  46672539 acttt 46672543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 53441320 - 53441424
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  53441320 ggcaaaagttatggtgcataagttatttccttatgcatcgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggctc 53441419  T
Q  425 acttt 429  Q
    |||||    
T  53441420 acttt 53441424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 326 - 414
Target Start/End: Complemental strand, 27865803 - 27865715
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaat 414  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27865803 ggcaaaagttatagtgcataagccatttccatatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaat 27865715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 35291614 - 35291521
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||    
T  35291614 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccataagatttattttattttgaacaaaaatagttt 35291521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 326 - 402
Target Start/End: Original strand, 10472497 - 10472573
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcatt 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10472497 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttcacaaccatcagatttctttcatt 10472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 26578255 - 26578176
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttg 405  Q
    ||||||||| |||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26578255 ggcaaaagtcatggtgcataagccatttctttatgcatcgtgcataaacacttcacaaccatcagatttctttcattttg 26578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 394
Target Start/End: Complemental strand, 25574197 - 25574126
Alignment:
Q  323 accggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  25574197 accggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 25574126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 38244946 - 38245023
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttg 405  Q
    |||||||||||||||||||| ||||||||| ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  38244946 caaaagttatggtgcataagccatttccttctgcacagttcataaacacttcacaaccatcagatttcttttattttg 38245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 6082747 - 6082807
Alignment:
Q  30 cttttgtcatttaacttcaccccacaagatattctcggtaaataaaagttttcctgaattg 90  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  6082747 cttttgtcatttaacttcaccccacaagatattcttggtaaataaaagtttttctgaattg 6082807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 1729678 - 1729615
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatcagat 1729615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 30357810 - 30357868
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  30357810 aaaagttatggttcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 330 - 400
Target Start/End: Original strand, 38010145 - 38010215
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttca 400  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||| ||||    
T  38010145 aaagttatggtgcataagtcatttccttatgcaccatgcataaacacttcacaaccatttgatttccttca 38010215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 16298925 - 16298989
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  16298925 aaagttattatgcataagtcatttccttatgcaccctgcataatcacttcacaaccatcagattt 16298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 24686574 - 24686634
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 388  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24686574 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatc 24686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 383
Target Start/End: Original strand, 20861583 - 20861637
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  20861583 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaa 20861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 50643743 - 50643810
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| ||| |||||||||||||    
T  50643743 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcataaccatcagattt 50643810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 26447477 - 26447412
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||| ||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  26447477 ggcaaaagtaatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 26447412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 27764240 - 27764305
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| || ||||||||||||    
T  27764240 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcgcaaccatcagat 27764305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 36621762 - 36621701
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  36621762 aaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 36621701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 45255975 - 45256040
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||| |||||||    
T  45255975 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatcagat 45256040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 394
Target Start/End: Complemental strand, 22181307 - 22181243
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||||||||||||||||||  | | |||||||||||||||||||| || |||||||||||||||||    
T  22181307 aaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaaaacttcacaaccatcagattt 22181243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 372
Target Start/End: Original strand, 805109 - 805148
Alignment:
Q  333 gttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  805109 gttatggtgcataagccatttccttatgcaccgtgcataa 805148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 4168384 - 4168423
Alignment:
Q  353 tccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatcagat 4168423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 29826669 - 29826604
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||| ||| |||||||||||||||||    
T  29826669 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 29826604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 637883 - 637919
Alignment:
Q  356 ttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||| |||||||||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatcagat 637919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 50563794 - 50563729
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||  ||||||||  ||||| | ||||||| ||||||||||| |||||||||||||||    
T  50563794 ggcaaaagttattatgcataagatatttcat-atgcaccctgcataaacacttcacaaccatcagat 50563729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 6386590 - 6386539
Alignment:
Q  345 aagtcatttccttatgc--accgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||| |||||||  ||| ||||||||||| |||||||||||||||||    
T  6386590 aagtcattttcttatgcgcaccctgcataaacacttcacaaccatcagattt 6386539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 38485710 - 38485674
Alignment:
Q  356 ttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||| | |||||||||||||||    
T  38485710 ttatgcaccgtgcataaacgcttcacaaccatcagat 38485674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 430
Target Start/End: Original strand, 31216660 - 31216767
Alignment:
Q  324 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggc 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31216660 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggc 31216759  T
Q  423 tcacttta 430  Q
    ||||||||    
T  31216760 tcacttta 31216767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 1449542 - 1449646
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  1449542 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 1449641  T
Q  425 acttt 429  Q
    |||||    
T  1449642 acttt 1449646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 330 - 429
Target Start/End: Original strand, 6900807 - 6900907
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctcactt 428  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6900807 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 6900906  T
Q  429 t 429  Q
    |    
T  6900907 t 6900907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 7089082 - 7089186
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  7089082 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttggctc 7089181  T
Q  425 acttt 429  Q
    |||||    
T  7089182 acttt 7089186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 1536962 - 1536869
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  1536962 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttt 1536869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 15493173 - 15493278
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| |||||||    
T  15493173 cggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcataaccattagatttcttttattttgaacaaaaatggttttggct 15493272  T
Q  424 cacttt 429  Q
    ||||||    
T  15493273 cacttt 15493278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 34870151 - 34870071
Alignment:
