View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1348_low_79 (Length: 266)

Name: NF1348_low_79
Description: NF1348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1348_low_79
NF1348_low_79
[»] chr8 (36 HSPs)
chr8 (26-221)||(1261693-1261888)
chr8 (26-202)||(26288053-26288229)
chr8 (26-202)||(26301310-26301486)
chr8 (26-202)||(26313304-26313480)
chr8 (26-221)||(18852903-18853100)
chr8 (26-221)||(18870297-18870494)
chr8 (26-221)||(33037544-33037740)
chr8 (26-221)||(30655810-30656006)
chr8 (26-218)||(4759813-4760008)
chr8 (26-221)||(36979541-36979737)
chr8 (26-219)||(10688878-10689075)
chr8 (26-154)||(31071035-31071163)
chr8 (57-193)||(7412532-7412666)
chr8 (31-193)||(4456195-4456354)
chr8 (26-221)||(6311460-6311658)
chr8 (42-190)||(19175528-19175674)
chr8 (68-193)||(4696379-4696502)
chr8 (68-193)||(5702251-5702374)
chr8 (68-193)||(23799347-23799470)
chr8 (94-221)||(7289705-7289831)
chr8 (68-195)||(19752163-19752288)
chr8 (68-198)||(26402991-26403123)
chr8 (68-193)||(3051323-3051447)
chr8 (69-193)||(28307766-28307889)
chr8 (68-195)||(9054188-9054314)
chr8 (68-157)||(6127426-6127515)
chr8 (77-193)||(5990333-5990446)
chr8 (94-156)||(25327996-25328058)
chr8 (94-156)||(25328122-25328184)
chr8 (68-158)||(7492979-7493067)
chr8 (94-197)||(9765617-9765720)
chr8 (95-138)||(39784685-39784728)
chr8 (94-193)||(4731532-4731629)
chr8 (75-197)||(13204558-13204670)
chr8 (117-193)||(41266841-41266918)
chr8 (94-193)||(43036297-43036394)
[»] scaffold0188 (2 HSPs)
scaffold0188 (26-219)||(17693-17886)
scaffold0188 (26-219)||(23786-23979)
[»] chr7 (37 HSPs)
chr7 (26-219)||(21639971-21640164)
chr7 (26-210)||(21646169-21646353)
chr7 (26-218)||(1533183-1533376)
chr7 (26-219)||(18413802-18413994)
chr7 (26-219)||(18408926-18409118)
chr7 (26-220)||(20357285-20357480)
chr7 (26-211)||(2058130-2058318)
chr7 (57-193)||(2479528-2479662)
chr7 (68-199)||(46516070-46516199)
chr7 (28-190)||(21989072-21989231)
chr7 (68-193)||(20284292-20284415)
chr7 (68-193)||(23402784-23402907)
chr7 (31-193)||(47263833-47263992)
chr7 (68-195)||(2647466-2647591)
chr7 (68-190)||(4796443-4796562)
chr7 (72-193)||(44847896-44848015)
chr7 (68-195)||(2580593-2580717)
chr7 (68-195)||(9189775-9189901)
chr7 (68-195)||(9184943-9185068)
chr7 (68-193)||(3047457-3047581)
chr7 (96-211)||(4873310-4873424)
chr7 (68-193)||(33332221-33332344)
chr7 (68-197)||(5817036-5817164)
chr7 (94-199)||(12397091-12397195)
chr7 (68-200)||(29160008-29160141)
chr7 (94-193)||(31109389-31109489)
chr7 (94-199)||(24024128-24024232)
chr7 (96-156)||(12406513-12406573)
chr7 (94-193)||(49091918-49092015)
chr7 (28-115)||(21983450-21983536)
chr7 (119-193)||(79640-79714)
chr7 (42-128)||(35960993-35961078)
chr7 (68-128)||(49091866-49091924)
chr7 (68-111)||(56152-56195)
chr7 (68-148)||(9235398-9235476)
chr7 (153-190)||(21983541-21983578)
chr7 (94-173)||(38671419-38671495)
[»] chr5 (33 HSPs)
chr5 (26-211)||(35387825-35388010)
chr5 (26-219)||(38219561-38219754)
chr5 (26-220)||(24136011-24136206)
chr5 (26-205)||(31180377-31180557)
chr5 (31-193)||(15464700-15464860)
chr5 (31-193)||(36932119-36932279)
chr5 (41-193)||(9353103-9353253)
chr5 (30-193)||(14520396-14520556)
chr5 (68-195)||(28832460-28832585)
chr5 (57-190)||(11916746-11916877)
chr5 (63-195)||(31300364-31300494)
chr5 (68-195)||(24553296-24553421)
chr5 (68-193)||(11181603-11181726)
chr5 (68-193)||(17003730-17003853)
chr5 (26-184)||(30631570-30631730)
chr5 (68-195)||(42127139-42127264)
chr5 (94-210)||(1456952-1457067)
chr5 (68-197)||(10281955-10282085)
chr5 (69-190)||(12083951-12084071)
chr5 (94-199)||(27445150-27445254)
chr5 (94-199)||(27449994-27450098)
chr5 (94-199)||(43592459-43592563)
chr5 (94-199)||(43598904-43599008)
chr5 (94-199)||(43604396-43604500)
chr5 (94-199)||(43609888-43609992)
chr5 (68-179)||(7160689-7160798)
chr5 (68-173)||(19588948-19589051)
chr5 (94-184)||(15044865-15044956)
chr5 (68-198)||(3880503-3880634)
chr5 (76-175)||(33030728-33030824)
chr5 (68-103)||(42127269-42127304)
chr5 (95-138)||(28807436-28807479)
chr5 (94-193)||(13488077-13488174)
[»] chr1 (34 HSPs)
chr1 (26-211)||(24202518-24202703)
chr1 (27-219)||(19366049-19366241)
chr1 (27-219)||(19358585-19358776)
chr1 (27-219)||(19361174-19361365)
chr1 (26-221)||(24787101-24787297)
chr1 (31-193)||(13604393-13604552)
chr1 (68-195)||(47098594-47098719)
chr1 (42-190)||(3281884-3282030)
chr1 (42-190)||(21536344-21536490)
chr1 (41-193)||(37069943-37070093)
chr1 (68-195)||(47102608-47102733)
chr1 (68-191)||(29652016-29652137)
chr1 (59-195)||(32889632-32889766)
chr1 (42-193)||(26644669-26644818)
chr1 (68-193)||(13598603-13598726)
chr1 (72-195)||(27104171-27104291)
chr1 (27-116)||(19379916-19380005)
chr1 (68-195)||(9476465-9476590)
chr1 (68-197)||(40816580-40816710)
chr1 (73-197)||(47703699-47703824)
chr1 (68-192)||(19073131-19073256)
chr1 (68-192)||(19121021-19121146)
chr1 (68-191)||(22819634-22819756)
chr1 (94-184)||(41398415-41398506)
chr1 (94-153)||(41390760-41390819)
chr1 (69-193)||(9022677-9022799)
chr1 (68-136)||(16124342-16124408)
chr1 (95-138)||(1054874-1054917)
chr1 (115-197)||(17345327-17345410)
chr1 (95-138)||(25439758-25439801)
chr1 (95-138)||(25444951-25444994)
chr1 (95-138)||(39445679-39445722)
chr1 (95-138)||(44023736-44023779)
chr1 (94-173)||(197105-197181)
[»] chr4 (43 HSPs)
chr4 (27-219)||(28468279-28468471)
chr4 (26-218)||(24742104-24742298)
chr4 (30-212)||(29760810-29760993)
chr4 (26-193)||(31985404-31985569)
chr4 (57-193)||(16623064-16623198)
chr4 (31-193)||(5396442-5396601)
chr4 (57-193)||(16628643-16628777)
chr4 (68-193)||(3777752-3777875)
chr4 (68-193)||(5268971-5269094)
chr4 (68-193)||(10047584-10047707)
chr4 (57-193)||(36315001-36315135)
chr4 (57-193)||(36329210-36329344)
chr4 (68-195)||(25861802-25861927)
chr4 (57-193)||(6743186-6743320)
chr4 (42-190)||(8689270-8689416)
chr4 (28-189)||(5143424-5143582)
chr4 (68-193)||(5112440-5112564)
chr4 (69-195)||(42599344-42599467)
chr4 (26-190)||(5147840-5148001)
chr4 (58-193)||(38152208-38152342)
chr4 (68-197)||(24334014-24334144)
chr4 (68-193)||(54867385-54867505)
chr4 (94-199)||(51520637-51520741)
chr4 (68-198)||(3793843-3793974)
chr4 (94-199)||(9224208-9224312)
chr4 (94-199)||(9228995-9229099)
chr4 (68-193)||(39774075-39774199)
chr4 (94-184)||(18712581-18712671)
chr4 (94-197)||(6542378-6542480)
chr4 (94-197)||(51336933-51337035)
chr4 (68-193)||(18377562-18377679)
chr4 (69-193)||(1983070-1983194)
chr4 (94-149)||(3814202-3814257)
chr4 (72-173)||(37782070-37782170)
chr4 (95-138)||(45347678-45347721)
chr4 (115-173)||(6677362-6677420)
chr4 (95-138)||(5732844-5732887)
chr4 (95-138)||(18855906-18855949)
chr4 (95-138)||(45357158-45357201)
chr4 (94-200)||(4587823-4587929)
chr4 (94-193)||(48142916-48143013)
chr4 (94-175)||(48893839-48893920)
chr4 (94-193)||(52082854-52082951)
[»] chr3 (52 HSPs)
chr3 (27-220)||(1306112-1306305)
chr3 (26-210)||(2671333-2671519)
chr3 (26-221)||(9091037-9091234)
chr3 (28-211)||(40372542-40372727)
chr3 (26-220)||(8477528-8477724)
chr3 (26-221)||(8738799-8738996)
chr3 (27-193)||(32143485-32143649)
chr3 (26-193)||(26928359-26928524)
chr3 (26-210)||(7167408-7167595)
chr3 (27-193)||(27986216-27986380)
chr3 (26-221)||(28501429-28501630)
chr3 (26-221)||(28503596-28503797)
chr3 (31-193)||(33386435-33386595)
chr3 (27-193)||(27453122-27453284)
chr3 (31-193)||(27974712-27974871)
chr3 (57-193)||(21711414-21711548)
chr3 (42-189)||(16264526-16264671)
chr3 (68-193)||(40592542-40592665)
chr3 (57-193)||(8370249-8370383)
chr3 (57-189)||(36029285-36029415)
chr3 (42-193)||(39032315-39032463)
chr3 (68-193)||(1736064-1736187)
chr3 (57-195)||(6794473-6794609)
chr3 (68-193)||(47923664-47923787)
chr3 (73-195)||(26299196-26299316)
chr3 (68-193)||(24694926-24695049)
chr3 (57-190)||(35925670-35925803)
chr3 (61-193)||(37725871-37726001)
chr3 (68-195)||(3323449-3323574)
chr3 (68-195)||(3328115-3328240)
chr3 (68-191)||(48438419-48438539)
chr3 (68-200)||(3715752-3715885)
chr3 (68-195)||(1417249-1417374)
chr3 (68-195)||(8126833-8126958)
chr3 (68-195)||(37466498-37466623)
chr3 (68-190)||(25929159-25929278)
chr3 (82-196)||(4386733-4386846)
chr3 (68-197)||(25795983-25796113)
chr3 (84-193)||(27026925-27027032)
chr3 (84-193)||(27038270-27038377)
chr3 (94-199)||(22172996-22173100)
chr3 (68-192)||(47649773-47649898)
chr3 (97-193)||(23410529-23410624)
chr3 (84-189)||(40844874-40844977)
chr3 (94-193)||(23392106-23392204)
chr3 (68-197)||(21353765-21353898)
chr3 (68-115)||(18552721-18552768)
chr3 (68-193)||(30709557-30709672)
chr3 (86-129)||(10274603-10274646)
chr3 (95-138)||(18656614-18656657)
chr3 (94-173)||(22835199-22835275)
chr3 (94-173)||(39153558-39153634)
[»] chr6 (30 HSPs)
chr6 (26-218)||(5674509-5674702)
chr6 (26-219)||(22709171-22709364)
chr6 (31-193)||(5757249-5757408)
chr6 (68-195)||(31936778-31936903)
chr6 (57-195)||(31979704-31979840)
chr6 (57-195)||(5572012-5572148)
chr6 (59-193)||(31086245-31086377)
chr6 (68-189)||(5017271-5017390)
chr6 (68-193)||(24435743-24435865)
chr6 (68-191)||(22963902-22964023)
chr6 (68-191)||(23824370-23824491)
chr6 (94-199)||(11857154-11857258)
chr6 (94-199)||(14737378-14737482)
chr6 (94-199)||(22010498-22010602)
chr6 (68-197)||(21801108-21801238)
chr6 (94-199)||(14742238-14742342)
chr6 (31-148)||(21356204-21356318)
chr6 (118-193)||(18234334-18234409)
chr6 (57-115)||(18233038-18233096)
chr6 (128-193)||(10076962-10077027)
chr6 (115-190)||(21272763-21272838)
chr6 (69-197)||(14521877-14522007)
chr6 (68-193)||(31076706-31076830)
chr6 (57-115)||(4630145-4630203)
chr6 (143-193)||(23896628-23896678)
chr6 (68-104)||(10077026-10077062)
chr6 (95-138)||(6438680-6438723)
chr6 (95-138)||(28155432-28155475)
chr6 (94-156)||(28184684-28184749)
chr6 (69-154)||(5385799-5385881)
[»] chr2 (41 HSPs)
chr2 (26-221)||(9296138-9296334)
chr2 (26-198)||(3491913-3492085)
chr2 (26-210)||(11098674-11098860)
chr2 (26-211)||(14291652-14291839)
chr2 (76-219)||(25409842-25409985)
chr2 (26-191)||(40738995-40739158)
chr2 (31-190)||(36757536-36757692)
chr2 (41-193)||(28258948-28259098)
chr2 (68-193)||(33528395-33528518)
chr2 (68-195)||(14698778-14698903)
chr2 (68-195)||(33118338-33118463)
chr2 (68-190)||(21630148-21630268)
chr2 (68-190)||(34389054-34389174)
chr2 (68-195)||(10445236-10445361)
chr2 (42-190)||(23078245-23078391)
chr2 (68-193)||(13569532-13569655)
chr2 (26-193)||(8389920-8390084)
chr2 (68-193)||(20522425-20522548)
chr2 (68-184)||(17865408-17865522)
chr2 (68-197)||(8040267-8040397)
chr2 (68-193)||(10707023-10707146)
chr2 (68-197)||(31056246-31056376)
chr2 (68-195)||(35397712-35397839)
chr2 (68-197)||(34682097-34682227)
chr2 (68-193)||(40015128-40015251)
chr2 (68-163)||(39483136-39483229)
chr2 (69-175)||(2837816-2837923)
chr2 (72-175)||(2869481-2869582)
chr2 (94-184)||(39811803-39811894)
chr2 (26-78)||(25398658-25398710)
chr2 (26-78)||(25403796-25403848)
chr2 (26-78)||(25407785-25407837)
chr2 (73-193)||(15903660-15903779)
chr2 (73-175)||(1344333-1344435)
chr2 (115-197)||(42269617-42269702)
chr2 (84-163)||(41586351-41586429)
chr2 (95-138)||(32246968-32247011)
chr2 (42-173)||(3278176-3278307)
chr2 (94-193)||(39284759-39284856)
chr2 (94-173)||(11151788-11151864)
chr2 (94-173)||(42362247-42362323)
[»] scaffold0140 (1 HSPs)
scaffold0140 (31-193)||(8188-8348)
[»] scaffold0087 (2 HSPs)
scaffold0087 (31-193)||(36603-36762)
scaffold0087 (31-193)||(43732-43891)
[»] scaffold0006 (3 HSPs)
scaffold0006 (31-193)||(133050-133209)
scaffold0006 (68-193)||(5888-6011)
scaffold0006 (68-193)||(2697-2819)
[»] scaffold0098 (1 HSPs)
scaffold0098 (41-193)||(45374-45525)
[»] scaffold0036 (1 HSPs)
scaffold0036 (57-190)||(85875-86006)
[»] scaffold0148 (1 HSPs)
scaffold0148 (68-197)||(10934-11064)
[»] scaffold0176 (1 HSPs)
scaffold0176 (80-193)||(17466-17577)
[»] scaffold0078 (1 HSPs)
scaffold0078 (69-193)||(23736-23859)
[»] scaffold0135 (1 HSPs)
scaffold0135 (94-199)||(34863-34967)
[»] scaffold0355 (2 HSPs)
scaffold0355 (94-184)||(3663-3754)
scaffold0355 (94-129)||(9514-9549)
[»] scaffold0464 (1 HSPs)
scaffold0464 (95-138)||(542-585)
[»] scaffold0477 (1 HSPs)
scaffold0477 (126-191)||(5728-5794)


Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 1261888 - 1261693
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1261888 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 1261789  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1261788 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa 1261693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 26288053 - 26288229
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  26288053 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactc 26288152  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttc 202  Q
    ||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26288153 aagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc 26288229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 26301310 - 26301486
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  26301310 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactc 26301409  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttc 202  Q
    ||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26301410 aagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc 26301486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 26313304 - 26313480
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  26313304 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactc 26313403  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttc 202  Q
    ||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26313404 aagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc 26313480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 18853100 - 18852903
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || ||||||||||||||||||||||| |||||||||||    
T  18853100 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaac 18853001  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||| ||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  18853000 ccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctctccttcaaaaaa 18852903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 18870494 - 18870297
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  18870494 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 18870395  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  18870394 ccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccatgtttctctctctaagctcttccaagctctccttcaaaaaa 18870297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 33037740 - 33037544
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  33037740 acaatatgaaccctaaa-gagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 33037642  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||| |||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33037641 ccaagagacactctctacgaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa 33037544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 30655810 - 30656006
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  30655810 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 30655909  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||||    
T  30655910 ccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctctttaagctcttccaagctctccttcaaaaaa 30656006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 4760008 - 4759813
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgttttt-cccaa 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || ||||||||||||||||||||||||||||| |||||    
T  4760008 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaa 4759909  T
Q  123 cccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaa 218  Q
    |||||||||| ||||||||||||||||||||||||   ||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  4759908 cccaagagactctctctacaaagacactcaaccctttggttacctcctttgcaatccaagattctctctctaagctcttccaagctctccttcaaa 4759813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 36979541 - 36979737
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||| ||||||    
T  36979541 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttt-cccaac 36979639  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    | ||||||| ||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||    
T  36979640 ctaagagacactctctacaaagacactcaaccctttggttcccttctttgtaatccaagtttctctctctaagctcttccaagctcttctccaaaaaa 36979737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 219
Target Start/End: Complemental strand, 10689075 - 10688878
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttcc---aatggtgaaatc-tcactacccaaggtgattacaatgtttttccca 121  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||   | |  |||| || |||||||||||||||||||||||||||||||||    
T  10689075 acaatatgaaccctaaaagagaagacactagaggaagctttagatcctcccccaactaatgaactcctcactacccaaggtgattacaatgtttttccca 10688976  T
Q  122 acccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    ||||||||||| ||||||||||||||||||||||||   |||||||||||||| |||||||||||||| ||| ||||||||||| ||||| |||||||    
T  10688975 acccaagagacactctctacaaagacactcaaccctttggttccctcctttgttatccaagtttctctttcttagctcttccaagctctctttcaaaa 10688878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 154
Target Start/End: Complemental strand, 31071163 - 31071035
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31071163 acaatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaaccc 31071064  T
Q  126 aagagaccctctctacaaagacactcaac 154  Q
    |||||| |||| |||||||||||||||||    
T  31071063 aagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 7412532 - 7412666
