View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1348_low_50 (Length: 375)

Name: NF1348_low_50
Description: NF1348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1348_low_50
NF1348_low_50
[»] chr5 (31 HSPs)
chr5 (260-350)||(19752911-19753000)
chr5 (260-346)||(25523068-25523154)
chr5 (260-350)||(19754142-19754233)
chr5 (261-343)||(22940641-22940723)
chr5 (260-346)||(18486918-18487004)
chr5 (260-346)||(40255688-40255774)
chr5 (264-344)||(20216781-20216861)
chr5 (260-346)||(16650871-16650957)
chr5 (260-346)||(28538675-28538761)
chr5 (260-343)||(33160305-33160388)
chr5 (260-346)||(5778852-5778938)
chr5 (261-343)||(20214196-20214277)
chr5 (260-346)||(25055411-25055497)
chr5 (260-346)||(36486504-36486590)
chr5 (264-338)||(24332916-24332990)
chr5 (261-338)||(1796054-1796131)
chr5 (261-346)||(25056397-25056482)
chr5 (260-346)||(5777900-5777984)
chr5 (260-339)||(18485137-18485216)
chr5 (260-346)||(25524143-25524230)
chr5 (260-343)||(33158097-33158180)
chr5 (260-338)||(18154493-18154570)
chr5 (264-346)||(28539836-28539917)
chr5 (260-336)||(5730440-5730517)
chr5 (264-337)||(2685749-2685820)
chr5 (261-346)||(5962588-5962671)
chr5 (260-346)||(7311589-7311675)
chr5 (264-346)||(42195137-42195217)
chr5 (285-350)||(2686413-2686478)
chr5 (263-346)||(36485302-36485385)
chr5 (285-335)||(34893689-34893739)
[»] chr4 (45 HSPs)
chr4 (26-92)||(21055152-21055218)
chr4 (260-346)||(1290214-1290300)
chr4 (260-346)||(52491623-52491709)
chr4 (260-350)||(49308040-49308128)
chr4 (260-344)||(17382992-17383075)
chr4 (260-344)||(17388229-17388312)
chr4 (264-343)||(8758856-8758935)
chr4 (260-346)||(1963195-1963281)
chr4 (261-346)||(10471404-10471489)
chr4 (264-343)||(12129626-12129705)
chr4 (260-346)||(25685838-25685924)
chr4 (264-346)||(8155741-8155822)
chr4 (263-346)||(19750591-19750673)
chr4 (263-346)||(19789133-19789215)
chr4 (260-346)||(31599788-31599874)
chr4 (261-343)||(31601004-31601086)
chr4 (264-346)||(35935549-35935631)
chr4 (260-348)||(3928872-3928960)
chr4 (261-344)||(1834119-1834202)
chr4 (260-339)||(8757674-8757752)
chr4 (260-343)||(26421641-26421723)
chr4 (260-346)||(1835118-1835204)
chr4 (260-346)||(10470545-10470631)
chr4 (260-346)||(48780247-48780333)
chr4 (260-346)||(48781062-48781147)
chr4 (260-336)||(13386013-13386090)
chr4 (261-346)||(25684934-25685019)
chr4 (264-343)||(35934347-35934424)
chr4 (264-344)||(55603549-55603628)
chr4 (261-339)||(1964464-1964542)
chr4 (260-346)||(5526142-5526227)
chr4 (264-337)||(55602379-55602451)
chr4 (260-346)||(13386548-13386635)
chr4 (261-350)||(33310101-33310187)
chr4 (260-346)||(5525359-5525444)
chr4 (261-346)||(10447006-10447092)
chr4 (260-346)||(21177996-21178081)
chr4 (264-337)||(1289100-1289173)
chr4 (260-348)||(3927665-3927753)
chr4 (260-336)||(14868889-14868964)
chr4 (260-336)||(14876970-14877045)
chr4 (260-351)||(10448271-10448362)
chr4 (271-346)||(21539087-21539162)
chr4 (260-338)||(49306774-49306851)
chr4 (260-338)||(13509383-13509460)
[»] chr2 (35 HSPs)
chr2 (260-346)||(7899898-7899984)
chr2 (260-346)||(22848190-22848276)
chr2 (260-344)||(36449777-36449861)
chr2 (260-346)||(38840509-38840595)
chr2 (264-344)||(36450939-36451018)
chr2 (260-339)||(18904366-18904445)
chr2 (260-346)||(23869551-23869636)
chr2 (260-346)||(38839241-38839327)
chr2 (261-350)||(18299373-18299462)
chr2 (260-343)||(18906006-18906089)
chr2 (260-338)||(18868923-18869001)
chr2 (260-343)||(22587973-22588055)
chr2 (264-346)||(7898694-7898776)
chr2 (260-346)||(11258827-11258913)
chr2 (260-346)||(11938805-11938890)
chr2 (264-338)||(13567975-13568049)
chr2 (260-346)||(41879228-41879314)
chr2 (261-346)||(1034485-1034570)
chr2 (262-346)||(13030293-13030374)
chr2 (261-343)||(41878092-41878176)
chr2 (262-343)||(18300743-18300822)
chr2 (260-344)||(13570575-13570659)
chr2 (260-346)||(18797245-18797332)
chr2 (261-343)||(24476863-24476943)
chr2 (285-344)||(32739647-32739706)
chr2 (260-338)||(802615-802692)
chr2 (260-338)||(16446153-16446231)
chr2 (285-347)||(24475248-24475310)
chr2 (285-346)||(22587525-22587585)
chr2 (260-318)||(21837299-21837355)
chr2 (260-346)||(11257621-11257706)
chr2 (285-343)||(28617946-28618004)
chr2 (262-336)||(1033212-1033284)
chr2 (289-338)||(810805-810854)
chr2 (264-344)||(8534586-8534665)
[»] chr1 (45 HSPs)
chr1 (260-346)||(11437215-11437301)
chr1 (260-346)||(24422799-24422885)
chr1 (260-346)||(11436041-11436127)
chr1 (260-346)||(52274967-52275053)
chr1 (261-346)||(51684366-51684451)
chr1 (264-346)||(24426091-24426173)
chr1 (260-346)||(35067018-35067104)
chr1 (261-346)||(39699783-39699867)
chr1 (261-346)||(45148581-45148665)
chr1 (260-339)||(23980489-23980568)
chr1 (264-343)||(37526896-37526975)
chr1 (260-338)||(14999284-14999361)
chr1 (261-334)||(39222501-39222575)
chr1 (260-346)||(51685781-51685867)
chr1 (261-346)||(36613920-36614005)
chr1 (260-341)||(39698562-39698643)
chr1 (261-346)||(41364829-41364913)
chr1 (264-344)||(45149989-45150068)
chr1 (260-336)||(52827346-52827422)
chr1 (260-338)||(11190384-11190462)
chr1 (260-346)||(12389997-12390083)
chr1 (264-338)||(39153140-39153214)
chr1 (260-346)||(44404441-44404527)
chr1 (260-338)||(45157233-45157310)
chr1 (260-343)||(35594216-35594298)
chr1 (260-338)||(7674527-7674603)
chr1 (260-338)||(33088641-33088719)
chr1 (260-346)||(36612852-36612937)
chr1 (264-338)||(39151934-39152008)
chr1 (264-338)||(43378737-43378810)
chr1 (264-346)||(50680335-50680416)
chr1 (261-339)||(50681627-50681705)
chr1 (264-346)||(52828086-52828168)
chr1 (260-343)||(43060025-43060108)
chr1 (260-334)||(14999983-15000057)
chr1 (260-337)||(16290092-16290170)
chr1 (264-342)||(43058789-43058866)
chr1 (298-337)||(44411991-44412030)
chr1 (260-346)||(7675475-7675560)
chr1 (264-346)||(7983053-7983134)
chr1 (264-330)||(52276195-52276261)
chr1 (260-343)||(35595210-35595295)
chr1 (285-337)||(33088091-33088143)
chr1 (260-307)||(39221357-39221405)
chr1 (260-308)||(41366184-41366232)
[»] chr3 (52 HSPs)
chr3 (260-346)||(29931225-29931311)
chr3 (260-346)||(29980379-29980465)
chr3 (260-346)||(54540806-54540892)
chr3 (262-346)||(8456479-8456562)
chr3 (260-350)||(12700174-12700262)
chr3 (264-346)||(7267647-7267728)
chr3 (260-346)||(7758401-7758487)
chr3 (260-343)||(29932718-29932800)
chr3 (260-343)||(29981872-29981954)
chr3 (260-338)||(54539754-54539832)
chr3 (260-343)||(55192014-55192096)
chr3 (260-350)||(12703512-12703601)
chr3 (260-338)||(19984848-19984926)
chr3 (260-346)||(22776828-22776914)
chr3 (261-346)||(47614185-47614270)
chr3 (260-344)||(53614818-53614902)
chr3 (260-346)||(534498-534584)
chr3 (264-346)||(47610596-47610678)
chr3 (260-318)||(47615592-47615650)
chr3 (260-343)||(24516459-24516542)
chr3 (264-350)||(40426790-40426877)
chr3 (264-346)||(7268843-7268924)
chr3 (260-350)||(11671353-11671442)
chr3 (260-336)||(5001199-5001275)
chr3 (260-348)||(28262192-28262279)
chr3 (260-348)||(28263125-28263213)
chr3 (260-336)||(47609696-47609772)
chr3 (260-348)||(52276303-52276391)
chr3 (260-348)||(52281561-52281649)
chr3 (260-339)||(51038813-51038892)
chr3 (261-336)||(51469972-51470047)
chr3 (260-346)||(5029699-5029784)
chr3 (261-346)||(535798-535883)
chr3 (260-348)||(18442629-18442718)
chr3 (260-348)||(19487703-19487792)
chr3 (260-338)||(19986094-19986174)
chr3 (261-346)||(51037536-51037620)
chr3 (261-346)||(52840620-52840705)
chr3 (261-348)||(18456077-18456165)
chr3 (261-337)||(46719941-46720017)
chr3 (260-336)||(51470481-51470556)
chr3 (264-346)||(34019161-34019241)
chr3 (260-346)||(8875905-8875991)
chr3 (264-346)||(23770423-23770505)
chr3 (261-346)||(53901404-53901487)
chr3 (285-337)||(6170296-6170348)
chr3 (285-337)||(6249633-6249685)
chr3 (260-343)||(23769856-23769939)
chr3 (260-346)||(46721236-46721322)
chr3 (261-335)||(49216247-49216321)
chr3 (288-337)||(31645000-31645049)
chr3 (264-346)||(52104484-52104562)
[»] scaffold0302 (2 HSPs)
scaffold0302 (260-344)||(17469-17553)
scaffold0302 (261-343)||(18795-18877)
[»] chr8 (45 HSPs)
chr8 (266-346)||(1824094-1824174)
chr8 (266-346)||(1858539-1858619)
chr8 (262-350)||(18979132-18979220)
chr8 (260-346)||(10007779-10007865)
chr8 (260-346)||(12353377-12353461)
chr8 (261-346)||(10006344-10006429)
chr8 (260-346)||(5513981-5514066)
chr8 (260-346)||(12351920-12352006)
chr8 (264-346)||(29968353-29968434)
chr8 (264-343)||(40471166-40471244)
chr8 (260-346)||(22221380-22221466)
chr8 (260-346)||(22227722-22227808)
chr8 (270-343)||(18978029-18978101)
chr8 (261-346)||(22220388-22220473)
chr8 (260-348)||(38980058-38980146)
chr8 (260-348)||(39011155-39011243)
chr8 (261-348)||(38974795-38974882)
chr8 (261-348)||(39005893-39005980)
chr8 (260-346)||(1823551-1823637)
chr8 (260-346)||(1857996-1858082)
chr8 (264-346)||(8389705-8389787)
chr8 (264-346)||(11282011-11282093)
chr8 (264-346)||(11287779-11287861)
chr8 (260-341)||(32207346-32207425)
chr8 (260-346)||(43661839-43661925)
chr8 (270-343)||(18970920-18970992)
chr8 (260-341)||(45114537-45114618)
chr8 (260-348)||(32968455-32968543)
chr8 (260-346)||(8388463-8388547)
chr8 (260-346)||(30335638-30335724)
chr8 (299-351)||(18488273-18488325)
chr8 (261-348)||(32973950-32974037)
chr8 (260-343)||(42982676-42982759)
chr8 (263-346)||(43661267-43661350)
chr8 (260-346)||(24122882-24122967)
chr8 (261-319)||(24483143-24483201)
chr8 (285-338)||(24488703-24488756)
chr8 (261-310)||(36249552-36249601)
chr8 (261-337)||(30336526-30336602)
chr8 (261-327)||(23170034-23170098)
chr8 (260-338)||(5514294-5514371)
chr8 (260-343)||(5003116-5003198)
chr8 (261-346)||(11283225-11283310)
chr8 (260-317)||(11456637-11456694)
chr8 (260-308)||(11288914-11288962)
[»] chr7 (30 HSPs)
chr7 (260-346)||(22630468-22630554)
chr7 (261-346)||(18371424-18371509)
chr7 (260-343)||(7501871-7501954)
chr7 (260-346)||(7500454-7500539)
chr7 (260-346)||(17782569-17782655)
chr7 (261-346)||(31659622-31659708)
chr7 (260-336)||(127336-127411)
chr7 (260-336)||(3227620-3227696)
chr7 (260-336)||(31949828-31949904)
chr7 (260-339)||(11658378-11658457)
chr7 (264-346)||(42886302-42886384)
chr7 (289-346)||(18372473-18372530)
chr7 (266-346)||(14999171-14999249)
chr7 (260-343)||(21505415-21505496)
chr7 (260-346)||(22629482-22629571)
chr7 (260-346)||(31949321-31949407)
chr7 (263-336)||(17781663-17781736)
chr7 (261-346)||(47525383-47525468)
chr7 (264-344)||(11662569-11662649)
chr7 (260-335)||(34174010-34174084)
chr7 (268-335)||(47524532-47524599)
chr7 (260-333)||(20163585-20163658)
chr7 (264-346)||(128617-128699)
chr7 (262-336)||(3227109-3227182)
chr7 (260-342)||(34352806-34352888)
chr7 (261-338)||(48934927-48935004)
chr7 (284-340)||(43899469-43899525)
chr7 (260-343)||(47369780-47369863)
chr7 (260-317)||(15681594-15681651)
chr7 (261-345)||(769413-769497)
[»] scaffold0019 (2 HSPs)
scaffold0019 (262-350)||(61471-61559)
scaffold0019 (261-350)||(60090-60179)
[»] chr6 (26 HSPs)
chr6 (260-343)||(7316313-7316396)
chr6 (260-338)||(16704521-16704599)
chr6 (260-346)||(8659264-8659350)
chr6 (260-346)||(8821872-8821958)
chr6 (260-346)||(14822359-14822445)
chr6 (261-346)||(16703570-16703652)
chr6 (260-346)||(27437827-27437913)
chr6 (261-346)||(7314880-7314964)
chr6 (261-346)||(8822809-8822894)
chr6 (260-344)||(10784591-10784676)
chr6 (264-346)||(1829619-1829701)
chr6 (260-346)||(27322084-27322169)
chr6 (260-337)||(6842308-6842385)
chr6 (260-328)||(3721611-3721679)
chr6 (260-346)||(14823591-14823678)
chr6 (260-346)||(8660220-8660305)
chr6 (285-346)||(26575070-26575131)
chr6 (260-336)||(3722533-3722609)
chr6 (260-336)||(27318314-27318389)
chr6 (264-346)||(34834595-34834677)
chr6 (260-332)||(26574618-26574690)
chr6 (266-342)||(29473082-29473158)
chr6 (260-338)||(6840193-6840269)
chr6 (261-343)||(30495717-30495797)
chr6 (263-309)||(26717137-26717183)
chr6 (260-337)||(3333051-3333128)
[»] scaffold0320 (1 HSPs)
scaffold0320 (260-338)||(19487-19565)
[»] scaffold2034 (2 HSPs)
scaffold2034 (261-346)||(233-318)
scaffold2034 (284-344)||(996-1056)
[»] scaffold0294 (2 HSPs)
scaffold0294 (260-343)||(5457-5540)
scaffold0294 (260-346)||(4441-4527)
[»] scaffold0003 (1 HSPs)
scaffold0003 (260-346)||(49449-49535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (261-348)||(133-220)
[»] scaffold0093 (2 HSPs)
scaffold0093 (262-346)||(2481-2564)
scaffold0093 (262-346)||(7104-7187)
[»] scaffold1303 (1 HSPs)
scaffold1303 (260-346)||(1438-1524)
[»] scaffold0632 (1 HSPs)
scaffold0632 (260-346)||(3324-3409)
[»] scaffold0059 (1 HSPs)
scaffold0059 (262-338)||(4754-4829)
[»] scaffold0045 (1 HSPs)
scaffold0045 (261-337)||(49109-49185)
[»] scaffold0112 (1 HSPs)
scaffold0112 (261-346)||(37148-37232)
[»] scaffold0586 (1 HSPs)