Q  327 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 407  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  34870151 gcaaaagttatggtgcataagccatttccttatgcaccatgtataaacacatcacaaccatcagatttctttcattttgaa 34870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 30908655 - 30908713
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30908655 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 35119239 - 35119300
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||||     |||||||||||||||||||||| |||||||||||||||    
T  35119239 ggcaaaagttatggtgcataagtc-----cttatgcaccgtgcataaacacttcacaaccatcagat 35119300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 33346436 - 33346374
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 33346374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 18611190 - 18611254
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||  |||||||| |||||| ||||||||  ||||||||||| |||||||||||||||    
T  18611190 caaaagttattatgcataagacatttctttatgcactctgcataaacacttcacaaccatcagat 18611254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 27079991 - 27079939
Alignment:
Q  331 aagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||  |||||||||||||| |||||||||||||||||||||| ||||||    
T  27079991 aagttattatgcataagtcattttcttatgcaccgtgcataaacacttcacaa 27079939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 384
Target Start/End: Original strand, 7764444 - 7764499
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaac 384  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||    
T  7764444 aaaagttatggtgcataagccattttcttatgcgccgtgtataaacacttcacaac 7764499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 32556344 - 32556393
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaaca 375  Q
    ||||||||||||  |||||||||||||| |||||||||| ||||||||||    
T  32556344 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaaca 32556393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 12394442 - 12394387
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaacc 385  Q
    |||||||||||||||||||  | | ||||||||||||||||||||||| ||||||||    
T  12394442 aaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 392
Target Start/End: Complemental strand, 24737726 - 24737691
Alignment:
Q  357 tatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||| |||||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagat 24737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 29157252 - 29157291
Alignment:
Q  353 tccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  29157252 tccttatgcaccgtgcataaacactttacaaccatcagat 29157291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 392
Target Start/End: Original strand, 34399640 - 34399706
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||  | | |||||||||||||  |||||||| |||||| ||||||||    
T  34399640 cggcaaaagttatggtgcataaggaaat-ccttatgcaccgtatataaacacttcacaatcatcagat 34399706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 4338672 - 4338618
Alignment:
Q  340 tgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||||||| ||||| |||||||||| ||||||||||| ||| || ||||||||||    
T  4338672 tgcataagccattttcttatgcaccctgcataaacacttcaaaatcatcagattt 4338618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 15035040 - 15034975
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  |  |||||||||||||||||||||    |||||||||||||||    
T  15035040 ggcaaaagttatggtgcataag-gaaatccttatgcaccgtgcataaatcattcacaaccatcagat 15034975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 16968075 - 16968021
Alignment:
Q  340 tgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||||||| ||||| |||||||||| ||||||||||| ||| |||||||| ||||    
T  16968075 tgcataagccattttcttatgcaccctgcataaacacttcataaccatcaaattt 16968021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 22042367 - 22042300
Alignment:
Q  324 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||| || |  |||||||||| |||||||    ||||||||||||||||    
T  22042367 ccggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagttaatcacaaccatcagat 22042300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 6e-47; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 50351796 - 50351907
Alignment:
Q  319 agctaccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggtt 418  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50351796 agctagcggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctatcattttgaacaaaaatggtt 50351895  T
Q  419 -tggctcacttt 429  Q
     |||||||||||    
T  50351896 atggctcacttt 50351907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 49937003 - 49936899
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggctc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  49937003 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgattttggctc 49936904  T
Q  425 acttt 429  Q
    |||||    
T  49936903 acttt 49936899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 24635925 - 24636030
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  24635925 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 24636024  T
Q  424 cacttt 429  Q
    ||||||    
T  24636025 cacttt 24636030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 325 - 430
Target Start/End: Complemental strand, 48762398 - 48762292
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  48762398 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccattagatttcttttattttgaacaaaaatggttttggct 48762299  T
Q  424 cacttta 430  Q
    |||||||    
T  48762298 cacttta 48762292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 20434788 - 20434684
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggctc 424  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  20434788 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccattagatttctttcattttgaacaaaaatgattttggctc 20434689  T
Q  425 acttt 429  Q
    |||||    
T  20434688 acttt 20434684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 25889094 - 25888990
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  25889094 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 25888995  T
Q  425 acttt 429  Q
    |||||    
T  25888994 acttt 25888990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 43452542 - 43452646
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  43452542 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaactatcagatttcttttattttgaacaaaaatggttttggctc 43452641  T
Q  425 acttt 429  Q
    |||||    
T  43452642 acttt 43452646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 18618834 - 18618939
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaa-tggtttggct 423  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  18618834 cggcaaaagttatggtgcataaattatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaattgttttggct 18618933  T
Q  424 cacttt 429  Q
    ||||||    
T  18618934 cacttt 18618939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 19897826 - 19897722
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggctc 424  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  19897826 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 19897727  T
Q  425 acttt 429  Q
    |||||    
T  19897726 acttt 19897722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 6314115 - 6314220
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaac-aaaaatgg-tttggct 423  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||||    
T  6314115 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacagccatcaaatttctttcattttgaacaaaaaatggttttggct 6314214  T
Q  424 cacttt 429  Q
    ||||||    
T  6314215 cacttt 6314220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 16975954 - 16976059
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaac-aaaaatgg-tttggct 423  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  16975954 ggcaaaagttatggttcataagttatttccttatgcaccgtgtataaacacatcacaaccatcagatttcttttattttgaacaaaaaatggttttggct 16976053  T
Q  424 cacttt 429  Q
    ||||||    
T  16976054 cacttt 16976059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 403
Target Start/End: Original strand, 11421593 - 11421671
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattt 403  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11421593 cggcaaaagttatggtgcataaatcatttccttatgcaccgtgcataaacacttcacaaccatcagatttctttcattt 11421671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 28375464 - 28375557
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||    
T  28375464 ggcaaaagttatggtgcataagttatttctttatgcaccgtgcataaacacatcacaaccatcagattttttttattttaaacaaaaatagttt 28375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 4097974 - 4097895
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttg 405  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  4097974 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatcaaatttctttcattttg 4097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 326 - 405
Target Start/End: Original strand, 34369660 - 34369739