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  7412532 aggaagcttttgatcctttcaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| |||||||||||||||||||||||||||||    
T  7412630 taaagttacctcctttgtaatccaagtttctctctct 7412666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 4456195 - 4456354
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  4456195 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttctaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 4456291  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4456292 atcctcactacagagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 4456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 6311460 - 6311658
Alignment:
Q  26 acaatatgaaccctaaaa--gagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttccca 121  Q
    |||| |||||||||||||  |||||| | |||||||||||||| ||||||||||| |  |||| || |||||||||||||||||||||||||||||||||    
T  6311460 acaagatgaaccctaaaaaagagaagtcactagaggaagcttttgatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttccca 6311559  T
Q  122 acccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||||| ||||| ||||||||||||||||||   |||||||||||||  ||||||| |||| ||||||||||||||||| |||||  ||||||||    
T  6311560 acccaagagacactctcaacaaagacactcaaccctttggttccctcctttgctatccaag-ttctatctctaagctcttccaagctctctctcaaaaaa 6311658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 19175674 - 19175528
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | ||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||||  ||||| |||||||| |||| ||||    
T  19175674 aagagaagacacaaaaggaaacttttgatccttccaatagtgaaatctcactacccaaggtgtttacaatgttt--cccaatccaagagatcctcactac 19175577  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19175576 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 19175528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 4696502 - 4696379
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||  ||    
T  4696502 gatctttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatct 4696405  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  4696404 cctttgtaatccaagtttctctctct 4696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 5702374 - 5702251
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  5702374 gatcattccaatggtgaaatctcactacccaaggtgtttacaatattt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 5702277  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  5702276 cctttgtaatccaagtttctctctct 5702251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 23799470 - 23799347
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||| |||| |||    
T  23799470 gatccttccaatggtgaaatctccctactcaaggtgtttacaatgttc--cccaacccaagagatcctctctacaaagacactcaaccctaaagttacct 23799373  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  23799372 cctttgtaatccaagtttctctctct 23799347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 7289831 - 7289705
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  7289831 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 7289733  T
Q  194 aagctcttccaaactctccttcaaaaaa 221  Q
    |||||||||||| ||||| |||||||||    
T  7289732 aagctcttccaagctctctttcaaaaaa 7289705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 19752288 - 19752163
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||  | |||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  19752288 gatccttccaatgatgaaatctcactacccaaggtgtttacaatattt--cacaacccaagagaacctcactacaaagacactcaaccctaaagttacct 19752191  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||  ||||||||||||||||||||    
T  19752190 cctttgcgatccaagtttctctctctaa 19752163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 26403123 - 26402991
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccct-agagttc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| |||||||||||||||||||| | ||||     
T  26403123 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctaaaagtta 26403026  T
Q  165 cctcctttgtaatcc-aagtttctctctctaagct 198  Q
    ||||||||||| ||| | ||||||||||| |||||    
T  26403025 cctcctttgtattcctaggtttctctctcaaagct 26402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 3051323 - 3051447
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| |||||||||||||||||||||||||||| || ||||||||  ||||||||| ||||||| || | ||||||||||||||||||||| ||||| ||    
T  3051323 gatctttccaatggtgaaatctcactacccaagatgtttacaatg--tttcccaactcaagagaaccccactacaaagacactcaaccctaaagttctct 3051420  T
Q  168 cctttgtaat-ccaagtttctctctct 193  Q
    ||||| || | ||||||||||||||||    
T  3051421 cctttatagtcccaagtttctctctct 3051447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 28307766 - 28307889
Alignment:
Q  69 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 168  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||  |||||||||| |||||| ||   ||||||||||||||||| ||| |||| ||||    
T  28307766 atccttccaattgtgaaatctcactacccaaggtgttaacaatg--tttcccaacctaagagaaccgtgctacaaagacactcaactctaaagttacctc 28307863  T
Q  169 ctttgtaatcc-aagtttctctctct 193  Q
    ||||||||||| ||||||||||||||    
T  28307864 ctttgtaatcctaagtttctctctct 28307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 9054314 - 9054188
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||  ||| ||||||| |||||||| |||| |||| |||    
T  9054314 gatccttccaatggtgaaatctcactacccaaggtgattataatgtttt--ccaacccaagagaatctcactacaaaaacactcaatcctaaagttacct 9054217  T
Q  168 cctttgta-atccaagtttctctctctaa 195  Q
      ||||||  |||||||||||||| ||||    
T  9054216 tatttgtatttccaagtttctctccctaa 9054188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 6127426 - 6127515
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccct 157  Q
    ||||||||||||||||||||||||||||||||  || ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||    
T  6127426 gatccttccaatggtgaaatctcactacccaaaatgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccct 6127515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 5990446 - 5990333
Alignment:
Q  77 aatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta- 175  Q
    |||||||||||||||| | ||||| |||||||||||  ||||||||||||||||| |||| ||  ||||||||||||||||| |||| ||  |||||||     
T  5990446 aatggtgaaatctcacaaaccaagatgattacaatg--tttcccaacccaagagaacctcact--aaagacactcaaccctaaagttaccgtctttgtat 5990351  T
Q  176 atccaagtttctctctct 193  Q
     |||||||||||||||||    
T  5990350 ttccaagtttctctctct 5990333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 25328058 - 25327996
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||    
T  25328058 acccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaaccc 25327996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 25328184 - 25328122
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||    
T  25328184 acccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaaccc 25328122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 7493067 - 7492979
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaacccta 158  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||||  |||||||| |||||||| |||| |||||||  | ||||||||||    
T  7493067 gatccttctaattgtgaaatctcactacccaaggtgtttacaatg--tttcccaatccaagagaacctcactacaaatgctctcaacccta 7492979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 9765720 - 9765617
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctc 190  Q
    |||||||||| |||||||||||  ||||||||  |||||| |||| || |||||||||||||||||  |||| ||||||||||| | |||||||||||||    
T  9765720 acccaaggtgtttacaatgttt--cccaaccctcaagagaacctcact-caaagacactcaaccctcaagttacctcctttgtattcccaagtttctctc 9765624  T
Q  191 tctaagc 197  Q
    || ||||    
T  9765623 tcaaagc 9765617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 39784728 - 39784685
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  39784728 cccaaggtgattacaatgtttttcccaacctaagagactctctc 39784685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 4731629 - 4731532
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 192  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |  | ||||||||||||||    
T  4731629 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttttcaagtttctctctc 4731533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 13204670 - 13204558
Alignment:
Q  75 ccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgt 174  Q
    |||| |||||||||||||||||||||||| |||||||           ||||||||| ||||  |||||||||| | || | || |||| ||||||||||    
T  13204670 ccaacggtgaaatctcactacccaaggtgtttacaat-----------cccaagagaacctcattacaaagacatttaaacataaagttacctcctttgt 13204582  T
Q  175 a-atccaagtttctctctctaagc 197  Q
    |  |||||||||||||||||||||    
T  13204581 atttccaagtttctctctctaagc 13204558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 41266918 - 41266841
Alignment:
Q  117 tcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctctct 193  Q
    ||||||||||||||| ||||||  |||||||| ||||||||| |||| |||| ||||  |||| | ||||||||||||    
T  41266918 tcccaacccaagagaacctctcaccaaagacattcaaccctaaagttacctcatttgatatcctaggtttctctctct 41266841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 43036394 - 43036297
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 192  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  43036394 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 43036298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 178; Significance: 4e-96; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 26 - 219
Target Start/End: Complemental strand, 17886 - 17693
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17886 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 17787  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17786 aagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaa 17693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 26 - 219
Target Start/End: Complemental strand, 23979 - 23786
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23979 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 23880  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23879 aagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaa 23786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 21639971 - 21640164
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21639971 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaaccc 21640070  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21640071 aagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaa 21640164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 21646169 - 21646353
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21646169 acaatatgaaccctaaaagagaagacactagaggaagatttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaaccc 21646268  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactct 210  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  21646269 aagagatcctctctacaaagacactcaaccctagagtttcctcctttgtaatctaagtttctctctctaagctcttccaagctct 21646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 1533376 - 1533183
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacc 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  1533376 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacc 1533277  T
Q  125 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaa 218  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  1533276 caagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccctcaaa 1533183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 18413802 - 18413994
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    ||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  18413802 acaatatgaaccctaaaag-gaagacacaagaggaagcttaagatccttccaatggtgaaatctcactacccaaggtgtttacattgtttttcccaaccc 18413900  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  18413901 aagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaa 18413994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 18408926 - 18409118
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    ||||||||||||||||||| |||||| | ||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18408926 acaatatgaaccctaaaag-gaagacacaagaggaagcttaagatccttttaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaaccc 18409024  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  18409025 aagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaa 18409118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 20357480 - 20357285
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  20357480 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 20357381  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaa 220  Q
    ||||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||||    
T  20357380 ccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctcactaagctctaccaagctctccttcaaaaa 20357285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 2058130 - 2058318
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttcc---aatggtgaaatc-tcactacccaaggtgattacaatgtttttccca 121  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||   | |  |||| || |||||||||||||||||||||||||||||||||    
T  2058130 acaatatgaaccctaaaagagaagacactagaggaagctttagatcctcccccaactaatgaactcctcactacccaaggtgattacaatgtttttccca 2058229  T
Q  122 acccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctc 211  Q
    ||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  2058230 acccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaag-ttctctctctaagctcttccaagctctc 2058318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 2479528 - 2479662
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||| |||||||||||||||    
T  2479528 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaaccc 2479625  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || ||||||||||||||||||||||||||||||||||    
T  2479626 taaagttccctcctttgtaatccaagtttctctctct 2479662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 46516199 - 46516070
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| |||| ||||||||||||||||||||| |||| |||    
T  46516199 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaactcaagagatcctcactacaaagacactcaaccctaaagttacct 46516102  T
Q  168 cctttgtaatccaagtttctctctctaagctc 199  Q
    ||||||||||||||||||||||||||||||||    
T  46516101 cctttgtaatccaagtttctctctctaagctc 46516070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 21989072 - 21989231
Alignment:
Q  28 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 127  Q
    ||||||||||||||| ||||| ||  || |||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||  ||||||||||    
T  21989072 aatatgaaccctaaa-gagaaaacaataaaggaagcttatgatccttccaatggtaaaatctcactacccaaggtgtttacaatgttt--cccaacccaa 21989168  T
Q  128 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    |||| |||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  21989169 gagatcctcactacaaagacactcaaacctaaagttacctcctttgtaatccaagtttctctc 21989231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 20284292 - 20284415
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  20284292 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 20284389  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||| ||||||||||||||||||||    
T  20284390 cctttataatccaagtttctctctct 20284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 23402907 - 23402784
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  23402907 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 23402810  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  23402809 cctttgtaatccaagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 47263833 - 47263992
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    ||||||||||||  ||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||  ||||||| |||||    
T  47263833 atgaaccctaaat-agaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtatttacaatgttt--cccaaccgaagag 47263929  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |  ||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  47263930 attctcactacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctct 47263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 2647591 - 2647466
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||  ||    
T  2647591 gatccttccaatggtgaaatctcactacccaaggtgcttaccatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatct 2647494  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    |||||||| |||||||||||||||||||    
T  2647493 cctttgtagtccaagtttctctctctaa 2647466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 4796562 - 4796443
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| |||||||||||||||| |||| |||| |||    
T  4796562 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaa-cctaaagttacct 4796466  T
Q  168 cctttgtaatccaagtttctctc 190  Q
    |||||||||||||||||||||||    
T  4796465 cctttgtaatccaagtttctctc 4796443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 44848015 - 44847896
Alignment:
Q  72 cttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctt 171  Q
    ||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||||||    
T  44848015 cttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 44847918  T
Q  172 tgtaatccaagtttctctctct 193  Q
    | ||||||||||||||||||||    
T  44847917 tataatccaagtttctctctct 44847896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 2580593 - 2580717
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| | ||||||||||||||||||| |||| |||    
T  2580593 gatcctttcaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagagaacctcac-acaaagacactcaaccctaaagttacct 2580689  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    |||||| |||||||||||||||||||||    
T  2580690 cctttgcaatccaagtttctctctctaa 2580717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 9189901 - 9189775