scaffold0586 (264-346)||(6346-6428)
[»] scaffold0186 (2 HSPs)
scaffold0186 (261-334)||(23081-23152)
scaffold0186 (260-321)||(23931-23992)


Alignment Details
Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 350
Target Start/End: Original strand, 19752911 - 19753000
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19752911 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgat 19753000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 25523068 - 25523154
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||| |||||||    
T  25523068 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgacccccta 25523154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 19754233 - 19754142
Alignment:
Q  260 aggctaaagtgcacttttc-ccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    ||||||||||||| ||||  ||||  |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19754233 aggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgat 19754142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 22940723 - 22940641
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgacccc 22940641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 18487004 - 18486918
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||| || | |||| |||||||||||||||||    
T  18487004 aggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggcccccta 18486918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 40255774 - 40255688
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  |||| ||| |||| ||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  40255774 aggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggcccccta 40255688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 20216861 - 20216781
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||| |  ||||| ||||||||||||||||||||||||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccc 20216781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 16650957 - 16650871
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||  ||||||| || ||||||||||||||| ||||||||    
T  16650957 aggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagcccccta 16650871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 28538675 - 28538761
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||  ||| ||| |||||||||||||||||| ||||||||    
T  28538675 aggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagcccccta 28538761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 33160388 - 33160305
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||||| | ||||||| || | |||||||||||||| ||||    
T  33160388 aggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgacccc 33160305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 5778938 - 5778852
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||| | ||||||| ||| ||||| ||||||| | |||||||    
T  5778938 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagccccccta 5778852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 20214196 - 20214277
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| |  | |||  ||||||||||||||||||||||||    
T  20214196 ggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccc 20214277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 25055411 - 25055497
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  ||||||| ||   |||||||||||| |||||||  || ||||||||||||||||||||||||    
T  25055411 aggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggcccccta 25055497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 36486590 - 36486504
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||| |||||||||||| ||||  ||||||| |||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtccccta 36486504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 24332916 - 24332990
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||||| |||| |||| |||||||| ||||||||||||| ||| ||  |||||||||||||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 24332990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 1796054 - 1796131
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||| |||||| ||  |||||||||||| ||||||| ||||| | ||||| |||||||||||||||||||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 25056482 - 25056397
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| |   |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 25056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 5777900 - 5777984
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  5777900 aggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 5777984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 18485137 - 18485216
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    |||||||||||||||||| ||||  ||||||| |||| ||||||||||||| ||||||| ||  ||||| ||||||||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgg 18485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 25524230 - 25524143
Alignment:
Q  260 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||   ||| ||| ||||  ||| |||||||| ||||||| |||||||||||||||||||||| ||||    
T  25524230 aggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcctccta 25524143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 33158097 - 33158180
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||| ||||  |||  |||||||||||| ||||||||||||   |||||| ||||||||||||||||||| ||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgacccc 33158180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 18154493 - 18154570
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||| ||||||  ||| ||||||||||||| ||| ||||||| | ||||||| |||||||||||||||||||    
T  18154493 aggctaaagtgaacttttttccccttaactttcaaaaacttacaatttt-gacccctaagtacaaaaactacaattttg 18154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 28539917 - 28539836
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||| ||||||||| | |||||| |||| ||||||||||||  || |||| |||||||||||||||||||| ||||||    
T  28539917 taaagtgcatttttcccccct-aacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtccccta 28539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 5730440 - 5730517
Alignment:
Q  260 aggctaaagtgcacttttccccca-ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||   ||||| ||| ||||| |||||||    
T  5730440 aggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 2685749 - 2685820
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    |||| |||||| |||||||  ||| |||||||| |||  |||||||||||||||| ||||||||||||||||||    
T  2685749 taaaatgcactattccccc--taattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 5962671 - 5962588
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| || |  | ||||||||||  ||| |||||||||||||||| ||||||||||| |||||| ||| ||||    
T  5962671 ggctaaagtgcactttttccac--tgactttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccaccta 5962588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 7311589 - 7311675
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||    |||||  |||||||||||| |||||||| |||| | || || |||||||||||||||||| ||||||||    
T  7311589 aggctaaagtgcacccccccccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagcccccta 7311675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 42195137 - 42195217
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| |||||||| ||||  |||| ||||||| ||||||  ||||||| |||||||||||| ||||||    
T  42195137 taaagtgcacttttccccc-ttaactttaaaaag-ttgcgattttggccccctatgtacaaaatctacaattttggtccccta 42195217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 2686478 - 2686413
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    ||||||| |||| |||||||||||| || | ||| ||||||||||| |||||||| ||||||||||    
T  2686478 taacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgat 2686413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 36485302 - 36485385
Alignment:
Q  263 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||| |||||| ||  ||||||| |||| ||| ||||||||  | | ||| ||||||||||| |||||||||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggcccccta 36485385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 335  Q
    |||||||||||| |||||||||||||  |||||  ||||||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 21055218 - 21055152
Alignment:
Q  26 gaagaagaaaaattaatgttttggaaggaaaatcgttatggcttttgaaattttatattttattttc 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21055218 gaagaagaaaaattaatgttttggaaggaaaatcgttatggcttttgaaattttatattttattttc 21055152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 1290300 - 1290214
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||| |||||||||||||||||| ||||||||    
T  1290300 aggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagcccccta 1290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 52491709 - 52491623
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||| |||||||| || ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  52491709 aggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggcccccta 52491623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 49308128 - 49308040
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  49308128 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gccccctatgat 49308040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 17382992 - 17383075
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||| ||| | ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17382992 aggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccc 17383075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 17388312 - 17388229
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  17388312 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccc 17388229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 8758935 - 8758856
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggcccc 8758856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 1963195 - 1963281
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||| | ||||  |||||||||||||||||| ||||||||    
T  1963195 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagcccccta 1963281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 10471489 - 10471404
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 10471404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 343
Target Start/End: Original strand, 12129626 - 12129705
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgacccc 12129705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 25685924 - 25685838
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  25685924 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagacccccta 25685838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 8155741 - 8155822
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttgg-tcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||  |||||||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||||    
T  8155741 taaagtgcacttttccccc--taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggcccccta 8155822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 19750673 - 19750591
Alignment:
Q  263 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||| ||||||| ||||||||||||||||||  |||||||    
T  19750673 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttaccccccta 19750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 19789133 - 19789215
Alignment:
Q  263 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||| ||||||| ||||||||||||||||||  |||||||    
T  19789133 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttaccccccta 19789215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 31599788 - 31599874
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||| |||||||||||| ||||  ||||||| |||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtccccta 31599874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 31601086 - 31601004
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||| ||||  ||||||| |||| ||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgacccc 31601004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 35935631 - 35935549
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| ||||| |||||||| ||||  |||||||||| | ||||||| |||| ||||||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggcccccta 35935549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 3928960 - 3928872
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| ||||||  ||  ||||| ||||||||||||| |||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatg 3928872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 344
Target Start/End: Original strand, 1834119 - 1834202