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttg 405  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34369660 ggcaaaaattatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccatcagatttctttcattttg 34369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 23175585 - 23175509
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttg 405  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  23175585 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaaccatcaaatttctttcattttg 23175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 33097409 - 33097473
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  33097409 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 33097473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 21256835 - 21256777
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  21256835 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccat 21256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 37639341 - 37639407
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  37639341 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatcagat 37639407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 51801795 - 51801734
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaga 391  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  51801795 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaga 51801734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 31529727 - 31529663
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  31529727 aaagttattatgcataagccatttccttatgcaccatgcataaacacttcacaaccatcagattt 31529663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 44260522 - 44260586
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  44260522 aaagttattatgcgtaagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 44260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 44688672 - 44688608
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  44688672 aaagttatcatgcataagtcatttccttatgcacgctgcataaacacttcacaaccatcagattt 44688608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 392
Target Start/End: Original strand, 18056783 - 18056849
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  18056783 cggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 18056849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 35198247 - 35198181
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||| |||||||||    
T  35198247 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacagccatcagat 35198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 372
Target Start/End: Complemental strand, 41033985 - 41033946
Alignment:
Q  333 gttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41033985 gttatggtgcataagtcatttccttatgcaccgtgcataa 41033946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 31083365 - 31083423
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||||| |||||||||||| ||| | ||||||||| ||||||||||    
T  31083365 aaaagttatggtgcataagccatttccttatgtaccattcataaacacttcacaaccat 31083423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 13590464 - 13590517
Alignment:
Q  323 accggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 376  Q
    |||| ||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  13590464 accgtcaaaagttattatgcataagtcatttccttatgcaccctgcataaacac 13590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 22348038 - 22348101
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    |||||||||||||||||||||||  | | |||||||||||| |||||||||| ||||||||||||    
T  22348038 cggcaaaagttatggtgcataaggaaat-ccttatgcaccgcgcataaacacttcacaaccatca 22348101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 28323398 - 28323330
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||  ||||||||||||||  ||||||||| | |||||||||  ||||||||||||||||    
T  28323398 ggcaaaagttattatgcataagtcatttttttatgcaccctccataaacactacacaaccatcagattt 28323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 13673889 - 13673948
Alignment:
Q  324 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||||| ||||  ||||||||||||||||||||||||| || |||||||| ||||||    
T  13673889 ccggcaaaaattattatgcataagtcatttccttatgcaccctgtataaacacttcacaa 13673948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 372
Target Start/End: Complemental strand, 37228403 - 37228364
Alignment:
Q  333 gttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37228403 gttatggtgcataagccatttccttatgcaccgtgcataa 37228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 20507344 - 20507286
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||| |  ||||||||||    
T  20507344 aaaagttatggtgcataagccatttccttatgcattgtgcataaatatttcacaaccat 20507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 41033261 - 41033322
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||||||||||||||||||  ||||||||||||||| | |||||| | |||||||||||    
T  41033261 cggcaaaagttatggtgcataag-gatttccttatgcaccatacataaagaaatcacaaccat 41033322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 20372205 - 20372262
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||| ||||  |||||||||||||| |||||||||| ||||||||||| ||||||    
T  20372205 ggcaaaaattattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 20372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 16115877 - 16115913
Alignment:
Q  353 tccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16115877 tccttatgcaccgtgcataaacacttcacaaccatca 16115913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 5077511 - 5077457
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||||  |||||||||||||||||||||| || ||||||| ||| ||||||    
T  5077511 aaaagttattatgcataagtcatttccttatgcgccctgcataagcacttcacaa 5077457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 51420347 - 51420412
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||  ||||||||||| ||| ||||||| | ||||||||||  |||||||||||||||||    
T  51420347 caaaagttattatgcataagtcaattctttatgcatcctgcataaaca-ttcacaaccatcagattt 51420412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 23921963 - 23921896
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||||||||||| |||||||||  | | ||||||||| ||||||||| ||| ||| |||||||||||||    
T  23921963 ggcaaaagttattgtgcataaggaaat-ccttatgcatcgtgcataagcacttcataaccatcagattt 23921896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 33683 - 33788
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33683 cggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggct 33782  T
Q  424 cacttt 429  Q
    ||||||    
T  33783 cacttt 33788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 16933310 - 16933206
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  16933310 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 16933211  T
Q  425 acttt 429  Q
    |||||    
T  16933210 acttt 16933206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 16938693 - 16938589
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  16938693 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 16938594  T
Q  425 acttt 429  Q
    |||||    
T  16938593 acttt 16938589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 30884288 - 30884184
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  30884288 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 30884189  T
Q  425 acttt 429  Q
    |||||    
T  30884188 acttt 30884184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 46358520 - 46358624
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  46358520 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 46358619  T
Q  425 acttt 429  Q
    |||||    
T  46358620 acttt 46358624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 415
Target Start/End: Complemental strand, 20000740 - 20000651
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg 415  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20000740 ggcaaaagttatggtgcataagtcatttacttatgcaccgtgcataaacacatcacaaccatcagatttctttcactttgaacaaaaatg 20000651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 31660069 - 31660162
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  31660069 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttt 31660162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 47340145 - 47340251
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaa-cacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggc 422  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  47340145 cggcaaaagttatggtgcataagttattttcttatgcaccgtgcataaaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggc 47340244  T
Q  423 tcacttt 429  Q
    |||||||    
T  47340245 tcacttt 47340251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 763697 - 763790
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  763697 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaaccatcagatttcttttattttgaacataaatggttt 763790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 41911177 - 41911085
Alignment:
Q  324 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  41911177 ccggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat---ttttattttgaacaaaaatggttt 41911085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 341 - 429
Target Start/End: Original strand, 35736963 - 35737052
Alignment:
Q  341 gcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctcacttt 429  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  35736963 gcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctcacttt 35737052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 5757386 - 5757452
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  5757386 ggcaaaagttattatgcataagacatttccttatgcaccgtgcataaacacttcacaaccatcagat 5757452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 24359874 - 24359932
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  24359874 aaaagttatggtgcataagtcatttccttatgcaccgtgcatcaacacttcacaaccat 24359932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 44141318 - 44141249
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  44141318 cggcaaaagttatcatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgattt 44141249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 394
Target Start/End: Complemental strand, 11732710 - 11732645
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||| ||||||    
T  11732710 aaaagttatggtgcataagccattttcttatgcactgtgcataaacacttcacaaccattagattt 11732645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 39007716 - 39007647
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||| |||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  39007716 cggcaaaggttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcatattt 39007647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 34875493 - 34875557
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  34875493 aaagttattatgcataagccatttccttatgcaccctgcataaacacttcacaaccatcagattt 34875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 15975001 - 15974934
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||| ||||    
T  15975001 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcatattt 15974934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 30428873 - 30428938
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||  |||||||||||||||    
T  30428873 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacatttcacaaccatcagat 30428938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 46024027 - 46024092
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||| |||  | | ||||||||||||||||||||||| |||||||||||||||    
T  46024027 ggcaaaagttatggtgcacaagaaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 46024092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 6797451 - 6797394
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||||||||  ||||||||||||||||||||||| | ||||||||||| ||||||    
T  6797451 ggcaaaagttattatgcataagtcatttccttatgcatcctgcataaacacttcacaa 6797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 25778837 - 25778904
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | ||| |||||||| |||||||| ||| |||||||||||||||||    
T  25778837 ggcaaaagttatggtgcataagaaaattc-ttatgcactgtgcataagcacttcacaaccatcagattt 25778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 27335695 - 27335629
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||  |  ||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  27335695 cggcaaaagttattataaataagtcattttcttatgcacc-tgcataaacacttcacaaccatcagat 27335629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 46346780 - 46346719
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||||  |||||||||||||| |||||||| | || |||||||| ||||||||||||    
T  46346780 caaaagttattatgcataagtcattttcttatgcatcctgtataaacacttcacaaccatca 46346719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 376
Target Start/End: Original strand, 48305237 - 48305285
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 376  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||||    
T  48305237 ggcaaaagttatggtgcataagga--ttccttatgcaccgtgcataaacac 48305285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 48690895 - 48690957
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    |||||||||||||||||||||   | | ||||||||||||||||||||||  ||||||||||||    
T  48690895 ggcaaaagttatggtgcataaagaaat-ccttatgcaccgtgcataaacagttcacaaccatca 48690957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 10555949 - 10556014
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  |||| |||||||||| | |||||  | ||||||||||||||||    
T  10555949 ggcaaaagttatggtgcataag-gatttgcttatgcaccatacataaggaaatcacaaccatcagat 10556014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 45402936 - 45402886
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 376  Q
    ||||||||||||  ||||||||| |||||||||||||||  ||||||||||    
T  45402936 ggcaaaagttattatgcataagttatttccttatgcacccagcataaacac 45402886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 46573564 - 46573500
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||| ||||||||    || ||||||||||||  |||||||| |||||||||||||||    
T  46573564 cggcaaaagttatgatgcataagg---tttcttatgcaccgtatataaacacttcacaaccatcagat 46573500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 9106267 - 9106371
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  9106267 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatggttttggctc 9106366  T
Q  425 acttt 429  Q
    |||||    
T  9106367 acttt 9106371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 30947978 - 30947873
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  30947978 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaatcatcaaatttctttcattttgaacaaaaatggttttggct 30947879  T
Q  424 cacttt 429  Q
    ||||||    
T  30947878 cacttt 30947873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 325 - 426
Target Start/End: Original strand, 54379162 - 54379263
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggtttggctc 424  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  54379162 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggtttggctc 54379261  T
Q  425 ac 426  Q
    ||    
T  54379262 ac 54379263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 2941993 - 2941888
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  2941993 cggcaaaagttatggtgcataagttatttccttatgtaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 2941894  T
Q  424 cacttt 429  Q
    ||||||    
T  2941893 cacttt 2941888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 3475473 - 3475369
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  3475473 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 3475374  T
Q  425 acttt 429  Q
    |||||    
T  3475373 acttt 3475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 6097753 - 6097645
Alignment:
Q  323 accggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttgg 421  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| |||||    
T  6097753 accggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcataactatcagatttcttttattttgaacaaaaatggttttgg 6097654  T
Q  422 ctcacttta 430  Q
    |||||||||    
T  6097653 ctcacttta 6097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 26662604 - 26662500
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  26662604 ggcaaaagttattgtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 26662505  T
Q  425 acttt 429  Q
    |||||    
T  26662504 acttt 26662500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 46237824 - 46237720
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  46237824 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 46237725  T
Q  425 acttt 429  Q
    |||||    
T  46237724 acttt 46237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 327 - 429
Target Start/End: Complemental strand, 33414078 - 33413975
Alignment:
Q  327 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||    
T  33414078 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttaaataaaaatggttttggctca 33413979  T
Q  426 cttt 429  Q
    ||||    
T  33413978 cttt 33413975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 325 - 419
Target Start/End: Original strand, 19284670 - 19284764
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  19284670 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttt 19284764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 9596047 - 9595942
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  9596047 cggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggct 9595948  T
Q  424 cacttt 429  Q
    ||||||    
T  9595947 cacttt 9595942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 47335031 - 47335136
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggct 423  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||    
T  47335031 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatgattttggct 47335130  T
Q  424 cacttt 429  Q
    ||||||    
T  47335131 cacttt 47335136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 10986352 - 10986445