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaag-acactcaaccctagagttccc 166  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||  |||||||| ||||||||||||| ||||  |    
T  9189901 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttatc 9189804  T
Q  167 tcctttgtaatccaagtttctctctctaa 195  Q
    ||||||| |||||||||||||||||||||    
T  9189803 tcctttgcaatccaagtttctctctctaa 9189775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 9185068 - 9184943
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||  ||||||||| ||||||||||| |||| |||    
T  9185068 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaaccttactacaaagatactcaaccctaaagttacct 9184971  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    |||||| |||| | ||||||||||||||    
T  9184970 cctttgcaatcaatgtttctctctctaa 9184943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 3047457 - 3047581
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||| ||||||||||||||||||| |||||| | |||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  3047457 gatccttccaatgatgaaatctcactacccaagatgattatagtgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 3047554  T
Q  168 cctttgtaat-ccaagtttctctctct 193  Q
    |||||||||| ||||||||||||||||    
T  3047555 cctttgtaatcccaagtttctctctct 3047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 4873310 - 4873424
Alignment:
Q  96 ccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||| ||||||| ||||||||||||    
T  4873310 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaag-ttctctctctaa 4873408  T
Q  196 gctcttccaaactctc 211  Q
    |||||||||| |||||    
T  4873409 gctcttccaagctctc 4873424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 33332344 - 33332221
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||  ||||||||||| |||  ||||||| ||||||||||||| |||| |||    
T  33332344 gatccttccaatggtgaaatctcactacccaagatgtttacaatgtttctc--aacccaagagaaccttactacaaaaacactcaaccctaaagttacct 33332247  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    |||||||||||||||||||| |||||    
T  33332246 cctttgtaatccaagtttctatctct 33332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 5817164 - 5817036
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||  |||||||||| || ||| |||| |||||||||||||||||| || |||| |||    
T  5817164 gatccttccaatggtgaaatctcactccccaaggtatttacaatg--tttcccaaccaaatagaacctcactacaaagacactcaaccataaagttacct 5817067  T
Q  168 cctttgtaat-ccaagtttctctctctaagc 197  Q
    |||||||| | ||||||||||||||||||||    
T  5817066 cctttgtattcccaagtttctctctctaagc 5817036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 12397091 - 12397195
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  12397091 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 12397189  T
Q  194 aagctc 199  Q
    ||||||    
T  12397190 aagctc 12397195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 200
Target Start/End: Original strand, 29160008 - 29160141
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||| ||||||||||||||| | |||| |    
T  29160008 gatccttccaatgttgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactataaagacactcaacccaaaagttac 29160105  T
Q  166 ctcctttgtaat-ccaagtttctctctctaagctct 200  Q
    |||||||||| | ||||||||||||||| |||||||    
T  29160106 ctcctttgtattcccaagtttctctctcaaagctct 29160141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 31109489 - 31109389
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtttctctctc 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||  |||||||||| ||||||    
T  31109489 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatatggttccctcctttgctatccaagtttttctctc 31109390  T
Q  193 t 193  Q
    |    
T  31109389 t 31109389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 24024232 - 24024128
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  24024232 acccacggtgattacaatgtttttccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 24024134  T
Q  194 aagctc 199  Q
    ||||||    
T  24024133 aagctc 24024128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 12406513 - 12406573
Alignment:
Q  96 ccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  12406513 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 12406573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 49091918 - 49092015
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||||||||| || ||||||||  |||||||||||| | ||||  ||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  49091918 acccaaggtgttttcaatgttt--cccaacccaagatatcctcagtacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctct 49092015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 21983450 - 21983536
Alignment:
Q  28 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 115  Q
    ||||||||||||||| ||||| || | | |||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  21983450 aatatgaaccctaaa-gagaaaacacaaaaggaagcttatgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 21983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 79640 - 79714
Alignment:
Q  119 ccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||| ||| |||| |||||||||||||||| | || |||| |||||||||||||||||||||||||||||    
T  79640 ccaacccaaaagatcctcactacaaagacactcaatcttaaagttacctcctttgtaatccaagtttctctctct 79714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 35960993 - 35961078
Alignment:
Q  42 aagagaagacgctagaggaagcttta-gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaag 128  Q
    ||||||| |||| | ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||    
T  35960993 aagagaaaacgcaaaaggaagctttttgatccttccaatggtgaaatctcactacctaaggtgtttacaatg--tttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 49091866 - 49091924
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaag 128  Q
    |||||||||||||||||||||||||||||||||||| || |||||  ||||||||||||||    
T  49091866 gatccttccaatggtgaaatctcactacccaaggtgttttcaatg--tttcccaacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 56152 - 56195
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaat 111  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  56152 gatccttccaatggtgaaatctcactacccaaggtgtttacaat 56195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 9235476 - 9235398
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagaca 148  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||||  |||||||||||||||||  ||| |||| ||||||    
T  9235476 gatccttgcaatggtgaaatatcactatccaaggtgtttacaatg--tttcccaacccaagagaatctcactacgaagaca 9235398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 21983541 - 21983578
Alignment:
Q  153 accctagagttccctcctttgtaatccaagtttctctc 190  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  21983541 accctaaagttacctcctttgtaatccaagtttctctc 21983578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 38671419 - 38671495
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 173  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  38671419 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 38671495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 6e-89; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 35387825 - 35388010
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35387825 acaatatgaaccctaaaagagaagacactagaggaagttttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttttttccaaccc 35387924  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctc 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  35387925 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctctaagctcttccaagctctc 35388010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 38219561 - 38219754
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38219561 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaaccc 38219660  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  38219661 aagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttcaaagctcttcttcaaaa 38219754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 24136011 - 24136206
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacc 124  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  24136011 acaatgtgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacc 24136110  T
Q  125 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaa 220  Q
    |||||||| || |||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||    
T  24136111 caagagacactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctcttagctcttccaagctctactccaaaaa 24136206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 205
Target Start/End: Original strand, 31180377 - 31180557
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  31180377 acaatatgaaccataaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 31180476  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaa 205  Q
    ||||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| ||||||||||||||||||||||    
T  31180477 ccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctctctaagctcttccaa 31180557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 15464700 - 15464860
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||||||    
T  15464700 atgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacgatg--tttcccaacccaagag 15464797  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  15464798 atcctcactacaaagacactcaaccctaaagtttccttctttgtaatccaagtttctctctct 15464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 36932279 - 36932119
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    ||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  36932279 atgaaccctaaaacagaagacacaagaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagag 36932182  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | | || ||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  36932181 atcatcactataaagacactcaaccctaaagttccctcctttgcaatccaagtttctctctct 36932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 9353253 - 9353103
Alignment:
Q  41 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 140  Q
    ||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||    
T  9353253 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcacta 9353156  T
Q  141 caaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  9353155 caaagacacttaaccctaaagttacctcctttgtaatccaagtttctctctct 9353103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 14520396 - 14520556
Alignment:
Q  30 tatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaaga 129  Q
    ||||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  14520396 tatgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaacccaaga 14520492  T
Q  130 gaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  14520493 gatcctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctctct 14520556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 28832460 - 28832585
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||| ||| |||| |||    
T  28832460 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaactctaaagttacct 28832557  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||    
T  28832558 cctttgtaatccaagtttctctctctaa 28832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 11916877 - 11916746
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||| |||||||||    
T  11916877 aggaagtttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagaaactcaaccc 11916780  T
Q  157 tagagttccctcctttgtaatccaagtttctctc 190  Q
    || |||| ||||||||||||||||||||||||||    
T  11916779 taaagttacctcctttgtaatccaagtttctctc 11916746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 31300494 - 31300364
Alignment:
Q  63 ctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagt 162  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||| |||| |||||||||||||||||| || |||    
T  31300494 cttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctc--aacccaagagaacctcactacaaagacactcaaccttaaagt 31300397  T
Q  163 tccctcctttgtaatccaagtttctctctctaa 195  Q
    | ||||||||| |||||||||||||||||||||    
T  31300396 tacctcctttgcaatccaagtttctctctctaa 31300364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 24553421 - 24553296
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||  |||| |||    
T  24553421 gatccttctaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacccttaagttacct 24553324  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    |||||||||||||||||||| |||||||    
T  24553323 cctttgtaatccaagtttctttctctaa 24553296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 11181726 - 11181603
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||| || |||| |||    
T  11181726 gatccttccaatggtgaaatttcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccataaagttacct 11181629  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||| ||||||||||||||||    
T  11181628 cctttgtaaaccaagtttctctctct 11181603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 17003853 - 17003730
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  || ||||||||||| |||| ||||||||||| ||||||||| ||||  ||    
T  17003853 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--ccaaacccaagagaacctcactacaaagacattcaaccctaaagttatct 17003756  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  17003755 cctttgtaatccaagtttctctctct 17003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 30631570 - 30631730
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatct--cactacccaaggtgattacaatgtttttcccaa 122  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||||||| |  |||| ||   |||||||||||||||||||||||||||||||||    
T  30631570 acaatatgaaccctaaa-gagaagtcactagaggaagctttagatccttccaactaatgaactcctccactacccaaggtgattacaatgtttttcccaa 30631668  T
Q  123 cccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtt 184  Q
    |||||||||| ||||| |||||||||||||||||    |||||||||||||| |||||||||    
T  30631669 cccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaagtt 30631730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 42127264 - 42127139
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||  ||||||||||| |||| ||||||||| |||||||| || |||| |||    
T  42127264 gatccttccaatggtgaaatctcactacccaaggtgtatacaatgtttctc--aacccaagagaacctcactacaaagatactcaaccttaaagttacct 42127167  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||| ||||||    
T  42127166 cctttgtaatccaagtttctcactctaa 42127139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 1457067 - 1456952
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  1457067 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 1456969  T
Q  194 aagctcttccaaactct 210  Q
    |||||||||||| ||||    
T  1456968 aagctcttccaagctct 1456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 10281955 - 10282085
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||  ||||||| |||| ||||||||||||||||||||| |||| |    
T  10281955 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcacaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 10282052  T
Q  166 ctcctttgtaatc-caagtttctctctctaagc 197  Q
    |||||||||| || |||||||||||||| ||||    
T  10282053 ctcctttgtattctcaagtttctctctcaaagc 10282085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 12084071 - 12083951
Alignment:
Q  69 atccttccaa-tggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||| ||||||| ||||||||||||||||| ||| |||||||   ||||||||||||| |||| ||| ||||||||||||||||| |||| |||    
T  12084071 atccttccaaatggtgaattctcactacccaaggtgtttaaaatgttta--ccaacccaagagatcctcactataaagacactcaaccctaaagttacct 12083974  T
Q  168 cctttgtaatccaagtttctctc 190  Q
    |||||||||||||||||||||||    
T  12083973 cctttgtaatccaagtttctctc 12083951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 27445150 - 27445254
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  27445150 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 27445248  T
Q  194 aagctc 199  Q
    ||||||    
T  27445249 aagctc 27445254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 27449994 - 27450098
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  27449994 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 27450092  T
Q  194 aagctc 199  Q
    ||||||    
T  27450093 aagctc 27450098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 43592459 - 43592563
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43592459 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43592557  T
Q  194 aagctc 199  Q
    ||||||    
T  43592558 aagctc 43592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 43598904 - 43599008
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43598904 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43599002  T
Q  194 aagctc 199  Q
    ||||||    
T  43599003 aagctc 43599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 43604396 - 43604500
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43604396 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43604494  T
Q  194 aagctc 199  Q
    ||||||    
T  43604495 aagctc 43604500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 43609888 - 43609992
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43609888 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43609986  T
Q  194 aagctc 199  Q
    ||||||    
T  43609987 aagctc 43609992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 7160798 - 7160689
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||  ||||| |||||||| |||| ||||||||||||||||||||| |||| |||    
T  7160798 gatccttccaatgatgaaatctcactgtccaaggtgattacaatgttt--cccaatccaagagaacctcactacaaagacactcaaccctaaagttacct 7160701  T
Q  168 cctttgtaatcc 179  Q
    | ||||||||||    
T  7160700 catttgtaatcc 7160689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 19588948 - 19589051