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||||||  ||||||| |||| ||| ||||||||  ||||||  || ||||||||||||||||||||||    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggccccc 1834202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 8757674 - 8757752
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    |||||||||||||||||| |||| ||||||||||||| ||| ||||||| | ||||||| |||| |||||||||||||||    
T  8757674 aggctaaagtgcactttttcccc-ttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttgg 8757752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 26421723 - 26421641
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||||||||  | ||||||||||| ||||||||||||  | ||||| ||||||||||||||||||| ||||    
T  26421723 aggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgacccc 26421641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 1835204 - 1835118
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||  |  |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  1835204 aggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 1835118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 10470545 - 10470631
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  || |||| ||| ||||  ||||||| | |||||||    
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagccccccta 10470631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 48780247 - 48780333
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  ||||||| |||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  48780247 aggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 48780333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 48781147 - 48781062
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  ||||||||||||  ||||||||||||| |||||| ||| ||||| ||||||| | |||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggt-ccctaagtactaaaaccacaatttagccccccta 48781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 13386013 - 13386090
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttc-aaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||||||  |||||||| |||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  13386013 aggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 13386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 25684934 - 25685019
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||  || |||| ||| ||||| ||||||| | |||||||    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagccccccta 25685019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 343
Target Start/End: Original strand, 35934347 - 35934424
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||  |||||||||||| |||| |||||||||||||||| || | ||| || ||||||||||||    
T  35934347 taaagtgcacttttccccc--taactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggcccc 35934424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 55603628 - 55603549
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||  ||||||   |||||||||||| ||||||||||||    
T  55603628 taaagtgcactttttcccc-ttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc 55603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 1964542 - 1964464
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    ||||||||||||||||||| || |||||||| ||||  || ||||||||| ||||||   |||||||||||||||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttgg 1964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 5526227 - 5526142
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  | ||||||||||| ||||||||||||| ||||||| ||  ||||| ||||||| | |||||||    
T  5526227 aggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagccccccta 5526142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 55602379 - 55602451
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||||| |||| ||| ||| |||||||||||||||    
T  55602379 taaagtgcatttttcccct-ttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaatttt 55602451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 13386635 - 13386548
Alignment:
Q  260 aggctaaagtgcactttt-cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| |||||  |||||||||||| ||||||||||||  ||| ||| ||| ||||| ||||||| | |||||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagccccccta 13386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 33310187 - 33310101
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    |||||||||||||||||  ||   ||||||| |||| |||| |||||| |  |||||||||||||||||| ||||||||||| |||||||    
T  33310187 ggctaaagtgcacttttttcc---taacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttggccctctatgat 33310101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 5525359 - 5525444
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||| || ||||||||| | ||||||||||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  5525359 aggctaaagtacatttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 5525444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 10447006 - 10447092
Alignment:
Q  261 ggctaaagtgcacttttccccc-attaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  |||| ||||||||  |||||||||| | ||||||  ||||||||| ||||||||  |||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttaccccccta 10447092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 21177996 - 21178081
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||| ||||| ||||| | |||||||| ||  ||||||||||| |||||||   |||||||||||||||||| |||||||    
T  21177996 aggctaaagtgtactttccccccct-aactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgacccccta 21178081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 1289100 - 1289173
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    ||||||| ||||||||||| ||||||||||||   ||| ||||||| ||| |||| || |||||||||||||||    
T  1289100 taaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaatttt 1289173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 3927665 - 3927753
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  ||||||| ||||  |||| ||||||| |||| |  ||  |||||||||||||||| || |||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttggtcctctatg 3927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 14868889 - 14868964
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||||||  || ||||||||| ||||||||||||| || |||| ||  ||||| |||||||    
T  14868889 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 14877045 - 14876970
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||||||  || ||||||||| ||||||||||||| || |||| ||  ||||| |||||||    
T  14877045 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 351
Target Start/End: Complemental strand, 10448362 - 10448271
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgata 351  Q
    ||||||||||||||||  || ||  ||| ||||||||  |||| ||||| | ||||||  ||||||||||||||||||||||| ||| ||||    
T  10448362 aggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagata 10448271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 21539162 - 21539087
Alignment:
Q  271 cacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||| || |||| ||| |||| ||||||||||||| | ||||| |  |||||||||||||||| |||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgacccccta 21539087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 49306774 - 49306851
Alignment:
Q  260 aggctaaagtgcactttt--cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||||||  ||||||   |||||||||| ||||||||||||| |   ||| |||||||||||||||||||    
T  49306774 aggctaaagtgcacttttttccccca---actttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg 49306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 13509460 - 13509383
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||| ||||||||||| | |||||| ||||  |||||||||||| |||| || ||  |||||||||||||||    
T  13509460 aggctaaagtgtacttttcccccct-aacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttg 13509383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 7899984 - 7899898
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  7899984 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagcccccta 7899898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 22848190 - 22848276
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctcccta 22848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 36449777 - 36449861
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  36449777 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccc 36449861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 38840595 - 38840509
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||||||||    
T  38840595 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccccta 38840509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 36451018 - 36450939
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||    
T  36451018 taaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccc 36450939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 18904366 - 18904445
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||| ||| ||||||||||||||||||||    
T  18904366 aggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttgg 18904445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 23869636 - 23869551
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| || |||||||| ||||| |||||||||||| |||||||||||||||||||||||||| || |||||    
T  23869636 aggctaaagtgcacttttccacccttaactttaaaaac-ttgcaattttggccccctaaatacaaaaactacaattttagctcccta 23869551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 38839241 - 38839327
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| |||| |||| |||| |||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  38839241 aggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggcccccta 38839327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 18299373 - 18299462
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    ||||||||||||||||||| ||  |||||||||||| ||| ||||||||| | ||||| || ||||||||||||||||||||||||||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgat 18299462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 18906089 - 18906006
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||||| | ||||||| |||||||||||||||||| |||||    
T  18906089 aggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccc 18906006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 18868923 - 18869001
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||| |||||||| ||  |||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  18868923 aggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttg 18869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 22588055 - 22587973
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||| ||||||||   |||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttgg-cccctatgtacaaaaactacaattttggcccc 22587973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 7898694 - 7898776
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||| | | ||||| || | ||||||||||||||||||||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggcccccta 7898776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 11258913 - 11258827
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| ||| ||| |  |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtccccta 11258827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 11938890 - 11938805
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||||| ||||| |||||||| || ||||||| |||||||    
T  11938890 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgccccccta 11938805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 13567975 - 13568049
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||| ||||||||||   ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 41879314 - 41879228
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||| ||||||| |||| |||| |||||||| ||||||||||||| ||||||| |||| |||||||||||||  |||||||    
T  41879314 aggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaacccccta 41879228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 1034570 - 1034485
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||||  ||| ||||| ||||||| | |||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagccccccta 1034485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 13030293 - 13030374
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||  |||||||||||| |||| |||||||| ||||||| |||||||| ||||||||| ||||||||    
T  13030293 gctaaagtgcacttttccccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttttgcccccta 13030374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 41878092 - 41878176
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaacct---tgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||| ||||| ||||||||||||| ||   ||||||||||| ||||||| |||| |||||||||||||||||||    