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  10986352 ggcaaaagttatgatgtataagttatttccttatgcaccgtgcataaacacatcataaccatcagatttcttttattttaaacaaaaatggttt 10986445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 330 - 429
Target Start/End: Original strand, 26960630 - 26960730
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctcactt 428  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||||||||||||| ||||||||||||    
T  26960630 aaagttatggtgtataagttatttccttatgcaccgtgcataaacacattacaatcatcaggtttcttttattttgaacaaaaatggttttggctcactt 26960729  T
Q  429 t 429  Q
    |    
T  26960730 t 26960730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 41192413 - 41192355
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  41192413 aaaagttatggtgcataagtcatttccttatgcaccgtacataaacacttcacaaccat 41192355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 51846843 - 51846785
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  51846843 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacttcacaaccat 51846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 47728387 - 47728456
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||||||||||||  |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  47728387 cggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaaccatcagattt 47728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 51682068 - 51681999
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttc 395  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  51682068 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcgcaaccatcagatttc 51681999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 19385380 - 19385313
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||||    
T  19385380 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 19385313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 51362503 - 51362436
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||||    
T  51362503 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 51362436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 34563410 - 34563352
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  34563410 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacatttcacaaccat 34563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 53594972 - 53595036
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  |||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||    
T  53594972 aaagttattatgcataagccattttcttatgcaccctgcataaacacttcacaaccatcagattt 53595036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 7045366 - 7045300
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||  | ||| |||||||||||| |||||||| |||||||||||||||    
T  7045366 cggcaaaagttatggtgcataaggaaattc-ttatgcaccgtgtataaacacttcacaaccatcagat 7045300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 23755285 - 23755344
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaacc 385  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||    
T  23755285 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaacc 23755344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 383
Target Start/End: Original strand, 32232993 - 32233048
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||    
T  32232993 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 32233048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 28300018 - 28299952
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||| ||||  ||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||    
T  28300018 ggcaaaaattattatgcataagtcatttccttatgtaccatgcataaacacttcacaactatcagat 28299952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 37319522 - 37319458
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||| |||||  ||||||||||    
T  37319522 aaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacattcatcagattt 37319458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 50754008 - 50754071
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  50754008 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 50754071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 23699327 - 23699390
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||||||  |||||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23699327 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23699390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 23717782 - 23717845
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||||||  |||||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23717782 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23717845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 23736238 - 23736301
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||||||  |||||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23736238 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23736301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 52987689 - 52987650
Alignment:
Q  353 tccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  52987689 tccttatgcaccgtgcataaacacttcacaaccatcagat 52987650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 8718101 - 8718166
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||| |||||| || |||||||||||||||    
T  8718101 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtacataaatacttcacaaccatcagat 8718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 9069988 - 9070053
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||| |||||| || |||||||||||||||    
T  9069988 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtacataaatacttcacaaccatcagat 9070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 9180157 - 9180111
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||    
T  9180157 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 9180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 16277475 - 16277417
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||||||||||||  | | | ||||||||||||||||||||| ||||||||||||    
T  16277475 aaagttatggtgcataaggaaat-ctttatgcaccgtgcataaacacttcacaaccatca 16277417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 39099189 - 39099262
Alignment:
Q  326 ggcaaaagttatggtgcataag-------tcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||| |  |||||||||||||||    
T  39099189 ggcaaaagttatggtgcataagaaaattcttatttccttatgcaccgtgcataaatatttcacaaccatcagat 39099262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 39195170 - 39195106
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  ||||||||||||||||| ||||||| ||||| ||||| | | |||||||| ||||    
T  39195170 aaagttattatgcataagtcatttcctcatgcaccctgcatgaacactttataaccatcaaattt 39195106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 41568836 - 41568888
Alignment:
Q  331 aagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||  ||||||||||| ||||||||||||| |||||||| || ||||||    
T  41568836 aagttattatgcataagtcaattccttatgcaccatgcataaatacttcacaa 41568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 19784270 - 19784375
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  19784270 cggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 19784369  T
Q  424 cacttt 429  Q
    ||||||    
T  19784370 cacttt 19784375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 41099182 - 41099286
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41099182 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 41099281  T
Q  425 acttt 429  Q
    |||||    
T  41099282 acttt 41099286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 15227029 - 15227135
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||    
T  15227029 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacattacaaccatcagatttcttttattttgaacaaaaatggttttggct 15227128  T
Q  424 cacttta 430  Q
    |||||||    
T  15227129 cacttta 15227135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 30413914 - 30414007
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30413914 ggcaaaagttatgctgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttt 30414007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 10237354 - 10237458
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  10237354 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 10237453  T
Q  425 acttt 429  Q
    |||||    
T  10237454 acttt 10237458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 34633387 - 34633283
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  34633387 ggcaaaagttatggtacataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 34633288  T
Q  425 acttt 429  Q
    |||||    
T  34633287 acttt 34633283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 43690640 - 43690744
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  43690640 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 43690739  T
Q  425 acttt 429  Q
    |||||    
T  43690740 acttt 43690744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 1150089 - 1149985
