View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1348_low_70 (Length: 294)
Name: NF1348_low_70
Description: NF1348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1348_low_70 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 72 - 240
Target Start/End: Original strand, 32528454 - 32528622
Alignment:
| Q |
72 |
tttttctctaatgaaagtctttcattggatgaagtttctattgggtaaaagattccctattgaaaatgcatgctctaattcacgtcatcatttcattcat |
171 |
Q |
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||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
32528454 |
tttttctctaatgaaagtcttgaataggatgaagtttctattgggtaaaagattccctattgaaaatgcatgctctaattcacgtcatcatttcatttat |
32528553 |
T |
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| Q |
172 |
gcatactcatttttccaataaataacagcttagttgaattacttgaagtaattcattccacgattctgt |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32528554 |
gcatactcatttttccaataaataacagcttagttgaattacttgaagtaattcattccacgattctgt |
32528622 |
T |
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