T  41878092 ggctaaagtgcactttcccccc-ttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggcccc 41878176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 18300822 - 18300743
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||| ||||||||||||||  ||||||||| || ||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  18300822 gctaaattgcacttttccccc--taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgacccc 18300743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 13570659 - 13570575
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||| |||||  ||  |||||||||||| ||||||||||| ||||| ||| ||||||||||| |||||||| ||||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccc 13570575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 18797245 - 18797332
Alignment:
Q  260 aggctaaagtgcacttttcc-cccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||||||  ||| ||| ||  ||||||||||||||| |||||||    
T  18797245 aggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgacccccta 18797332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 24476943 - 24476863
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||| ||||||||||| ||||   |||||| |||| |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  24476943 ggctagagtgcactttttccccc--aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccc 24476863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 344
Target Start/End: Original strand, 32739647 - 32739706
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    |||||||||||| ||||||||||||| ||| ||  |||||||||||||||||||||||||    
T  32739647 taactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 802692 - 802615
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||| ||||||||||| | || |||||||| ||||||||||||| |||||   |||||||||||||||||||    
T  802692 aggctaaagtgtacttttcccccct-aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttg 802615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 16446153 - 16446231
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||| |||||  || ||||||||||||| |||||||||||   | | |||||||||||||||||||||||    
T  16446153 aggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttg 16446231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 24475248 - 24475310
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctat 347  Q
    |||||||||||| |||| |||||| | ||||||| || |||||||||||||||||||||||||    
T  24475248 taactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctat 24475310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 22587525 - 22587585
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||  || ||||||||||||||||  |||||||||||||||||||||||||||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggcccccta 22587585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 21837355 - 21837299
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaa 318  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||| |||||||    
T  21837355 aggctaaagtgcactttttcccc--taactttcaaaaacttgcaattttggccccctaa 21837299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 11257621 - 11257706
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| | ||  |||||||||||| |||||||||||    |||||| || ||||||||||||||||||| ||||    
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaatttt-aaaccctaagtataaaaactacaattttggcctccta 11257706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 28617946 - 28618004
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||| ||||||||||||| |||| || |||||||||| |||||||| ||||    
T  28617946 taactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttgccccc 28618004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 1033212 - 1033284
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    ||||||||| ||||||||||| | |||||| |||| ||||||||||||| ||||||||||| |||| || |||||    
T  1033212 gctaaagtgtacttttcccccct-aacttttaaaaacttgcaattttgg-cccctaaataccaaaattataattt 1033284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 810854 - 810805
Alignment:
Q  289 tttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||| ||||||||||||| |||||   |||||||||||||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttg 810805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 8534586 - 8534665
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    |||||||| |||||||||| |||| |||||||| ||| |||||||| |||  ||| || | ||||||||||||||| ||||    
T  8534586 taaagtgctcttttccccc-ttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttggtcccc 8534665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 11437301 - 11437215
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  11437301 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggcccccta 11437215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 24422799 - 24422885
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  24422799 aggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggcccccta 24422885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 11436041 - 11436127
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |   ||| || ||||||||||||||||||||||||    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggcccccta 11436127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 52274967 - 52275053
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggccccta 52275053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 51684366 - 51684451
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||| |||||||| ||||  |||||||||||| ||||||  || ||||||||||||||||||||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggcccccta 51684451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 24426173 - 24426091
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtccccta 24426091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 35067104 - 35067018
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| |||| ||||||||  |||| ||||||| ||||||   ||||||||||||||||||||||||||    
T  35067104 aggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggcccccta 35067018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 39699867 - 39699783
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||| | ||||||||| | ||||||||||||  ||||||| |||| ||||||||||||||||||||||    
T  39699867 ggctaaagtgcacttttcccccct-aactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggcccccta 39699783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 45148581 - 45148665
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||||||||| ||||||| || |||||||||||||||| |||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgccccccta 45148665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 23980568 - 23980489
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    |||||||||||||||||||||||  ||||||| |||| |||||||||||||  |||||| ||||||||||| ||||||||    
T  23980568 aggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttgg 23980489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 37526975 - 37526896
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||||  ||||||||| | |||| ||||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccc 37526896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 14999284 - 14999361
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||| ||||||||||| | ||||||||||| ||||||||||||  ||||||| |||||||||||||||||||    
T  14999284 aggctaaagtgtacttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 39222575 - 39222501
Alignment:
Q  261 ggctaaagtgcactttt-cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaat 334  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||| || ||||||||||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaat 39222501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 51685867 - 51685781
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  ||||||||||||  |||| ||||||| || |||  ||||||||||||||||||| |||||||    
T  51685867 aggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgacccccta 51685781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 36614005 - 36613920
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||| |||||| ||  ||||||| |||| |||| |||||||| ||||||| ||||||||||||||||||| |||||||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgacccccta 36613920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 39698562 - 39698643
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcc 341  Q
    ||||||||||||||||| ||||| |||||||| |||| ||| ||||||||| ||||||| |||| |||||| ||||||||||    
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggcc 39698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 41364829 - 41364913
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||||||| ||||||||||| ||||| ||||||| | |||||||    
T  41364829 ggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagccccccta 41364913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 45150068 - 45149989
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||| |||||    
T  45150068 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgcccccc 45149989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 52827346 - 52827422
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| |||||||    
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 52827422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 11190384 - 11190462
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||||||| ||| |||| ||| ||||  ||||||||||||| ||||| ||||||||||| ||||||||    
T  11190384 aggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaattttg 11190462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 12390083 - 12389997
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| ||||||| | |||||||||||||  |||| |||||| |||||||  |||||||| || |||||||||||||||    
T  12390083 aggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggcccccta 12389997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 39153214 - 39153140
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||||| |||| |||| |||||||| ||||||||||||| ||| ||  |||||||||||||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 39153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 44404441 - 44404527
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||| ||||||||| |||   |||||||||||| || |||||||| | ||||||| ||||||||||| |||||||||||||||    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggcccccta 44404527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 45157310 - 45157233
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||||| ||||| | || |||||||| ||||||||||||| ||||||  |||||||||||||||||||    
T  45157310 aggctaaagtgcactttccccccct-aagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 45157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 35594216 - 35594298
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||| | ||||||| ||  ||||||||||||||| ||||    
T  35594216 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttt-gacccctaagtattaaaactacaattttgacccc 35594298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 7674527 - 7674603
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||| |||||||||| | |||||| |||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  7674527 aggctaaagtgcccttttcccccct-aacttttaaaaacttgcaattttgggccc-taagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 33088719 - 33088641
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||||||||| |  |||| ||||||| ||||||||||||  ||  ||| |||||||||||||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttg 33088641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 36612852 - 36612937
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||||||||   | ||| ||||||||||||||||||  |||||||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttgg-atcttaagtacaaaaactacaattttaacccccta 36612937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 39151934 - 39152008
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||| |||| |||| |||| |||||||| |||| |||||||| ||||||  |||||||||||||||||||    
T  39151934 taaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttg 39152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 43378810 - 43378737
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||| | | ||||||||||||| ||| |||||||| |||||||| |||||||| ||||||||||    
T  43378810 taaagtgcacttttctctc-ttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttg 43378737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 50680335 - 50680416
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||| ||||||||| ||||||| ||||| ||||||||||||| ||||||| || |||||||| |||||| | ||||||    