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| | || |||    
T  19588948 gatccttccaatggtgaaatctcactgcccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaaattacct 19589045  T
Q  168 cctttg 173  Q
    ||||||    
T  19589046 cctttg 19589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 15044865 - 15044956
Alignment:
Q  94 acccaaggtgattacaatgtttttccc-aacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtt 184  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    |||||||||||||  |||||||||    
T  15044865 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 15044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 3880503 - 3880634
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||| ||    | ||||||| |||| |||||| |||||||||| ||  |||| |||    
T  3880503 gatccttccaatggtgaaatctcacaacccaatgtgtttacaatgtttctcaaccctcaagagaacctcactacaaggacactcaactctcaagttacct 3880602  T
Q  168 cctttgtaatcc-aagtttctctctctaagct 198  Q
    |||||||| ||| | ||||||||||| |||||    
T  3880603 cctttgtattcctaggtttctctctcaaagct 3880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 33030824 - 33030728
Alignment:
Q  76 caatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta 175  Q
    ||||||||||||||||||||||||| |||||||||  | |||| |||||||||||| ||||  |||||| | ||||||||||| |||| |||| ||||||    
T  33030824 caatggtgaaatctcactacccaagatgattacaa--tatttctcaacccaagagaacctcgttacaaa-atactcaaccctaaagttacctcttttgta 33030728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 103
Target Start/End: Complemental strand, 42127304 - 42127269
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtg 103  Q
    ||||||||||||||||||||||||||||||||||||    
T  42127304 gatccttccaatggtgaaatctcactacccaaggtg 42127269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 28807479 - 28807436
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  28807479 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 28807436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 13488174 - 13488077
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 192  Q
    |||||||||| ||||||||||||  |||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  13488174 acccaaggtgtttacaatgtttt--ccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 13488078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 6e-89; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 24202703 - 24202518
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24202703 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgagatctcactacccaaggtgattacaatgtttttcccaaccc 24202604  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctc 211  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24202603 aagagacactctctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 24202518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 19366241 - 19366049
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  19366241 caatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaaccca 19366142  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  19366141 agagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaa 19366049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 19358776 - 19358585
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19358776 caatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt-cccaaccca 19358678  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  19358677 aaagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaa 19358585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 19361365 - 19361174
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19361365 caatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt-cccaaccca 19361267  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  19361266 agagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaa 19361174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 24787297 - 24787101
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || ||||| ||||||||||||| |||||||||||||||    
T  24787297 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactgcccaaggtgattataatgtttttcccaac 24787198  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  24787197 ccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctctctaagctcttccaagctctccttcaaaaaa 24787101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 13604552 - 13604393
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  13604552 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 13604456  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  13604455 atcctcactacaaagatactcaaccctaaagttccctcctttgtaatccaagtttctctctct 13604393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 47098719 - 47098594
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  47098719 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcgctacaaagacactcaaccctaaagttacct 47098622  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||    
T  47098621 cctttgtaatccaagtttctctctctaa 47098594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 3281884 - 3282030
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||| ||||    
T  3281884 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactac 3281981  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    |||||||||||||| || |||| |||| |||||||||||||||||||||    
T  3281982 aaagacactcaaccataaagttacctcatttgtaatccaagtttctctc 3282030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 21536490 - 21536344
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||| |||||| |||| ||||    
T  21536490 aagagaagacacaaaaggaagctttcgatccttccaatggtgaaatcttactacccaaggtgtttacaatgtttt--ccaacctaagagatcctcactac 21536393  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  21536392 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 21536344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 37069943 - 37070093
Alignment:
Q  41 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 140  Q
    ||||||||||| | | |||||||||| |||||||||||||||||||||||| || |||||||| |||||||||||  |||||||||||||| |||| |||    
T  37069943 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcattatccaaggtgtttacaatgttt--cccaacccaagagatcctcacta 37070040  T
Q  141 caaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  37070041 caaagacactcaaccataaagttacctcctttgtaatccaagtttctctctct 37070093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 47102733 - 47102608
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  47102733 gatccttccaatgatgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 47102636  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||    
T  47102635 cctttgtaatccaagtttctctctctaa 47102608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 29652016 - 29652137
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||| |||| ||||||||||||||||||||| |||| |||    
T  29652016 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaaaagatcctcactacaaagacactcaaccctaaagttacct 29652113  T
Q  168 cctttgtaatccaagtttctctct 191  Q
    ||||||||||||||||||||||||    
T  29652114 cctttgtaatccaagtttctctct 29652137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 32889632 - 32889766
Alignment:
Q  59 gaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaacccta 158  Q
    |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| | | |||| |||||||||||||||||||||    
T  32889632 gaagcttttgaaccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaaaaaaacctcactacaaagacactcaacccta 32889729  T
Q  159 gagttccctcctttgtaatccaagtttctctctctaa 195  Q
     |||| ||||||||| |||||||||||||||||||||    
T  32889730 aagttacctcctttgcaatccaagtttctctctctaa 32889766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 26644818 - 26644669
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||| ||| | || ||||    
T  26644818 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatg--tttcccaacccaaaagatcttcactac 26644721  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||| | ||  ||||||||||||||||||||||||||||    
T  26644720 aaagacactcaaccctaaaattatctcctttgtaatccaagtttctctctct 26644669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 13598603 - 13598726
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||| |||| |||||||||||||||||| || |||| |||    
T  13598603 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttg--ccaacccaagagatcctcactacaaagacactcaaccataaagttacct 13598700  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    |||||||||||||| |||||||||||    
T  13598701 cctttgtaatccaattttctctctct 13598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 27104291 - 27104171
Alignment:
Q  72 cttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctt 171  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||| || |||||||||||||||||| || |||| |||||||    
T  27104291 cttccaatggtgaaatctcactacccaaggtgcttataatgttt--cccaacccaagagacc-tcactacaaagacactcaaccttaaagttacctcctt 27104195  T
Q  172 tgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||    
T  27104194 tgtaatccaagtttctctctctaa 27104171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 19380005 - 19379916
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttt 116  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19380005 caatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt 19379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 9476465 - 9476590
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||| |||||||||||||||||||||||| || |||||||||||  ||||||| |||||| |||| ||||||||||| ||||||| | |||| |||    
T  9476465 gatccttcaaatggtgaaatctcactacccaagatgtttacaatgttt--cccaaccaaagagaacctcactacaaagacattcaacccaaaagttacct 9476562  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||    
T  9476563 cctttgtaatccaagtttctctctctaa 9476590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 40816710 - 40816580
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  40816710 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 40816613  T
Q  166 ctcctttgtaat-ccaagtttctctctctaagc 197  Q
    |||||||||| | ||||||||||||||| ||||    
T  40816612 ctcctttgtattcccaagtttctctctcaaagc 40816580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 47703824 - 47703699
Alignment:
Q  73 ttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttccctcct 170  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||| |||| ||||||    
T  47703824 ttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcct 47703727  T
Q  171 ttgtaatc-caagtttctctctctaagc 197  Q
    ||||| || |||||||||||||| ||||    
T  47703726 ttgtattctcaagtttctctctcaaagc 47703699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 19073131 - 19073256
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  19073131 gatccttccaatggtgaaatctcactatccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 19073228  T
Q  166 ctcctttgtaat-ccaagtttctctctc 192  Q
    |||||||||| | |||||||||||||||    
T  19073229 ctcctttgtattcccaagtttctctctc 19073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 19121021 - 19121146
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  19121021 gatccttccaatggtgaaatctcactatccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 19121118  T
Q  166 ctcctttgtaat-ccaagtttctctctc 192  Q
    |||||||||| | |||||||||||||||    
T  19121119 ctcctttgtattcccaagtttctctctc 19121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 22819634 - 22819756
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||| || |||| |||| |||    
T  22819634 gatccttccaatggtgaaatgtaactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactaaatcctaaagttacct 22819731  T
Q  168 cctttgt-aatccaagtttctctct 191  Q
    ||||||| || ||||||||||||||    
T  22819732 cctttgtaaacccaagtttctctct 22819756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 41398415 - 41398506
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt 184  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |   |||||||||||||  |||||||||    
T  41398415 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagtt 41398506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 41390760 - 41390819
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaa 153  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  41390760 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 41390819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 9022799 - 9022677
Alignment:
Q  69 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 168  Q
    |||||||||||||||||||||||||||  |||||| ||||||||  |||| |||||||||||| |||| ||||||||||| |||| || | || | ||||    
T  9022799 atccttccaatggtgaaatctcactacgaaaggtgtttacaatg--tttctcaacccaagagaacctcactacaaagacattcaa-ccaaaagatacctc 9022703  T
Q  169 ctttgt-aatccaagtttctctctct 193  Q
    |||||| || ||||||||||||||||    
T  9022702 ctttgtaaacccaagtttctctctct 9022677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 16124408 - 16124342
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctc 136  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||    
T  16124408 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctc 16124342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 1054917 - 1054874
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  1054917 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 1054874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 17345410 - 17345327
Alignment:
Q  115 tttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatc-caagtttctctctctaagc 197  Q
    |||| |||| ||||||| |||| ||||||||||||||||||||| |  | ||||||||||| || || ||||| ||||||||||    
T  17345410 tttctcaactcaagagaacctcactacaaagacactcaaccctaaatgtacctcctttgtattctcatgtttccctctctaagc 17345327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 25439801 - 25439758
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  25439801 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 25439758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 25444994 - 25444951
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  25444994 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 25444951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 39445679 - 39445722
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  39445679 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 39445722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 44023779 - 44023736
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  44023779 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 44023736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 197105 - 197181
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 173  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  197105 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 197181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 28468471 - 28468279
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  28468471 caatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaaccca 28468372  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  28468371 agagatcctcactacaaagacacttaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaa 28468279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 24742104 - 24742298
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  24742104 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 24742203  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaa 218  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  24742204 ccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctacaaa 24742298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 29760810 - 29760993
Alignment:
Q  30 tatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttt-tcccaaccca 126  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||| ||||||||||    
T  29760810 tatgaaccctaa--gagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaaccca 29760907  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctcc 212  Q
    |||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  29760908 agagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctcactctaagttcttccaagctctcc 29760993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 31985569 - 31985404
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    ||||| |||||||||||||||||||| | | |||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||  ||||||||    
T  31985569 acaatgtgaaccctaaaagagaagacacaaaaggaagcttttgatccttcccatggtgaaatttcactacccaaggtgtttacaatgttt--cccaaccc 31985472  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||||| ||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31985471 aagagatcctcaatacaaaaacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 31985404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 16623198 - 16623064
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  16623198 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16623101  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| |||||||||||||||||||||||||||||    
T  16623100 taaagttacctcctttgtaatccaagtttctctctct 16623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 5396601 - 5396442
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | || ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  5396601 atgaaccctaaa-gagaagacacaaaagaaagcttttgattcttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 5396505  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  5396504 atcctcactacaaagacactcaaccctaaagtaacctcctttgtaatccaagtttctctctct 5396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 16628777 - 16628643
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  16628777 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16628680  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| ||||||||| ||||||| |||||||||||    
