View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1348_low_55 (Length: 350)
Name: NF1348_low_55
Description: NF1348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1348_low_55 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 82 - 257
Target Start/End: Original strand, 28321745 - 28321921
Alignment:
| Q |
82 |
ccacagaaggaaagtgtggaaaaaaccctaagaagatagtgt-gtgcatcaaataatcattttcaataaaaatttaatgttaacatgcaccttgtggaga |
180 |
Q |
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| T |
28321745 |
ccacagaaggaaagtgtggaaaaaaccctaagaagatagtgttgtgcatcaaataatcattttcaataaaaatttaatgttaacatgcaccttgtggaga |
28321844 |
T |
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| Q |
181 |
aaaaatgatgtctcccctactgcaatggtaacatcacttgtaagtccagttgtacaaaccctgtagcaagataaaat |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28321845 |
aaaaatgatgtctcccctactgcaatggtaacatcacttgtaagtccagttgtacaaaccctgtagcaagataaaat |
28321921 |
T |
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