T  50680335 taaagtgcatttttccccc-ttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtccccta 50680416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 50681705 - 50681627
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    |||||||||||||||||||||  |||| |||||||| |||||||||||||  | |||| || |||||||||||| ||||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattgg 50681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 52828168 - 52828086
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||  |||||| ||| ||||| ||||||| | |||||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagccccccta 52828086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 43060108 - 43060025
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||| ||||| |||||  ||||||||||||  ||| |||||||  ||| ||| ||||||||||||||||||| ||||    
T  43060108 aggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgacccc 43060025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 15000057 - 14999983
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaat 334  Q
    |||||||||| ||||||| || |  ||||||| |||| |||||||||||| |||||||| ||||||| |||||||    
T  15000057 aggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 337
Target Start/End: Original strand, 16290092 - 16290170
Alignment:
Q  260 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    ||||||||||||| |||| |||||| |||| |||||||  |||||||||||||||| ||  || |||||||||||||||    
T  16290092 aggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaatttt 16290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 43058789 - 43058866
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccc 342  Q
    |||||| ||||||| |||| | |||||| |||| ||||||||||||  ||||||| |||||||||||||||||| ||||    
T  43058789 taaagtacactttttccccct-aactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccc 43058866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 44412030 - 44411991
Alignment:
Q  298 cttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  44412030 cttgcaattttagtcccctaagtacaaaaactacaatttt 44411991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 7675560 - 7675475
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||| ||||| || || ||||||||||||| ||||||||||||  | ||||| || ||||| || ||||||| |||||||    
T  7675560 aggctaaagtgtacttt-ccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgacccccta 7675475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 7983053 - 7983134
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||| ||| | ||||||||| | ||||||||||||| ||||||  ||  ||||| ||||||||| |||||||    
T  7983053 taaagtgcacttttctcccgt-aactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgccccccta 7983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 52276261 - 52276195
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaacta 330  Q
    ||||||||||||| ||||   ||||||||||||  ||| |||||||| ||||||| |||||||||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaacta 52276195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 35595295 - 35595210
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaacctt-gcaattttggtcccctaaatacaaaaact-acaattttggcccc 343  Q
    ||||||||||| |||||||||||  ||||||| |||| ||| |||||||||  ||||||  || ||||||| ||||||||||||||    
T  35595295 aggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccc 35595210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 33088091 - 33088143
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    |||||||||||| |||| ||||||  || |||||||| |||||||||||||||    
T  33088091 taactttcaaaaacttgtaatttttatctcctaaatataaaaactacaatttt 33088143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 39221357 - 39221405
Alignment:
Q  260 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattt 307  Q
    |||||||| |||||||||||||| | |||||||||||| ||||||||||    
T  39221357 aggctaaattgcacttttcccccctctaactttcaaaaacttgcaattt 39221405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 41366232 - 41366184
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaatttt 308  Q
    ||||||||||||||||||||||   |||||||||||| | |||||||||    
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaatttt 41366184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 29931225 - 29931311
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  29931225 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggcccccta 29931311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 29980379 - 29980465
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  29980379 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggcccccta 29980465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 54540892 - 54540806
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||| ||| |||||||||||||||||||||||||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggcccccta 54540806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 8456479 - 8456562
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||| |||| | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccct-aattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 8456562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 350
Target Start/End: Original strand, 12700174 - 12700262
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  12700174 aggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgat 12700262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 7267647 - 7267728
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  7267647 taaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggcccccta 7267728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 7758401 - 7758487
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||| ||||||||    
T  7758401 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgcccccta 7758487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 29932800 - 29932718
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  29932800 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgacccc 29932718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 29981954 - 29981872
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  29981954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgacccc 29981872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 54539754 - 54539832
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||   |||||||||||||||||||||||||||    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttg 54539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 55192096 - 55192014
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||| | ||||||||| ||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||||    
T  55192096 aggctaaagtgta-ttttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccc 55192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 12703601 - 12703512
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    |||||||||||||||||| |||  | |||||||||||  ||| |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12703601 aggctaaagtgcactttttccctct-aactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgat 12703512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 19984848 - 19984926
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||||| ||||||  |||||||||||||||||||    
T  19984848 aggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 19984926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 22776914 - 22776828
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| ||  ||||||||| ||  |||||||||||| ||||||  |||||||||||||||||||||||||||    
T  22776914 aggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggcccccta 22776828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 47614185 - 47614270
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| |||||||||||||||||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggcccccta 47614270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 53614818 - 53614902
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||| |||||| || ||||||||||||| ||| ||||||| |||| ||| ||| ||||||||||||||||||||||    
T  53614818 aggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccccc 53614902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 534498 - 534584
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| ||||  ||||| |||||| ||||||||||||  | ||||  |||||||||||||||||||||||||||    
T  534498 aggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggcccccta 534584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 47610678 - 47610596
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 47610596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 47615650 - 47615592
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaa 318  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  47615650 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaa 47615592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 24516459 - 24516542
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||| ||||||||||||| ||||  ||||||| |||| |||||||||||||  |||||| || |||||||||||||||||||||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggcccc 24516542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 350
Target Start/End: Complemental strand, 40426877 - 40426790
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaa-atacaaaaactacaattttggccccctatgat 350  Q
    ||||||||||||||||||| |||||||| ||||  |||||| ||| | ||||| | ||||||||| ||||||||||||||||||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgat 40426790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 7268924 - 7268843
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| | ||||| || | ||||||||||||||||| ||||    
T  7268924 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctccta 7268843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 11671442 - 11671353
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    |||||||||||||||||| || | | ||||||||||| ||||||||||| | |||||||||| ||||||||||  |||| |||||||||||    
T  11671442 aggctaaagtgcactttttccgcct-aactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgat 11671353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 5001199 - 5001275
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||| ||  || ||||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  5001199 aggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 28262192 - 28262279
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  28262192 aggctaaagtgcacttttccccc-ctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 28262279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 28263213 - 28263125
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  ||||||| ||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  28263213 aggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 28263125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 47609696 - 47609772
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||| ||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| |||||||    
T  47609696 aggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 47609772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 52276303 - 52276391
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  52276303 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaattttggccccctatg 52276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 52281649 - 52281561
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  52281649 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 52281561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 51038892 - 51038813
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    |||||||||||||||||||| || |||||||| ||||  |||||||||||  ||||||   |||||||||||||||||||    
T  51038892 aggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttgg 51038813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 51469972 - 51470047
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||| |  ||| |||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 51470047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 5029784 - 5029699
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| | | ||||||||| ||||||||||||| | ||||| ||| ||||| ||||||||  |||||||    
T  5029784 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttccccccta 5029699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 535883 - 535798
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||| |||||||| ||  |||||||||||| ||||||||||||||||| ||| ||  ||||||| ||||||  |||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcacccccta 535798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 18442629 - 18442718