T  16628679 taaagttacctcctttgcaatccaattttctctctct 16628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 3777752 - 3777875
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  3777752 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 3777849  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  3777850 cctttgtaatccaagtttctctctct 3777875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 5269094 - 5268971
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  5269094 gatccttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 5268997  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  5268996 cctttgtaatccaagtttctctctct 5268971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 10047584 - 10047707
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||  |||||||||||||||||||| |||| |||    
T  10047584 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcattacaaagacactcaaccctaaagttacct 10047681  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  10047682 cctttgtaatccaagtttctctctct 10047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 36315135 - 36315001
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  36315135 aggaagcttttgatccttccaatggttaaatctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaaccc 36315038  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| ||||||||||||||||||||| |||||||    
T  36315037 taaagttacctcctttgtaatccaagtttatctctct 36315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 36329344 - 36329210
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  36329344 aggaagcttttgatccttccaatggttaaatctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaaccc 36329247  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| ||||||||||||||||||||| |||||||    
T  36329246 taaagttacctcctttgtaatccaagtttatctctct 36329210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 25861927 - 25861802
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  25861927 gatccttccaatggtgaaatctcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 25861830  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
     |||||||||||||||||||||||||||    
T  25861829 tctttgtaatccaagtttctctctctaa 25861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 6743320 - 6743186
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||| ||    
T  6743320 aggaagtttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcgctacaaagacactcaaacc 6743223  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    |  |||| |||||||||||||||||||||||||||||    
T  6743222 tcaagttacctcctttgtaatccaagtttctctctct 6743186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 8689416 - 8689270
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | ||||| |||| ||||||||||||||||||||||||||| |||||||| ||| |||||||  |||||||||||||| |||| ||||    
T  8689416 aagagaagacacaaaaggaaacttttgatccttccaatggtgaaatctcactatccaaggtgtttaaaatgttt--cccaacccaagagatcctcactac 8689319  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  8689318 aaagacactaaaccctaaagttacctcctttgtaatccaagtttctctc 8689270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 5143424 - 5143582
Alignment:
Q  28 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 127  Q
    ||||||||||||||| ||||| || | | |||||||||  ||||||||||||||||||||||||||||| |||||| |||||| ||||  ||||| ||||    
T  5143424 aatatgaaccctaaa-gagaaaacacaaaaggaagcttatgatccttccaatggtgaaatctcactacctaaggtgtttacaaagttt--cccaatccaa 5143520  T
Q  128 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctct 189  Q
    |||| |||| ||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  5143521 gagatcctcactacaaagacactcaaccctaaagttacctcctctgtaatccaagtttctct 5143582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 5112440 - 5112564
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||| | |||||||||||||| |||| | || |||    
T  5112440 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagaacctcacaacaaagacactcaaacctaaaattacct 5112537  T
Q  168 cctttgtaatc-caagtttctctctct 193  Q
    ||||||||||| |||||||||||||||    
T  5112538 cctttgtaatctcaagtttctctctct 5112564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 42599467 - 42599344
Alignment:
Q  69 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 168  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||  |||||||||| |||||| |||| |||||||||||||||| |||| |||| ||||    
T  42599467 atccttccaatggtgaaatctcactacccaaggtgtttagaatg--tttcccaaccgaagagaacctcactacaaagacactcaa-cctaaagttacctc 42599371  T
Q  169 ctttgtaatccaagtttctctctctaa 195  Q
    |||||||||||||||||||||| ||||    
T  42599370 ctttgtaatccaagtttctctcactaa 42599344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 5147840 - 5148001
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    ||||||||||||||||| ||||| || | | |||||||||  |||||||||||||||||||||||| || |||| ||| |||||||||||  |||||| |    
T  5147840 acaatatgaaccctaaa-gagaaaacacaaaaggaagcttatgatccttccaatggtgaaatctcattatccaatgtgtttacaatgttt--cccaactc 5147936  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    |||||| |||  ||||||||||||| ||||||| |||| |||||| |||||||||||||||||||    
T  5147937 aagagatccttactacaaagacactaaaccctaaagttacctcctgtgtaatccaagtttctctc 5148001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 38152342 - 38152208
Alignment:
Q  58 ggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccct 157  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| ||||||| |||  |||| ||||||||| |||| ||||||||||||||||||||    
T  38152342 ggaagcttttgatccttccaatggtgaattgtcactacccaaggtgtttacaatattt--cccatcccaagagatcctcactacaaagacactcaaccct 38152245  T
Q  158 agagttccctcctttgtaatcc-aagtttctctctct 193  Q
    | |||| |||| |||||||||| || |||||||||||    
T  38152244 aaagttacctcatttgtaatccaaattttctctctct 38152208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 24334014 - 24334144
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| |||||||||| |||||||||| |||| |    
T  24334014 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagactctcaaccctaaagttac 24334111  T
Q  166 ctcctttgtaat-ccaagtttctctctctaagc 197  Q
    || ||||||| | ||||||||||||||| ||||    
T  24334112 cttctttgtattcccaagtttctctctcaaagc 24334144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 54867385 - 54867505
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||  ||| ||||||  |     |||||||||||||  ||| ||||||||||||||||||||| |||| |||    
T  54867385 gatccttccaatggtgaaatctcactacccatagtgtttacaactt-----ccaacccaagagattctcactacaaagacactcaaccctaaagttacct 54867479  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  54867480 cctttgtaatccaagtttctctctct 54867505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 51520637 - 51520741
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    ||||||||||||   ||||||| ||||||||||    
T  51520637 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttttctatccaag-ttctctctct 51520735  T
Q  194 aagctc 199  Q
    ||||||    
T  51520736 aagctc 51520741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 3793974 - 3793843
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||  ||||||  ||||||| |||| ||| ||||||||||||||||| |||| |    
T  3793974 gatcctttctatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaaccctcaagagaacctcactataaagacactcaaccctaaagttac 3793877  T
Q  166 ctcctttgtaat-ccaagtttctctctctaagct 198  Q
    ||||||| || | ||||||||||||||| |||||    
T  3793876 ctcctttatattcccaagtttctctctcaaagct 3793843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 9224312 - 9224208
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  9224312 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 9224214  T
Q  194 aagctc 199  Q
    ||||||    
T  9224213 aagctc 9224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 9229099 - 9228995
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  9229099 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 9229001  T
Q  194 aagctc 199  Q
    ||||||    
T  9229000 aagctc 9228995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 39774199 - 39774075
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||  ||||||||| ||||||| ||||  |||||| |  |||||||||| |||| |||    
T  39774199 gatcattccaatggtgaaaactcactacccaaggtgtttacaatg--tttcccaactcaagagaacctcgttacaaataatctcaaccctaaagttacct 39774102  T
Q  168 cctttgt-aatccaagtttctctctct 193  Q
    ||||||| || ||||||||||||||||    
T  39774101 cctttgtaaacccaagtttctctctct 39774075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 18712671 - 18712581
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtt 184  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  |||||||||    
T  18712671 acccaaggtgataacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 18712581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 6542378 - 6542480
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctctc 192  Q
    |||||||||| |||||||||||  |||||||||||||| ||||  |||||||||||||||||||| |||| ||||||||||| ||| | |||||||||||    
T  6542378 acccaaggtgtttacaatgttt--cccaacccaagagaacctcattacaaagacactcaaccctaaagttacctcctttgtattcctaggtttctctctc 6542475  T
Q  193 taagc 197  Q
     ||||    
T  6542476 aaagc 6542480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 51337035 - 51336933
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctctc 192  Q
    |||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||| ||||||||| |||| | ||||||||| ||| |||||||||||||    
T  51337035 acccaaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgtattcctaagtttctctctc 51336938  T
Q  193 taagc 197  Q
     ||||    
T  51336937 aaagc 51336933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 18377562 - 18377679
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||| |||||||| ||||||||| | ||||||||||||  ||| ||||||||| |||| ||||||| ||||||||      ||||  ||    
T  18377562 gatccttccaatggtaaaatctcattacccaaggggtttacaatgtttt--ccatcccaagagaacctcactacaaatacactcaa------agttaact 18377653  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    |||||||||||||||||||| |||||    
T  18377654 cctttgtaatccaagtttctttctct 18377679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 1983194 - 1983070
Alignment:
Q  69 atccttccaatggtgaaa-tctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||| ||| |||| ||| |||| ||||||||||   | |||||||||| | |||| ||||||||||||||||||||| |||| |||    
T  1983194 atccttccaatggtgaaaatcttactaaccagggtgtttacaatgtta--cacaacccaagataacctcactacaaagacactcaaccctaaagttacct 1983097  T
Q  168 cctttgt-aatccaagtttctctctct 193  Q
     |||||| || |||||| |||||||||    
T  1983096 tctttgtaaacccaagtctctctctct 1983070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 3814202 - 3814257
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacac 149  Q
    ||||||||||||||||||||||||||||||| |||| || |||||  |||||||||    
T  3814202 acccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaagacac 3814257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 37782070 - 37782170
Alignment:
Q  72 cttccaatggtgaaatctcactacccaaggtgattac-aatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcct 170  Q
    ||||||||  |||||||||||||||||||||| |||| ||||||||  ||||||||||||| ||||||  |||||| | ||||| ||| |||| |||| |    
T  37782070 cttccaataatgaaatctcactacccaaggtgtttacaaatgtttt--ccaacccaagagagcctctcaccaaagatattcaactctaaagttacctcat 37782167  T
Q  171 ttg 173  Q
    |||    
T  37782168 ttg 37782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 45347721 - 45347678
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  45347721 cccaaggtgattacaatgtttttcccaacctaagagacactctc 45347678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 6677420 - 6677362
Alignment:
Q  115 tttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 173  Q
    ||||||||||||||||| || ||  ||||||||||||||||||| |||| |||||||||    
T  6677420 tttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttg 6677362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 5732844 - 5732887
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  5732844 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 5732887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 18855906 - 18855949
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  18855906 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 18855949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 45357201 - 45357158
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  45357201 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 45357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 4587929 - 4587823
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctac-aaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctct 191  Q
    |||||||||| |||||||||||  ||||||||| |||| |||| |||| ||||||||| ||||||| ||||  ||| |||||| ||| | ||||||||||    
T  4587929 acccaaggtgtttacaatgttt--cccaacccatgagaacctcactacaaaagacacttaaccctaaagttatctcatttgtattcctaggtttctctct 4587832  T
Q  192 ctaagctct 200  Q
      |||||||    
T  4587831 tgaagctct 4587823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 48143013 - 48142916
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 192  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  48143013 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 48142917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 48893839 - 48893920
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttccctcctttgta 175  Q
    |||||||||| |||||||||||  || |||||  |||||| |||| ||||||||||||||||||||  | || |||||||||||    
T  48893839 acccaaggtgtttacaatgttt--ccaaaccctaaagagaacctcactacaaagacactcaaccctcaaattacctcctttgta 48893920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 52082854 - 52082951
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 192  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  52082854 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 52082950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 9e-82; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 27 - 220
Target Start/End: Original strand, 1306112 - 1306305
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1306112 caatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaaccca 1306211  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaa 220  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  1306212 agagatcctcactacaaagacactcaactctagagttccctcctttataatccaagtttctctctctaagctcttccaagctctcctccaaaaa 1306305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 26 - 210
Target Start/End: Complemental strand, 2671519 - 2671333
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  2671519 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 2671420  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactct 210  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2671419 ccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct 2671333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 9091234 - 9091037
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  9091234 acaatatgaaccctagaagagaagacactagaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 9091135  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||  ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9091134 ccaagagatactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa 9091037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 40372727 - 40372542
Alignment:
Q  28 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  40372727 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 40372628  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctc 211  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40372627 aagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 40372542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 8477528 - 8477724
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  8477528 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 8477627  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaa 220  Q
    ||||||||| ||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  8477628 ccaagagacactctctacaaagacactcaaccctttggttccctcctctgtaatccaagtttctctctctaagctcttccaagctctcttccaaaaa 8477724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 8738996 - 8738799
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  8738996 acaatatgaaccctagaagagaagacactagaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 8738897  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||||||||  |||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  8738896 ccaagagatactctctacaaagacactcaacccattggttccctcctttgcaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa 8738799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 32143485 - 32143649
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  32143485 caatatgaaccctaaaagagaagacacaagaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaaccca 32143582  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||| | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32143583 agagatcatcactacaaagacactcaaccctagagttccctcctttgtaatccaaatttctctctct 32143649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 26928524 - 26928359
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||    
T  26928524 acaatatgaaccctaaaagagaagacacaagaggaagcttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatg--tttcccaaccc 26928427  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  26928426 aagagatcctcactacaaagacactcaaccctagagttccctcgtttgtaatccaagtttttctctct 26928359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 7167408 - 7167595
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttt-tcccaa 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||| ||||||    