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  1150089 ggcaaaagttatggtgcataagttattcccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctc 1149990  T
Q  425 acttt 429  Q
    |||||    
T  1149989 acttt 1149985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 41451105 - 41451209
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  41451105 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaatcatcagatttcttttattttgaacaaaaatggttttggctc 41451204  T
Q  425 acttt 429  Q
    |||||    
T  41451205 acttt 41451209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 7857679 - 7857784
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||    
T  7857679 cggcaaaagttatggtgcataagccattttcttatgcgccgtgcataaacacatcacaatcatcagatttttttaattttgaacaaaaatggttttggct 7857778  T
Q  424 cacttt 429  Q
    ||||||    
T  7857779 cacttt 7857784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 9852273 - 9852331
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9852273 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 9852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 34648191 - 34648133
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34648191 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 34648133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 15260917 - 15260854
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatca 15260854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 40247347 - 40247288
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 389  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40247347 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatca 40247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 2522866 - 2522924
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||    
T  2522866 cggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 2522924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 23396484 - 23396538
Alignment:
Q  333 gttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  23396484 gttatggtgcataagccatttccttatgcaccgtgcataaacactttacaaccat 23396538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 32987510 - 32987445
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 32987445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 35302649 - 35302591
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||| ||||||||||    
T  35302649 aaaagttatggtgcataggacattttcttatgcaccgtgcataaacacttcacaaccat 35302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 42433701 - 42433768
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||| ||| |||||||||||||||||    
T  42433701 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 42433768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 12355422 - 12355488
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||   ||||||||||||| |||||||||| ||||||||||| |||||||||| ||||    
T  12355422 ggcaaaagttattacgcataagtcattttcttatgcaccctgcataaacacttcacaaccattagat 12355488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 39021975 - 39022040
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||| ||||||||    
T  39021975 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaatcatcagat 39022040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 40023325 - 40023279
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaaca 375  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  40023325 aaaagttatggtgcataagccatttccttatacaccgtgcataaaca 40023279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 8550529 - 8550569
Alignment:
Q  352 ttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8550529 ttccttatgcaccgtgcataaacacttcacaaccatcagat 8550569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 13526733 - 13526669
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  |||||||| |||||||||||| ||  ||||||||||| |||||||||||||||||    
T  13526733 aaagttattatgcataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13526669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 13616268 - 13616204
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  |||||||| |||||||||||| ||  ||||||||||| |||||||||||||||||    
T  13616268 aaagttattatgcataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13616204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 1208709 - 1208774
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| | |||||||| ||||    
T  1208709 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacactttacaaccataagat 1208774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 388
Target Start/End: Original strand, 7058114 - 7058175
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 388  Q
    ||||||||||||||||||||||  | | | ||||||||||||||||||||| |||||||||||    
T  7058114 ggcaaaagttatggtgcataaggaaatac-ttatgcaccgtgcataaacacttcacaaccatc 7058175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 372
Target Start/End: Original strand, 18022053 - 18022099
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||    
T  18022053 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 18022099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 40012247 - 40012186
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 388  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||| || | |||||||||    
T  40012247 ggcaaaagttatggtgcataagg-atttccttatgcaccatgcataaagactttacaaccatc 40012186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 4836738 - 4836701
Alignment:
Q  355 cttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4836738 cttatgcaccgtgcataaacacttcacaaccatcagat 4836701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 4842183 - 4842146
Alignment:
Q  355 cttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4842183 cttatgcaccgtgcataaacacttcacaaccatcagat 4842146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 7614094 - 7614133
Alignment:
Q  353 tccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  7614094 tccttatgcaccatgcataaacacttcacaaccatcagat 7614133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 376
Target Start/End: Complemental strand, 10443632 - 10443586
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 376  Q
    ||||||||  |||||||| |||||||||||||||| |||||||||||    
T  10443632 aaagttattatgcataagccatttccttatgcaccctgcataaacac 10443586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 15181790 - 15181856
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||  |||||||    |||||||||||||| ||||||||||| |||||| ||||||||    
T  15181790 ggcaaaagttattatgcataatatgtttccttatgcaccctgcataaacacttcacaagcatcagat 15181856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 28698643 - 28698578
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcat-aaacacatcacaaccatcagattt 394  Q
    ||||||||  |||||||| ||||| |||||||||| ||||| |||||  |||||||||||||||||    
T  28698643 aaagttattatgcataagccattttcttatgcaccctgcattaaacatttcacaaccatcagattt 28698578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 30651973 - 30652009
Alignment:
Q  350 atttccttatgcaccgtgcataaacacatcacaacca 386  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  30651973 atttccttatgcaccctgcataaacacttcacaacca 30652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 15416663 - 15416768
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  15416663 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 15416762  T
Q  424 cacttt 429  Q
    ||||||    
T  15416763 cacttt 15416768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 3884101 - 3883997
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||    
T  3884101 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcaaatttctttcattttgaacaaaaatggttttggctc 3884002  T
Q  425 acttt 429  Q
    |||||    
T  3884001 acttt 3883997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 430
Target Start/End: Complemental strand, 26637903 - 26637798
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  26637903 ggcaaaagttatggtgcataagccattttcttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttggctc 26637804  T
Q  425 acttta 430  Q
    ||||||    
T  26637803 acttta 26637798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 13552983 - 13553087
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggctc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  13552983 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 13553082  T
Q  425 acttt 429  Q
    |||||    
T  13553083 acttt 13553087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 14940418 - 14940318
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctcactt 428  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  14940418 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 14940319  T
Q  429 t 429  Q
    |    
T  14940318 t 14940318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 37456679 - 37456784
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaat-ggtttggct 423  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  37456679 cggcaaaagttatggtgcatgagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttcattttgaacaaaaatagttttggct 37456778  T