Alignment:
Q  260 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    ||||||||||||||||| |||||   ||||||||||||| |||| ||||||| |||| |  ||  |||||||||||||||||||||||||    
T  18442629 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatg 18442718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 19487703 - 19487792
Alignment:
Q  260 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    ||||||||||||||||| |||||   ||||||||||||| |||| ||||||| |||| |  ||  |||||||||||||||||||||||||    
T  19487703 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatg 19487792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 19986174 - 19986094
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcc--cctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||  ||||  || ||||||||||||||||    
T  19986174 aggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttg 19986094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 51037536 - 51037620
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| ||| |||||||||||||  |||||||||||  || |||   ||||||||||||||||| ||||||||    
T  51037536 ggctaaagtgcacttttctccc-ttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagcccccta 51037620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 52840705 - 52840620
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||| ||||||| ||  |||||||||||| |||||||||||||  |||||| ||  ||||| ||||||||| |||||||    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtcccccta 52840620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 348
Target Start/End: Complemental strand, 18456165 - 18456077
Alignment:
Q  261 ggctaaagtgcacttttc-ccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||| ||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  18456165 ggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 18456077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 46719941 - 46720017
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    |||||||||||| ||||||||| |||||||| ||||  |||| ||||||| ||||||  || |||||||||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaatttt 46720017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 51470556 - 51470481
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    ||||||||||||||| ||||||| | ||||||||||| |||||||||| | |||||||| ||| ||||| |||||||    
T  51470556 aggctaaagtgcactcttcccccct-aactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaattt 51470481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 34019241 - 34019161
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||| || ||||||||  ||||||||||||| ||||||||||||  ||||||  |||||| ||||||||||||| ||||||    
T  34019241 taaagtacatttttcccc--ttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtccccta 34019161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 8875905 - 8875991
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| ||| |||| ||  ||||   ||||||||| | ||| ||  |||||||||||||||||||||||||||    
T  8875905 aggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggcccccta 8875991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 23770505 - 23770423
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||| ||||| ||| |||| ||| ||||  || ||||||||||||| ||  |||||||||||||||||| ||||||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagcccccta 23770423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 53901487 - 53901404
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  ||| ||| ||||  |||||||||||   || ||| ||||||||||||||| |||||||||||    
T  53901487 ggctaaagtgcacttttccccc--taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggcccccta 53901404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 6170296 - 6170348
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    |||||||||||| |||||||||||| |||| ||| |||||||| |||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 6249633 - 6249685
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    |||||||||||| |||||||||||  |||| ||| ||||||||||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttt 6249685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 23769856 - 23769939
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||| |||||||||||||| || ||||||||||| |  ||||||||||  ||| |||  | ||||||||||||||||| ||||    
T  23769856 aggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaattttgacccc 23769939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 46721322 - 46721236
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| |||  ||||||| ||||  |||| |||||   ||||||  |||||||||||||||||| | ||||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtccccta 46721236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 49216247 - 49216321
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 335  Q
    ||||||||||||||||||| |   ||| ||||||||  |||||||||||  ||||||  ||||||||||||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 31645000 - 31645049
Alignment:
Q  288 ctttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    ||||||||| ||| ||||||||| ||||||| | ||||||||||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaatttt 31645049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 52104484 - 52104562
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||| ||||||||||||||  ||||||||||||  ||| |||||||||||  ||  ||||||||||| |||||||||| ||||    
T  52104484 taaaatgcacttttccccc--taactttcaaaaagttgtaattttggtcc--tatgtacaaaaactataattttggccaccta 52104562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 17469 - 17553
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    |||||||||||||||||| |||| |||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  17469 aggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccc 17553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 18877 - 18795
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||| |||   ||||||| ||||  |||||||||||||||||||  ||||||||||| ||||||||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggcccc 18795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 1824174 - 1824094
Alignment:
Q  266 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||| |||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggcccccta 1824094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 1858619 - 1858539
Alignment:
Q  266 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||| |||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggcccccta 1858539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 350
Target Start/End: Complemental strand, 18979220 - 18979132
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    |||||||||||||||||||||  |||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgat 18979132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 10007865 - 10007779
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| || | |||| |||||||||| ||||||    
T  10007865 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtccccta 10007779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 12353461 - 12353377
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  12353461 aggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggcccccta 12353377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 10006344 - 10006429
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| |||||||||||||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggcccccta 10006429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 5513981 - 5514066
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||| |||| | ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||| |||||||    
T  5513981 aggctaaagtgcacttttaccccct-aactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgccccccta 5514066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 12351920 - 12352006
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| ||| ||||| |||||||||||||  |||||||||||  ||||||| ||||||||||||||||||| |||||||    
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgacccccta 12352006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 29968434 - 29968353
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  29968434 taaagtgcacttttccccc-ttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtccccta 29968353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 40471244 - 40471166
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||||| |||||||| |||| ||| |||||||||| || |||||||||||||||||||||| |||||    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggt-ccataaatacaaaaactacaattttagcccc 40471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 22221466 - 22221380
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 22221380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 22227808 - 22227722
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 22227722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 18978029 - 18978101
Alignment:
Q  270 gcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||| | ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  18978029 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggcccc 18978101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 22220388 - 22220473
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  ||||||| |||  ||||||||||||  ||||||  || ||||||||||||||||||||||||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggcccccta 22220473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 38980146 - 38980058
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 38980058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 39011243 - 39011155
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 39011155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 38974795 - 38974882
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 38974882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 39005893 - 39005980
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 39005980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 1823551 - 1823637
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||| |||||| |||| |||||||| |||| ||||||||||||  || |||| ||||||||||||||||| || ||||||    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtccccta 1823637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 1857996 - 1858082
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||| |||||| |||| |||||||| |||| ||||||||||||  || |||| ||||||||||||||||| || ||||||    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtccccta 1858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 8389787 - 8389705
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||  |||| ||||||||  |||||||||||||||| ||  |||||||||||||||||| | ||||||    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtccccta 8389705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 11282011 - 11282093
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||| |||| |||||||| ||||  |||||||||||| |||||| |||||||||  ||||||||| |||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgacccccta 11282093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 11287779 - 11287861
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||| | ||  ||||||| |||| ||||||||||||| || |||| |||| ||||||||||||||||||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggcccccta 11287861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 32207425 - 32207346
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcc 341  Q
    ||||||||||||||||| |||||  |||| ||||||| ||||||||||||   |||||| ||||||||||||||||||||||    
T  32207425 aggctaaagtgcactttcccccc--taaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcc 32207346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 43661925 - 43661839
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||| |||||||||||||| || |||||||||||||  ||||||||||  ||| |||  ||||||||||| |||||||||||||||    
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggcccccta 43661839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 18970920 - 18970992
Alignment:
Q  270 gcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||| | ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||| ||||    
T  18970920 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccc 18970992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 45114618 - 45114537
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcc 341  Q
    ||||| |||||||||||||| ||  |||||||||||| |||||||||||||| | |||  |||| |||||||||||||||||    
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcc 45114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 32968455 - 32968543