T  7167408 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaa 7167507  T
Q  123 cccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactct 210  Q
    |||||||||| ||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  7167508 cccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctct 7167595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 27986380 - 27986216
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    |||||| |||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  27986380 caatatcaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaaccca 27986283  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27986282 agagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 27986216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 28501630 - 28501429
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  28501630 acaatatgaaccctaaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 28501531  T
Q  124 ccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt---tctctctctaagctcttccaaactctccttcaaaa 219  Q
    ||||||||| ||||| ||||||||||||| ||| |   |||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||    
T  28501530 ccaagagacactctcaacaaagacactcatcccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaa 28501431  T
Q  220 aa 221  Q
    ||    
T  28501430 aa 28501429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 28503797 - 28503596
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||| |  |||| || ||||||||||||||||||||||| |||||||||||    
T  28503797 acaatatgaaccctaaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaac 28503698  T
Q  124 ccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt---tctctctctaagctcttccaaactctccttcaaaa 219  Q
    ||||||||| ||||| ||||||||||||||||| |   |||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||    
T  28503697 ccaagagacactctcaacaaagacactcaacccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaa 28503598  T
Q  220 aa 221  Q
    ||    
T  28503597 aa 28503596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 33386595 - 33386435
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||    
T  33386595 atgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttctcaacccaagag 33386498  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  33386497 atcctcactacaaagacactcaaccctaaagttctctcctttgtaatccaagtttctctctct 33386435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 27453122 - 27453284
Alignment:
Q  27 caatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccca 126  Q
    ||||||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||    
T  27453122 caatatgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttgccaaccca 27453219  T
Q  127 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||| |||| ||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27453220 agagatcctcactac--agacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 27453284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 27974871 - 27974712
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||    
T  27974871 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccgacccaagag 27974775  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  27974774 atcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 27974712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 21711414 - 21711548
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  21711414 aggaagcttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 21711511  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| |||||||||||||||||||||||||||||    
T  21711512 taaagttacctcctttgtaatccaagtttctctctct 21711548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 42 - 189
Target Start/End: Original strand, 16264526 - 16264671
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||  |||    
T  16264526 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcattac 16264623  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctct 189  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  16264624 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctct 16264671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 40592665 - 40592542
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  40592665 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 40592568  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  40592567 cctttgtaatccaagtttctctctct 40592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 8370383 - 8370249
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  8370383 aggaaacttttgatccttccaatggtgaaatctcactacccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 8370286  T
Q  157 tagagttccctcctttgtaatccaagtttctctctct 193  Q
    || |||| |||||||||||||||||||||||||||||    
T  8370285 taaagttacctcctttgtaatccaagtttctctctct 8370249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 36029285 - 36029415
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  36029285 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36029382  T
Q  157 tagagttccctcctttgtaatccaagtttctct 189  Q
    || | || |||||||||||||||||||||||||    
T  36029383 taaatttacctcctttgtaatccaagtttctct 36029415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 39032463 - 39032315
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||||||  ||| ||||    
T  39032463 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttaccaacccaagaga-tctcactac 39032367  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  39032366 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 39032315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 1736187 - 1736064
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||| |||| ||||||||||||||||||||| |||| |||    
T  1736187 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacct 1736090  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  1736089 cctttgtaatccaagtttctctctct 1736064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 6794609 - 6794473
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| |||| |||||| ||||||||||||    
T  6794609 aggaagcttttgttcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaactcaagagaacctcactacaatgacactcaaccc 6794512  T
Q  157 tagagttccctcctttgtaatccaagtttctctctctaa 195  Q
    || |||| |||||||||||||||||||||||||||||||    
T  6794511 taaagttacctcctttgtaatccaagtttctctctctaa 6794473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 47923787 - 47923664
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||  ||| |||||||||||||||| |||| |||| |||    
T  47923787 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagattctcactacaaagacactcaatcctaaagttacct 47923690  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  47923689 cctttgtaatccaagtttctctctct 47923664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 26299196 - 26299316
Alignment:
Q  73 ttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctccttt 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||||| |||| ||||||||    
T  26299196 ttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacattcaaccctaaagttacctccttt 26299293  T
Q  173 gtaatccaagtttctctctctaa 195  Q
     ||||||||||||||||||||||    
T  26299294 ataatccaagtttctctctctaa 26299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 24695049 - 24694926
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  24695049 gatcattccaatggtgaaatctcaccacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 24694952  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    |||||||||||||| |||||||||||    
T  24694951 cctttgtaatccaaatttctctctct 24694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 35925670 - 35925803
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||| |||| ||||||||||| |||||||    
T  35925670 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaaaagatcctcactacaaagacattcaaccc 35925767  T
Q  157 tagagttcc--ctcctttgtaatccaagtttctctc 190  Q
    || |||| |  |||||||||||||||||||||||||    
T  35925768 taaagttacatctcctttgtaatccaagtttctctc 35925803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 37725871 - 37726001
Alignment:
Q  61 agctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctaga 160  Q
    |||||| ||||||| ||||||||||||||||||| |||||||| ||| |||||||  ||| |||||||||| |||| ||||||||||||||||||||| |    
T  37725871 agcttttgatcctttcaatggtgaaatctcactatccaaggtgtttataatgttt--ccccacccaagagatcctcactacaaagacactcaaccctaaa 37725968  T
Q  161 gttccctcctttgtaatccaagtttctctctct 193  Q
    ||| |||||||||||||||||||||||||||||    
T  37725969 gtttcctcctttgtaatccaagtttctctctct 37726001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 3323574 - 3323449
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||| ||||||||||||||||| |||| |||    
T  3323574 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactataaagacactcaaccctaaagttacct 3323477  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||| |||||| |||||||||    
T  3323476 cctttgtaatcgaagtttgtctctctaa 3323449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 3328240 - 3328115
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||||||||  ||| ||||||||||| ||||||||| ||||  ||    
T  3328240 gatccttccaatgctgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagagaagctcactacaaagacattcaaccctaaagttatct 3328143  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||| ||||||||||||||||||||||    
T  3328142 cctttctaatccaagtttctctctctaa 3328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 48438419 - 48438539
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||| |||||| |||  ||||||||||||||||||||| |||| |||    
T  48438419 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacc-aagagatccttactacaaagacactcaaccctaaagttacct 48438515  T
Q  168 cctttgtaatccaagtttctctct 191  Q
    ||||||||||||||||||||||||    
T  48438516 cctttgtaatccaagtttctctct 48438539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 68 - 200
Target Start/End: Complemental strand, 3715885 - 3715752
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||| ||||||||| |||| |    
T  3715885 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacattcaaccctaaagttac 3715788  T
Q  166 ctcctttgtaatc-caagtttctctctctaagctct 200  Q
    |||||||||| || |||||||||||||| |||||||    
T  3715787 ctcctttgtattctcaagtttctctctcaaagctct 3715752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 1417374 - 1417249
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||| ||||||||||||||||||||| || ||| |||||||||||  |||||||||||| | |||| ||||||||||||||||||||| |||| |||    
T  1417374 gatcctttcaatggtgaaatctcactacctaaagtgtttacaatgttt--cccaacccaagataacctcactacaaagacactcaaccctaaagttacct 1417277  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    |||||||||| ||||||| |||||||||    
T  1417276 cctttgtaattcaagtttttctctctaa 1417249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 8126833 - 8126958
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||  |||||||||||| | |||| |||||||||||||||||  || |||| | |    
T  8126833 gatccttccaatgatgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagaaaacctcactacaaagacactcaactgtaaagttactt 8126930  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
     |||||||||||||||||||||||||||    
T  8126931 tctttgtaatccaagtttctctctctaa 8126958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 37466498 - 37466623
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| |||||||||||||||||||| |||||| ||| |||||||||||  ||||||| |||||| |||| ||||||||||||||| | ||| |||| |||    
T  37466498 gatctttccaatggtgaaatctcacaacccaaagtgtttacaatgttt--cccaacctaagagaacctcactacaaagacactcagctctaaagttacct 37466595  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||    
T  37466596 cctttgtaatccaagtttctctctctaa 37466623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 25929278 - 25929159
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||| ||||||||||||||||||||||| || ||||||||||||  ||||| ||||||| |||| ||||||||||||||||||||| |||| |||    
T  25929278 gatccttccgatggtgaaatctcactacccaag-tgtttacaatgtttt--ccaactcaagagaacctcactacaaagacactcaaccctaaagttacct 25929182  T
Q  168 cctttgtaatccaagtttctctc 190  Q
    ||||||||||| |||||||||||    
T  25929181 cctttgtaatctaagtttctctc 25929159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 196
Target Start/End: Complemental strand, 4386846 - 4386733
Alignment:
Q  82 tgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta-atcca 180  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||  | ||    
T  4386846 tgaaatctcactactcaaggtgattacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattttca 4386749  T
Q  181 agtttctctctctaag 196  Q
    ||||||||||||||||    
T  4386748 agtttctctctctaag 4386733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 25795983 - 25796113
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  25795983 gatccttccaatggtgaaatctcactacccaaggtgtttacattg--tttcccaaccctcaagagagcctcactacaaagacactcaaccctcaagttac 25796080  T
Q  166 ctcctttgtaat-ccaagtttctctctctaagc 197  Q
    |||||||||| | ||||||||||||||| ||||    
T  25796081 ctcctttgtattcccaagtttctctctcaaagc 25796113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 27026925 - 27027032
Alignment:
Q  84 aaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagt 183  Q
    |||||||||||||||||||| |||||||||||  ||| | |||||||| ||||  |||||||||||||||||||| |||| |||||||||||||||||||    
T  27026925 aaatctcactacccaaggtgtttacaatgttt--ccctatccaagagatcctcagtacaaagacactcaaccctaaagttacctcctttgtaatccaagt 27027022  T
Q  184 ttctctctct 193  Q
    || |||||||    
T  27027023 ttttctctct 27027032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 27038270 - 27038377
Alignment:
Q  84 aaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagt 183  Q
    ||||||||| |||||||||| |||||||||||  ||| |||||||||| |||| |||||||| |||||||||||| ||||  ||||||||||||||||||    
T  27038270 aaatctcaccacccaaggtgtttacaatgttt--ccctacccaagagatcctcactacaaaggcactcaaccctaaagttatctcctttgtaatccaagt 27038367  T
Q  184 ttctctctct 193  Q
    || |||||||    
T  27038368 ttttctctct 27038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 22173100 - 22172996
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    ||||||| |||||  ||||||| |||||| |||    
T  22173100 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctactttgctatccaag-ttctctttct 22173002  T
Q  194 aagctc 199  Q
    ||||||    
T  22173001 aagctc 22172996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 47649773 - 47649898
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||| ||||      
T  47649773 gatccttcaaatggtgaaatctaactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttat 47649870  T
Q  166 ctcctttgtaat-ccaagtttctctctc 192  Q
    |||||||||| | |||||||||| ||||    
T  47649871 ctcctttgtattcccaagtttctatctc 47649898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 23410529 - 23410624
Alignment:
Q  97 caaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctctct 193  Q
    ||||||| ||||||||||||  ||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||    
T  23410529 caaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacactcaaccctaaagttctctcctttgcaatcccaagtttctctctct 23410624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 40844874 - 40844977
Alignment:
Q  84 aaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagt 183  Q
    |||||||| ||| ||||||| ||||||||||| ||  ||||||| ||| |||| ||||||||||||||||||||| |||| |||||||||||||| ||||    
T  40844874 aaatctcattactcaaggtgtttacaatgtttctc--aacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagt 40844971  T
Q  184 ttctct 189  Q
    ||||||    
T  40844972 ttctct 40844977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 23392106 - 23392204
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctctc 192  Q
    |||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| | ||| |||||||| | | |||||||||||||||    
T  23392106 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaatttctctcctttgcagtcccaagtttctctctc 23392203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 21353765 - 21353898
Alignment:
Q  68 gatccttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactc--aaccctagagt 162  Q
    ||||||||||||||||| || |||||||||||| ||| |||| ||||||  ||||||||  |||||| |||| ||||||||||||||  ||||||| |||    
T  21353765 gatccttccaatggtgacattctcactacccaaagtgtttacgatgttt--cccaaccctcaagagaacctcactacaaagacactcaaaaccctaaagt 21353862  T
Q  163 tccctcctttgtaatcc-aagtttctctctctaagc 197  Q
    | ||||||||||| ||| | ||||||||||||||||    
T  21353863 tacctcctttgtattcctaggtttctctctctaagc 21353898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 18552768 - 18552721
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18552768 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 18552721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 30709672 - 30709557
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| |||||||| |||||||||||| ||||||||| |||||||||||  |||||||||| ||| | ||        |||||||||| ||| |||| |||    
T  30709672 gatcattccaatgatgaaatctcactccccaaggtgtttacaatgttt--cccaacccaaaagatcatc--------gacactcaactctaaagttacct 30709583  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    |||||||||||||||||||| |||||    
T  30709582 cctttgtaatccaagtttctgtctct 30709557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 10274603 - 10274646
Alignment:
Q  86 atctcactacccaaggtgattacaatgtttttcccaacccaaga 129  Q
    ||||||||||||||||||| || ||||| |||||||||||||||    
T  10274603 atctcactacccaaggtgaatataatgtgtttcccaacccaaga 10274646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 18656614 - 18656657