Q  424 cacttt 429  Q
    ||||||    
T  37456779 cacttt 37456784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 14394468 - 14394572
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  14394468 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaatacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 14394567  T
Q  425 acttt 429  Q
    |||||    
T  14394568 acttt 14394572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 30783435 - 30783516
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30783435 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcgcaaccatcagatttctttcattttgaa 30783516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 16552705 - 16552637
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  16552705 ggcaaaagttattatgcataagtcatttccttatgcaccatgcataaacacttcacaaccatcatattt 16552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 33868155 - 33868223
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  33868155 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgattt 33868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 16668858 - 16668794
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  16668858 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatcagat 16668794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 4674965 - 4675025
Alignment:
Q  331 aagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaga 391  Q
    |||||||  ||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  4674965 aagttattatgcgtaagtcatttccttatgcaccctgcataaacacttcacaaccatcaga 4675025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 13362772 - 13362835
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  13362772 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 13362835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 25017280 - 25017217
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  25017280 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 25017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 28070218 - 28070153
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||| |||||||    
T  28070218 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatcagat 28070153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 34329127 - 34329192
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | | ||||||||||||||||||||| |||||||||||||||    
T  34329127 ggcaaaagttatggtgcataaggaaat-ctttatgcaccgtgcataaacacttcacaaccatcagat 34329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 18465620 - 18465556
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||  |||||||| |||||| ||||||| | ||||||||||| |||||||||||||||    
T  18465620 caaaagttattatgcataagacatttcattatgcatcctgcataaacacttcacaaccatcagat 18465556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 23335772 - 23335707
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | || |||||||||||||||||||  |||||||||||||||    
T  23335772 ggcaaaagttatggtgcataaggaaat-ccgtatgcaccgtgcataaacatttcacaaccatcagat 23335707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 42512225 - 42512264
Alignment:
Q  353 tccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  42512225 tccttatccaccgtgcataaacacttcacaaccatcagat 42512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 39056518 - 39056461
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||||||||  ||||||| |||||| |||||||||| ||| ||||||| ||||||    
T  39056518 ggcaaaagttattatgcataaatcattttcttatgcaccctgcttaaacacttcacaa 39056461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 7183142 - 7183194
Alignment:
Q  331 aagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||  ||||||||||| ||||||||||||  ||||||||||| ||||||    
T  7183142 aagttattatgcataagtcagttccttatgcacactgcataaacacttcacaa 7183194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 15016633 - 15016528
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggct 423  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  15016633 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 15016534  T
Q  424 cacttt 429  Q
    ||||||    
T  15016533 cacttt 15016528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 328 - 430
Target Start/End: Original strand, 34464713 - 34464816
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctcac 426  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  34464713 caaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcac 34464812  T
Q  427 ttta 430  Q
    ||||    
T  34464813 ttta 34464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 325 - 419
Target Start/End: Original strand, 39355034 - 39355128
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  39355034 cggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttt 39355128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 8149830 - 8149935
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggct 423  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  8149830 cggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggct 8149929  T
Q  424 cacttt 429  Q
    ||||||    
T  8149930 cacttt 8149935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 8154454 - 8154559
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatg-gtttggct 423  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  8154454 cggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggct 8154553  T
Q  424 cacttt 429  Q
    ||||||    
T  8154554 cacttt 8154559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 9143585 - 9143678
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  9143585 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttt 9143678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 7487320 - 7487216
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgg-tttggctc 424  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  7487320 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 7487221  T
Q  425 acttt 429  Q
    |||||    
T  7487220 acttt 7487216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 1292245 - 1292152
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1292245 ggcaaaagttatggtgcataagttattttcttatgcaccgtacataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttt 1292152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 18762867 - 18762928
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18762867 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccat 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 405
Target Start/End: Original strand, 2263572 - 2263652
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttg 405  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||  |||| ||||||||||    
T  2263572 cggcaaaagttatggtgcataagccatttctttatgcaccgtgcataaacacttcacaaccatcgcatttatttcattttg 2263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 5098718 - 5098784
Alignment:
Q  328 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  5098718 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 5098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 18298177 - 18298111
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  18298177 cggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 18298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 25995286 - 25995354
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||  |||||||| |||||||||||||||  |||||||| || |||||||||||||||||    
T  25995286 ggcaaaagttattatgcataagacatttccttatgcactctgcataaatacttcacaaccatcagattt 25995354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 36637003 - 36636935
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||  |||||||||||||| |||||| ||| | ||||||||| |||||||||||||||||    
T  36637003 ggcaaaagttattatgcataagtcattttcttatgtaccctacataaacacttcacaaccatcagattt 36636935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 394
Target Start/End: Original strand, 39548058 - 39548110
Alignment:
Q  342 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  39548058 cataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 39548110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 392
Target Start/End: Original strand, 25192891 - 25192957
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||| ||||    
T  25192891 cggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccattagat 25192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 20709774 - 20709839
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | |||||| |||||||||||||||| |||||||||||||||    
T  20709774 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatcagat 20709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 41346103 - 41346045
Alignment:
Q  329 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    ||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||    
T  41346103 aaaagttatggtgcataagccattttcttatgcaccgtatataaacacttcacaaccat 41346045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 13081922 - 13081858
Alignment:
Q  330 aaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||  ||||||||||||||| ||||||||| | ||||||||| ||||||||||| |||||    
T  13081922 aaagttattatgcataagtcatttcattatgcaccctacataaacacttcacaaccatctgattt 13081858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 372
Target Start/End: Original strand, 21155441 - 21155480
Alignment:
Q  333 gttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  21155441 gttatggtgcataagccatttccttatgcaccgtgcataa 21155480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 372
Target Start/End: Complemental strand, 27974330 - 27974291
Alignment:
Q  333 gttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27974330 gttatggtgcataagccatttccttatgcaccgtgcataa 27974291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 372
Target Start/End: Complemental strand, 28060859 - 28060820
Alignment:
Q  333 gttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  28060859 gttatggtgcataagccatttccttatgcaccgtgcataa 28060820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 372
Target Start/End: Original strand, 3925578 - 3925624
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataa 372  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||    
T  3925578 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 3925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 4281854 - 4281788
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||  |||||||| |||||||||||| ||  || |||||||| |||||||||||||||    
T  4281854 ggcaaaagttattatgcataagacatttccttatgtactctgtataaacacttcacaaccatcagat 4281788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 14551382 - 14551319
Alignment:
Q  327 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||  | ||| |||||||| |||||||||||| |||||||||||||||    
T  14551382 gcaaaagttatggtgcataaggaaattc-ttatgcac-gtgcataaacacttcacaaccatcagat 14551319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 24024685 - 24024633
Alignment:
Q  331 aagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||  ||||||||||| ||||||||||||| ||||||||||| ||||||    
T  24024685 aagttattatgcataagtcaattccttatgcaccatgcataaacacttcacaa 24024633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 386
Target Start/End: Complemental strand, 40853740 - 40853685
Alignment:
Q  331 aagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaacca 386  Q
    |||||||  |||||||| |||||||||||||| | ||||||||||| |||||||||    
T  40853740 aagttattatgcataagccatttccttatgcatcctgcataaacacttcacaacca 40853685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 16142127 - 16142073
Alignment:
Q  340 tgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    |||| ||| |||||||||||||||  ||||||||||| |||||||||| ||||||    
T  16142127 tgcacaagccatttccttatgcacgctgcataaacacttcacaaccattagattt 16142073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 44352746 - 44352679
Alignment:
Q  324 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||||| || |  |||||||||| |||||||    ||||||||||||||||    
T  44352746 ccggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagttaatcacaaccatcagat 44352679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 8488 - 8383
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaat-ggtttggct 423  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  8488 cggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggct 8389  T
Q  424 cacttt 429  Q
    ||||||    
T  8388 cacttt 8383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 743 - 661
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 407  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  743 cggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 661  T

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Target: scaffold0074 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 325 - 419
Target Start/End: Original strand, 24273 - 24367
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttt 419  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  24273 cggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcacaaccattaaatttctttgattttgaacaaaaatggttt 24367  T

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Target: scaffold0238 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 25297 - 25230
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||||    
T  25297 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 25230  T

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Target: scaffold0460 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 1601 - 1661
Alignment:
Q  323 accggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||||| ||||  ||||||||||||||||||||||||| ||||||||||| ||||||    
T  1601 accggcaaaaattattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 1661  T

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Target: scaffold0097 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 13613 - 13678
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  | | |||||| |||||||||||||||| |||||||||||||||    
T  13613 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatcagat 13678  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 209325 - 209383
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||||||||  |||||||||||||| |||||||||| ||||||||||| ||||||    
T  209325 cggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 209383  T

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Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 171503 - 171562
Alignment:
Q  324 ccggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||||| ||||  ||||||||||||||||||||||||| || |||||||| ||||||    
T  171503 ccggcaaaaattattatgcataagtcatttccttatgcaccctgtataaacacttcacaa 171562  T

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Target: scaffold0544 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 10739 - 10675
Alignment:
Q  327 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||||||||||||||||||||  | | |||||| |||||||||||||||| |||||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaat-ccttatacaccgtgcataaacacttcacaaccatcagat 10675  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 376
Target Start/End: Original strand, 450201 - 450252
Alignment:
Q  325 cggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 376  Q
    |||||||||||||  |||||||||||||||||||| |||| |||||||||||    
T  450201 cggcaaaagttattatgcataagtcatttccttatacaccttgcataaacac 450252  T

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Target: scaffold0558 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 2448 - 2508
Alignment:
Q  327 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 388  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||  | ||||||||||||    
T  2448 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 2508  T

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Target: scaffold0558; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 5860 - 5920
Alignment:
Q  327 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 388  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||  | ||||||||||||    
T  5860 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 5920  T

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Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 51359 - 51416
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    ||||||| ||||  |||||||||||||| |||||||||| ||||||||||| ||||||    
T  51359 ggcaaaaattattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 51416  T

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Target: scaffold0189 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 11255 - 11188
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagattt 394  Q
    ||||||||||||||||||||||  | | |||||||||| |||||||| ||| |||||||||||| ||||    
T  11255 ggcaaaagttatggtgcataaggaaat-ccttatgcactgtgcataagcacttcacaaccatcatattt 11188  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 119199 - 119259
Alignment:
Q  323 accggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaa 383  Q
    |||||||||||||||  | |||||||||||||  |||||||| ||||||||||| ||||||    
T  119199 accggcaaaagttattatacataagtcatttctatatgcaccctgcataaacacttcacaa 119259  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 19045 - 18980
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    ||||||||||||||||||||||  |||| |||||||||| | |||||  | ||||||||||||||||    
T  19045 ggcaaaagttatggtgcataag-gatttgcttatgcaccatacataaggaaatcacaaccatcagat 18980  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 164058 - 164118
Alignment:
Q  326 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccat 387  Q
    |||||||| |||||||||||||  ||||||||||||||| | ||||| || |||||||||||    
T  164058 ggcaaaagctatggtgcataagg-atttccttatgcaccatacataagcaaatcacaaccat 164118  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 7046 - 7082
Alignment:
Q  356 ttatgcaccgtgcataaacacatcacaaccatcagat 392  Q
    |||| |||||||||||||||| |||||||||||||||    
T  7046 ttatacaccgtgcataaacacttcacaaccatcagat 7082  T

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