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| ||||||||||||| |||||    
T  32968455 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatg 32968543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 8388463 - 8388547
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| |||||  ||||||| ||||  |||||||||| | ||||||  ||||||||||| |||||||||||||||    
T  8388463 aggctaaagtgcactttcccccc--taacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggcccccta 8388547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 30335638 - 30335724
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| |||||| || |||||||| |||| |||||||||||||  | |||| |||||||| |||||||||  |||||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaacccccta 30335724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 18488325 - 18488273
Alignment:
Q  299 ttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgata 351  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||| ||||    
T  18488325 ttgcaattttagtcccctatatacaaaaactacaattttggccctctaagata 18488273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 348
Target Start/End: Complemental strand, 32974037 - 32973950
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    ||||||||||||||||| ||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| ||||||||||||| |||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatg 32973950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 42982759 - 42982676
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||| || |||| ||| ||||  ||| |||||||| |||||  | |||||||||||||||||| ||||    
T  42982759 aggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaattttgacccc 42982676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 43661267 - 43661350
Alignment:
Q  263 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||  || |||| ||| ||||  || ||||||||||||| ||  ||||||||||| |||||||||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggcccccta 43661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 24122882 - 24122967
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| ||||||||| | |||||| ||||  |||||||||||  ||||||| ||||||||||| |||||| | ||||||    
T  24122882 aggctaaagtgcatttttcccccct-aactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtccccta 24122967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 24483143 - 24483201
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaa 319  Q
    |||||||||||||||||||||   ||| |||||||| ||||||||||||| ||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaaa 24483201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 24488756 - 24488703
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||| ||||||||||||| ||||||||||  ||||| |||||||||    
T  24488756 taactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttg 24488703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 36249552 - 36249601
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttgg 310  Q
    |||||||||||||||||||||| |||| ||||||||  ||||||||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttgg 36249601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 30336602 - 30336526
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    ||||||||||||||| | ||||  |||||||||||| |||  |||||| | | ||||| ||||||||||||||||||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaatttt 30336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaa 327  Q
    |||||||||||| ||| |||||  ||| |||||||| |||||||||||| |||||||| ||||||||    
T  23170098 ggctaaagtgcattttcccccc--taattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 5514371 - 5514294
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||||||  ||| | || ||| |||| ||||||||||| | |  ||||||||||||||||||||||||    
T  5514371 aggctaaagtgcacttttatcccct-aattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg 5514294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 5003198 - 5003116
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatac-aaaaactacaattttggcccc 343  Q
    ||||||||| ||||||| |||||  |||||||||||| |||||||||||   ||||||| ||| |||||| ||||||||| ||||    
T  5003198 aggctaaagcgcactttcccccc--taactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttgtcccc 5003116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 11283310 - 11283225
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||| ||| ||||| |||||||||||||  ||| |||||| | ||||||  || |||||  |||||||||| ||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtccccta 11283225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 11456637 - 11456694
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtccccta 317  Q
    ||||||||||||||||||| |||  ||| ||||||||  |||||||||||| ||||||    
T  11456637 aggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 11288962 - 11288914
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaatttt 308  Q
    |||||||||||||||||| | ||  |||||||||||| |||||||||||    
T  11288962 aggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 22630554 - 22630468
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||| |  |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  22630554 aggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagcccccta 22630468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 18371424 - 18371509
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||   |||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggcccccta 18371509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 7501954 - 7501871
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| ||||||||||||||    
T  7501954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggcccc 7501871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 7500454 - 7500539
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||| || | |||| |||||||||||||||||    
T  7500454 aggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggcccccta 7500539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 17782655 - 17782569
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  17782655 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 17782569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 31659622 - 31659708
Alignment:
Q  261 ggctaaagtgcactttt-cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| |||||  |||||||||||| ||| ||||||||  ||||||| |||||||||||||||||||||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggcccccta 31659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 127336 - 127411
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||| ||||| |||||||    
T  127336 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaattt 127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 3227696 - 3227620
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  3227696 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 31949904 - 31949828
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    ||||||||||||||| |||||||  |||||||||||| ||||||||||||| ||||||||||| ||||| |||||||    
T  31949904 aggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt 31949828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 11658378 - 11658457
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 339  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||| | ||||||  ||||||||||||||||||||    
T  11658378 aggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttgg 11658457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 42886384 - 42886302
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||| ||   ||||||||||||  |||||||||||  |||||||||||||||||||||||||| ||||||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagcccccta 42886302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 18372530 - 18372473
Alignment:
Q  289 tttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  18372530 tttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggcccccta 18372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 14999249 - 14999171
Alignment:
Q  266 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| | || ||||||||| |||||||||||  ||||||||||||||||||||||||||||| |||||    
T  14999249 aagtgcacttttcccccct-aattttcaaaac-ttgcaattttgaccccctaaatacaaaaactacaattttggcgcccta 14999171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 21505415 - 21505496
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||||||  ||||||||||||  |||| ||||||| |||| | |||||||||||||||||||| ||||    
T  21505415 aggctaaagtgcacttttccccc--taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgacccc 21505496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 22629482 - 22629571
Alignment:
Q  260 aggctaaagtgcacttttccccca---ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||| |||||||||    |||| |||||||| |||| |||||||| | ||||| |||||||||||||||||||||||||||    
T  22629482 aggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggcccccta 22629571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 31949321 - 31949407
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||| |  ||| |||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  31949321 aggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 31949407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 17781663 - 17781736
Alignment:
Q  263 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| |||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 17781736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 47525468 - 47525383
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||| | ||||||| ||  ||||| ||||||| | |||||||    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagccccccta 47525383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 11662649 - 11662569
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| |  | |||  ||||||||||| |||||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccc 11662569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 34174084 - 34174010
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 335  Q
    ||||||||||||||||||||||| | | ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||    
T  34174084 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  268 gtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 335  Q
    |||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 333
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaa 333  Q
    |||||||||||||||| ||| ||  |||||||||||| |||||||||||||  |||||  ||||||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 128699 - 128617
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| |  ||||||||||||  |||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 128617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 3227109 - 3227182
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    ||||||||||||||| ||||| | || |||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  3227109 gctaaagtgcactttccccccct-aattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 342
Target Start/End: Complemental strand, 34352888 - 34352806
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccc 342  Q
    |||||||||||||||||| | ||  ||| |||||||| ||| | ||||||||||| ||| |||| |||||| |||||||||||    
T  34352888 aggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccc 34352806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 48935004 - 48934927
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||| |||||| ||  |||||||||||| |||| |||||||  || |||| ||||||||||| |||||||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttg 48934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 43899469 - 43899525
Alignment:
Q  284 ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggc 340  Q
    ||||||||||||| |||||||||||| ||  ||||||| ||||| ||||||||||||    
T  43899469 ttaactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttggc 43899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 47369780 - 47369863
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||| |||||||||   ||  |||||||||||| ||||||||||| | | | ||| ||||||||||| ||||||||||||    
T  47369780 aggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggcccc 47369863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 15681594 - 15681651
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtccccta 317  Q
    ||||||||||| ||||||| |||||||| ||| ||||  |||| ||||||||||||||    
T  15681594 aggctaaagtgaacttttcacccattaagttttaaaaagttgcgattttggtccccta 15681651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 345
Target Start/End: Original strand, 769413 - 769497
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccct 345  Q