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  18656614 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 18656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 22835199 - 22835275
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 173  Q
    |||||||||||||||||||  ||||||||| |||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  22835199 acccaaggtgattacaatg--tttcccaacacaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 22835275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 39153558 - 39153634
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 173  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  39153558 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 39153634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 5674702 - 5674509
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacc 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  5674702 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacc 5674603  T
Q  125 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaa 218  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  5674602 caagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttatctctctaagctcttccaagctctcctccaaa 5674509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 22709171 - 22709364
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||    
T  22709171 acaatatgaaccctaaaagagaagacacaagaggaagtttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaaccc 22709268  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct--aagctcttccaaactctccttcaaaa 219  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||| || |||||    
T  22709269 aagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctcttcaaactcttccaaactctactccaaaa 22709364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 5757408 - 5757249
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| |   |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  5757408 atgaaccctaaa-gagaagacacggaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 5757312  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||   |||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  5757311 atcctaaatacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 5757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 31936778 - 31936903
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||| |||| ||||||||||||||||||||| |||| |||    
T  31936778 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacct 31936875  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    |||||| |||||||||||||||||||||    
T  31936876 cctttgcaatccaagtttctctctctaa 31936903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 31979704 - 31979840
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||| ||| |||| |||||||||||||||||||    
T  31979704 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttctcaacccaaaagaacctcactacaaagacactcaaccc 31979801  T
Q  157 tagagttccctcctttgtaatccaagtttctctctctaa 195  Q
    || |||| ||||||||| | |||||||||||||||||||    
T  31979802 taaagttacctcctttgcagtccaagtttctctctctaa 31979840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 5572148 - 5572012
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||  |||||||||||||| || | |||||||||||| ||||||    
T  5572148 aggaagcttttgatcattccaatagtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatccccactacaaagacacccaaccc 5572051  T
Q  157 tagagttccctcctttgtaatccaagtttctctctctaa 195  Q
    || |||| ||||| |||||||||||||||||||||||||    
T  5572050 taaagttacctccattgtaatccaagtttctctctctaa 5572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 31086377 - 31086245
Alignment:
Q  59 gaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaacccta 158  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||  |||| |||||| |||| |||||||||||||||||||||    
T  31086377 gaagcttttgatccttccaatggtgaaatctcacaacccaaggtgtttacaatgtttctc--aacctaagagatcctcactacaaagacactcaacccta 31086280  T
Q  159 gagttccctcctttgtaatccaagtttctctctct 193  Q
     |||| || ||||||||||||||||||||||||||    
T  31086279 aagttaccccctttgtaatccaagtttctctctct 31086245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 5017390 - 5017271
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||  ||    
T  5017390 gatccttccaatggtgaaatctcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatct 5017293  T
Q  168 cctttgtaatccaagtttctct 189  Q
    | ||||||||||||||||||||    
T  5017292 cgtttgtaatccaagtttctct 5017271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 24435865 - 24435743
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||| |||| | ||||||||||||||||||| ||||  ||    
T  24435865 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaactcaagagaacctcac-acaaagacactcaaccctaaagttatct 24435769  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    |||||||||||| |||||||||||||    
T  24435768 cctttgtaatcctagtttctctctct 24435743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 22963902 - 22964023
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||||| | || ||||||||||||||||||||| ||||  ||    
T  22963902 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagct 22963999  T
Q  168 cctttgtaatccaagtttctctct 191  Q
    | ||||||||| ||||||||||||    
T  22964000 cttttgtaatcaaagtttctctct 22964023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 23824491 - 23824370
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||||| | || ||||||||||||||||||||| ||||  ||    
T  23824491 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagct 23824394  T
Q  168 cctttgtaatccaagtttctctct 191  Q
    | ||||||||| ||||||||||||    
T  23824393 cttttgtaatcaaagtttctctct 23824370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 11857154 - 11857258
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  11857154 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 11857252  T
Q  194 aagctc 199  Q
    ||||||    
T  11857253 aagctc 11857258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 14737482 - 14737378
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||| ||||||| |||||||||     
T  14737482 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaag-ttctctctca 14737384  T
Q  194 aagctc 199  Q
    ||||||    
T  14737383 aagctc 14737378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 22010602 - 22010498
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  22010602 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 22010504  T
Q  194 aagctc 199  Q
    ||||||    
T  22010503 aagctc 22010498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 21801238 - 21801108
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  21801238 gatccttccaatgttgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 21801141  T
Q  166 ctcctttgtaatc-caagtttctctctctaagc 197  Q
    || ||||||| || |||||||||||||| ||||    
T  21801140 ctgctttgtattctcaagtttctctctcaaagc 21801108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 14742342 - 14742238
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    |||||||||||||| ||||||| |||||||||     
T  14742342 acccaaagtgattacaatgtttttcccaacccaagagacactctcaacaaagacacttaacccattggttccctcctttgttatccaag-ttctctctca 14742244  T
Q  194 aagctc 199  Q
    ||||||    
T  14742243 aagctc 14742238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 21356204 - 21356318
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| || ||||| | | |||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||  ||||| ||||||||||    
T  21356204 atgaaccctaaa-gaaaagacacaaaaggaagcttttgattcttccaatgatgaaatctcactacccaaggtgtttacaatg--tttcctaacccaagag 21356300  T
Q  131 accctctctacaaagaca 148  Q
    | |||| |||||||||||    
T  21356301 atcctcactacaaagaca 21356318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 18234334 - 18234409
Alignment:
Q  118 cccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||||||||||||| |||| ||||||||||||||||||||| || | ||||||||||||||||||||||| |||||    
T  18234334 cccaacccaagagatcctcactacaaagacactcaaccctaaagctacctcctttgtaatccaagtttctttctct 18234409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 18233038 - 18233096
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 115  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18233038 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 18233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 10077027 - 10076962
Alignment:
Q  128 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||| |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  10077027 gagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 10076962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 21272838 - 21272763
Alignment:
Q  115 tttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    |||| |||||||||||| |||| ||||||||||||||||||||| |||| || ||||||||||| |||||||||||    
T  21272838 tttcgcaacccaagagaacctcactacaaagacactcaaccctaaagttaccccctttgtaatcaaagtttctctc 21272763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 14521877 - 14522007
Alignment:
Q  69 atccttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||  ||||||||||  ||||||| |||  ||||||||||| | ||||||| |||| |    
T  14521877 atccttccaatggtgaaattctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctaactacaaagacattaaaccctaaagttac 14521974  T
Q  166 ctcctttgtaatcc-aagtttctctctctaagc 197  Q
    ||| |||||| ||| | ||||||||||| ||||    
T  14521975 ctcatttgtattcctaggtttctctctcaaagc 14522007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 31076830 - 31076706
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||||||||||||||||||| |||| |||||| |||||| |  |||| |||||||||  | | || ||||||||||||||||||||| ||||  ||    
T  31076830 gatcattccaatggtgaaatctcaatacctaaggtgtttacaaag--tttctcaacccaaggcaacgtcactacaaagacactcaaccctatagttatct 31076733  T
Q  168 cctttgtaat-ccaagtttctctctct 193  Q
    |||||||| | |||||||||| |||||    
T  31076732 cctttgtattcccaagtttctttctct 31076706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 4630145 - 4630203
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 115  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||    
T  4630145 aggaagcttttgatccttccaatggtgaaatctcactacccaatgtgtttaaaatgttt 4630203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 23896628 - 23896678
Alignment:
Q  143 aagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    |||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  23896628 aagacactcaactctaaagttacctcctttgtaatccaagtttctctctct 23896678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 10077062 - 10077026
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtga 104  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10077062 gatccttccaatggtcaaatctcactacccaaggtga 10077026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 6438680 - 6438723
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  6438680 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 6438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 28155475 - 28155432
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  28155475 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 28155432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 28184684 - 28184749
Alignment:
Q  94 acccaaggtgattacaatgttttt---cccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    ||||||||||||||| ||||||||   || |||||||||||| ||||| |||||||| ||||||||    
T  28184684 acccaaggtgattactatgtttttttcccaaacccaagagacactctcaacaaagaccctcaaccc 28184749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 5385799 - 5385881
Alignment:
Q  69 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaac 154  Q
    ||||||| |||||||||||||||||||  ||||||||| |||||||| |   |||||||  || |||| |||||||||||||||||    
T  5385799 atccttctaatggtgaaatctcactacttaaggtgattgcaatgtttctt--aacccaat-gaacctcactacaaagacactcaac 5385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 9296334 - 9296138
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacc 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  9296334 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacc 9296235  T
Q  125 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaa 221  Q
    ||| |||| || |||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  9296234 caatagacactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttttctctctaagctcttccaagctctcctccaaaaaa 9296138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 3491913 - 3492085
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  3491913 acaatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaatggtggaatctcactacccaaggtgtttacaatgttttttccaaccc 3492012  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagct 198  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3492013 aagagatcctcactacaaagacactcaaccctagatttccctcctttgtaatccaagtttctctctctaagct 3492085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 26 - 210
Target Start/End: Complemental strand, 11098860 - 11098674
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  || | || |||||||||||||||||||||||||||||||||||    
T  11098860 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgtactcctcactacccaaggtgattacaatgtttttcccaac 11098761  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactct 210  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11098760 ccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct 11098674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 14291652 - 14291839
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||    
T  14291652 acaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 14291751  T
Q  124 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctc 211  Q
    ||||||||| || ||||||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14291752 ccaagagacactatctacaaagacgctcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 14291839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 219
Target Start/End: Original strand, 25409842 - 25409985
Alignment:
Q  76 caatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta 175  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  25409842 caatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagtgttccctcctctgta 25409941  T
Q  176 atccaagtttctctctctaagctcttccaaactctccttcaaaa 219  Q
    |||||||||||||||||||||||||||||| |||| ||||||||    
T  25409942 atccaagtttctctctctaagctcttccaagctctacttcaaaa 25409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 40738995 - 40739158
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 125  Q
    |||||||||||||||||||||||||| | | || ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||    
T  40738995 acaatatgaaccctaaaagagaagacacaatagtaagcttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgttt--cccaaccc 40739092  T
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctct 191  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40739093 aagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctct 40739158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 190
Target Start/End: Complemental strand, 36757692 - 36757536
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  36757692 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 36757596  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    | |||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  36757595 atcctcactacaaagacactcaaccctaaagttacctcctttgtaattcaagtttctctc 36757536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 28259098 - 28258948
Alignment:
Q  41 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 140  Q
    ||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||| |||    
T  28259098 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaagatgtttacaatgttt--cccaacccaagagatcctcacta 28259001  T
Q  141 caaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
     ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  28259000 taaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 28258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 33528518 - 33528395
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  33528518 gatccttccaatggtgaaatctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 33528421  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||||||    
T  33528420 cctttgtaatccaagtttctctctct 33528395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 14698903 - 14698778
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||| |||| ||||||||||||||||||||| |||| |||    
T  14698903 gatccttccaatagtgaaatctcactacccaaggtgtttacaatgttt--cccaacccgagagatcctcactacaaagacactcaaccctaaagttacct 14698806  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||    
T  14698805 cctttgtaatccaagtttctctctctaa 14698778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 33118338 - 33118463
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||   |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  33118338 gatccttccaatggcgaaatctcactacccaaggtgtttacaatgttc--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 33118435  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||||||||||||||||||||    
T  33118436 cctttgtaatccaagtttctctctctaa 33118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 21630148 - 21630268
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||| ||| |||| |||    
T  21630148 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacactaaagttacct 21630245  T
Q  168 cctttgtaatccaagtttctctc 190  Q
    |||||||||||||||||||||||    
T  21630246 cctttgtaatccaagtttctctc 21630268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 34389054 - 34389174
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| |||||||| |||| |||    
T  34389054 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacacacaaccctaaagttacct 34389151  T
Q  168 cctttgtaatccaagtttctctc 190  Q
    |||||||||||||||||||||||    
T  34389152 cctttgtaatccaagtttctctc 34389174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 10445361 - 10445236
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| |||| ||||||||||| ||||||||| |||| |||    
T  10445361 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccgagagaacctcactacaaagacattcaaccctaaagttacct 10445264  T
Q  168 cctttgtaatccaagtttctctctctaa 195  Q
    ||||||||||| ||||||||||||||||    
T  10445263 cctttgtaatctaagtttctctctctaa 10445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 23078391 - 23078245
Alignment:
Q  42 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 141  Q
    |||||||||| | | |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||  |||   ||    
T  23078391 aagagaagacacaaaaggaagcttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagattctcatcac 23078294  T
Q  142 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 190  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  23078293 aaagacactcaacccaaaagttacctcctttgtaatccaagtttctctc 23078245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 13569532 - 13569655
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||  |||||||||||||| |||| ||||||||||||| ||||||| ||||  ||    
T  13569532 gatccttccaatggtgaaatctcactatccaaggtgtttataatgttt--cccaacccaagagatcctcactacaaagacacttaaccctaaagttatct 13569629  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    | ||||||||||||||||||||||||    
T  13569630 catttgtaatccaagtttctctctct 13569655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 8390084 - 8389920
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagcttta-gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc 124  Q
    |||||||||| |||||  ||||| || | ||||||||||||  ||| ||||||||||| ||||||||||| |||||||| |||||||||||  || ||||    
T  8390084 acaatatgaatcctaa--gagaaaacacaagaggaagctttttgattcttccaatggtaaaatctcactatccaaggtgtttacaatgttt--cctaacc 8389989  T
Q  125 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||| | || |||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||    
T  8389988 caagagatcatcactacaaagaccctcaaccctaaagttatctcctttgtaatccaagtttctctctct 8389920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 20522425 - 20522548
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||| ||| |||||||||||||||||||||||| || |||||||| ||  ||||||||||||||  ||| ||||||||||||||||||||| |||| |||    
T  20522425 gatcattcaaatggtgaaatctcactacccaagttgtttacaatgctt--cccaacccaagagatactcactacaaagacactcaaccctaaagttacct 20522522  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||| ||||||||||||||    
T  20522523 cctttgtaatctaagtttctctctct 20522548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 17865408 - 17865522
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||| | | ||||||||||||||||||||||| |||||||||||  |||||||||||||| | || ||||||||||||||||||||| |||| |||    
T  17865408 gatccttctatttgtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcttcactacaaagacactcaaccctaaagttacct 17865505  T
Q  168 cctttgtaatccaagtt 184  Q
    |||||||||||||||||    
T  17865506 cctttgtaatccaagtt 17865522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 8040267 - 8040397
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| | || |||||||||||||||||| || |||| |    
T  8040267 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacttcactacaaagacactcaaccataaagttac 8040364  T
Q  166 ctcctttgtaat-ccaagtttctctctctaagc 197  Q
    |||||||||| | ||||||||||||||| ||||    
T  8040365 ctcctttgtattaccaagtttctctctcaaagc 8040397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 10707146 - 10707023
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||| ||  ||||||||||| |||| ||||||||| | | ||||||| |||| |||    
T  10707146 gatccttctaatggtgaaatctaactacccaaggtgtttacaatgtttctc--aacccaagagatcctcactacaaagataataaaccctaaagttacct 10707049  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    ||||||||||| ||||||||||||||    
T  10707048 cctttgtaatctaagtttctctctct 10707023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 31056246 - 31056376
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  31056246 gatcctttcaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 31056343  T
Q  166 ctcctttgtaat-ccaagtttctctctctaagc 197  Q
    |||||||||| | ||||||||||||||| ||||    
T  31056344 ctcctttgtattcccaagtttctctctcaaagc 31056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 35397712 - 35397839
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||  ||| |||| ||||||||||| ||||||||| |||  |||    
T  35397712 gatccttccaatggtgaaatctcactacccaaggtaattacaatgtttt--ccaacccagaagaacctcactacaaagacaatcaaccctaaagtgacct 35397809  T
Q  168 cctttgta--atccaagtttctctctctaa 195  Q
    ||||||||   | |||||||||||||||||    
T  35397810 cctttgtatttttcaagtttctctctctaa 35397839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 34682227 - 34682097
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |    | ||||||| |||| ||||||||||||||||||||| |||| |||    
T  34682227 gatccttcaagtggtgaaatctcactacccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagacactcaaccctaaagttacct 34682128  T
Q  168 cctttgtaat-ccaagtttctctctctaagc 197  Q
    |||||||| | ||||||||||||||| ||||    
T  34682127 cctttgtattcccaagtttctctctcaaagc 34682097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 40015128 - 40015251
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||  ||||||||||||||||| ||||  |||||| ||||||||||||| |||| |||    
T  40015128 gatccttccaatggtgaaatctcactatccaatgtgtttacaatg--tttcccaacccaagagaacctcaatacaaa-acactcaaccctaaagttacct 40015224  T
Q  168 cctttgtaatcc-aagtttctctctct 193  Q
    ||||||||| || || |||||||||||    
T  40015225 cctttgtaaacctaaatttctctctct 40015251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 39483136 - 39483229
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagtt 163  Q
    |||| ||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||| |||| | ||||||||||||||||||| ||||    
T  39483136 gatcattccaatggtgaaatctcactacccaaggtgtttacaa--tatttcccaacccaagagatcctcacaacaaagacactcaaccctaaagtt 39483229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 2837923 - 2837816
Alignment:
Q  69 atccttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||  ||||||||  |||||| |||| ||||||||||||||||||||| |||| |    
T  2837923 atccttccaatggtgaaattctcactatccaaggtgtttacaatgttt--cccaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 2837826  T
Q  166 ctcctttgta 175  Q
    ||||||||||    
T  2837825 ctcctttgta 2837816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 2869582 - 2869481
Alignment:
Q  72 cttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctt 171  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||  ||||| ||||||| |||| |||||||||||||||||| || ||||  ||||||    
T  2869582 cttccaatggcgaaatctcactacccaatgtgtttacaatgtttt--ccaactcaagagaacctcactacaaagacactcaaccgtaaagttatctcctt 2869485  T
Q  172 tgta 175  Q
    ||||    
T  2869484 tgta 2869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 39811894 - 39811803
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt 184  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||| |   |||||||||||||  |||||||||    
T  39811894 acccaaggtgattacaatgtttttctcaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagtt 39811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 25398658 - 25398710
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa 78  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25398658 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa 25398710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 25403796 - 25403848
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa 78  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25403796 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa 25403848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 25407785 - 25407837
Alignment:
Q  26 acaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa 78  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25407785 acaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa 25407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 15903779 - 15903660
Alignment:
Q  73 ttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctccttt 172  Q
    ||||||||||||||||||| || |||| ||| ||||||||  ||||| ||||||||||| |||| ||||||||||| ||||||| |  ||| |||| |||    
T  15903779 ttccaatggtgaaatctcattatccaatgtgtttacaatg--tttcctaacccaagagaacctcactacaaagacattcaacccaaaggttacctcattt 15903682  T
Q  173 gt-aatccaagtttctctctct 193  Q
    || || |||| |||||||||||    
T  15903681 gtaaacccaaatttctctctct 15903660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 1344435 - 1344333
Alignment:
Q  73 ttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaacc-caagagaccctctctacaaagacactcaaccctagagttccctcct 170  Q
    ||||||||||||||| ||||||||| ||| || |||||||||||  ||||||| ||||||| |||| ||||||||||||||||||||| | || |||| |    
T  1344435 ttccaatggtgaaattctcactaccgaagatgtttacaatgttt--cccaacctcaagagaacctcactacaaagacactcaaccctaaaattacctcat 1344338  T
Q  171 ttgta 175  Q
    |||||    
T  1344337 ttgta 1344333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 42269617 - 42269702
Alignment:
Q  115 tttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctctctaagc 197  Q
    |||||||||||  |||||| |||| |||||||||||||||||| || |||| ||||||||||| | ||||||||||||||| ||||    
T  42269617 tttcccaaccctcaagagaacctcactacaaagacactcaaccttaaagttacctcctttgtattcccaagtttctctctcaaagc 42269702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 41586429 - 41586351
Alignment:
Q  84 aaatctcactacccaaggtgattacaa-tgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagtt 163  Q
    |||||||||||||||||||| |||||| ||||||  |||||||||||||  |||||  |||||||||||||||||| ||||    
T  41586429 aaatctcactacccaaggtgtttacaactgtttt--ccaacccaagagaagctctcaccaaagacactcaaccctaaagtt 41586351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 32246968 - 32247011
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  32246968 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 32247011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 3278176 - 3278307
Alignment:
Q  42 aagagaagacgctagaggaagcttta-gatccttccaatggtgaaatctcactacccaaggtgattac-aatgtttttcccaacccaagagaccctctct 139  Q
    ||||||| |||||| |||||| |||  ||||| ||| ||  ||||||||||||| |||||||| |||| ||||||||  |||||||||||||  |||||     
T  3278176 aagagaaaacgctaaaggaagttttttgatccgtcctataatgaaatctcactatccaaggtgtttacaaatgtttt--ccaacccaagagaatctctca 3278273  T
Q  140 acaaagacactcaaccctagagttccctcctttg 173  Q
     ||| || ||||||||||| |||| |||| ||||    
T  3278274 tcaacgatactcaaccctaaagttacctcatttg 3278307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 39284856 - 39284759
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 192  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  39284856 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 39284760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 11151788 - 11151864
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 173  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  11151788 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 11151864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 42362323 - 42362247
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 173  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  42362323 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 42362247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 8348 - 8188
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    ||||||||||||||||||||| | | ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  8348 atgaaccctaaaagagaagacacaaaaggaagcttttaatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 8251  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8250 atcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 36762 - 36603
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  36762 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagag 36666  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  36665 atcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 36603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 43891 - 43732
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||    
T  43891 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaaaag 43795  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  43794 atcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 43732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 133209 - 133050
Alignment:
Q  31 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 130  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  133209 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 133113  T
Q  131 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  133112 atcctcactacaaagaaactcaaccctaaagttccctcctttgtaatccaagtttctctctct 133050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 5888 - 6011
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||| |||| |||||||||||||||||| || |||| |||    
T  5888 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttg--ccaacccaagagatcctcactacaaagacactcaaccataaagttacct 5985  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
    |||||||||||||| |||||||||||    
T  5986 cctttgtaatccaattttctctctct 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 2697 - 2819
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 167  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||| |||| ||||||||| ||| ||||||| |||| |||    
T  2697 gatccttccaatggtgaaatctcactacgcaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagaaacttaaccctaaagttacct 2794  T
Q  168 cctttgtaatccaagtttctctctct 193  Q
      |||||||||||| |||||||||||    
T  2795 tttttgtaatccaa-tttctctctct 2819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 45374 - 45525
Alignment:
Q  41 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 140  Q
    ||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||| |||| |||    
T  45374 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcacaacccaagagatcctcacta 45471  T
Q  141 c-aaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    | ||||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  45472 caaaagacattcaaccctaaagttacctcctttgtaatccaagtttctctctct 45525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 85875 - 86006
Alignment:
Q  57 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 156  Q
    |||||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  85875 aggaagtttttgatccttccaatggtgaaatctcactacccaaagtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 85972  T
Q  157 tagagttccctcctttgtaatccaagtttctctc 190  Q
    || |||| ||||||||||||||||||||||||||    
T  85973 taaagttacctcctttgtaatccaagtttctctc 86006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 10934 - 11064
Alignment:
Q  68 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| |||||||||||||||||| || |||| |    
T  10934 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccataaagttac 11031  T
Q  166 ctcctttgtaatcc-aagtttctctctctaagc 197  Q
    |||||||||| ||| ||||||||||||| ||||    
T  11032 ctcctttgtattccaaagtttctctctcaaagc 11064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 17466 - 17577
Alignment:
Q  80 ggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc 179  Q
    |||||||||||||||||||||||| |||||||||||  ||||| |||||||| |  | |||||||||||||||||| || |||| |||||| ||||||||    
T  17466 ggtgaaatctcactacccaaggtgtttacaatgttt--cccaatccaagagatctccactacaaagacactcaaccgtaaagttacctcctatgtaatcc 17563  T
Q  180 aagtttctctctct 193  Q
    ||| ||||||||||    
T  17564 aaggttctctctct 17577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 23736 - 23859
Alignment:
Q  69 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 168  Q
    ||||||| |||||||| |||||||||||||||||||||||||  ||||| ||||||||| ||| |||| ||| |||||| ||||||| || |||| ||||    
T  23736 atccttctaatggtgacatctcactacccaaggtgattacaa--ttttttccaacccaatagaacctcactataaagacgctcaaccttaaagttacctc 23833  T
Q  169 ctttgtaatc-caagtttctctctct 193  Q
    | |||||||| |||||||||||||||    
T  23834 cattgtaatctcaagtttctctctct 23859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 34967 - 34863
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 193  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  34967 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 34869  T
Q  194 aagctc 199  Q
    ||||||    
T  34868 aagctc 34863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 3754 - 3663
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt 184  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||| |   |||||||||||||  |||||||||    
T  3754 acccaaggtgattacaatgtttttcctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagtt 3663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 9549 - 9514
Alignment:
Q  94 acccaaggtgattacaatgtttttcccaacccaaga 129  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9549 acccaaggtgattacaatgtttttcccaacctaaga 9514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 542 - 585
Alignment:
Q  95 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 138  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  542 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 5794 - 5728
Alignment:
Q  126 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctct 191  Q
    |||||| |||| ||||||||||||||||||||  |||| ||||||||||| ||| | ||||||||||    
T  5794 aagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcctaggtttctctct 5728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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