    |||||||||||| |||||| ||  ||| |||||||| ||||||||||||    ||||| |||||||| || ||||||||| ||||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctccct 769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 350
Target Start/End: Complemental strand, 61559 - 61471
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    |||||||||||||||||| || |||| |||||||| ||||||||||| | ||||||| ||||||||||| |||||||||||||||||||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgat 61471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 60090 - 60179
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatgat 350  Q
    ||||||||||||||||||| ||  ||||||| |||| ||||||||||||  ||||||  || |||||||||||||||| |||||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgat 60179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 7316396 - 7316313
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||   |||| ||||||||||||||    
T  7316396 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggcccc 7316313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 16704599 - 16704521
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||    
T  16704599 aggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 16704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 8659264 - 8659350
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  8659264 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 8659350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 8821872 - 8821958
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  8821872 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 8821958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 14822359 - 14822445
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||| |||||||||||| ||| |||| |||||||| ||||||||||||| ||| ||| || | ||||||||||||||||||||||    
T  14822359 aggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggcccccta 14822445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 16703570 - 16703652
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  || ||||||||| |||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  16703570 ggctaaagtgcacttttccccc--tatctttcaaaaacttgcaattttgatcca-taaatacaaaaactacaattttagcccccta 16703652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 27437827 - 27437913
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| ||| |||||||| ||||  |||||||||||| |||||| | | |||||||||||||||| |||||||    
T  27437827 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgacccccta 27437913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 7314880 - 7314964
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| ||||||||| |||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtatcaaaacaacaattttgacccccta 7314964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 8822894 - 8822809
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 8822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 10784591 - 10784676
Alignment:
Q  260 aggctaaagtgcacttttccc-ccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    ||||||||||||||||||||| || |||||||| |||| |||||||||||   ||||||| || ||||||||||||||||||||||    
T  10784591 aggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggccccc 10784676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 1829701 - 1829619
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||  |||  ||||||| |||| ||||||||||||  ||||||| || ||||||||||||||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggcccccta 1829619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 27322169 - 27322084
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| | | ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||||  |||||||    
T  27322169 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccccta 27322084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 6842385 - 6842308
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    |||||||||||||||||||||||  ||| ||||||||  |||||||||||| ||||||  | ||||||||||||||||    
T  6842385 aggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 3721611 - 3721679
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaac 328  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| |||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaac 3721679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 14823678 - 14823591
Alignment:
Q  260 aggctaaagtgcacttttc-ccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||  |||| |||| ||| |||| ||||||||||| | ||| ||| |||| ||||||||||||||||||||||    
T  14823678 aggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggcccccta 14823591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 8660305 - 8660220
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||||| | ||||||| ||| ||||| ||||||| | |||||||    
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaatttt-gacccctaagtaccaaaaccacaatttagccccccta 8660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 26575131 - 26575070
Alignment:
Q  285 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||| |||||||||||   ||| ||| |||||||||||||||||||||||||||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggcccccta 26575070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 3722609 - 3722533
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    ||||||||||||||||||||| |  |||||||||||| ||||||||||||  || |||| ||| ||||| |||||||    
T  3722609 aggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 27318314 - 27318389
Alignment:
Q  260 aggctaaagtgcac-ttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 336  Q
    |||||||||||||| |||||||||  || ||||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  27318314 aggctaaagtgcaccttttccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 34834677 - 34834595
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||| |  |||||||||||| |||||||||||| || ||||| ||  ||||| ||||||| | |||||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagccccccta 34834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 26574618 - 26574690
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactaca 332  Q
    ||||||||||||| ||| || ||  |||||||||||| ||||||||||||  || |||| |||||||||||||    
T  26574618 aggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactaca 26574690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 29473082 - 29473158
Alignment:
Q  266 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccc 342  Q
    ||||||||||||||||| |||| ||| ||||  ||||||||||||| |||||   |||||||  |||||||||||||    
T  29473082 aagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccc 29473158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 6840193 - 6840269
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||| ||||||||||| ||||  |||| ||||||||  |||| ||||||| ||| ||||||||||||||| |||||||    
T  6840193 aggctgaagtgcactttccccc--ttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttg 6840269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 30495797 - 30495717
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    ||||||||||||||||| ||||  ||||||||||||  |||| |||||  |||||||  ||||||||  ||||||||||||||    
T  30495797 ggctaaagtgcactttttcccc--taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccc 30495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 26717183 - 26717137
Alignment:
Q  263 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttg 309  Q
    |||||||||||||||||||| |||| ||||| || ||||||||||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttg 26717137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 3333128 - 3333051
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    |||||||| |||||||||||||   ||| ||| ||||  |||| ||||||| ||||||  ||||||||||||||||||    
T  3333128 aggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaatttt 3333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 19487 - 19565
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  19487 aggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttg 19565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 233 - 318
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||| ||||| |||||||||||||  |||||||||||||||||||  ||||||||||| |||||||| ||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtccccta 318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 1056 - 996
Alignment:
Q  284 ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 344  Q
    |||||||| ||||  |||||||||||||||| ||  ||||||||||| |||||||||||||    
T  1056 ttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccc 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 5540 - 5457
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 343  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||||  ||| ||| ||||||||||||||||||| ||||    
T  5540 aggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgccccc 5457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 4441 - 4527
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||| ||| ||||  ||| |||||||| ||| ||||||| | ||| ||| |||||||| |||||||||  |||||||    
T  4441 aggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttaccccccta 4527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 49535 - 49449
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||| ||| |||||||| ||||  |||||||||||| |||||| | | |||||||||||||||| |||||||    
T  49535 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgacccccta 49449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 348
Target Start/End: Complemental strand, 220 - 133
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 348  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 2564 - 2481
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaac-cttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||  ||||||| ||||||||| || ||||||||||||||    
T  2564 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggcccccta 2481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 7187 - 7104
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaac-cttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||  ||||||| ||||||||| || ||||||||||||||    
T  7187 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggcccccta 7104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 1438 - 1524
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||| |||||||||||  ||||||| |||| ||||||||||||  ||||||  || |||||||| ||||||| |||||||    
T  1438 aggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgacccccta 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 3409 - 3324
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| ||||||||  ||| ||  ||||||||||| |||||||| ||||||    
T  3409 aggctaaagtgcacttttcccccctta-ctttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtccccta 3324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 4829 - 4754
Alignment:
Q  262 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 338  Q
    ||||||||||||||| || || | |||||| |||| | ||||||||||| |||||||||||| ||||||||||||||    
T  4829 gctaaagtgcactttccctccct-aacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttg 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 337  Q
    ||||||| ||||||||||| || |||||||| |||| ||||||||||||| | ||||| ||  ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 37148 - 37232
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaacctt-gcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    ||||||||||||||||||||||  || |||| ||||  || |||||||||  ||||||| ||||||||| |||||||||||||||||    
T  37148 ggctaaagtgcacttttccccc--tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggcccccta 37232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 6346 - 6428
Alignment:
Q  264 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 346  Q
    |||||||||||||||| || |||| ||||||||  || | ||||| | ||||||  ||||||||||||||||||| |||||||    
T  6346 taaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgacccccta 6428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 23081 - 23152
Alignment:
Q  261 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaat 334  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||  || |||| ||| ||||| |||||    
T  23081 ggctaaagtgcacttttccccc--taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaat 23152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 23992 - 23931
Alignment:
Q  260 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaata 321  Q
    ||||||||||||||||||  | |  |||||||||||| |||||||||||||  |||||||||    
T  23992 aggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaata 23931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University